Pregenerated sensors for SMC3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024974Ensembl transcript IDs: ENSMUST00000025930.10
Found 124 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCTTTTCTAAATCTATGGCTTTGGTTAAGAGAGTCATATTAAATTaGCAATGTTGGAAGGGGTCTAGGGAGATGGCTCAGCAGTTAGGA | + |
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Preference number: 1 (lower is better) Translates to: CFSKSMALVKRVILN*QCWKGSREMAQQLG Trigger: TCCTAACTGCTGAGCCATCTCCCTAGACCCCTTCCAACATTGTCAATTTAATATGACTCTCTTAACCAAAGCCATAGATTTAGAAAAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| 3UTR TCA 90 bp | TTAACCAACAAGGAAACCGCATGGCTCACATTTGGTATCAGCATCTaGATCCCACATAAAACTGCTTTTCTAAATCTATGGCTTTGGTTA | + |
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Preference number: 1 (lower is better) Translates to: LTNKETAWLTFGISI*IPHKTAFLNLWLWL Trigger: TAACCAAAGCCATAGATTTAGAAAAGCAGTTTTATGTGGGATTCAGATGCTGATACCAAATGTGAGCCATGCGGTTTCCTTGTTGGTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| 3UTR-3UTR GCA 90 bp | AAGTGTCTCCTGGAACTGCCTGGCTTAACCAACAAGGAAACCGCATGGCTCACAAATGTTTCTAACCATTaGAAAGACCAAAGGCCACAT | + |
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Preference number: 2 (lower is better) Translates to: KCLLELPGLTNKETAWLTNVSNH*KDQRPH Trigger: ATGTGGCCTTTGGTCTTTGCAATGGTTAGAAACATT...TGTGAGCCATGCGGTTTCCTTGTTGGTTAAGCCAGGCAGTTCCAGGAGACACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| 3UTR-3UTR CCA 90 bp | ACAAACAAAATGCCCCAAAGACCTCATGGTGAATGTGGCCTCAGCAACAAAGCCTTACAGTTCTGGGTATaGACCACATTATTATACACA | + |
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Preference number: 2 (lower is better) Translates to: TNKMPQRPHGECGLSNKALQFWV*TTLLYT Trigger: TGTGTATAATAATGTGGTCCATACCCAGAACTGTAA...GGCTTTGTTGCTGAGGCCACATTCACCATGAGGTCTTTGGGGCATTTTGTTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| 3UTR TCA 72 bp | GCAGGGCTGTTAGCAGTCCTCAAACTCTGCACCACCTaGGGAACTTTTAAGCAAGGTGGTTGGGACAGCACT | + |
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Preference number: 3 (lower is better) Translates to: AGLLAVLKLCTT*GTFKQGGWDST Trigger: AGTGCTGTCCCAACCACCTTGCTTAAAAGTTCCTCAGGTGGTGCAGAGTTTGAGGACTGCTAACAGCCCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| 3UTR TCA 72 bp | AAGGAAACCGCATGGCTCACATTTGGTATCAGCATCTaGATCCCACATAAAACTGCTTTTCTAAATCTATGG | + |
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Preference number: 3 (lower is better) Translates to: KETAWLTFGISI*IPHKTAFLNLW Trigger: CCATAGATTTAGAAAAGCAGTTTTATGTGGGATTCAGATGCTGATACCAAATGTGAGCCATGCGGTTTCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS-3UTR TCA 90 bp | ACAAACAAAATGCCCCAAAGACCTCATGGTGAATGTGGCCTCAGCAACAAAGCCCCGGGCCAGCTGAGTTaGAACTTCCATGCTCCGACA | + |
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Preference number: 4 (lower is better) Translates to: TNKMPQRPHGECGLSNKAPGQLS*NFHAPT Trigger: TGTCGGAGCATGGAAGTTTCAACTCAGCTGGCCCGG...GGCTTTGTTGCTGAGGCCACATTCACCATGAGGTCTTTGGGGCATTTTGTTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS-3UTR TCA 90 bp | ACAAACAAAATGCCCCAAAGACCTCATGGTGAATGTGGCCTCAGCAACAAAGCCAAGGCCCGGGCCAGCTaGGTTGAAACTTCCATGCTC | + |
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Preference number: 4 (lower is better) Translates to: TNKMPQRPHGECGLSNKAKARAS*VETSML Trigger: GAGCATGGAAGTTTCAACTCAGCTGGCCCGGGCCTT...GGCTTTGTTGCTGAGGCCACATTCACCATGAGGTCTTTGGGGCATTTTGTTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS-3UTR TCA 90 bp | AAGTGTCTCCTGGAACTGCCTGGCTTAACCAACAAGGAAACCGCATGGCTCACAACGGCTTTTCTGTGCTaGGCATCCAAAGCTTGGTCG | + |
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Preference number: 4 (lower is better) Translates to: KCLLELPGLTNKETAWLTTAFLC*ASKAWS Trigger: CGACCAAGCTTTGGATGCTCAGCACAGAAAAGCCGT...TGTGAGCCATGCGGTTTCCTTGTTGGTTAAGCCAGGCAGTTCCAGGAGACACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS-3UTR CCA 90 bp | AAGTGTCTCCTGGAACTGCCTGGCTTAACCAACAAGGAAACCGCATGGCTCACATCTCTTGCATCCTGCTaGGCATCCCTTAGTTGTCTG | + |
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Preference number: 4 (lower is better) Translates to: KCLLELPGLTNKETAWLTSLASC*ASLSCL Trigger: CAGACAACTAAGGGATGCCCAGCAGGATGCAAGAGA...TGTGAGCCATGCGGTTTCCTTGTTGGTTAAGCCAGGCAGTTCCAGGAGACACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS-3UTR TCA 90 bp | GGTGGTTGGGACAGCACTTCCTTAAGATTGCCTGGGCTAGCCCAAGGAAAGACTCTCCATAATCATATCTaGCACGGCTTTTCTGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: GGWDSTSLRLPGLAQGKTLHNHI*HGFSVL Trigger: CAGCACAGAAAAGCCGTGTCAGATATGATTATGGAG...AGTCTTTCCTTGGGCTAGCCCAGGCAATCTTAAGGAAGTGCTGTCCCAACCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS-3UTR GCA 90 bp | AAGTGTCTCCTGGAACTGCCTGGCTTAACCAACAAGGAAACCGCATGGCTCACATCTTCTTCAACAGCATaGCTTGCCGGTTGGTCATCT | + |
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Preference number: 4 (lower is better) Translates to: KCLLELPGLTNKETAWLTSSSTA*LAGWSS Trigger: AGATGACCAACCGGCAAGGCATGCTGTTGAAGAAGA...TGTGAGCCATGCGGTTTCCTTGTTGGTTAAGCCAGGCAGTTCCAGGAGACACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS-3UTR TCA 90 bp | AAGTGTCTCCTGGAACTGCCTGGCTTAACCAACAAGGAAACCGCATGGCTCACACCATGCTCCGACAGATaGGTGTCTTTCCAAATACAT | + |
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Preference number: 4 (lower is better) Translates to: KCLLELPGLTNKETAWLTPCSDR*VSFQIH Trigger: ATGTATTTGGAAAGACACTCATCTGTCGGAGCATGG...TGTGAGCCATGCGGTTTCCTTGTTGGTTAAGCCAGGCAGTTCCAGGAGACACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS-3UTR CCA 90 bp | AAGTGTCTCCTGGAACTGCCTGGCTTAACCAACAAGGAAACCGCATGGCTCACATGCTCTGGACGAAGATaGCTGAATTCATCACTGAGA | + |
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Preference number: 4 (lower is better) Translates to: KCLLELPGLTNKETAWLTCSGRR*LNSSLR Trigger: TCTCAGTGATGAATTCAGCCATCTTCGTCCAGAGCA...TGTGAGCCATGCGGTTTCCTTGTTGGTTAAGCCAGGCAGTTCCAGGAGACACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS-3UTR CCA 90 bp | AAGTGTCTCCTGGAACTGCCTGGCTTAACCAACAAGGAAACCGCATGGCTCACATCTTTTGACGTAAACTaGCTTCCTCGACCCTGCTTT | + |
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Preference number: 4 (lower is better) Translates to: KCLLELPGLTNKETAWLTSFDVN*LPRPCF Trigger: AAAGCAGGGTCGAGGAAGCCAGTTTACGTCAAAAGA...TGTGAGCCATGCGGTTTCCTTGTTGGTTAAGCCAGGCAGTTCCAGGAGACACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| 3UTR CAA 72 bp | TTTAAGCAAGGTGGTTGGGACAGCACTTCCTTAAGATaGCCTGGGCTAGCCCAAGGAAAGACTTTAGCACTG | + |
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Preference number: 4 (lower is better) Translates to: FKQGGWDSTSLR*PGLAQGKTLAL Trigger: CAGTGCTAAAGTCTTTCCTTGGGCTAGCCCAGGCAATCTTAAGGAAGTGCTGTCCCAACCACCTTGCTTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS-3UTR GCA 90 bp | ACAAACAAAATGCCCCAAAGACCTCATGGTGAATGTGGCCTCAGCAACAAAGCCGCCGCTCTAAGAAGTTaGTGCTTCTTCTCAAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: TNKMPQRPHGECGLSNKAAALRS*CFFSRS Trigger: AGACCTTGAGAAGAAGCAGCAACTTCTTAGAGCGGC...GGCTTTGTTGCTGAGGCCACATTCACCATGAGGTCTTTGGGGCATTTTGTTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS-3UTR GCA 90 bp | CTGAACACAGTATGTATTAAGTGTCTCCTGGAACTGCCTGGCTTAACCAACAAGCCTCCTGAGAGCTGCTaGATTTCTCTCATCTCCCCT | + |
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Preference number: 4 (lower is better) Translates to: LNTVCIKCLLELPGLTNKPPESC*ISLISP Trigger: AGGGGAGATGAGAGAAATGCAGCAGCTCTCAGGAGG...CTTGTTGGTTAAGCCAGGCAGTTCCAGGAGACACTTAATACATACTGTGTTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS-3UTR TCA 90 bp | GGTGGTTGGGACAGCACTTCCTTAAGATTGCCTGGGCTAGCCCAAGGAAAGACTCATTATGTTTGGAGCTaGAGGGATCTACAATTGTTT | + |
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Preference number: 4 (lower is better) Translates to: GGWDSTSLRLPGLAQGKTHYVWS*RDLQLF Trigger: AAACAATTGTAGATCCCTTCAGCTCCAAACATAATG...AGTCTTTCCTTGGGCTAGCCCAGGCAATCTTAAGGAAGTGCTGTCCCAACCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS-3UTR TCA 90 bp | CTGAACACAGTATGTATTAAGTGTCTCCTGGAACTGCCTGGCTTAACCAACAAGTTGCTTCCCTGTAAATaGCACCCTGATCCCAACTCC | + |
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Preference number: 4 (lower is better) Translates to: LNTVCIKCLLELPGLTNKLLPCK*HPDPNS Trigger: GGAGTTGGGATCAGGGTGTCATTTACAGGGAAGCAA...CTTGTTGGTTAAGCCAGGCAGTTCCAGGAGACACTTAATACATACTGTGTTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS-3UTR TCA 90 bp | AAGTGTCTCCTGGAACTGCCTGGCTTAACCAACAAGGAAACCGCATGGCTCACAGTGATCACATCAATGTaGCTAACCTTATTTCTGAAC | + |
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Preference number: 4 (lower is better) Translates to: KCLLELPGLTNKETAWLTVITSM*LTLFLN Trigger: GTTCAGAAATAAGGTTAGTCACATTGATGTGATCAC...TGTGAGCCATGCGGTTTCCTTGTTGGTTAAGCCAGGCAGTTCCAGGAGACACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS-3UTR GCA 90 bp | GGTGGTTGGGACAGCACTTCCTTAAGATTGCCTGGGCTAGCCCAAGGAAAGACTTTGCATAAAAGAAGTTaGTTTTTCCAGAGCCATTTC | + |
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Preference number: 4 (lower is better) Translates to: GGWDSTSLRLPGLAQGKTLHKRS*FFQSHF Trigger: GAAATGGCTCTGGAAAAAGCAACTTCTTTTATGCAA...AGTCTTTCCTTGGGCTAGCCCAGGCAATCTTAAGGAAGTGCTGTCCCAACCACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS-3UTR GCA 90 bp | GGTGGTTGGGACAGCACTTCCTTAAGATTGCCTGGGCTAGCCCAAGGAAAGACTAGTTATTCATTACGATaGCATGGTAGCCATTTTGAA | + |
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Preference number: 4 (lower is better) Translates to: GGWDSTSLRLPGLAQGKTSYSLR*HGSHFE Trigger: TTCAAAATGGCTACCATGGCATCGTAATGAATAACT...AGTCTTTCCTTGGGCTAGCCCAGGCAATCTTAAGGAAGTGCTGTCCCAACCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS-3UTR TCA 90 bp | TTTACAGTTCTGGGTATGGACCACATTATTATACACATCTTCCAAGACAGCAAGGAGCACCTCGATGGCTaGCTTGATCACCTTCCAAAG | + |
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Preference number: 4 (lower is better) Translates to: FTVLGMDHIIIHIFQDSKEHLDG*LDHLPK Trigger: CTTTGGAAGGTGATCAAGTCAGCCATCGAGGTGCTC...CTTGCTGTCTTGGAAGATGTGTATAATAATGTGGTCCATACCCAGAACTGTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS-3UTR TCA 90 bp | ACAAACAAAATGCCCCAAAGACCTCATGGTGAATGTGGCCTCAGCAACAAAGCCAATAGCTTCAAGTTCTaGTGTTGTGGCAGTAAGAAC | + |
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Preference number: 4 (lower is better) Translates to: TNKMPQRPHGECGLSNKANSFKF*CCGSKN Trigger: GTTCTTACTGCCACAACATCAGAACTTGAAGCTATT...GGCTTTGTTGCTGAGGCCACATTCACCATGAGGTCTTTGGGGCATTTTGTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS-3UTR GCA 90 bp | ACAAACAAAATGCCCCAAAGACCTCATGGTGAATGTGGCCTCAGCAACAAAGCCCTTTCATCAGGGAGATaGTTTCTTCTTTCCGTTCAT | + |
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Preference number: 4 (lower is better) Translates to: TNKMPQRPHGECGLSNKALSSGR*FLLSVH Trigger: ATGAACGGAAAGAAGAAAGCATCTCCCTGATGAAAG...GGCTTTGTTGCTGAGGCCACATTCACCATGAGGTCTTTGGGGCATTTTGTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS-3UTR CCA 90 bp | CTGAACACAGTATGTATTAAGTGTCTCCTGGAACTGCCTGGCTTAACCAACAAGAGTTCCTGTTCTACTTaGTCCAAGCGTTTCCTCAGA | + |
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Preference number: 4 (lower is better) Translates to: LNTVCIKCLLELPGLTNKSSCST*SKRFLR Trigger: TCTGAGGAAACGCTTGGACCAAGTAGAACAGGAACT...CTTGTTGGTTAAGCCAGGCAGTTCCAGGAGACACTTAATACATACTGTGTTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS-3UTR CCA 90 bp | AAGTGTCTCCTGGAACTGCCTGGCTTAACCAACAAGGAAACCGCATGGCTCACACTTCTGTTTTGTCAATaGAATTGTCCAAATCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: KCLLELPGLTNKETAWLTLLFCQ*NCPNLL Trigger: CAGAAGATTTGGACAATTCCATTGACAAAACAGAAG...TGTGAGCCATGCGGTTTCCTTGTTGGTTAAGCCAGGCAGTTCCAGGAGACACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS-3UTR TCA 90 bp | CTGAACACAGTATGTATTAAGTGTCTCCTGGAACTGCCTGGCTTAACCAACAAGTACGTTGCTTTGGCATaGAGGTCTTTTCTGATTGCT | + |
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Preference number: 4 (lower is better) Translates to: LNTVCIKCLLELPGLTNKYVALA*RSFLIA Trigger: AGCAATCAGAAAAGACCTTCATGCCAAAGCAACGTA...CTTGTTGGTTAAGCCAGGCAGTTCCAGGAGACACTTAATACATACTGTGTTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS-3UTR TCA 90 bp | TTTACAGTTCTGGGTATGGACCACATTATTATACACATCTTCCAAGACAGCAAGGCAGGGTCGCATTTCTaGATGGCAAAGATGAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: FTVLGMDHIIIHIFQDSKAGSHF*MAKMRA Trigger: TGCTCTCATCTTTGCCATTCAGAAATGCGACCCTGC...CTTGCTGTCTTGGAAGATGTGTATAATAATGTGGTCCATACCCAGAACTGTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS-3UTR GCA 90 bp | TTTACAGTTCTGGGTATGGACCACATTATTATACACATCTTCCAAGACAGCAAGAACAAAGCCAATCGCTaGTCTGGACGAAGATGGCTG | + |
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Preference number: 4 (lower is better) Translates to: FTVLGMDHIIIHIFQDSKNKANR*SGRRWL Trigger: CAGCCATCTTCGTCCAGAGCAGCGATTGGCTTTGTT...CTTGCTGTCTTGGAAGATGTGTATAATAATGTGGTCCATACCCAGAACTGTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS-3UTR GCA 90 bp | TTTCTAACCATTGCAAAGACCAAAGGCCACATTTACACTAAGTTAGTCACAAACACCCAGCTCCTCCTCTaGCTTCCTAACGTCTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: FLTIAKTKGHIYTKLVTNTQLLL*LPNVFL Trigger: CAGAAAGACGTTAGGAAGGCAGAGGAGGAGCTGGGT...GTTTGTGACTAACTTAGTGTAAATGTGGCCTTTGGTCTTTGCAATGGTTAGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS-3UTR CCA 90 bp | TTTACAGTTCTGGGTATGGACCACATTATTATACACATCTTCCAAGACAGCAAGAGCCAATCGCTGCTCTaGACGAAGATGGCTGAATTC | + |
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Preference number: 4 (lower is better) Translates to: FTVLGMDHIIIHIFQDSKSQSLL*TKMAEF Trigger: GAATTCAGCCATCTTCGTCCAGAGCAGCGATTGGCT...CTTGCTGTCTTGGAAGATGTGTATAATAATGTGGTCCATACCCAGAACTGTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS-3UTR GCA 90 bp | TTTACAGTTCTGGGTATGGACCACATTATTATACACATCTTCCAAGACAGCAAGTTGTCTCTTGCATCCTaGTGGGCATCCCTTAGTTGT | + |
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Preference number: 4 (lower is better) Translates to: FTVLGMDHIIIHIFQDSKLSLAS*WASLSC Trigger: ACAACTAAGGGATGCCCAGCAGGATGCAAGAGACAA...CTTGCTGTCTTGGAAGATGTGTATAATAATGTGGTCCATACCCAGAACTGTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS-3UTR GCA 90 bp | CTGAACACAGTATGTATTAAGTGTCTCCTGGAACTGCCTGGCTTAACCAACAAGGTCCTTTGCTTAATCTaGTCTTGTCTTTCAGCACTA | + |
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Preference number: 4 (lower is better) Translates to: LNTVCIKCLLELPGLTNKVLCLI*SCLSAL Trigger: TAGTGCTGAAAGACAAGAGCAGATTAAGCAAAGGAC...CTTGTTGGTTAAGCCAGGCAGTTCCAGGAGACACTTAATACATACTGTGTTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS-3UTR GCA 90 bp | CAAACATCTATAATCAGACCCATGAGATCCAATACCTGTGTGTATGATGTAAACGTGGACTCCATAGCATaGAGACTTGCCTCCAAGCTT | + |
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Preference number: 4 (lower is better) Translates to: QTSIIRPMRSNTCVYDVNVDSIA*RLASKL Trigger: AAGCTTGGAGGCAAGTCTGCATGCTATGGAGTCCAC...GTTTACATCATACACACAGGTATTGGATCTCATGGGTCTGATTATAGATGTTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS-3UTR TCA 90 bp | CAAACATCTATAATCAGACCCATGAGATCCAATACCTGTGTGTATGATGTAAACAACAGCTTTAATCTCTaGGAATCTGGTGCCGTTGCC | + |
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Preference number: 4 (lower is better) Translates to: QTSIIRPMRSNTCVYDVNNSFNL*ESGAVA Trigger: GGCAACGGCACCAGATTCTCAGAGATTAAAGCTGTT...GTTTACATCATACACACAGGTATTGGATCTCATGGGTCTGATTATAGATGTTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS-3UTR TCA 90 bp | TTTACAGTTCTGGGTATGGACCACATTATTATACACATCTTCCAAGACAGCAAGCCTCGATGGCTGACTTaGTCACCTTCCAAAGTAATA | + |
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Preference number: 4 (lower is better) Translates to: FTVLGMDHIIIHIFQDSKPRWLT*SPSKVI Trigger: TATTACTTTGGAAGGTGATCAAGTCAGCCATCGAGG...CTTGCTGTCTTGGAAGATGTGTATAATAATGTGGTCCATACCCAGAACTGTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS-3UTR GCA 90 bp | CAAACATCTATAATCAGACCCATGAGATCCAATACCTGTGTGTATGATGTAAACAATGGCCTTTCCTGTTaGCGCTCTAAGAAGTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: QTSIIRPMRSNTCVYDVNNGLSC*RSKKLL Trigger: CAGCAACTTCTTAGAGCGGCAACAGGAAAGGCCATT...GTTTACATCATACACACAGGTATTGGATCTCATGGGTCTGATTATAGATGTTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS-3UTR CCA 90 bp | TTTCTAACCATTGCAAAGACCAAAGGCCACATTTACACTAAGTTAGTCACAAACTTCAGGCTCAGTGTCTaGTACTTCTCAAACGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: FLTIAKTKGHIYTKLVTNFRLSV*YFSNAS Trigger: GGAAGCGTTTGAGAAGTACCAGACACTGAGCCTGAA...GTTTGTGACTAACTTAGTGTAAATGTGGCCTTTGGTCTTTGCAATGGTTAGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS-3UTR TCA 90 bp | TTTACAGTTCTGGGTATGGACCACATTATTATACACATCTTCCAAGACAGCAAGACTTCAACAACTCATTaGTCTTTTCCCGTTTGCCCT | + |
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Preference number: 4 (lower is better) Translates to: FTVLGMDHIIIHIFQDSKTSTTH*SFPVCP Trigger: AGGGCAAACGGGAAAAGATCAATGAGTTGTTGAAGT...CTTGCTGTCTTGGAAGATGTGTATAATAATGTGGTCCATACCCAGAACTGTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS-3UTR TCA 90 bp | CAAACATCTATAATCAGACCCATGAGATCCAATACCTGTGTGTATGATGTAAACTCTTCCAGACTGAGTTaGGAAAGCAAATCCGTTCCT | + |
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Preference number: 4 (lower is better) Translates to: QTSIIRPMRSNTCVYDVNSSRLS*ESKSVP Trigger: AGGAACGGATTTGCTTTCTCAACTCAGTCTGGAAGA...GTTTACATCATACACACAGGTATTGGATCTCATGGGTCTGATTATAGATGTTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS-3UTR TCA 90 bp | CAAACATCTATAATCAGACCCATGAGATCCAATACCTGTGTGTATGATGTAAACTCTGATCTTCCAGACTaGGTTGAGAAAGCAAATCCG | + |
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Preference number: 4 (lower is better) Translates to: QTSIIRPMRSNTCVYDVNSDLPD*VEKANP Trigger: CGGATTTGCTTTCTCAACTCAGTCTGGAAGATCAGA...GTTTACATCATACACACAGGTATTGGATCTCATGGGTCTGATTATAGATGTTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS-3UTR GCA 90 bp | TTTCTAACCATTGCAAAGACCAAAGGCCACATTTACACTAAGTTAGTCACAAACAGAATCTGGTGCCGTTaGCATTTGGTTGATCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: FLTIAKTKGHIYTKLVTNRIWCR*HLVDLS Trigger: GGAAAGATCAACCAAATGGCAACGGCACCAGATTCT...GTTTGTGACTAACTTAGTGTAAATGTGGCCTTTGGTCTTTGCAATGGTTAGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS-3UTR GCA 90 bp | CAAACATCTATAATCAGACCCATGAGATCCAATACCTGTGTGTATGATGTAAACTCTCTGAGAATCTGGTaGCGTTGCCATTTGGTTGAT | + |
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Preference number: 4 (lower is better) Translates to: QTSIIRPMRSNTCVYDVNSLRIW*RCHLVD Trigger: ATCAACCAAATGGCAACGGCACCAGATTCTCAGAGA...GTTTACATCATACACACAGGTATTGGATCTCATGGGTCTGATTATAGATGTTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS-3UTR GCA 90 bp | TTTACAGTTCTGGGTATGGACCACATTATTATACACATCTTCCAAGACAGCAAGTCCTCGACCCTGCTTTaGATAAAGATCAGTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FTVLGMDHIIIHIFQDSKSSTLL*IKISSF Trigger: GAAAGAACTGATCTTTATGCAAAGCAGGGTCGAGGA...CTTGCTGTCTTGGAAGATGTGTATAATAATGTGGTCCATACCCAGAACTGTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
||
| CDS-3UTR GCA 90 bp | TTTCTAACCATTGCAAAGACCAAAGGCCACATTTACACTAAGTTAGTCACAAACTGGGTCTCTATCTGCTaGATTTGGTTCATCAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: FLTIAKTKGHIYTKLVTNWVSIC*IWFINW Trigger: CCAGTTGATGAACCAAATGCAGCAGATAGAGACCCA...GTTTGTGACTAACTTAGTGTAAATGTGGCCTTTGGTCTTTGCAATGGTTAGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
||
| CDS-3UTR CCA 90 bp | TTTACAGTTCTGGGTATGGACCACATTATTATACACATCTTCCAAGACAGCAAGCGCTCCATACTTTTCTaGAGCTCTTTAATTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FTVLGMDHIIIHIFQDSKRSILF*SSLIPA Trigger: AGCTGGAATTAAAGAGCTCCAGAAAAGTATGGAGCG...CTTGCTGTCTTGGAAGATGTGTATAATAATGTGGTCCATACCCAGAACTGTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
||
| CDS-3UTR GCA 90 bp | TTTACAGTTCTGGGTATGGACCACATTATTATACACATCTTCCAAGACAGCAAGTCCAACTTGGTCCTTTaGTTAATCTGCTCTTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FTVLGMDHIIIHIFQDSKSNLVL*LICSCL Trigger: AAGACAAGAGCAGATTAAGCAAAGGACCAAGTTGGA...CTTGCTGTCTTGGAAGATGTGTATAATAATGTGGTCCATACCCAGAACTGTAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
||
| CDS-3UTR GCA 90 bp | TTTACAGTTCTGGGTATGGACCACATTATTATACACATCTTCCAAGACAGCAAGTCTTTTAGCAGCAAGTaGTTGTTGTTCTGCATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FTVLGMDHIIIHIFQDSKSFSSK*LLFCIL Trigger: GAGAATGCAGAACAACAAGCACTTGCTGCTAAAAGA...CTTGCTGTCTTGGAAGATGTGTATAATAATGTGGTCCATACCCAGAACTGTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
||
| CDS-3UTR GCA 90 bp | CAAACATCTATAATCAGACCCATGAGATCCAATACCTGTGTGTATGATGTAAACGCTCTAAGAAGTTGCTaGTTCTTCTCAAGGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QTSIIRPMRSNTCVYDVNALRSC*FFSRSS Trigger: AGAAGACCTTGAGAAGAAGCAGCAACTTCTTAGAGC...GTTTACATCATACACACAGGTATTGGATCTCATGGGTCTGATTATAGATGTTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
||
| CDS-3UTR GCA 90 bp | CAAACATCTATAATCAGACCCATGAGATCCAATACCTGTGTGTATGATGTAAACTGTTGGGTCTCTATCTaGTGCATTTGGTTCATCAAC | + |
|
Preference number: 4 (lower is better) Translates to: QTSIIRPMRSNTCVYDVNCWVSI*CIWFIN Trigger: GTTGATGAACCAAATGCAGCAGATAGAGACCCAACA...GTTTACATCATACACACAGGTATTGGATCTCATGGGTCTGATTATAGATGTTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
||
| CDS-3UTR GCA 90 bp | TTTCTAACCATTGCAAAGACCAAAGGCCACATTTACACTAAGTTAGTCACAAACCTATCCAATTCCTCTTaGCGCTTTATCAGCTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FLTIAKTKGHIYTKLVTNLSNSS*RFISFS Trigger: GGAAAAGCTGATAAAGCGGCAAGAGGAATTGGATAG...GTTTGTGACTAACTTAGTGTAAATGTGGCCTTTGGTCTTTGCAATGGTTAGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
||
| CDS-3UTR CCA 90 bp | TTTCTAACCATTGCAAAGACCAAAGGCCACATTTACACTAAGTTAGTCACAAACGGTGCCGTTGCCATTTaGTTGATCTTTCCTTGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: FLTIAKTKGHIYTKLVTNGAVAI*LIFPCL Trigger: TAAACAAGGAAAGATCAACCAAATGGCAACGGCACC...GTTTGTGACTAACTTAGTGTAAATGTGGCCTTTGGTCTTTGCAATGGTTAGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
||
| CDS-3UTR CCA 90 bp | ATTTACAGTTCTGGGTATGGACCACATTATTATACACATCTTCCAAGACAGCAACTATTCCATTTAAAATaGCCTTTCCTGTTGCCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: IYSSGYGPHYYTHLPRQQLFHLK*PFLLPL Trigger: GAGCGGCAACAGGAAAGGCCATTTTAAATGGAATAG...TTGCTGTCTTGGAAGATGTGTATAATAATGTGGTCCATACCCAGAACTGTAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
||
| CDS-3UTR GCA 90 bp | ATTTACAGTTCTGGGTATGGACCACATTATTATACACATCTTCCAAGACAGCAATCTTTAACTCTGTGTTaGATTGCTCCAGTTTTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: IYSSGYGPHYYTHLPRQQSLTLC*IAPVFE Trigger: TTCGAAAACTGGAGCAATGCAACACAGAGTTAAAGA...TTGCTGTCTTGGAAGATGTGTATAATAATGTGGTCCATACCCAGAACTGTAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
||
| CDS-3UTR CCA 90 bp | CAAACATCTATAATCAGACCCATGAGATCCAATACCTGTGTGTATGATGTAAACTCTATCTGCTGCATTTaGTTCATCAACTGGTCAATT | + |
|
Preference number: 4 (lower is better) Translates to: QTSIIRPMRSNTCVYDVNSICCI*FINWSI Trigger: AATTGACCAGTTGATGAACCAAATGCAGCAGATAGA...GTTTACATCATACACACAGGTATTGGATCTCATGGGTCTGATTATAGATGTTTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
||
| CDS-3UTR CCA 90 bp | CAAACATCTATAATCAGACCCATGAGATCCAATACCTGTGTGTATGATGTAAACAATAAGGATTACTTCTaGAAAACCCAGCACTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: QTSIIRPMRSNTCVYDVNNKDYF*KTQHFQ Trigger: TTGAAAGTGCTGGGTTTTCCAGAAGTAATCCTTATT...GTTTACATCATACACACAGGTATTGGATCTCATGGGTCTGATTATAGATGTTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
||
| CDS-3UTR CAA 90 bp | ACAAACAAAATGCCCCAAAGACCTCATGGTGAATGTGGCCTCAGCAACAAAGCCCCCGGGCCAGCTGAGTaGAAACTTCCATGCTCCGAC | + |
|
Preference number: 5 (lower is better) Translates to: TNKMPQRPHGECGLSNKAPGPAE*KLPCSD Trigger: GTCGGAGCATGGAAGTTTCAACTCAGCTGGCCCGGG...GGCTTTGTTGCTGAGGCCACATTCACCATGAGGTCTTTGGGGCATTTTGTTTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
||
| CDS-3UTR CAA 90 bp | ACAAACAAAATGCCCCAAAGACCTCATGGTGAATGTGGCCTCAGCAACAAAGCCCCTCCATTTTGTCTCTaGCATCCTGCTGGGCATCCC | + |
|
Preference number: 5 (lower is better) Translates to: TNKMPQRPHGECGLSNKAPPFCL*HPAGHP Trigger: GGGATGCCCAGCAGGATGCAAGAGACAAAATGGAGG...GGCTTTGTTGCTGAGGCCACATTCACCATGAGGTCTTTGGGGCATTTTGTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
||
| CDS-3UTR CAA 90 bp | GGTGGTTGGGACAGCACTTCCTTAAGATTGCCTGGGCTAGCCCAAGGAAAGACTCAAGTCGAGACTTTCTaGTGTCGTAATAACCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GGWDSTSLRLPGLAQGKTQVETF*CRNNLQ Trigger: CTGGAGGTTATTACGACACAAGAAAGTCTCGACTTG...AGTCTTTCCTTGGGCTAGCCCAGGCAATCTTAAGGAAGTGCTGTCCCAACCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
||
| CDS CCA 90 bp | AACACGAGGACCTGTACCCTCATGCAACAAAGCCAATCGCTGCTCTaGACGAAGATGGCTGAATTCATCACTGAGAACAAACTGGATTGC | + |
|
Preference number: 5 (lower is better) Translates to: NTRTCTLMQQSQSLL*TKMAEFITENKLDC Trigger: GCAATCCAGTTTGTTCTCAGTGATGAATTCAGCCATCTTCGTCCAGAGCAGCGATTGGCTTTGTTGCATGAGGGTACAGGTCCTCGTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
||
| CDS-3UTR CAA 90 bp | GGTGGTTGGGACAGCACTTCCTTAAGATTGCCTGGGCTAGCCCAAGGAAAGACTTACTTCAACAACTCATaGATCTTTTCCCGTTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GGWDSTSLRLPGLAQGKTYFNNS*IFSRLP Trigger: GGGCAAACGGGAAAAGATCAATGAGTTGTTGAAGTA...AGTCTTTCCTTGGGCTAGCCCAGGCAATCTTAAGGAAGTGCTGTCCCAACCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
||
| CDS-3UTR CAA 90 bp | CTGAACACAGTATGTATTAAGTGTCTCCTGGAACTGCCTGGCTTAACCAACAAGTTCCGCTGTTCACTGTaGCCCGCCAGCTCATCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LNTVCIKCLLELPGLTNKFRCSL*PASSSC Trigger: ACAAGATGAGCTGGCGGGCAACAGTGAACAGCGGAA...CTTGTTGGTTAAGCCAGGCAGTTCCAGGAGACACTTAATACATACTGTGTTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
||
| CDS GCA 90 bp | GAAATAACACGAGGACCTGTACCCTCATGCAACAAAGCCAATCGCTaGTCTGGACGAAGATGGCTGAATTCATCACTGAGAACAAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: EITRGPVPSCNKANR*SGRRWLNSSLRTNW Trigger: CCAGTTTGTTCTCAGTGATGAATTCAGCCATCTTCGTCCAGAGCAGCGATTGGCTTTGTTGCATGAGGGTACAGGTCCTCGTGTTATTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
||
| CDS TCA 90 bp | CCTCTAGAGTGTGCAGGCGCTCTTCAATGTACTTCAACAACTCATTaGTCTTTTCCCGTTTGCCCTCTGTTTCTTTCATCAGGGAGATGC | + |
|
Preference number: 5 (lower is better) Translates to: PLECAGALQCTSTTH*SFPVCPLFLSSGRC Trigger: GCATCTCCCTGATGAAAGAAACAGAGGGCAAACGGGAAAAGATCAATGAGTTGTTGAAGTACATTGAAGAGCGCCTGCACACTCTAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
||
| CDS TCA 90 bp | TTCCAAAGTAATACAGTCCATAGTGAAGGCCCGGGCCAGCTGAGTTaGAACTTCCATGCTCCGACAGATGAGTGTCTTTCCAAATACATG | + |
|
Preference number: 5 (lower is better) Translates to: FQSNTVHSEGPGQLS*NFHAPTDECLSKYM Trigger: CATGTATTTGGAAAGACACTCATCTGTCGGAGCATGGAAGTTTCAACTCAGCTGGCCCGGGCCTTCACTATGGACTGTATTACTTTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
||
| CDS-3UTR CAA 90 bp | AAGTGTCTCCTGGAACTGCCTGGCTTAACCAACAAGGAAACCGCATGGCTCACATTCTTTAACTCTGTGTaGCATTGCTCCAGTTTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: KCLLELPGLTNKETAWLTFFNSV*HCSSFR Trigger: TCGAAAACTGGAGCAATGCAACACAGAGTTAAAGAA...TGTGAGCCATGCGGTTTCCTTGTTGGTTAAGCCAGGCAGTTCCAGGAGACACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
||
| CDS TCA 90 bp | GGATTTCATCATTCAGAGCGTCGACTCTTTTCTGATCTTCCAGACTaGGTTGAGAAAGCAAATCCGTTCCTAGCTCCGCTTTCAGTGACT | + |
|
Preference number: 5 (lower is better) Translates to: GFHHSERRLFSDLPD*VEKANPFLAPLSVT Trigger: AGTCACTGAAAGCGGAGCTAGGAACGGATTTGCTTTCTCAACTCAGTCTGGAAGATCAGAAAAGAGTCGACGCTCTGAATGATGAAATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
||
| CDS TCA 90 bp | AGCATGCCTTGCCGGTTGGTCATCTTCTCCAGCTCTTTAGTATCATaGTTTATGGCATCCATGTGTTCTTTCTCCATATTTTTCCAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: SMPCRLVIFSSSLVS*FMASMCSFSIFFQR Trigger: GCGCTGGAAAAATATGGAGAAAGAACACATGGATGCCATAAATCATGATACTAAAGAGCTGGAGAAGATGACCAACCGGCAAGGCATGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
||
| CDS-3UTR CAA 90 bp | CTGAACACAGTATGTATTAAGTGTCTCCTGGAACTGCCTGGCTTAACCAACAAGTGGTGCCGTTGCCATTaGGTTGATCTTTCCTTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LNTVCIKCLLELPGLTNKWCRCH*VDLSLF Trigger: AAACAAGGAAAGATCAACCAAATGGCAACGGCACCA...CTTGTTGGTTAAGCCAGGCAGTTCCAGGAGACACTTAATACATACTGTGTTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS-3UTR CAA 90 bp | CTGAACACAGTATGTATTAAGTGTCTCCTGGAACTGCCTGGCTTAACCAACAAGATCTTCCAGACTGAGTaGAGAAAGCAAATCCGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LNTVCIKCLLELPGLTNKIFQTE*RKQIRS Trigger: GGAACGGATTTGCTTTCTCAACTCAGTCTGGAAGAT...CTTGTTGGTTAAGCCAGGCAGTTCCAGGAGACACTTAATACATACTGTGTTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
||
| CDS-3UTR CAA 90 bp | ATTTACAGTTCTGGGTATGGACCACATTATTATACACATCTTCCAAGACAGCAAAGCATGCCTTGCCGGTaGGTCATCTTCTCCAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: IYSSGYGPHYYTHLPRQQSMPCR*VIFSSS Trigger: AGAGCTGGAGAAGATGACCAACCGGCAAGGCATGCT...TTGCTGTCTTGGAAGATGTGTATAATAATGTGGTCCATACCCAGAACTGTAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
||
| CDS-3UTR CAA 90 bp | ACAAACAAAATGCCCCAAAGACCTCATGGTGAATGTGGCCTCAGCAACAAAGCCATTCCAGCTTCTGTTTaGTCAATGGAATTGTCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: TNKMPQRPHGECGLSNKAIPASV*SMELSK Trigger: TTTGGACAATTCCATTGACAAAACAGAAGCTGGAAT...GGCTTTGTTGCTGAGGCCACATTCACCATGAGGTCTTTGGGGCATTTTGTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
||
| CDS GCA 90 bp | ATTCCATTTAAAATGGCCTTTCCTGTTGCCGCTCTAAGAAGTTGCTaGTTCTTCTCAAGGTCTTCTCTTTTAGCAGCAAGTGCTTGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: IPFKMAFPVAALRSC*FFSRSSLLAASACC Trigger: ACAACAAGCACTTGCTGCTAAAAGAGAAGACCTTGAGAAGAAGCAGCAACTTCTTAGAGCGGCAACAGGAAAGGCCATTTTAAATGGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
||
| CDS GCA 90 bp | TCTATTCCATTTAAAATGGCCTTTCCTGTTGCCGCTCTAAGAAGTTaGTGCTTCTTCTCAAGGTCTTCTCTTTTAGCAGCAAGTGCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: SIPFKMAFPVAALRS*CFFSRSSLLAASAC Trigger: ACAAGCACTTGCTGCTAAAAGAGAAGACCTTGAGAAGAAGCAGCAACTTCTTAGAGCGGCAACAGGAAAGGCCATTTTAAATGGAATAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
||
| CDS-3UTR CAA 90 bp | ATTTACAGTTCTGGGTATGGACCACATTATTATACACATCTTCCAAGACAGCAATGCCGCTCTAAGAAGTaGCTGCTTCTTCTCAAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: IYSSGYGPHYYTHLPRQQCRSKK*LLLLKV Trigger: GACCTTGAGAAGAAGCAGCAACTTCTTAGAGCGGCA...TTGCTGTCTTGGAAGATGTGTATAATAATGTGGTCCATACCCAGAACTGTAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
||
| CDS TCA 90 bp | TCATACACTCTAGTACCAGCTACTTCTCTCAACAGCTTTAATCTCTaGGAATCTGGTGCCGTTGCCATTTGGTTGATCTTTCCTTGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: SYTLVPATSLNSFNL*ESGAVAIWLIFPCL Trigger: TAAACAAGGAAAGATCAACCAAATGGCAACGGCACCAGATTCTCAGAGATTAAAGCTGTTGAGAGAAGTAGCTGGTACTAGAGTGTATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
||
| CDS-3UTR CAA 90 bp | ATTTACAGTTCTGGGTATGGACCACATTATTATACACATCTTCCAAGACAGCAAAGCAGCAAGTGCTTGTaGTTCTGCATTCTCCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: IYSSGYGPHYYTHLPRQQSSKCL*FCILLS Trigger: AGAGAGGAGAATGCAGAACAACAAGCACTTGCTGCT...TTGCTGTCTTGGAAGATGTGTATAATAATGTGGTCCATACCCAGAACTGTAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
||
| CDS-3UTR CAA 90 bp | CTGAACACAGTATGTATTAAGTGTCTCCTGGAACTGCCTGGCTTAACCAACAAGTGCTTTAAATTTTCTTaGTTGGGTCTCTATCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LNTVCIKCLLELPGLTNKCFKFS*LGLYLL Trigger: CAGCAGATAGAGACCCAACAAAGAAAATTTAAAGCA...CTTGTTGGTTAAGCCAGGCAGTTCCAGGAGACACTTAATACATACTGTGTTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
||
| CDS-3UTR CAA 90 bp | TTTCTAACCATTGCAAAGACCAAAGGCCACATTTACACTAAGTTAGTCACAAACAAGTTCCTGTTCTACTaGGTCCAAGCGTTTCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: FLTIAKTKGHIYTKLVTNKFLFY*VQAFPQ Trigger: CTGAGGAAACGCTTGGACCAAGTAGAACAGGAACTT...GTTTGTGACTAACTTAGTGTAAATGTGGCCTTTGGTCTTTGCAATGGTTAGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
||
| CDS GCA 90 bp | AGCTCATCTTGTAAATCCTTGGCTTTAAGCTCCAACTTGGTCCTTTaGTTAATCTGCTCTTGTCTTTCAGCACTAAGCTGTTCTTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SSSCKSLALSSNLVL*LICSCLSALSCSFS Trigger: AGAAAAAGAACAGCTTAGTGCTGAAAGACAAGAGCAGATTAAGCAAAGGACCAAGTTGGAGCTTAAAGCCAAGGATTTACAAGATGAGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
||
| CDS GCA 90 bp | CACAAGTATAGAAAGCTGGTTCACACTCAAAGTTATTCATTACGATaGCATGGTAGCCATTTTGAACATGCTGGTTTATACCTTTTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: HKYRKLVHTQSYSLR*HGSHFEHAGLYLFA Trigger: GGCGAAAAGGTATAAACCAGCATGTTCAAAATGGCTACCATGGCATCGTAATGAATAACTTTGAGTGTGAACCAGCTTTCTATACTTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
||
| CDS-3UTR CAA 90 bp | ATTTACAGTTCTGGGTATGGACCACATTATTATACACATCTTCCAAGACAGCAAGGGATCTACAATTGTTaGGTCTCGGTAACTTCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: IYSSGYGPHYYTHLPRQQGIYNC*VSVTSE Trigger: TTCCGAAGTTACCGAGACCAAACAATTGTAGATCCC...TTGCTGTCTTGGAAGATGTGTATAATAATGTGGTCCATACCCAGAACTGTAAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
||
| CDS-3UTR CAA 90 bp | TTTACAGTTCTGGGTATGGACCACATTATTATACACATCTTCCAAGACAGCAAGACGATGACATTATGTTaGGAGCTGAAGGGATCTACA | + |
|
Preference number: 5 (lower is better) Translates to: FTVLGMDHIIIHIFQDSKTMTLC*ELKGST Trigger: TGTAGATCCCTTCAGCTCCAAACATAATGTCATCGT...CTTGCTGTCTTGGAAGATGTGTATAATAATGTGGTCCATACCCAGAACTGTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
||
| CDS-3UTR CAA 90 bp | ATTTACAGTTCTGGGTATGGACCACATTATTATACACATCTTCCAAGACAGCAATCAATATCCTCCATTTaGTCTCTTGCATCCTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: IYSSGYGPHYYTHLPRQQSISSI*SLASCW Trigger: CCAGCAGGATGCAAGAGACAAAATGGAGGATATTGA...TTGCTGTCTTGGAAGATGTGTATAATAATGTGGTCCATACCCAGAACTGTAAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
||
| CDS-3UTR CAA 90 bp | TTTCTAACCATTGCAAAGACCAAAGGCCACATTTACACTAAGTTAGTCACAAACCTCCAACTTGGTCCTTaGCTTAATCTGCTCTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: FLTIAKTKGHIYTKLVTNLQLGP*LNLLLS Trigger: AGACAAGAGCAGATTAAGCAAAGGACCAAGTTGGAG...GTTTGTGACTAACTTAGTGTAAATGTGGCCTTTGGTCTTTGCAATGGTTAGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
||
| CDS-3UTR CAA 90 bp | TTTACAGTTCTGGGTATGGACCACATTATTATACACATCTTCCAAGACAGCAAGTTCCTCGACCCTGCTTaGCATAAAGATCAGTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: FTVLGMDHIIIHIFQDSKFLDPA*HKDQFF Trigger: AAAGAACTGATCTTTATGCAAAGCAGGGTCGAGGAA...CTTGCTGTCTTGGAAGATGTGTATAATAATGTGGTCCATACCCAGAACTGTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
||
| CDS-3UTR CAA 90 bp | TTTCTAACCATTGCAAAGACCAAAGGCCACATTTACACTAAGTTAGTCACAAACTTTAGCAGCAAGTGCTaGTTGTTCTGCATTCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: FLTIAKTKGHIYTKLVTNFSSKC*LFCILL Trigger: GAGGAGAATGCAGAACAACAAGCACTTGCTGCTAAA...GTTTGTGACTAACTTAGTGTAAATGTGGCCTTTGGTCTTTGCAATGGTTAGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
||
| CDS-3UTR CAA 90 bp | TTTACAGTTCTGGGTATGGACCACATTATTATACACATCTTCCAAGACAGCAAGAACCGGTTGTCCGAATaGTCAAAAATGATTTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: FTVLGMDHIIIHIFQDSKNRLSE*SKMIST Trigger: TGTGGAAATCATTTTTGACAATTCGGACAACCGGTT...CTTGCTGTCTTGGAAGATGTGTATAATAATGTGGTCCATACCCAGAACTGTAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
||
| CDS-3UTR CAA 90 bp | TTTACAGTTCTGGGTATGGACCACATTATTATACACATCTTCCAAGACAGCAAGTCAATTGGTAACCGGTaGTCCGAATTGTCAAAAATG | + |
|
Preference number: 5 (lower is better) Translates to: FTVLGMDHIIIHIFQDSKSIGNR*SELSKM Trigger: CATTTTTGACAATTCGGACAACCGGTTACCAATTGA...CTTGCTGTCTTGGAAGATGTGTATAATAATGTGGTCCATACCCAGAACTGTAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS-3UTR CAA 90 bp | TTTCTAACCATTGCAAAGACCAAAGGCCACATTTACACTAAGTTAGTCACAAACTTGCTTAATCTGCTCTaGTCTTTCAGCACTAAGCTG | + |
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Preference number: 5 (lower is better) Translates to: FLTIAKTKGHIYTKLVTNLLNLL*SFSTKL Trigger: CAGCTTAGTGCTGAAAGACAAGAGCAGATTAAGCAA...GTTTGTGACTAACTTAGTGTAAATGTGGCCTTTGGTCTTTGCAATGGTTAGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS-3UTR CAA 90 bp | CAAACATCTATAATCAGACCCATGAGATCCAATACCTGTGTGTATGATGTAAACTCTCTCACATCTAACTaGTTAAGAGGCAGGAAAGTC | + |
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Preference number: 5 (lower is better) Translates to: QTSIIRPMRSNTCVYDVNSLTSN*LRGRKV Trigger: GACTTTCCTGCCTCTTAACAAGTTAGATGTGAGAGA...GTTTACATCATACACACAGGTATTGGATCTCATGGGTCTGATTATAGATGTTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS-3UTR CAA 90 bp | CAAACATCTATAATCAGACCCATGAGATCCAATACCTGTGTGTATGATGTAAACTTGTCAAATCTGGGATaGTACCTCAGCTTACTGATC | + |
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Preference number: 5 (lower is better) Translates to: QTSIIRPMRSNTCVYDVNLSNLG*YLSLLI Trigger: GATCAGTAAGCTGAGGTACAATCCCAGATTTGACAA...GTTTACATCATACACACAGGTATTGGATCTCATGGGTCTGATTATAGATGTTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS-3UTR CAA 90 bp | ATTTACAGTTCTGGGTATGGACCACATTATTATACACATCTTCCAAGACAGCAACTCTATCTGCTGCATTaGGTTCATCAACTGGTCAAT | + |
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Preference number: 5 (lower is better) Translates to: IYSSGYGPHYYTHLPRQQLYLLH*VHQLVN Trigger: ATTGACCAGTTGATGAACCAAATGCAGCAGATAGAG...TTGCTGTCTTGGAAGATGTGTATAATAATGTGGTCCATACCCAGAACTGTAAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS-3UTR CAA 90 bp | TTTCTAACCATTGCAAAGACCAAAGGCCACATTTACACTAAGTTAGTCACAAACTCATCTTGTAAATCCTaGGCTTTAAGCTCCAACTTG | + |
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Preference number: 5 (lower is better) Translates to: FLTIAKTKGHIYTKLVTNSSCKS*ALSSNL Trigger: CAAGTTGGAGCTTAAAGCCAAGGATTTACAAGATGA...GTTTGTGACTAACTTAGTGTAAATGTGGCCTTTGGTCTTTGCAATGGTTAGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS TCA 90 bp | TTCATCACATCATTTTTCGTGACCATCTTCTTATCTAGGAAATACTaGTCCTTTTTGGCACCAATAACTCTTCGAAGTGAAACTTCCTCT | + |
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Preference number: 5 (lower is better) Translates to: FITSFFVTIFLSRKY*SFLAPITLRSETSS Trigger: AGAGGAAGTTTCACTTCGAAGAGTTATTGGTGCCAAAAAGGATCAGTATTTCCTAGATAAGAAGATGGTCACGAAAAATGATGTGATGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS GCA 90 bp | ATCCTGATCCAATTTATTATATTGCTCCAGATTTTTCTCTTTATTTaGCTCGGTATCCTCCAAATCCTTGTGAATAGCAGCAATCTGTCT | + |
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Preference number: 5 (lower is better) Translates to: ILIQFIILLQIFLFI*LGILQILVNSSNLS Trigger: AGACAGATTGCTGCTATTCACAAGGATTTGGAGGATACCGAGGCAAATAAAGAGAAAAATCTGGAGCAATATAATAAATTGGATCAGGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS-3UTR CAA 90 bp | CAAACATCTATAATCAGACCCATGAGATCCAATACCTGTGTGTATGATGTAAACACATGTTTGAAAGCTTaGTCAAATCTGGGATTGTAC | + |
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Preference number: 5 (lower is better) Translates to: QTSIIRPMRSNTCVYDVNTCLKA*SNLGLY Trigger: GTACAATCCCAGATTTGACAAAGCTTTCAAACATGT...GTTTACATCATACACACAGGTATTGGATCTCATGGGTCTGATTATAGATGTTTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS CCA 90 bp | AATTTTCTTTGTTGGGTCTCTATCTGCTGCATTTGGTTCATCAACTaGTCAATTTCATTATTAATCCTTTCAATGTTCCTGCGTAGGTTT | + |
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Preference number: 5 (lower is better) Translates to: NFLCWVSICCIWFIN*SISLLILSMFLRRF Trigger: AAACCTACGCAGGAACATTGAAAGGATTAATAATGAAATTGACCAGTTGATGAACCAAATGCAGCAGATAGAGACCCAACAAAGAAAATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS CCA 72 bp | TCCAGTTTTCGAAACAACTGCTTCAGGCTCAGTGTCTaGTACTTCTCAAACGCTTCCTGGGGGAGGGACCCC | + |
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Preference number: 6 (lower is better) Translates to: SSFRNNCFRLSV*YFSNASWGRDP Trigger: GGGGTCCCTCCCCCAGGAAGCGTTTGAGAAGTACCAGACACTGAGCCTGAAGCAGTTGTTTCGAAAACTGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS TCA 72 bp | AATACAGTCCATAGTGAAGGCCCGGGCCAGCTGAGTTaGAACTTCCATGCTCCGACAGATGAGTGTCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: NTVHSEGPGQLS*NFHAPTDECLS Trigger: GGAAAGACACTCATCTGTCGGAGCATGGAAGTTTCAACTCAGCTGGCCCGGGCCTTCACTATGGACTGTATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS GCA 72 bp | CGAGGACCTGTACCCTCATGCAACAAAGCCAATCGCTaGTCTGGACGAAGATGGCTGAATTCATCACTGAGA | + |
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Preference number: 6 (lower is better) Translates to: RGPVPSCNKANR*SGRRWLNSSLR Trigger: TCTCAGTGATGAATTCAGCCATCTTCGTCCAGAGCAGCGATTGGCTTTGTTGCATGAGGGTACAGGTCCTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS CAA 90 bp | GCCCACGATGACATTATGTTTGGAGCTGAAGGGATCTACAATTGTTaGGTCTCGGTAACTTCGGAAGCCCTGGATGATCACCTGCTTGAT | + |
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Preference number: 6 (lower is better) Translates to: AHDDIMFGAEGIYNC*VSVTSEALDDHLLD Trigger: ATCAAGCAGGTGATCATCCAGGGCTTCCGAAGTTACCGAGACCAAACAATTGTAGATCCCTTCAGCTCCAAACATAATGTCATCGTGGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS TCA 72 bp | CATTCAGAGCGTCGACTCTTTTCTGATCTTCCAGACTaGGTTGAGAAAGCAAATCCGTTCCTAGCTCCGCTT | + |
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Preference number: 6 (lower is better) Translates to: HSERRLFSDLPD*VEKANPFLAPL Trigger: AAGCGGAGCTAGGAACGGATTTGCTTTCTCAACTCAGTCTGGAAGATCAGAAAAGAGTCGACGCTCTGAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS CAA 72 bp | TTCAGTTCTCTAACCTGGCGCTCAATATCCTCCATTTaGTCTCTTGCATCCTGCTGGGCATCCCTTAGTTGT | + |
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Preference number: 6 (lower is better) Translates to: FSSLTWRSISSI*SLASCWASLSC Trigger: ACAACTAAGGGATGCCCAGCAGGATGCAAGAGACAAAATGGAGGATATTGAGCGCCAGGTTAGAGAACTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS CAA 90 bp | TCCTCTAGAGTGTGCAGGCGCTCTTCAATGTACTTCAACAACTCATaGATCTTTTCCCGTTTGCCCTCTGTTTCTTTCATCAGGGAGATG | + |
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Preference number: 6 (lower is better) Translates to: SSRVCRRSSMYFNNS*IFSRLPSVSFIREM Trigger: CATCTCCCTGATGAAAGAAACAGAGGGCAAACGGGAAAAGATCAATGAGTTGTTGAAGTACATTGAAGAGCGCCTGCACACTCTAGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS TCA 72 bp | AGCTCCATAATCATATCTGACACGGCTTTTCTGTGCTaGGCATCCAAAGCTTGGTCGATCTCATCAAACAGG | + |
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Preference number: 6 (lower is better) Translates to: SSIIISDTAFLC*ASKAWSISSNR Trigger: CCTGTTTGATGAGATCGACCAAGCTTTGGATGCTCAGCACAGAAAAGCCGTGTCAGATATGATTATGGAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS CCA 72 bp | TCATGCAACAAAGCCAATCGCTGCTCTGGACGAAGATaGCTGAATTCATCACTGAGAACAAACTGGATTGCA | + |
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Preference number: 6 (lower is better) Translates to: SCNKANRCSGRR*LNSSLRTNWIA Trigger: TGCAATCCAGTTTGTTCTCAGTGATGAATTCAGCCATCTTCGTCCAGAGCAGCGATTGGCTTTGTTGCATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS CAA 72 bp | GACATTATGTTTGGAGCTGAAGGGATCTACAATTGTTaGGTCTCGGTAACTTCGGAAGCCCTGGATGATCAC | + |
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Preference number: 6 (lower is better) Translates to: DIMFGAEGIYNC*VSVTSEALDDH Trigger: GTGATCATCCAGGGCTTCCGAAGTTACCGAGACCAAACAATTGTAGATCCCTTCAGCTCCAAACATAATGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS CAA 72 bp | TTTCCAGAGCCATTTCTGCCCACGATGACATTATGTTaGGAGCTGAAGGGATCTACAATTGTTTGGTCTCGG | + |
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Preference number: 6 (lower is better) Translates to: FPEPFLPTMTLC*ELKGSTIVWSR Trigger: CCGAGACCAAACAATTGTAGATCCCTTCAGCTCCAAACATAATGTCATCGTGGGCAGAAATGGCTCTGGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS CAA 72 bp | TTATTAATCCTTTCAATGTTCCTGCGTAGGTTTTCATaGAGCTTAGCCTCCAGCTCACCCAGCTCCTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: LLILSMFLRRFS*SLASSSPSSSS Trigger: AGAGGAGGAGCTGGGTGAGCTGGAGGCTAAGCTCAATGAAAACCTACGCAGGAACATTGAAAGGATTAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS GCA 72 bp | AAAATGGCCTTTCCTGTTGCCGCTCTAAGAAGTTGCTaGTTCTTCTCAAGGTCTTCTCTTTTAGCAGCAAGT | + |
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Preference number: 6 (lower is better) Translates to: KMAFPVAALRSC*FFSRSSLLAAS Trigger: ACTTGCTGCTAAAAGAGAAGACCTTGAGAAGAAGCAGCAACTTCTTAGAGCGGCAACAGGAAAGGCCATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS CAA 72 bp | GTGTGCAGGCGCTCTTCAATGTACTTCAACAACTCATaGATCTTTTCCCGTTTGCCCTCTGTTTCTTTCATC | + |
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Preference number: 6 (lower is better) Translates to: VCRRSSMYFNNS*IFSRLPSVSFI Trigger: GATGAAAGAAACAGAGGGCAAACGGGAAAAGATCAATGAGTTGTTGAAGTACATTGAAGAGCGCCTGCACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS CAA 72 bp | TGCCTCTCTTTTAATAAACGTTTCCGCTGTTCACTGTaGCCCGCCAGCTCATCTTGTAAATCCTTGGCTTTA | + |
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Preference number: 6 (lower is better) Translates to: CLSFNKRFRCSL*PASSSCKSLAL Trigger: TAAAGCCAAGGATTTACAAGATGAGCTGGCGGGCAACAGTGAACAGCGGAAACGTTTATTAAAAGAGAGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS TCA 72 bp | TGTGCAGGCGCTCTTCAATGTACTTCAACAACTCATTaGTCTTTTCCCGTTTGCCCTCTGTTTCTTTCATCA | + |
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Preference number: 6 (lower is better) Translates to: CAGALQCTSTTH*SFPVCPLFLSS Trigger: TGATGAAAGAAACAGAGGGCAAACGGGAAAAGATCAATGAGTTGTTGAAGTACATTGAAGAGCGCCTGCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS GCA 72 bp | TTTAAAATGGCCTTTCCTGTTGCCGCTCTAAGAAGTTaGTGCTTCTTCTCAAGGTCTTCTCTTTTAGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: FKMAFPVAALRS*CFFSRSSLLAA Trigger: TGCTGCTAAAAGAGAAGACCTTGAGAAGAAGCAGCAACTTCTTAGAGCGGCAACAGGAAAGGCCATTTTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS CCA 72 bp | GTTACCAGCAGTGACTTCCACACAAGTATAGAAAGCTaGTTCACACTCAAAGTTATTCATTACGATGCCATG | + |
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Preference number: 6 (lower is better) Translates to: VTSSDFHTSIES*FTLKVIHYDAM Trigger: CATGGCATCGTAATGAATAACTTTGAGTGTGAACCAGCTTTCTATACTTGTGTGGAAGTCACTGCTGGTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS CAA 90 bp | GAAACTTCCATGCTCCGACAGATGAGTGTCTTTCCAAATACATGTTaGAAAGCTTTGTCAAATCTGGGATTGTACCTCAGCTTACTGATC | + |
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Preference number: 6 (lower is better) Translates to: ETSMLRQMSVFPNTC*KALSNLGLYLSLLI Trigger: GATCAGTAAGCTGAGGTACAATCCCAGATTTGACAAAGCTTTCAAACATGTATTTGGAAAGACACTCATCTGTCGGAGCATGGAAGTTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS CAA 90 bp | CAGCGCTCCATACTTTTCTGGAGCTCTTTAATTCCAGCTTCTGTTTaGTCAATGGAATTGTCCAAATCTTCTGATCTTGCCATAGTATCT | + |
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Preference number: 6 (lower is better) Translates to: QRSILFWSSLIPASV*SMELSKSSDLAIVS Trigger: AGATACTATGGCAAGATCAGAAGATTTGGACAATTCCATTGACAAAACAGAAGCTGGAATTAAAGAGCTCCAGAAAAGTATGGAGCGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS GCA 72 bp | AAGCTACGTTGCTTTGGCATGAAGGTCTTTTCTGATTaGTGTCTCTTCTCTTTTAGCATCTTCATCTCTGAT | + |
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Preference number: 6 (lower is better) Translates to: KLRCFGMKVFSD*CLFSFSIFISD Trigger: ATCAGAGATGAAGATGCTAAAAGAGAAGAGACAGCAATCAGAAAAGACCTTCATGCCAAAGCAACGTAGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS CAA 90 bp | ATGCTCCGACAGATGAGTGTCTTTCCAAATACATGTTTGAAAGCTTaGTCAAATCTGGGATTGTACCTCAGCTTACTGATCATAGGAATA | + |
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Preference number: 6 (lower is better) Translates to: MLRQMSVFPNTCLKA*SNLGLYLSLLIIGI Trigger: TATTCCTATGATCAGTAAGCTGAGGTACAATCCCAGATTTGACAAAGCTTTCAAACATGTATTTGGAAAGACACTCATCTGTCGGAGCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS CAA 72 bp | CAGATGAGTGTCTTTCCAAATACATGTTTGAAAGCTTaGTCAAATCTGGGATTGTACCTCAGCTTACTGATC | + |
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Preference number: 6 (lower is better) Translates to: QMSVFPNTCLKA*SNLGLYLSLLI Trigger: GATCAGTAAGCTGAGGTACAATCCCAGATTTGACAAAGCTTTCAAACATGTATTTGGAAAGACACTCATCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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| CDS TCA 72 bp | AGTTCTTCAACTCGAGCTTTGACTTCATTGAGATCCTaGTCCAATTTATTATATTGCTCCAGATTTTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: SSSTRALTSLRS*SNLLYCSRFFS Trigger: AGAGAAAAATCTGGAGCAATATAATAAATTGGATCAGGATCTCAATGAAGTCAAAGCTCGAGTTGAAGAACT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025930.10 |
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