Pregenerated sensors for SMC1A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041133Ensembl transcript IDs: ENSMUST00000045312.6, ENSMUST00000145518.8
Found 284 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTCTGGAACAGGGTGCCATCCAACGCCACTGTCTTGTGGCGTTGGTaGCCTCCAAAGGCAATGCGTCGAGCATCCTCCACATTATCACAA | + |
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Preference number: 1 (lower is better) Translates to: FWNRVPSNATVLWRW*PPKAMRRASSTLSQ Trigger: TTGTGATAATGTGGAGGATGCTCGACGCATTGCCTTTGGAGGTCACCAACGCCACAAGACAGTGGCGTTGGATGGCACCCTGTTCCAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
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| 3UTR GCA 90 bp | CTCCACTTCGTTGTGGTAGAGTTTAAAGAGCTGCAACTGTACCTGTaGTCGTACTACCTCATCCTTCAGGCGCTGATAGCGGTCCGCCTC | + |
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Preference number: 1 (lower is better) Translates to: LHFVVVEFKELQLYL*SYYLILQALIAVRL Trigger: GAGGCGGACCGCTATCAGCGCCTGAAGGATGAGGTAGTACGAGCACAGGTACAGTTGCAGCTCTTTAAACTCTACCACAACGAAGTGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
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| 3UTR GCA 90 bp | CATCCAACGCCACTGTCTTGTGGCGTTGGTGACCTCCAAAGGCAATaGGTCGAGCATCCTCCACATTATCACAAACAAGGGCATTGCCAC | + |
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Preference number: 1 (lower is better) Translates to: HPTPLSCGVGDLQRQ*VEHPPHYHKQGHCH Trigger: GTGGCAATGCCCTTGTTTGTGATAATGTGGAGGATGCTCGACGCATTGCCTTTGGAGGTCACCAACGCCACAAGACAGTGGCGTTGGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
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| 3UTR GCA 90 bp | ATACACAGAGCCAGGGTAGAGACGCTTGATGCTTTCCATTATTTCTaGCTTTCGCTGCTGGCGGCTACTCTCCTGTCGGTCAATTCGTGC | + |
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Preference number: 1 (lower is better) Translates to: IHRARVETLDAFHYF*LSLLAATLLSVNSC Trigger: GCACGAATTGACCGACAGGAGAGTAGCCGCCAGCAGCGAAAGGCAGAAATAATGGAAAGCATCAAGCGTCTCTACCCTGGCTCTGTGTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
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| 3UTR TCA 90 bp | GGTAGTCAAGAGGCAAGAAGGTCTCAGGCTCTCCACGTTGCTCCTTaGTATACTGAATACAGTCCCGACCTGTCTTCTCTGAGTCTACAA | + |
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Preference number: 1 (lower is better) Translates to: GSQEARRSQALHVAP*YTEYSPDLSSLSLQ Trigger: TTGTAGACTCAGAGAAGACAGGTCGGGACTGTATTCAGTATATCAAGGAGCAACGTGGAGAGCCTGAGACCTTCTTGCCTCTTGACTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
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| 3UTR TCA 90 bp | AGAGGCAAGAAGGTCTCAGGCTCTCCACGTTGCTCCTTGATATACTaGATACAGTCCCGACCTGTCTTCTCTGAGTCTACAATAATAGCA | + |
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Preference number: 1 (lower is better) Translates to: RGKKVSGSPRCSLIY*IQSRPVFSESTIIA Trigger: TGCTATTATTGTAGACTCAGAGAAGACAGGTCGGGACTGTATTCAGTATATCAAGGAGCAACGTGGAGAGCCTGAGACCTTCTTGCCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
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| 3UTR TCA 90 bp | ATAATAGCATCCATGTTCTTCCCTAAAACCTTGGTCACAGCAATCTaGTACTTCTTTTGTGTAGGCTGGCAGAGGTCAATGAGGCGGCCA | + |
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Preference number: 1 (lower is better) Translates to: IIASMFFPKTLVTAI*YFFCVGWQRSMRRP Trigger: TGGCCGCCTCATTGACCTCTGCCAGCCTACACAAAAGAAGTATCAGATTGCTGTGACCAAGGTTTTAGGGAAGAACATGGATGCTATTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
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| 3UTR GCA 90 bp | TTTCTGGTCTCGATTGAACTTCTCCAGCTCCTGAGCCAAAGTAGCTaGTCTCTTGCTGGCTTCTTCTTTCAATCGGTGGTATTTCTTTAC | + |
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Preference number: 1 (lower is better) Translates to: FLVSIELLQLLSQSS*SLAGFFFQSVVFLY Trigger: GTAAAGAAATACCACCGATTGAAAGAAGAAGCCAGCAAGAGAGCAGCTACTTTGGCTCAGGAGCTGGAGAAGTTCAATCGAGACCAGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
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| 3UTR GCA 90 bp | TTGGCCATCTCTACTTCTTCCGTCAGTTCTCCCTCTAGCTTCTTCTaGTCCTCTAGAGACTGCTTGCTAGTGGTAATATATTCTTCTAGC | + |
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Preference number: 1 (lower is better) Translates to: LAISTSSVSSPSSFF*SSRDCLLVVIYSSS Trigger: GCTAGAAGAATATATTACCACTAGCAAGCAGTCTCTAGAGGAGCAGAAGAAGCTAGAGGGAGAACTGACGGAAGAAGTAGAGATGGCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
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| 3UTR TCA 90 bp | TTCCCACAAAGCATGAAAATGATAATCCTCTTATCAAGGTATTTGTaGCATCTGGCTAATCAGGGTAATTTACAAACCGAGCCCATTTCC | + |
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Preference number: 1 (lower is better) Translates to: FPQSMKMIILLSRYL*HLANQGNLQTEPIS Trigger: GGAAATGGGCTCGGTTTGTAAATTACCCTGATTAGCCAGATGTCACAAATACCTTGATAAGAGGATTATCATTTTCATGCTTTGTGGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
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| 3UTR-3UTR TCA 90 bp | GGTGCCATCCAACGCCACTGTCTTGTGGCGTTGGTGACCTCCAAAGGCAATGCGAACTTCTCCAGCTCCTaGGCCAAAGTAGCTGCTCTC | + |
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Preference number: 2 (lower is better) Translates to: GAIQRHCLVALVTSKGNANFSSS*AKVAAL Trigger: GAGAGCAGCTACTTTGGCTCAGGAGCTGGAGAAGTT...CGCATTGCCTTTGGAGGTCACCAACGCCACAAGACAGTGGCGTTGGATGGCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
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| 3UTR-3UTR GCA 90 bp | GGTGCCATCCAACGCCACTGTCTTGTGGCGTTGGTGACCTCCAAAGGCAATGCGATTTCTGCCTTTCGCTaGTGGCGGCTACTCTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: GAIQRHCLVALVTSKGNAISAFR*WRLLSC Trigger: ACAGGAGAGTAGCCGCCAGCAGCGAAAGGCAGAAAT...CGCATTGCCTTTGGAGGTCACCAACGCCACAAGACAGTGGCGTTGGATGGCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
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| 3UTR-3UTR CCA 90 bp | CGCTGCTGGCGGCTACTCTCCTGTCGGTCAATTCGTGCATCCCCTAATTGCTCCAGATCTAGACGGTCCTaGTCAGCTTTCTGGTCTCGA | + |
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Preference number: 2 (lower is better) Translates to: RCWRLLSCRSIRASPNCSRSRRS*SAFWSR Trigger: TCGAGACCAGAAAGCTGACCAGGACCGTCTAGATCT...GGAGCAATTAGGGGATGCACGAATTGACCGACAGGAGAGTAGCCGCCAGCAGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
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| 3UTR-3UTR GCA 90 bp | CACTGTCTTGTGGCGTTGGTGACCTCCAAAGGCAATGCGTCGAGCATCCTCCACCTGAGCCAAAGTAGCTaGTCTCTTGCTGGCTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: HCLVALVTSKGNASSILHLSQSS*SLAGFF Trigger: GAAGAAGCCAGCAAGAGAGCAGCTACTTTGGCTCAG...GTGGAGGATGCTCGACGCATTGCCTTTGGAGGTCACCAACGCCACAAGACAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
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| 3UTR CAA 90 bp | CCAAAACATCCAGCAACTCCCAGAGGTGGCCAATCCTTCTGTCCCTaGCAAGGGTCAGAAGCCCTTCCAGACCCAGGAACAAGACTTGTA | + |
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Preference number: 2 (lower is better) Translates to: PKHPATPRGGQSFCP*QGSEALPDPGTRLV Trigger: TACAAGTCTTGTTCCTGGGTCTGGAAGGGCTTCTGACCCTTGCAAGGGACAGAAGGATTGGCCACCTCTGGGAGTTGCTGGATGTTTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
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| 3UTR-3UTR TCA 90 bp | ACCCTATCTGTGTCCCGGCTCTTTCCCAGCAACCAAAACATCCAGCAACTCCCAGGACACAAGGGCAGATaGGGGATCCAGACAAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: TLSVSRLFPSNQNIQQLPGHKGR*GIQTRR Trigger: TCTTCTTGTCTGGATCCCTCATCTGCCCTTGTGTCC...TGGGAGTTGCTGGATGTTTTGGTTGCTGGGAAAGAGCCGGGACACAGATAGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
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| 3UTR-3UTR TCA 90 bp | CACTGTCTTGTGGCGTTGGTGACCTCCAAAGGCAATGCGTCGAGCATCCTCCACCTCCACGTTGCTCCTTaGTATACTGAATACAGTCCC | + |
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Preference number: 2 (lower is better) Translates to: HCLVALVTSKGNASSILHLHVAP*YTEYSP Trigger: GGGACTGTATTCAGTATATCAAGGAGCAACGTGGAG...GTGGAGGATGCTCGACGCATTGCCTTTGGAGGTCACCAACGCCACAAGACAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
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| 3UTR-3UTR CCA 90 bp | GGTGCCATCCAACGCCACTGTCTTGTGGCGTTGGTGACCTCCAAAGGCAATGCGTGGTATTTCTTTACCTaGTTCTCCTCCAGGGTCAAG | + |
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Preference number: 2 (lower is better) Translates to: GAIQRHCLVALVTSKGNAWYFFT*FSSRVK Trigger: CTTGACCCTGGAGGAGAACCAGGTAAAGAAATACCA...CGCATTGCCTTTGGAGGTCACCAACGCCACAAGACAGTGGCGTTGGATGGCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
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| 3UTR-3UTR TCA 90 bp | TTCTCATCCCAGCGCCGTGCTTTTGCCTTGAGATCACTGGCTCCACCAGAGATACTTTCTGGTCTCGATTaGACTTCTCCAGCTCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: FSSQRRAFALRSLAPPEILSGLD*TSPAPE Trigger: CTCAGGAGCTGGAGAAGTTCAATCGAGACCAGAAAG...TATCTCTGGTGGAGCCAGTGATCTCAAGGCAAAAGCACGGCGCTGGGATGAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
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| 3UTR-3UTR TCA 90 bp | TTCTCATCCCAGCGCCGTGCTTTTGCCTTGAGATCACTGGCTCCACCAGAGATACCCGCAGTTTTTGCTTaGTCTTGGCCTCTGTTTCTA | + |
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Preference number: 2 (lower is better) Translates to: FSSQRRAFALRSLAPPEIPAVFA*SWPLFL Trigger: TAGAAACAGAGGCCAAGATCAAGCAAAAACTGCGGG...TATCTCTGGTGGAGCCAGTGATCTCAAGGCAAAAGCACGGCGCTGGGATGAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
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| 3UTR-3UTR CCA 90 bp | CTTGTGGCGTTGGTGACCTCCAAAGGCAATGCGTCGAGCATCCTCCACATTATCTCCTGGTCAGCTTTCTaGTCTCGATTGAACTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: LVALVTSKGNASSILHIISWSAF*SRLNFS Trigger: GGAGAAGTTCAATCGAGACCAGAAAGCTGACCAGGA...GATAATGTGGAGGATGCTCGACGCATTGCCTTTGGAGGTCACCAACGCCACAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
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| 3UTR-3UTR TCA 90 bp | TTCTCATCCCAGCGCCGTGCTTTTGCCTTGAGATCACTGGCTCCACCAGAGATACAGGGTAGAGACGCTTaGTGCTTTCCATTATTTCTG | + |
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Preference number: 2 (lower is better) Translates to: FSSQRRAFALRSLAPPEIQGRDA*CFPLFL Trigger: CAGAAATAATGGAAAGCATCAAGCGTCTCTACCCTG...TATCTCTGGTGGAGCCAGTGATCTCAAGGCAAAAGCACGGCGCTGGGATGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
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| 3UTR-3UTR GCA 90 bp | ATCTCATCAATACGACGCTTGGCCATCTCTACTTCTTCCGTCAGTTCTCCCTCTCCAGGGTCAAGTCTCTaGCCTGACTCTGACTCTCTT | + |
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Preference number: 2 (lower is better) Translates to: ISSIRRLAISTSSVSSPSPGSSL*PDSDSL Trigger: AAGAGAGTCAGAGTCAGGGCAGAGACTTGACCCTGG...AGAGGGAGAACTGACGGAAGAAGTAGAGATGGCCAAGCGTCGTATTGATGAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
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| 3UTR-3UTR CCA 90 bp | ACCCTATCTGTGTCCCGGCTCTTTCCCAGCAACCAAAACATCCAGCAACTCCCACTTACCAGAAAGACATaGTCCCTGACTAAACTCAGC | + |
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Preference number: 2 (lower is better) Translates to: TLSVSRLFPSNQNIQQLPLTRKT*SLTKLS Trigger: GCTGAGTTTAGTCAGGGACCATGTCTTTCTGGTAAG...TGGGAGTTGCTGGATGTTTTGGTTGCTGGGAAAGAGCCGGGACACAGATAGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
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| 3UTR-3UTR TCA 90 bp | GAGATAACTCCTGACTTCTGGAACAGGGTGCCATCCAACGCCACTGTCTTGTGGCTGCTTCGAGCTTCTTaGTTTTGTGGGATGTATTCT | + |
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Preference number: 2 (lower is better) Translates to: EITPDFWNRVPSNATVLWLLRAS*FCGMYS Trigger: AGAATACATCCCACAAAATCAAGAAGCTCGAAGCAG...CCACAAGACAGTGGCGTTGGATGGCACCCTGTTCCAGAAGTCAGGAGTTATCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
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| 3UTR-3UTR CCA 90 bp | AGTTTGTCTACTGCTTTCTCATCCCAGCGCCGTGCTTTTGCCTTGAGATCACTGCATCAATACGACGCTTaGCCATCTCTACTTCTTCCG | + |
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Preference number: 2 (lower is better) Translates to: SLSTAFSSQRRAFALRSLHQYDA*PSLLLP Trigger: CGGAAGAAGTAGAGATGGCCAAGCGTCGTATTGATG...CAGTGATCTCAAGGCAAAAGCACGGCGCTGGGATGAGAAAGCAGTAGACAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
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| 3UTR-3UTR TCA 90 bp | ATCTCATCAATACGACGCTTGGCCATCTCTACTTCTTCCGTCAGTTCTCCCTCTAGGCCAGTTCCTTGTTaGGCTTCTCAATCTCCACTT | + |
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Preference number: 2 (lower is better) Translates to: ISSIRRLAISTSSVSSPSRPVPC*ASQSPL Trigger: AAGTGGAGATTGAGAAGCTCAACAAGGAACTGGCCT...AGAGGGAGAACTGACGGAAGAAGTAGAGATGGCCAAGCGTCGTATTGATGAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
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| 3UTR-3UTR TCA 90 bp | AGTTTGTCTACTGCTTTCTCATCCCAGCGCCGTGCTTTTGCCTTGAGATCACTGCCGACCTGTCTTCTCTaGGTCTACAATAATAGCATC | + |
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Preference number: 2 (lower is better) Translates to: SLSTAFSSQRRAFALRSLPTCLL*VYNNSI Trigger: GATGCTATTATTGTAGACTCAGAGAAGACAGGTCGG...CAGTGATCTCAAGGCAAAAGCACGGCGCTGGGATGAGAAAGCAGTAGACAAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
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| 3UTR-3UTR GCA 90 bp | AATGCGTCGAGCATCCTCCACATTATCACAAACAAGGGCATTGCCACAAGCATAGCTTTCCATTATTTCTaGCTTTCGCTGCTGGCGGCT | + |
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Preference number: 2 (lower is better) Translates to: NASSILHIITNKGIATSIAFHYF*LSLLAA Trigger: AGCCGCCAGCAGCGAAAGGCAGAAATAATGGAAAGC...TATGCTTGTGGCAATGCCCTTGTTTGTGATAATGTGGAGGATGCTCGACGCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
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| 3UTR CAA 90 bp | TCATCCTCTACCTTGTCCATCCGCTTCTTGTCCTTCTCAATTTCCTaGTTCTTCGAGGCCAGTTCCTTGTTGAGCTTCTCAATCTCCACT | + |
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Preference number: 2 (lower is better) Translates to: SSSTLSIRFLSFSIS*FFEASSLLSFSIST Trigger: AGTGGAGATTGAGAAGCTCAACAAGGAACTGGCCTCGAAGAACAAGGAAATTGAGAAGGACAAGAAGCGGATGGACAAGGTAGAGGATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
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| 3UTR-3UTR GCA 90 bp | ATCTCATCAATACGACGCTTGGCCATCTCTACTTCTTCCGTCAGTTCTCCCTCTATCTCCCGCAGTTTTTaGTTGATCTTGGCCTCTGTT | + |
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Preference number: 2 (lower is better) Translates to: ISSIRRLAISTSSVSSPSISRSF*LILASV Trigger: AACAGAGGCCAAGATCAAGCAAAAACTGCGGGAGAT...AGAGGGAGAACTGACGGAAGAAGTAGAGATGGCCAAGCGTCGTATTGATGAGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
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| 3UTR-3UTR CCA 90 bp | ACCCTATCTGTGTCCCGGCTCTTTCCCAGCAACCAAAACATCCAGCAACTCCCAGGTATTTGTGACATCTaGCTAATCAGGGTAATTTAC | + |
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Preference number: 2 (lower is better) Translates to: TLSVSRLFPSNQNIQQLPGICDI*LIRVIY Trigger: GTAAATTACCCTGATTAGCCAGATGTCACAAATACC...TGGGAGTTGCTGGATGTTTTGGTTGCTGGGAAAGAGCCGGGACACAGATAGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
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| 3UTR-3UTR CCA 90 bp | ACCCTATCTGTGTCCCGGCTCTTTCCCAGCAACCAAAACATCCAGCAACTCCCACAAAGAAAGGTCAAATaGTTTGTTCAGCAACAAACC | + |
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Preference number: 2 (lower is better) Translates to: TLSVSRLFPSNQNIQQLPQRKVK*FVQQQT Trigger: GGTTTGTTGCTGAACAAACCATTTGACCTTTCTTTG...TGGGAGTTGCTGGATGTTTTGGTTGCTGGGAAAGAGCCGGGACACAGATAGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
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| 3UTR-3UTR CCA 90 bp | AAAGGCAATGCGTCGAGCATCCTCCACATTATCACAAACAAGGGCATTGCCACATCTTCCCTAAAACCTTaGTCACAGCAATCTGATACT | + |
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Preference number: 2 (lower is better) Translates to: KGNASSILHIITNKGIATSSLKP*SQQSDT Trigger: AGTATCAGATTGCTGTGACCAAGGTTTTAGGGAAGA...TGTGGCAATGCCCTTGTTTGTGATAATGTGGAGGATGCTCGACGCATTGCCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
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| 3UTR-3UTR GCA 90 bp | TTCCTCAGGCTCTATTTATTAGATAAACCCTATCTGTGTCCCGGCTCTTTCCCACAAATTTTCAAGGTCTaGTCAAATGTGAGTTTTCCC | + |
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Preference number: 2 (lower is better) Translates to: FLRLYLLDKPYLCPGSFPQIFKV*SNVSFP Trigger: GGGAAAACTCACATTTGAGCAGACCTTGAAAATTTG...TGGGAAAGAGCCGGGACACAGATAGGGTTTATCTAATAAATAGAGCCTGAGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
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| 3UTR-3UTR TCA 90 bp | TCCTCTTATCAAGGTATTTGTGACATCTGGCTAATCAGGGTAATTTACAAACCGGAAAGACATGGTCCCTaGCTAAACTCAGCATTTAAA | + |
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Preference number: 2 (lower is better) Translates to: SSYQGICDIWLIRVIYKPERHGP*LNSAFK Trigger: TTTAAATGCTGAGTTTAGTCAGGGACCATGTCTTTC...CGGTTTGTAAATTACCCTGATTAGCCAGATGTCACAAATACCTTGATAAGAGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
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| 3UTR TCA 72 bp | AGGGTGCCATCCAACGCCACTGTCTTGTGGCGTTGGTaGCCTCCAAAGGCAATGCGTCGAGCATCCTCCACA | + |
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Preference number: 3 (lower is better) Translates to: RVPSNATVLWRW*PPKAMRRASST Trigger: TGTGGAGGATGCTCGACGCATTGCCTTTGGAGGTCACCAACGCCACAAGACAGTGGCGTTGGATGGCACCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
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| 3UTR GCA 72 bp | GCCAGGGTAGAGACGCTTGATGCTTTCCATTATTTCTaGCTTTCGCTGCTGGCGGCTACTCTCCTGTCGGTC | + |
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Preference number: 3 (lower is better) Translates to: ARVETLDAFHYF*LSLLAATLLSV Trigger: GACCGACAGGAGAGTAGCCGCCAGCAGCGAAAGGCAGAAATAATGGAAAGCATCAAGCGTCTCTACCCTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
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| 3UTR-3UTR CAA 90 bp | GGTGCCATCCAACGCCACTGTCTTGTGGCGTTGGTGACCTCCAAAGGCAATGCGAATCTCCCGCAGTTTTaGCTTGATCTTGGCCTCTGT | + |
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Preference number: 3 (lower is better) Translates to: GAIQRHCLVALVTSKGNANLPQF*LDLGLC Trigger: ACAGAGGCCAAGATCAAGCAAAAACTGCGGGAGATT...CGCATTGCCTTTGGAGGTCACCAACGCCACAAGACAGTGGCGTTGGATGGCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
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| 3UTR-3UTR CAA 90 bp | ACCCTATCTGTGTCCCGGCTCTTTCCCAGCAACCAAAACATCCAGCAACTCCCACAATCCTTCTGTCCCTaGCAAGGGTCAGAAGCCCTT | + |
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Preference number: 3 (lower is better) Translates to: TLSVSRLFPSNQNIQQLPQSFCP*QGSEAL Trigger: AAGGGCTTCTGACCCTTGCAAGGGACAGAAGGATTG...TGGGAGTTGCTGGATGTTTTGGTTGCTGGGAAAGAGCCGGGACACAGATAGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
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| 3UTR GCA 72 bp | CCACTGTCTTGTGGCGTTGGTGACCTCCAAAGGCAATaGGTCGAGCATCCTCCACATTATCACAAACAAGGG | + |
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Preference number: 3 (lower is better) Translates to: PLSCGVGDLQRQ*VEHPPHYHKQG Trigger: CCCTTGTTTGTGATAATGTGGAGGATGCTCGACGCATTGCCTTTGGAGGTCACCAACGCCACAAGACAGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
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| 3UTR TCA 72 bp | GAGGCAAGAAGGTCTCAGGCTCTCCACGTTGCTCCTTaGTATACTGAATACAGTCCCGACCTGTCTTCTCTG | + |
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Preference number: 3 (lower is better) Translates to: EARRSQALHVAP*YTEYSPDLSSL Trigger: CAGAGAAGACAGGTCGGGACTGTATTCAGTATATCAAGGAGCAACGTGGAGAGCCTGAGACCTTCTTGCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
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| 3UTR GCA 72 bp | AGACGCTTGATGCTTTCCATTATTTCTGCCTTTCGCTaGTGGCGGCTACTCTCCTGTCGGTCAATTCGTGCA | + |
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Preference number: 3 (lower is better) Translates to: RRLMLSIISAFR*WRLLSCRSIRA Trigger: TGCACGAATTGACCGACAGGAGAGTAGCCGCCAGCAGCGAAAGGCAGAAATAATGGAAAGCATCAAGCGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
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| 3UTR-3UTR CAA 90 bp | CTTGTGGCGTTGGTGACCTCCAAAGGCAATGCGTCGAGCATCCTCCACATTATCTTGTCCATCCGCTTCTaGTCCTTCTCAATTTCCTTG | + |
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Preference number: 3 (lower is better) Translates to: LVALVTSKGNASSILHIILSIRF*SFSISL Trigger: CAAGGAAATTGAGAAGGACAAGAAGCGGATGGACAA...GATAATGTGGAGGATGCTCGACGCATTGCCTTTGGAGGTCACCAACGCCACAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
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| 3UTR GCA 72 bp | GTTGTGGTAGAGTTTAAAGAGCTGCAACTGTACCTGTaGTCGTACTACCTCATCCTTCAGGCGCTGATAGCG | + |
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Preference number: 3 (lower is better) Translates to: VVVEFKELQLYL*SYYLILQALIA Trigger: CGCTATCAGCGCCTGAAGGATGAGGTAGTACGAGCACAGGTACAGTTGCAGCTCTTTAAACTCTACCACAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
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| 3UTR CCA 72 bp | TCTACTTTCTTCCGCTCTTCCAGATCTAGACGGTCCTaGTCAGCTTTCTGGTCTCGATTGAACTTCTCCAGC | + |
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Preference number: 3 (lower is better) Translates to: STFFRSSRSRRS*SAFWSRLNFSS Trigger: GCTGGAGAAGTTCAATCGAGACCAGAAAGCTGACCAGGACCGTCTAGATCTGGAAGAGCGGAAGAAAGTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
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| 3UTR-3UTR CAA 90 bp | TTCTCATCCCAGCGCCGTGCTTTTGCCTTGAGATCACTGGCTCCACCAGAGATAAAAGTAGCTGCTCTCTaGCTGGCTTCTTCTTTCAAT | + |
|
Preference number: 3 (lower is better) Translates to: FSSQRRAFALRSLAPPEIKVAAL*LASSFN Trigger: ATTGAAAGAAGAAGCCAGCAAGAGAGCAGCTACTTT...TATCTCTGGTGGAGCCAGTGATCTCAAGGCAAAAGCACGGCGCTGGGATGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
||
| 3UTR TCA 72 bp | GAGGCCTCTTCTGATTCAATTCCGAGTCCTTTTCCTTaGTCTCCTTCTCAATCTGCTGCTGTTCCCGCATCA | + |
|
Preference number: 3 (lower is better) Translates to: EASSDSIPSPFP*SPSQSAAVPAS Trigger: TGATGCGGGAACAGCAGCAGATTGAGAAGGAGATCAAGGAAAAGGACTCGGAATTGAATCAGAAGAGGCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
||
| 3UTR TCA 72 bp | AAGGTCTCAGGCTCTCCACGTTGCTCCTTGATATACTaGATACAGTCCCGACCTGTCTTCTCTGAGTCTACA | + |
|
Preference number: 3 (lower is better) Translates to: KVSGSPRCSLIY*IQSRPVFSEST Trigger: TGTAGACTCAGAGAAGACAGGTCGGGACTGTATTCAGTATATCAAGGAGCAACGTGGAGAGCCTGAGACCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
||
| 3UTR GCA 72 bp | TCGATTGAACTTCTCCAGCTCCTGAGCCAAAGTAGCTaGTCTCTTGCTGGCTTCTTCTTTCAATCGGTGGTA | + |
|
Preference number: 3 (lower is better) Translates to: SIELLQLLSQSS*SLAGFFFQSVV Trigger: TACCACCGATTGAAAGAAGAAGCCAGCAAGAGAGCAGCTACTTTGGCTCAGGAGCTGGAGAAGTTCAATCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
||
| 3UTR CCA 72 bp | TCCATGATAGGGGGTAATGATATCCAGGAGAGAAGATaGACACAAGGGCAGATGAGGGATCCAGACAAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SMIGGNDIQERR*TQGQMRDPDKK Trigger: CTTCTTGTCTGGATCCCTCATCTGCCCTTGTGTCCATCTTCTCTCCTGGATATCATTACCCCCTATCATGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| 3UTR-3UTR CAA 90 bp | ATCCTTCAGGCGCTGATAGCGGTCCGCCTCTTCCTTTTCTTGTTTGGCCTCCTTATTTCTTTCTTTCGCTaGTCATACTCCTGTGCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: ILQALIAVRLFLFLFGLLISFFR*SYSCAS Trigger: ACTTGCACAGGAGTATGACAAGCGAAAGAAAGAAAT...AAGGAGGCCAAACAAGAAAAGGAAGAGGCGGACCGCTATCAGCGCCTGAAGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCTCCTTCAGCTCATCCTCTACCTTGTCCATCCGCTTCTTGTCCTTCTCAATTCGCCTCTTCCTTTTCTaGTTTGGCCTCCTTTCGTTC | + |
|
Preference number: 3 (lower is better) Translates to: FSFSSSSTLSIRFLSFSIRLFLF*FGLLSF Trigger: GAACGAAAGGAGGCCAAACAAGAAAAGGAAGAGGCG...AATTGAGAAGGACAAGAAGCGGATGGACAAGGTAGAGGATGAGCTGAAGGAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTGTGGCGTTGGTGACCTCCAAAGGCAATGCGTCGAGCATCCTCCACATTATCTCGAGCTTCTTGATTTaGTGGGATGTATTCTCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: LVALVTSKGNASSILHIISSFLI*WDVFSF Trigger: AAAAGAGAATACATCCCACAAAATCAAGAAGCTCGA...GATAATGTGGAGGATGCTCGACGCATTGCCTTTGGAGGTCACCAACGCCACAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
||
| 3UTR-3UTR CAA 90 bp | AATGCGTCGAGCATCCTCCACATTATCACAAACAAGGGCATTGCCACAAGCATATCCCGCAGTTTTTGCTaGATCTTGGCCTCTGTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: NASSILHIITNKGIATSISRSFC*ILASVS Trigger: AGAAACAGAGGCCAAGATCAAGCAAAAACTGCGGGA...TATGCTTGTGGCAATGCCCTTGTTTGTGATAATGTGGAGGATGCTCGACGCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
||
| 3UTR GCA 72 bp | GGGCAGTTTAGTGACTGCCACTCCTATGAGTACTTTTaGTCATCTGATGTACAGCTATCCTGTATTCCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: GQFSDCHSYEYF*SSDVQLSCIPL Trigger: CAAGGGAATACAGGATAGCTGTACATCAGATGAGCAAAAGTACTCATAGGAGTGGCAGTCACTAAACTGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| 3UTR-3UTR CAA 90 bp | TTCTTCTGCTCCTCTAGAGACTGCTTGCTAGTGGTAATATATTCTTCTAGCTTCTCCGAGTCCTTTTCCTaGATCTCCTTCTCAATCTGC | + |
|
Preference number: 3 (lower is better) Translates to: FFCSSRDCLLVVIYSSSFSESFS*ISFSIC Trigger: GCAGATTGAGAAGGAGATCAAGGAAAAGGACTCGGA...GAAGCTAGAAGAATATATTACCACTAGCAAGCAGTCTCTAGAGGAGCAGAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
||
| 3UTR TCA 72 bp | GGTGTCCATTACGTGTCTGATGAACACACAGATGAATaGGTACATGACAGAGTAAATGAGGGCAGTTTAGTG | + |
|
Preference number: 3 (lower is better) Translates to: GVHYVSDEHTDE*VHDRVNEGSLV Trigger: CACTAAACTGCCCTCATTTACTCTGTCATGTACTCATTCATCTGTGTGTTCATCAGACACGTAATGGACACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| 3UTR TCA 72 bp | AGCATGAAAATGATAATCCTCTTATCAAGGTATTTGTaGCATCTGGCTAATCAGGGTAATTTACAAACCGAG | + |
|
Preference number: 3 (lower is better) Translates to: SMKMIILLSRYL*HLANQGNLQTE Trigger: CTCGGTTTGTAAATTACCCTGATTAGCCAGATGTCACAAATACCTTGATAAGAGGATTATCATTTTCATGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| 3UTR CAA 72 bp | GAACAGGGTGCCATCCAACGCCACTGTCTTGTGGCGTaGGTGACCTCCAAAGGCAATGCGTCGAGCATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: EQGAIQRHCLVA*VTSKGNASSIL Trigger: GAGGATGCTCGACGCATTGCCTTTGGAGGTCACCAACGCCACAAGACAGTGGCGTTGGATGGCACCCTGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
||
| CDS-3UTR GCA 90 bp | GGGGGTAATGATATCCAGGAGAGAAGATGGACACAAGGGCAGATGAGGGATCCACGGCTTGCCCACAGGTaGTCCATGTATCAGGTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: GGNDIQERRWTQGQMRDPRLAHR*SMYQVP Trigger: CGGGACCTGATACATGGAGCACCTGTGGGCAAGCCG...TGGATCCCTCATCTGCCCTTGTGTCCATCTTCTCTCCTGGATATCATTACCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CCA 90 bp | ACCCTATCTGTGTCCCGGCTCTTTCCCAGCAACCAAAACATCCAGCAACTCCCATGCGAGGCCCGAAGTTaGCTAGTTCACTCTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TLSVSRLFPSNQNIQQLPCEARS*LVHSPA Trigger: AGCTGGAGAGTGAACTAGCCAACTTCGGGCCTCGCA...TGGGAGTTGCTGGATGTTTTGGTTGCTGGGAAAGAGCCGGGACACAGATAGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR TCA 90 bp | GGGGGTAATGATATCCAGGAGAGAAGATGGACACAAGGGCAGATGAGGGATCCATGTCTTCTCCCCGCCTaGCAAATTGTCCATAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: GGNDIQERRWTQGQMRDPCLLPA*QIVHRP Trigger: CGGCCTATGGACAATTTGTCAGGCGGGGAGAAGACA...TGGATCCCTCATCTGCCCTTGTGTCCATCTTCTCTCCTGGATATCATTACCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CCA 90 bp | ACCCTATCTGTGTCCCGGCTCTTTCCCAGCAACCAAAACATCCAGCAACTCCCAGACTCCACTGCACCCTaGAAGACGAGGAAGTTACGA | + |
|
Preference number: 4 (lower is better) Translates to: TLSVSRLFPSNQNIQQLPDSTAP*KTRKLR Trigger: TCGTAACTTCCTCGTCTTCCAGGGTGCAGTGGAGTC...TGGGAGTTGCTGGATGTTTTGGTTGCTGGGAAAGAGCCGGGACACAGATAGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CCA 90 bp | ACCCTATCTGTGTCCCGGCTCTTTCCCAGCAACCAAAACATCCAGCAACTCCCAGTTGGGGTTGGCATCTaGGTACTTGGTGAGGTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: TLSVSRLFPSNQNIQQLPVGVGI*VLGEVE Trigger: TTCGACCTCACCAAGTACCCAGATGCCAACCCCAAC...TGGGAGTTGCTGGATGTTTTGGTTGCTGGGAAAGAGCCGGGACACAGATAGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR TCA 90 bp | ACCCTATCTGTGTCCCGGCTCTTTCCCAGCAACCAAAACATCCAGCAACTCCCACTTTCTGGTCTCGATTaGACTTCTCCAGCTCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TLSVSRLFPSNQNIQQLPLSGLD*TSPAPE Trigger: CTCAGGAGCTGGAGAAGTTCAATCGAGACCAGAAAG...TGGGAGTTGCTGGATGTTTTGGTTGCTGGGAAAGAGCCGGGACACAGATAGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR TCA 90 bp | ACCCTATCTGTGTCCCGGCTCTTTCCCAGCAACCAAAACATCCAGCAACTCCCACATCTGGGTACTTGGTaGGGTCGAAAGTCAGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: TLSVSRLFPSNQNIQQLPHLGTW*GRKSGL Trigger: AAGTCCTGACTTTCGACCTCACCAAGTACCCAGATG...TGGGAGTTGCTGGATGTTTTGGTTGCTGGGAAAGAGCCGGGACACAGATAGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR GCA 90 bp | GGGGGTAATGATATCCAGGAGAGAAGATGGACACAAGGGCAGATGAGGGATCCACCAGGGTCAAGTCTCTaGCCTGACTCTGACTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GGNDIQERRWTQGQMRDPPGSSL*PDSDSL Trigger: AAGAGAGTCAGAGTCAGGGCAGAGACTTGACCCTGG...TGGATCCCTCATCTGCCCTTGTGTCCATCTTCTCTCCTGGATATCATTACCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR GCA 90 bp | ACCCTATCTGTGTCCCGGCTCTTTCCCAGCAACCAAAACATCCAGCAACTCCCACCCTCTAGCTTCTTCTaGTCCTCTAGAGACTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TLSVSRLFPSNQNIQQLPPSSFF*SSRDCL Trigger: CAAGCAGTCTCTAGAGGAGCAGAAGAAGCTAGAGGG...TGGGAGTTGCTGGATGTTTTGGTTGCTGGGAAAGAGCCGGGACACAGATAGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR GCA 90 bp | GGGGGTAATGATATCCAGGAGAGAAGATGGACACAAGGGCAGATGAGGGATCCACGTGCATCCCCTAATTaGTCCATCACCTGGTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GGNDIQERRWTQGQMRDPRASPN*SITWFS Trigger: GCTGAACCAGGTGATGGAGCAATTAGGGGATGCACG...TGGATCCCTCATCTGCCCTTGTGTCCATCTTCTCTCCTGGATATCATTACCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR GCA 90 bp | GGGGGTAATGATATCCAGGAGAGAAGATGGACACAAGGGCAGATGAGGGATCCAATTTCTGCCTTTCGCTaGTGGCGGCTACTCTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GGNDIQERRWTQGQMRDPISAFR*WRLLSC Trigger: ACAGGAGAGTAGCCGCCAGCAGCGAAAGGCAGAAAT...TGGATCCCTCATCTGCCCTTGTGTCCATCTTCTCTCCTGGATATCATTACCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR GCA 90 bp | GGGGGTAATGATATCCAGGAGAGAAGATGGACACAAGGGCAGATGAGGGATCCAGGTTGTGGCGGTCACTaGGCTTCTGTTCAAGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GGNDIQERRWTQGQMRDPGCGGH*ASVQVW Trigger: CCAAACTTGAACAGAAGCGCAGTGACCGCCACAACC...TGGATCCCTCATCTGCCCTTGTGTCCATCTTCTCTCCTGGATATCATTACCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR GCA 90 bp | GGGGGTAATGATATCCAGGAGAGAAGATGGACACAAGGGCAGATGAGGGATCCACTGCTTGGCCTTCTTTaGTCGCTTTCGTGCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GGNDIQERRWTQGQMRDPLLGLL*SLSCCF Trigger: GAAGCAGCACGAAAGCGAGCAAAGAAGGCCAAGCAG...TGGATCCCTCATCTGCCCTTGTGTCCATCTTCTCTCCTGGATATCATTACCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR GCA 90 bp | GAGAAGATGGACACAAGGGCAGATGAGGGATCCAGACAAGAAGATAGAGTTCCTCTCAGGGCCCAAGAATaGCTGGGCACTGCTGTTACG | + |
|
Preference number: 4 (lower is better) Translates to: EKMDTRADEGSRQEDRVPLRAQE*LGTAVT Trigger: CGTAACAGCAGTGCCCAGGCATTCTTGGGCCCTGAG...AGGAACTCTATCTTCTTGTCTGGATCCCTCATCTGCCCTTGTGTCCATCTTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR GCA 90 bp | GAGAAGATGGACACAAGGGCAGATGAGGGATCCAGACAAGAAGATAGAGTTCCTAAGCAAGGCCAGAGCTaGAACTGTCTTCTCCCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: EKMDTRADEGSRQEDRVPKQGQS*NCLLPA Trigger: GGCGGGGAGAAGACAGTTGCAGCTCTGGCCTTGCTT...AGGAACTCTATCTTCTTGTCTGGATCCCTCATCTGCCCTTGTGTCCATCTTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CCA 90 bp | GAGAAGATGGACACAAGGGCAGATGAGGGATCCAGACAAGAAGATAGAGTTCCTGCCTGTAGCAGGTTGTaGCGGTCACTGCGCTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: EKMDTRADEGSRQEDRVPACSRL*RSLRFC Trigger: ACAGAAGCGCAGTGACCGCCACAACCTGCTACAGGC...AGGAACTCTATCTTCTTGTCTGGATCCCTCATCTGCCCTTGTGTCCATCTTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR TCA 90 bp | GGGGGTAATGATATCCAGGAGAGAAGATGGACACAAGGGCAGATGAGGGATCCAGGCATCCATGAGATTTaGCTTACCAGAGCCATTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GGNDIQERRWTQGQMRDPGIHEI*LTRAIG Trigger: CCCAATGGCTCTGGTAAGTCAAATCTCATGGATGCC...TGGATCCCTCATCTGCCCTTGTGTCCATCTTCTCTCCTGGATATCATTACCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR TCA 90 bp | TGCAAACAATCTAACATGCACACAAGCATAAGGGGCATGGTGTCAGGCGATCCAAAGAGCCCCCTACAATaGCTCGGGCAAAGGTACGGT | + |
|
Preference number: 4 (lower is better) Translates to: CKQSNMHTSIRGMVSGDPKSPLQ*LGQRYG Trigger: ACCGTACCTTTGCCCGAGTCATTGTAGGGGGCTCTT...TGGATCGCCTGACACCATGCCCCTTATGCTTGTGTGCATGTTAGATTGTTTGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR TCA 90 bp | TTCCTCAGGCTCTATTTATTAGATAAACCCTATCTGTGTCCCGGCTCTTTCCCAGGGGCAGCAATCCGCTaGAGCACACTCTGCTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FLRLYLLDKPYLCPGSFPGAAIR*STLCCS Trigger: TGAGCAGCAGAGTGTGCTTCAGCGGATTGCTGCCCC...TGGGAAAGAGCCGGGACACAGATAGGGTTTATCTAATAAATAGAGCCTGAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR GCA 90 bp | ACCCTATCTGTGTCCCGGCTCTTTCCCAGCAACCAAAACATCCAGCAACTCCCACACCCCCAAGCTTCTTaGGAATCTCTTCCATCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TLSVSRLFPSNQNIQQLPHPQAS*ESLPSH Trigger: ATGAGATGGAAGAGATTCGCAAGAAGCTTGGGGGTG...TGGGAGTTGCTGGATGTTTTGGTTGCTGGGAAAGAGCCGGGACACAGATAGGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CCA 90 bp | TTCCTCAGGCTCTATTTATTAGATAAACCCTATCTGTGTCCCGGCTCTTTCCCATCTGCCTTTCGCTGCTaGCGGCTACTCTCCTGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: FLRLYLLDKPYLCPGSFPSAFRC*RLLSCR Trigger: CCGACAGGAGAGTAGCCGCCAGCAGCGAAAGGCAGA...TGGGAAAGAGCCGGGACACAGATAGGGTTTATCTAATAAATAGAGCCTGAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CCA 90 bp | TGCAAACAATCTAACATGCACACAAGCATAAGGGGCATGGTGTCAGGCGATCCACATCAATCACTAGCTTaGCCCCCTTCAGCTCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: CKQSNMHTSIRGMVSGDPHQSLA*PPSAPG Trigger: TCCGGGAGCTGAAGGGGGCCAAGCTAGTGATTGATG...TGGATCGCCTGACACCATGCCCCTTATGCTTGTGTGCATGTTAGATTGTTTGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CCA 90 bp | ACCCTATCTGTGTCCCGGCTCTTTCCCAGCAACCAAAACATCCAGCAACTCCCACTCGAGCATAGATACTaGATGTTCTCTGGGAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: TLSVSRLFPSNQNIQQLPLEHRY*MFSGNH Trigger: GTGGTTCCCAGAGAACATCCAGTATCTATGCTCGAG...TGGGAGTTGCTGGATGTTTTGGTTGCTGGGAAAGAGCCGGGACACAGATAGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CCA 90 bp | TGCAAACAATCTAACATGCACACAAGCATAAGGGGCATGGTGTCAGGCGATCCAGACGAAGAAGGGGGCTaGCTTGTAGCTATGGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: CKQSNMHTSIRGMVSGDPDEEGG*LVAMDG Trigger: GCCATCCATAGCTACAAGCCAGCCCCCTTCTTCGTC...TGGATCGCCTGACACCATGCCCCTTATGCTTGTGTGCATGTTAGATTGTTTGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR TCA 90 bp | TTCCTCAGGCTCTATTTATTAGATAAACCCTATCTGTGTCCCGGCTCTTTCCCACCGAGTAGACCATGCTaGCAAAGGCTCGGTTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FLRLYLLDKPYLCPGSFPPSRPC*QRLGWQ Trigger: CTGCCAACCGAGCCTTTGTCAGCATGGTCTACTCGG...TGGGAAAGAGCCGGGACACAGATAGGGTTTATCTAATAAATAGAGCCTGAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR TCA 90 bp | TGCAAACAATCTAACATGCACACAAGCATAAGGGGCATGGTGTCAGGCGATCCAAACTTCTCCAGCTCCTaGGCCAAAGTAGCTGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CKQSNMHTSIRGMVSGDPNFSSS*AKVAAL Trigger: GAGAGCAGCTACTTTGGCTCAGGAGCTGGAGAAGTT...TGGATCGCCTGACACCATGCCCCTTATGCTTGTGTGCATGTTAGATTGTTTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR TCA 90 bp | TGCAAACAATCTAACATGCACACAAGCATAAGGGGCATGGTGTCAGGCGATCCAACCAGAGATAACTCCTaGCTTCTGGAACAGGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: CKQSNMHTSIRGMVSGDPTRDNS*LLEQGA Trigger: GGCACCCTGTTCCAGAAGTCAGGAGTTATCTCTGGT...TGGATCGCCTGACACCATGCCCCTTATGCTTGTGTGCATGTTAGATTGTTTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR GCA 90 bp | ACCCTATCTGTGTCCCGGCTCTTTCCCAGCAACCAAAACATCCAGCAACTCCCATCTTTACCCTCAGGTTaGTGGTCTTTTCACCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TLSVSRLFPSNQNIQQLPSLPSG*WSFHQA Trigger: TGCTTGGTGAAAAGACCAGCAACCTGAGGGTAAAGA...TGGGAGTTGCTGGATGTTTTGGTTGCTGGGAAAGAGCCGGGACACAGATAGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR GCA 90 bp | TGCAAACAATCTAACATGCACACAAGCATAAGGGGCATGGTGTCAGGCGATCCACTCATCCCAGCGCCGTaGTTTTGCCTTGAGATCACT | + |
|
Preference number: 4 (lower is better) Translates to: CKQSNMHTSIRGMVSGDPLIPAP*FCLEIT Trigger: AGTGATCTCAAGGCAAAAGCACGGCGCTGGGATGAG...TGGATCGCCTGACACCATGCCCCTTATGCTTGTGTGCATGTTAGATTGTTTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR GCA 90 bp | GGGGGTAATGATATCCAGGAGAGAAGATGGACACAAGGGCAGATGAGGGATCCACGTTTTGCCTTCATCTaGTCTTTCAGCTCCTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GGNDIQERRWTQGQMRDPRFAFI*SFSSSV Trigger: GACAGAGGAGCTGAAAGAGCAGATGAAGGCAAAACG...TGGATCCCTCATCTGCCCTTGTGTCCATCTTCTCTCCTGGATATCATTACCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR GCA 90 bp | GGGGGTAATGATATCCAGGAGAGAAGATGGACACAAGGGCAGATGAGGGATCCAATCTGTTCAAATGCCTaGTTGGCCTTCTTTGCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: GGNDIQERRWTQGQMRDPICSNA*LAFFAR Trigger: GCGAGCAAAGAAGGCCAAGCAGGCATTTGAACAGAT...TGGATCCCTCATCTGCCCTTGTGTCCATCTTCTCTCCTGGATATCATTACCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CCA 90 bp | GGGGGTAATGATATCCAGGAGAGAAGATGGACACAAGGGCAGATGAGGGATCCATCCTGGTCAGCTTTCTaGTCTCGATTGAACTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GGNDIQERRWTQGQMRDPSWSAF*SRLNFS Trigger: GGAGAAGTTCAATCGAGACCAGAAAGCTGACCAGGA...TGGATCCCTCATCTGCCCTTGTGTCCATCTTCTCTCCTGGATATCATTACCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR TCA 90 bp | ACCCTATCTGTGTCCCGGCTCTTTCCCAGCAACCAAAACATCCAGCAACTCCCATTGGTCACAGCAATCTaGTACTTCTTTTGTGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TLSVSRLFPSNQNIQQLPLVTAI*YFFCVG Trigger: GCCTACACAAAAGAAGTATCAGATTGCTGTGACCAA...TGGGAGTTGCTGGATGTTTTGGTTGCTGGGAAAGAGCCGGGACACAGATAGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR TCA 90 bp | TTCCTCAGGCTCTATTTATTAGATAAACCCTATCTGTGTCCCGGCTCTTTCCCAGTCTTGTGGCGTTGGTaGCCTCCAAAGGCAATGCGT | + |
|
Preference number: 4 (lower is better) Translates to: FLRLYLLDKPYLCPGSFPVLWRW*PPKAMR Trigger: ACGCATTGCCTTTGGAGGTCACCAACGCCACAAGAC...TGGGAAAGAGCCGGGACACAGATAGGGTTTATCTAATAAATAGAGCCTGAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR TCA 90 bp | GAGAAGATGGACACAAGGGCAGATGAGGGATCCAGACAAGAAGATAGAGTTCCTATCCATGGTGCCCTTTaGCAGTGGCAGTTTGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: EKMDTRADEGSRQEDRVPIHGAL*QWQFDV Trigger: GACATCAAACTGCCACTGTCAAAGGGCACCATGGAT...AGGAACTCTATCTTCTTGTCTGGATCCCTCATCTGCCCTTGTGTCCATCTTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR TCA 90 bp | GAGAAGATGGACACAAGGGCAGATGAGGGATCCAGACAAGAAGATAGAGTTCCTCGTAGTCAATCTCAATaGGGGCCTCTCGAGCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: EKMDTRADEGSRQEDRVPRSQSQ*GPLEHR Trigger: TCTATGCTCGAGAGGCCCTCATTGAGATTGACTACG...AGGAACTCTATCTTCTTGTCTGGATCCCTCATCTGCCCTTGTGTCCATCTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR TCA 90 bp | GGGGGTAATGATATCCAGGAGAGAAGATGGACACAAGGGCAGATGAGGGATCCACTACACAGTTGTAGTTaGTGCCATCCAAATAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GGNDIQERRWTQGQMRDPLHSCS*CHPNRA Trigger: AGCCCTATTTGGATGGCATCAACTACAACTGTGTAG...TGGATCCCTCATCTGCCCTTGTGTCCATCTTCTCTCCTGGATATCATTACCCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR TCA 90 bp | TGCAAACAATCTAACATGCACACAAGCATAAGGGGCATGGTGTCAGGCGATCCAAAGTCAGGACTTTGCTaGTCACACAGTCCCCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CKQSNMHTSIRGMVSGDPKSGLC*SHSPLA Trigger: AGCAAGGGGACTGTGTGATCAGCAAAGTCCTGACTT...TGGATCGCCTGACACCATGCCCCTTATGCTTGTGTGCATGTTAGATTGTTTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR GCA 90 bp | GGGGGTAATGATATCCAGGAGAGAAGATGGACACAAGGGCAGATGAGGGATCCAATCTCCCGCAGTTTTTaGTTGATCTTGGCCTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GGNDIQERRWTQGQMRDPISRSF*LILASV Trigger: AACAGAGGCCAAGATCAAGCAAAAACTGCGGGAGAT...TGGATCCCTCATCTGCCCTTGTGTCCATCTTCTCTCCTGGATATCATTACCCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CCA 90 bp | TGCAAACAATCTAACATGCACACAAGCATAAGGGGCATGGTGTCAGGCGATCCAAGATCTAGACGGTCCTaGTCAGCTTTCTGGTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: CKQSNMHTSIRGMVSGDPRSRRS*SAFWSR Trigger: TCGAGACCAGAAAGCTGACCAGGACCGTCTAGATCT...TGGATCGCCTGACACCATGCCCCTTATGCTTGTGTGCATGTTAGATTGTTTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CCA 90 bp | GAGAAGATGGACACAAGGGCAGATGAGGGATCCAGACAAGAAGATAGAGTTCCTGAGTCATTTCCTTGTTaGCACCCCCAAGCTTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: EKMDTRADEGSRQEDRVPESFPC*HPQASC Trigger: GCAAGAAGCTTGGGGGTGCCAACAAGGAAATGACTC...AGGAACTCTATCTTCTTGTCTGGATCCCTCATCTGCCCTTGTGTCCATCTTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CCA 90 bp | GAGAAGATGGACACAAGGGCAGATGAGGGATCCAGACAAGAAGATAGAGTTCCTCCACCTTGCCAATGTTaGTGTTATCCAAGGCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: EKMDTRADEGSRQEDRVPPPCQC*CYPRQR Trigger: ACGCTGCCTTGGATAACACCAACATTGGCAAGGTGG...AGGAACTCTATCTTCTTGTCTGGATCCCTCATCTGCCCTTGTGTCCATCTTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR TCA 90 bp | GGGGGTAATGATATCCAGGAGAGAAGATGGACACAAGGGCAGATGAGGGATCCAGGACAACTTTGTTGTTaGTCTTGTACTCAGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GGNDIQERRWTQGQMRDPGQLCC*SCTQKS Trigger: GCTCTTCTGAGTACAAGATCAACAACAAAGTTGTCC...TGGATCCCTCATCTGCCCTTGTGTCCATCTTCTCTCCTGGATATCATTACCCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR TCA 90 bp | GAGAAGATGGACACAAGGGCAGATGAGGGATCCAGACAAGAAGATAGAGTTCCTAGGCCAGTTCCTTGTTaGGCTTCTCAATCTCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: EKMDTRADEGSRQEDRVPRPVPC*ASQSPL Trigger: AAGTGGAGATTGAGAAGCTCAACAAGGAACTGGCCT...AGGAACTCTATCTTCTTGTCTGGATCCCTCATCTGCCCTTGTGTCCATCTTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR TCA 90 bp | TGCAAACAATCTAACATGCACACAAGCATAAGGGGCATGGTGTCAGGCGATCCACCGAGTCCTTTTCCTTaGTCTCCTTCTCAATCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CKQSNMHTSIRGMVSGDPPSPFP*SPSQSA Trigger: AGCAGATTGAGAAGGAGATCAAGGAAAAGGACTCGG...TGGATCGCCTGACACCATGCCCCTTATGCTTGTGTGCATGTTAGATTGTTTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR TCA 90 bp | GAGAAGATGGACACAAGGGCAGATGAGGGATCCAGACAAGAAGATAGAGTTCCTCCCGCAGTTTTTGCTTaGTCTTGGCCTCTGTTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: EKMDTRADEGSRQEDRVPPAVFA*SWPLFL Trigger: TAGAAACAGAGGCCAAGATCAAGCAAAAACTGCGGG...AGGAACTCTATCTTCTTGTCTGGATCCCTCATCTGCCCTTGTGTCCATCTTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR TCA 90 bp | TGCAAACAATCTAACATGCACACAAGCATAAGGGGCATGGTGTCAGGCGATCCACTTGTCGTTTACTTCTaGCTTTTTGGCCAGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CKQSNMHTSIRGMVSGDPLVVYF*LFGQVL Trigger: CAGCACCTGGCCAAAAAGTCAGAAGTAAACGACAAG...TGGATCGCCTGACACCATGCCCCTTATGCTTGTGTGCATGTTAGATTGTTTGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR TCA 90 bp | GAGAAGATGGACACAAGGGCAGATGAGGGATCCAGACAAGAAGATAGAGTTCCTTTGACAGTGGCAGTTTaGTGTCCTGCATCTTACAGG | + |
|
Preference number: 4 (lower is better) Translates to: EKMDTRADEGSRQEDRVPLTVAV*CPASYR Trigger: CCTGTAAGATGCAGGACATCAAACTGCCACTGTCAA...AGGAACTCTATCTTCTTGTCTGGATCCCTCATCTGCCCTTGTGTCCATCTTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR TCA 90 bp | TGCAAACAATCTAACATGCACACAAGCATAAGGGGCATGGTGTCAGGCGATCCATGCTTCAAACTCATCTaGGGTCTCCTGGAACTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: CKQSNMHTSIRGMVSGDPCFKLI*GLLELV Trigger: GACAAGTTCCAGGAGACCTCAGATGAGTTTGAAGCA...TGGATCGCCTGACACCATGCCCCTTATGCTTGTGTGCATGTTAGATTGTTTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR GCA 90 bp | TTCCTCAGGCTCTATTTATTAGATAAACCCTATCTGTGTCCCGGCTCTTTCCCAGGCAATAGACTCCACTaGACCCTGGAAGACGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FLRLYLLDKPYLCPGSFPGNRLH*TLEDEE Trigger: TTCCTCGTCTTCCAGGGTGCAGTGGAGTCTATTGCC...TGGGAAAGAGCCGGGACACAGATAGGGTTTATCTAATAAATAGAGCCTGAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR GCA 90 bp | TGCAAACAATCTAACATGCACACAAGCATAAGGGGCATGGTGTCAGGCGATCCACTGCAACTGTACCTGTaGTCGTACTACCTCATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: CKQSNMHTSIRGMVSGDPLQLYL*SYYLIL Trigger: AAGGATGAGGTAGTACGAGCACAGGTACAGTTGCAG...TGGATCGCCTGACACCATGCCCCTTATGCTTGTGTGCATGTTAGATTGTTTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR GCA 90 bp | GGGGGTAATGATATCCAGGAGAGAAGATGGACACAAGGGCAGATGAGGGATCCAAGATTCAGGGCAAGATaGCTTGTCTTAGTCTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GGNDIQERRWTQGQMRDPRFRAR*LVLVCS Trigger: AGAACAGACTAAGACAAGGCATCTTGCCCTGAATCT...TGGATCCCTCATCTGCCCTTGTGTCCATCTTCTCTCCTGGATATCATTACCCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CCA 90 bp | GAGAAGATGGACACAAGGGCAGATGAGGGATCCAGACAAGAAGATAGAGTTCCTCATCAATACGACGCTTaGCCATCTCTACTTCTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: EKMDTRADEGSRQEDRVPHQYDA*PSLLLP Trigger: CGGAAGAAGTAGAGATGGCCAAGCGTCGTATTGATG...AGGAACTCTATCTTCTTGTCTGGATCCCTCATCTGCCCTTGTGTCCATCTTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CCA 90 bp | GGGGGTAATGATATCCAGGAGAGAAGATGGACACAAGGGCAGATGAGGGATCCACAAGTTTGGTCTCAATaGCTGTCACTTCCTTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GGNDIQERRWTQGQMRDPQVWSQ*LSLPSV Trigger: TACAGAAGGAAGTGACAGCCATTGAGACCAAACTTG...TGGATCCCTCATCTGCCCTTGTGTCCATCTTCTCTCCTGGATATCATTACCCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CCA 90 bp | GAGAAGATGGACACAAGGGCAGATGAGGGATCCAGACAAGAAGATAGAGTTCCTGCTTGTAGCTATGGATaGCAAAAAGCAAGGCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: EKMDTRADEGSRQEDRVPACSYG*QKARPE Trigger: CTCTGGCCTTGCTTTTTGCCATCCATAGCTACAAGC...AGGAACTCTATCTTCTTGTCTGGATCCCTCATCTGCCCTTGTGTCCATCTTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR TCA 90 bp | TGCAAACAATCTAACATGCACACAAGCATAAGGGGCATGGTGTCAGGCGATCCATGTTCATTTCTTGCTTaGTTTCTTCCTCCGCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: CKQSNMHTSIRGMVSGDPCSFLA*FLPPPV Trigger: CACAGGCGGAGGAAGAAATCAAGCAAGAAATGAACA...TGGATCGCCTGACACCATGCCCCTTATGCTTGTGTGCATGTTAGATTGTTTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR GCA 90 bp | TGCAAACAATCTAACATGCACACAAGCATAAGGGGCATGGTGTCAGGCGATCCAATCTCCTTCTCAATCTaGTGCTGTTCCCGCATCATT | + |
|
Preference number: 4 (lower is better) Translates to: CKQSNMHTSIRGMVSGDPISFSI*CCSRII Trigger: AATGATGCGGGAACAGCAGCAGATTGAGAAGGAGAT...TGGATCGCCTGACACCATGCCCCTTATGCTTGTGTGCATGTTAGATTGTTTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR GCA 90 bp | GGGGGTAATGATATCCAGGAGAGAAGATGGACACAAGGGCAGATGAGGGATCCAGGATGTATTCTCTTTTaGTTTGATGTACTGAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GGNDIQERRWTQGQMRDPGCILF*FDVLRP Trigger: AGGCCTCAGTACATCAAAGCAAAAGAGAATACATCC...TGGATCCCTCATCTGCCCTTGTGTCCATCTTCTCTCCTGGATATCATTACCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR GCA 90 bp | GGGGGTAATGATATCCAGGAGAGAAGATGGACACAAGGGCAGATGAGGGATCCAAAGAGACTTCTTGGCTaGTTCGAGCTTCTTGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: GGNDIQERRWTQGQMRDPKRLLG*FELLDF Trigger: AAAATCAAGAAGCTCGAAGCAGCCAAGAAGTCTCTT...TGGATCCCTCATCTGCCCTTGTGTCCATCTTCTCTCCTGGATATCATTACCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR GCA 90 bp | TTCCTCAGGCTCTATTTATTAGATAAACCCTATCTGTGTCCCGGCTCTTTCCCACTGAGCCAAAGTAGCTaGTCTCTTGCTGGCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FLRLYLLDKPYLCPGSFPLSQSS*SLAGFF Trigger: GAAGAAGCCAGCAAGAGAGCAGCTACTTTGGCTCAG...TGGGAAAGAGCCGGGACACAGATAGGGTTTATCTAATAAATAGAGCCTGAGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR GCA 90 bp | GAGAAGATGGACACAAGGGCAGATGAGGGATCCAGACAAGAAGATAGAGTTCCTTGCCTCTTTCCGTTTTaGCTTCATCTGCTCTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: EKMDTRADEGSRQEDRVPCLFPF*LHLLFQ Trigger: CTGAAAGAGCAGATGAAGGCAAAACGGAAAGAGGCA...AGGAACTCTATCTTCTTGTCTGGATCCCTCATCTGCCCTTGTGTCCATCTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR GCA 90 bp | GGGGGTAATGATATCCAGGAGAGAAGATGGACACAAGGGCAGATGAGGGATCCATTCCTTGATGTAATTTaGCACCTTGCCAATGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GGNDIQERRWTQGQMRDPFLDVI*HLANVG Trigger: ACCAACATTGGCAAGGTGGCAAATTACATCAAGGAA...TGGATCCCTCATCTGCCCTTGTGTCCATCTTCTCTCCTGGATATCATTACCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CCA 90 bp | GAGAAGATGGACACAAGGGCAGATGAGGGATCCAGACAAGAAGATAGAGTTCCTGGTAAACCTCTGAAATaGTCCGATAATCTGTCGACC | + |
|
Preference number: 4 (lower is better) Translates to: EKMDTRADEGSRQEDRVPGKPLK*SDNLST Trigger: GGTCGACAGATTATCGGACCATTTCAGAGGTTTACC...AGGAACTCTATCTTCTTGTCTGGATCCCTCATCTGCCCTTGTGTCCATCTTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CCA 90 bp | TTGTCCATCCGCTTCTTGTCCTTCTCAATTTCCTTGTTCTTCGAGGCCAGTTCCGGTAAACCTCTGAAATaGTCCGATAATCTGTCGACC | + |
|
Preference number: 4 (lower is better) Translates to: LSIRFLSFSISLFFEASSGKPLK*SDNLST Trigger: GGTCGACAGATTATCGGACCATTTCAGAGGTTTACC...GGAACTGGCCTCGAAGAACAAGGAAATTGAGAAGGACAAGAAGCGGATGGACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
||
| CDS-3UTR CCA 90 bp | TTCCTCAGGCTCTATTTATTAGATAAACCCTATCTGTGTCCCGGCTCTTTCCCATTCTTTTGTGTAGGCTaGCAGAGGTCAATGAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: FLRLYLLDKPYLCPGSFPFFCVG*QRSMRR Trigger: CCGCCTCATTGACCTCTGCCAGCCTACACAAAAGAA...TGGGAAAGAGCCGGGACACAGATAGGGTTTATCTAATAAATAGAGCCTGAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CCA 90 bp | TGCAAACAATCTAACATGCACACAAGCATAAGGGGCATGGTGTCAGGCGATCCAAGCTTAGACTTTTCCTaGAGATTCAGGGCAAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: CKQSNMHTSIRGMVSGDPSLDFS*RFRARC Trigger: GCATCTTGCCCTGAATCTCCAGGAAAAGTCTAAGCT...TGGATCGCCTGACACCATGCCCCTTATGCTTGTGTGCATGTTAGATTGTTTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CCA 90 bp | GAGAAGATGGACACAAGGGCAGATGAGGGATCCAGACAAGAAGATAGAGTTCCTATACTGGATGTTCTCTaGGAACCACTCACTGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: EKMDTRADEGSRQEDRVPILDVL*EPLTDS Trigger: AGAGTCAGTGAGTGGTTCCCAGAGAACATCCAGTAT...AGGAACTCTATCTTCTTGTCTGGATCCCTCATCTGCCCTTGTGTCCATCTTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CCA 90 bp | TTCCTCAGGCTCTATTTATTAGATAAACCCTATCTGTGTCCCGGCTCTTTCCCATCATCTGAGGTCTCCTaGAACTTGTCTCGGACACTC | + |
|
Preference number: 4 (lower is better) Translates to: FLRLYLLDKPYLCPGSFPSSEVS*NLSRTL Trigger: GAGTGTCCGAGACAAGTTCCAGGAGACCTCAGATGA...TGGGAAAGAGCCGGGACACAGATAGGGTTTATCTAATAAATAGAGCCTGAGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| 3UTR CAA 72 bp | ACCTTGTCCATCCGCTTCTTGTCCTTCTCAATTTCCTaGTTCTTCGAGGCCAGTTCCTTGTTGAGCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TLSIRFLSFSIS*FFEASSLLSFS Trigger: TGAGAAGCTCAACAAGGAACTGGCCTCGAAGAACAAGGAAATTGAGAAGGACAAGAAGCGGATGGACAAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
||
| CDS-3UTR TCA 90 bp | GAGAAGATGGACACAAGGGCAGATGAGGGATCCAGACAAGAAGATAGAGTTCCTAAGTTGACTGTTCCTTaGTGTAATTTGCCACCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: EKMDTRADEGSRQEDRVPKLTVP*CNLPPC Trigger: GCAAGGTGGCAAATTACATCAAGGAACAGTCAACTT...AGGAACTCTATCTTCTTGTCTGGATCCCTCATCTGCCCTTGTGTCCATCTTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR GCA 90 bp | GAGAAGATGGACACAAGGGCAGATGAGGGATCCAGACAAGAAGATAGAGTTCCTCAAAATCCAATTGGATaGCCAAGCGAGTCTTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: EKMDTRADEGSRQEDRVPQNPIG*PSESSD Trigger: ATCAGAAGACTCGCTTGGGCATCCAATTGGATTTTG...AGGAACTCTATCTTCTTGTCTGGATCCCTCATCTGCCCTTGTGTCCATCTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CCA 90 bp | TTCCTCAGGCTCTATTTATTAGATAAACCCTATCTGTGTCCCGGCTCTTTCCCAATAACTCCTGACTTCTaGAACAGGGTGCCATCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: FLRLYLLDKPYLCPGSFPITPDF*NRVPSN Trigger: GTTGGATGGCACCCTGTTCCAGAAGTCAGGAGTTAT...TGGGAAAGAGCCGGGACACAGATAGGGTTTATCTAATAAATAGAGCCTGAGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CCA 90 bp | GAGAAGATGGACACAAGGGCAGATGAGGGATCCAGACAAGAAGATAGAGTTCCTGCTTCTGTTCAAGTTTaGTCTCAATGGCTGTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: EKMDTRADEGSRQEDRVPASVQV*SQWLSL Trigger: AAGTGACAGCCATTGAGACCAAACTTGAACAGAAGC...AGGAACTCTATCTTCTTGTCTGGATCCCTCATCTGCCCTTGTGTCCATCTTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR TCA 90 bp | TTCCTCAGGCTCTATTTATTAGATAAACCCTATCTGTGTCCCGGCTCTTTCCCAATGGCGGTAAACCTCTaGAATGGTCCGATAATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FLRLYLLDKPYLCPGSFPMAVNL*NGPIIC Trigger: ACAGATTATCGGACCATTTCAGAGGTTTACCGCCAT...TGGGAAAGAGCCGGGACACAGATAGGGTTTATCTAATAAATAGAGCCTGAGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR TCA 90 bp | CTTCTTGTCCTTCTCAATTTCCTTGTTCTTCGAGGCCAGTTCCTTGTTGAGCTTATGGCGGTAAACCTCTaGAATGGTCCGATAATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLVLLNFLVLRGQFLVELMAVNL*NGPIIC Trigger: ACAGATTATCGGACCATTTCAGAGGTTTACCGCCAT...AAGCTCAACAAGGAACTGGCCTCGAAGAACAAGGAAATTGAGAAGGACAAGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
||
| CDS-3UTR TCA 90 bp | TTCCTCAGGCTCTATTTATTAGATAAACCCTATCTGTGTCCCGGCTCTTTCCCACAGGGTAGAGACGCTTaGTGCTTTCCATTATTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FLRLYLLDKPYLCPGSFPQGRDA*CFPLFL Trigger: CAGAAATAATGGAAAGCATCAAGCGTCTCTACCCTG...TGGGAAAGAGCCGGGACACAGATAGGGTTTATCTAATAAATAGAGCCTGAGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR TCA 90 bp | TTCCTCAGGCTCTATTTATTAGATAAACCCTATCTGTGTCCCGGCTCTTTCCCACCGACCTGTCTTCTCTaGGTCTACAATAATAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: FLRLYLLDKPYLCPGSFPPTCLL*VYNNSI Trigger: GATGCTATTATTGTAGACTCAGAGAAGACAGGTCGG...TGGGAAAGAGCCGGGACACAGATAGGGTTTATCTAATAAATAGAGCCTGAGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR TCA 90 bp | GAGAAGATGGACACAAGGGCAGATGAGGGATCCAGACAAGAAGATAGAGTTCCTCTGGAAGTTGCAAGTTaGCTGTTCCTTGATGTAATT | + |
|
Preference number: 4 (lower is better) Translates to: EKMDTRADEGSRQEDRVPLEVAS*LFLDVI Trigger: AATTACATCAAGGAACAGTCAACTTGCAACTTCCAG...AGGAACTCTATCTTCTTGTCTGGATCCCTCATCTGCCCTTGTGTCCATCTTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR GCA 90 bp | TCCTCTTATCAAGGTATTTGTGACATCTGGCTAATCAGGGTAATTTACAAACCGGACCTCCAAAGGCAATaGGTCGAGCATCCTCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: SSYQGICDIWLIRVIYKPDLQRQ*VEHPPH Trigger: ATGTGGAGGATGCTCGACGCATTGCCTTTGGAGGTC...CGGTTTGTAAATTACCCTGATTAGCCAGATGTCACAAATACCTTGATAAGAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR GCA 90 bp | TCCTCTTATCAAGGTATTTGTGACATCTGGCTAATCAGGGTAATTTACAAACCGACTTCTGGAACAGGGTaGCATCCAACGCCACTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSYQGICDIWLIRVIYKPTSGTG*HPTPLS Trigger: AGACAGTGGCGTTGGATGGCACCCTGTTCCAGAAGT...CGGTTTGTAAATTACCCTGATTAGCCAGATGTCACAAATACCTTGATAAGAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR GCA 90 bp | GAGAAGATGGACACAAGGGCAGATGAGGGATCCAGACAAGAAGATAGAGTTCCTTGTAATTTGCCACCTTaGCAATGTTGGTGTTATCCA | + |
|
Preference number: 4 (lower is better) Translates to: EKMDTRADEGSRQEDRVPCNLPP*QCWCYP Trigger: TGGATAACACCAACATTGGCAAGGTGGCAAATTACA...AGGAACTCTATCTTCTTGTCTGGATCCCTCATCTGCCCTTGTGTCCATCTTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CCA 90 bp | TGCAAACAATCTAACATGCACACAAGCATAAGGGGCATGGTGTCAGGCGATCCATTTTCAAAATCCAATTaGATGCCCAAGCGAGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CKQSNMHTSIRGMVSGDPFSKSN*MPKRVF Trigger: GAAGACTCGCTTGGGCATCCAATTGGATTTTGAAAA...TGGATCGCCTGACACCATGCCCCTTATGCTTGTGTGCATGTTAGATTGTTTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR GCA 90 bp | TCCTCTTATCAAGGTATTTGTGACATCTGGCTAATCAGGGTAATTTACAAACCGGCTTTCCATTATTTCTaGCTTTCGCTGCTGGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSYQGICDIWLIRVIYKPAFHYF*LSLLAA Trigger: AGCCGCCAGCAGCGAAAGGCAGAAATAATGGAAAGC...CGGTTTGTAAATTACCCTGATTAGCCAGATGTCACAAATACCTTGATAAGAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR GCA 90 bp | TTCCTCAGGCTCTATTTATTAGATAAACCCTATCTGTGTCCCGGCTCTTTCCCATTGGCAATTTCATTCTaGCGCTTCACCTTTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FLRLYLLDKPYLCPGSFPLAISF*RFTFSS Trigger: GGAAGAAAAGGTGAAGCGGCAGAATGAAATTGCCAA...TGGGAAAGAGCCGGGACACAGATAGGGTTTATCTAATAAATAGAGCCTGAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR GCA 90 bp | TCCTCTTATCAAGGTATTTGTGACATCTGGCTAATCAGGGTAATTTACAAACCGGGCAGTTTGATGTCCTaGATCTTACAGGCCTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSYQGICDIWLIRVIYKPGSLMS*ILQACS Trigger: GCTACAGGCCTGTAAGATGCAGGACATCAAACTGCC...CGGTTTGTAAATTACCCTGATTAGCCAGATGTCACAAATACCTTGATAAGAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CCA 90 bp | GAGAAGATGGACACAAGGGCAGATGAGGGATCCAGACAAGAAGATAGAGTTCCTCTGTATTCATGTAGCTaGACAACTTTGTTGTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: EKMDTRADEGSRQEDRVPLYSCS*TTLLLI Trigger: GATCAACAACAAAGTTGTCCAGCTACATGAATACAG...AGGAACTCTATCTTCTTGTCTGGATCCCTCATCTGCCCTTGTGTCCATCTTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CCA 90 bp | GAGAAGATGGACACAAGGGCAGATGAGGGATCCAGACAAGAAGATAGAGTTCCTTCTTCTTTCAATCGGTaGTATTTCTTTACCTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: EKMDTRADEGSRQEDRVPSSFNR*YFFTWF Trigger: GAACCAGGTAAAGAAATACCACCGATTGAAAGAAGA...AGGAACTCTATCTTCTTGTCTGGATCCCTCATCTGCCCTTGTGTCCATCTTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CCA 90 bp | TGCAAACAATCTAACATGCACACAAGCATAAGGGGCATGGTGTCAGGCGATCCACTTGAAGCTGAGCCATaGTTTCATCTATTATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: CKQSNMHTSIRGMVSGDPLEAEP*FHLLSS Trigger: TGAAGATAATAGATGAAACCATGGCTCAGCTTCAAG...TGGATCGCCTGACACCATGCCCCTTATGCTTGTGTGCATGTTAGATTGTTTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| 3UTR CAA 72 bp | TCTCCCTCTAGCTTCTTCTGCTCCTCTAGAGACTGCTaGCTAGTGGTAATATATTCTTCTAGCTTCTCAATC | + |
|
Preference number: 4 (lower is better) Translates to: SPSSFFCSSRDC*LVVIYSSSFSI Trigger: GATTGAGAAGCTAGAAGAATATATTACCACTAGCAAGCAGTCTCTAGAGGAGCAGAAGAAGCTAGAGGGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
||
| CDS-3UTR TCA 90 bp | TCCTCTTATCAAGGTATTTGTGACATCTGGCTAATCAGGGTAATTTACAAACCGTGCTCCTTGATATACTaGATACAGTCCCGACCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SSYQGICDIWLIRVIYKPCSLIY*IQSRPV Trigger: GACAGGTCGGGACTGTATTCAGTATATCAAGGAGCA...CGGTTTGTAAATTACCCTGATTAGCCAGATGTCACAAATACCTTGATAAGAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR TCA 90 bp | TCCTCTTATCAAGGTATTTGTGACATCTGGCTAATCAGGGTAATTTACAAACCGCTCCACGTTGCTCCTTaGTATACTGAATACAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SSYQGICDIWLIRVIYKPLHVAP*YTEYSP Trigger: GGGACTGTATTCAGTATATCAAGGAGCAACGTGGAG...CGGTTTGTAAATTACCCTGATTAGCCAGATGTCACAAATACCTTGATAAGAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR TCA 90 bp | TCCTCTTATCAAGGTATTTGTGACATCTGGCTAATCAGGGTAATTTACAAACCGCCCAAGCGAGTCTTCTaGTTCTCAAATTCCAAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: SSYQGICDIWLIRVIYKPPKRVF*FSNSKR Trigger: ACGCTTGGAATTTGAGAATCAGAAGACTCGCTTGGG...CGGTTTGTAAATTACCCTGATTAGCCAGATGTCACAAATACCTTGATAAGAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR TCA 90 bp | TTCCTCAGGCTCTATTTATTAGATAAACCCTATCTGTGTCCCGGCTCTTTCCCAACTTCCTTCTGTAAATaGGTCATTTCCTTGTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FLRLYLLDKPYLCPGSFPTSFCK*VISLLA Trigger: TGCCAACAAGGAAATGACTCATTTACAGAAGGAAGT...TGGGAAAGAGCCGGGACACAGATAGGGTTTATCTAATAAATAGAGCCTGAGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR GCA 90 bp | TCCTCTTATCAAGGTATTTGTGACATCTGGCTAATCAGGGTAATTTACAAACCGCACAAACAAGGGCATTaGCACAAGCATACTGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSYQGICDIWLIRVIYKPHKQGH*HKHTAE Trigger: CTCTGCAGTATGCTTGTGGCAATGCCCTTGTTTGTG...CGGTTTGTAAATTACCCTGATTAGCCAGATGTCACAAATACCTTGATAAGAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR GCA 90 bp | TCCTCTTATCAAGGTATTTGTGACATCTGGCTAATCAGGGTAATTTACAAACCGCACTTGACGCAGTTCTaGCTCTTTCCGTTTTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSYQGICDIWLIRVIYKPHLTQF*LFPFCL Trigger: AAGGCAAAACGGAAAGAGGCAGAACTGCGTCAAGTG...CGGTTTGTAAATTACCCTGATTAGCCAGATGTCACAAATACCTTGATAAGAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR TCA 90 bp | TCCTCTTATCAAGGTATTTGTGACATCTGGCTAATCAGGGTAATTTACAAACCGTTCTCAATCCGTTTCTaGTTCTCTTCAATCTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SSYQGICDIWLIRVIYKPFSIRF*FSSISR Trigger: GCGGGAGATTGAAGAGAATCAGAAACGGATTGAGAA...CGGTTTGTAAATTACCCTGATTAGCCAGATGTCACAAATACCTTGATAAGAGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR TCA 90 bp | TCCTCTTATCAAGGTATTTGTGACATCTGGCTAATCAGGGTAATTTACAAACCGGGTTCAGCTCCTTATTaGTCTCATCAATACGACGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSYQGICDIWLIRVIYKPGSAPY*SHQYDA Trigger: AGCGTCGTATTGATGAGATCAATAAGGAGCTGAACC...CGGTTTGTAAATTACCCTGATTAGCCAGATGTCACAAATACCTTGATAAGAGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR TCA 90 bp | TTCCTCAGGCTCTATTTATTAGATAAACCCTATCTGTGTCCCGGCTCTTTCCCATGGTCCTCCTTCAACTaGTTCTTTTCAAAATCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: FLRLYLLDKPYLCPGSFPWSSFN*FFSKSN Trigger: ATTGGATTTTGAAAAGAATCAGTTGAAGGAGGACCA...TGGGAAAGAGCCGGGACACAGATAGGGTTTATCTAATAAATAGAGCCTGAGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR TCA 90 bp | TCCTCTTATCAAGGTATTTGTGACATCTGGCTAATCAGGGTAATTTACAAACCGGAGCTACCTTCTTCCTaGCTAATATCATCCATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SSYQGICDIWLIRVIYKPELPSS*LISSMV Trigger: CACCATGGATGATATTAGTCAGGAAGAAGGTAGCTC...CGGTTTGTAAATTACCCTGATTAGCCAGATGTCACAAATACCTTGATAAGAGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CCA 90 bp | TCCTCTTATCAAGGTATTTGTGACATCTGGCTAATCAGGGTAATTTACAAACCGTGGTATTTCTTTACCTaGTTCTCCTCCAGGGTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSYQGICDIWLIRVIYKPWYFFT*FSSRVK Trigger: CTTGACCCTGGAGGAGAACCAGGTAAAGAAATACCA...CGGTTTGTAAATTACCCTGATTAGCCAGATGTCACAAATACCTTGATAAGAGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR TCA 90 bp | TCCTCTTATCAAGGTATTTGTGACATCTGGCTAATCAGGGTAATTTACAAACCGCTGCTTCGAGCTTCTTaGTTTTGTGGGATGTATTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSYQGICDIWLIRVIYKPLLRAS*FCGMYS Trigger: AGAATACATCCCACAAAATCAAGAAGCTCGAAGCAG...CGGTTTGTAAATTACCCTGATTAGCCAGATGTCACAAATACCTTGATAAGAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR GCA 90 bp | TCCTCTTATCAAGGTATTTGTGACATCTGGCTAATCAGGGTAATTTACAAACCGCTTTATCTGTTCAAATaGCTGCTTGGCCTTCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSYQGICDIWLIRVIYKPLYLFK*LLGLLC Trigger: GCAAAGAAGGCCAAGCAGGCATTTGAACAGATAAAG...CGGTTTGTAAATTACCCTGATTAGCCAGATGTCACAAATACCTTGATAAGAGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CCA 90 bp | TCCTCTTATCAAGGTATTTGTGACATCTGGCTAATCAGGGTAATTTACAAACCGTCTTCCCTAAAACCTTaGTCACAGCAATCTGATACT | + |
|
Preference number: 4 (lower is better) Translates to: SSYQGICDIWLIRVIYKPSSLKP*SQQSDT Trigger: AGTATCAGATTGCTGTGACCAAGGTTTTAGGGAAGA...CGGTTTGTAAATTACCCTGATTAGCCAGATGTCACAAATACCTTGATAAGAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CCA 90 bp | TCCTCTTATCAAGGTATTTGTGACATCTGGCTAATCAGGGTAATTTACAAACCGTCATTCAGCTTTTGCTaGAGTGTGTTCATTTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSYQGICDIWLIRVIYKPSFSFC*SVFISC Trigger: GCAAGAAATGAACACACTCCAGCAAAAGCTGAATGA...CGGTTTGTAAATTACCCTGATTAGCCAGATGTCACAAATACCTTGATAAGAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS TCA 90 bp | GGGCAAAGGTACGGTCCTCAGCACCCTCCTCCGAGTAGACCATGCTaGCAAAGGCTCGGTTGGCAGCCGGCTTGCCCACAGGTGCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: GQRYGPQHPPPSRPC*QRLGWQPACPQVLH Trigger: ATGGAGCACCTGTGGGCAAGCCGGCTGCCAACCGAGCCTTTGTCAGCATGGTCTACTCGGAGGAGGGTGCTGAGGACCGTACCTTTGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS GCA 90 bp | GACCATGCTGACAAAGGCTCGGTTGGCAGCCGGCTTGCCCACAGGTaGTCCATGTATCAGGTCCCGCAGGGTCTTTACCCTCAGGTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: DHADKGSVGSRLAHR*SMYQVPQGLYPQVA Trigger: AGCAACCTGAGGGTAAAGACCCTGCGGGACCTGATACATGGAGCACCTGTGGGCAAGCCGGCTGCCAACCGAGCCTTTGTCAGCATGGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CAA 90 bp | ACCCTATCTGTGTCCCGGCTCTTTCCCAGCAACCAAAACATCCAGCAACTCCCAACATCAATCACTAGCTaGGCCCCCTTCAGCTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: TLSVSRLFPSNQNIQQLPTSITS*APFSSR Trigger: CCGGGAGCTGAAGGGGGCCAAGCTAGTGATTGATGT...TGGGAGTTGCTGGATGTTTTGGTTGCTGGGAAAGAGCCGGGACACAGATAGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS GCA 90 bp | CCGCATTTGAAGCCCGTGGGCCTGAGACTGCACTTGACGCAGTTCTaGCTCTTTCCGTTTTGCCTTCATCTGCTCTTTCAGCTCCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PHLKPVGLRLHLTQF*LFPFCLHLLFQLLC Trigger: ACAGAGGAGCTGAAAGAGCAGATGAAGGCAAAACGGAAAGAGGCAGAACTGCGTCAAGTGCAGTCTCAGGCCCACGGGCTTCAAATGCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CAA 90 bp | TGCAAACAATCTAACATGCACACAAGCATAAGGGGCATGGTGTCAGGCGATCCACTGACAAAGGCTCGGTaGGCAGCCGGCTTGCCCACA | + |
|
Preference number: 5 (lower is better) Translates to: CKQSNMHTSIRGMVSGDPLTKAR*AAGLPT Trigger: TGTGGGCAAGCCGGCTGCCAACCGAGCCTTTGTCAG...TGGATCGCCTGACACCATGCCCCTTATGCTTGTGTGCATGTTAGATTGTTTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CAA 90 bp | GAGAAGATGGACACAAGGGCAGATGAGGGATCCAGACAAGAAGATAGAGTTCCTCAGGCCTGTAGCAGGTaGTGGCGGTCACTGCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: EKMDTRADEGSRQEDRVPQACSR*WRSLRF Trigger: GAAGCGCAGTGACCGCCACAACCTGCTACAGGCCTG...AGGAACTCTATCTTCTTGTCTGGATCCCTCATCTGCCCTTGTGTCCATCTTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CAA 90 bp | ACCCTATCTGTGTCCCGGCTCTTTCCCAGCAACCAAAACATCCAGCAACTCCCATCATTGGGGTTGGGGTaGGCATCTGGGTACTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: TLSVSRLFPSNQNIQQLPSLGLG*ASGYLV Trigger: CACCAAGTACCCAGATGCCAACCCCAACCCCAATGA...TGGGAGTTGCTGGATGTTTTGGTTGCTGGGAAAGAGCCGGGACACAGATAGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CAA 90 bp | ACCCTATCTGTGTCCCGGCTCTTTCCCAGCAACCAAAACATCCAGCAACTCCCAGACTTACCAGAGCCATaGGGTCCAATGATGGCGGTA | + |
|
Preference number: 5 (lower is better) Translates to: TLSVSRLFPSNQNIQQLPDLPEP*GPMMAV Trigger: TACCGCCATCATTGGACCCAATGGCTCTGGTAAGTC...TGGGAGTTGCTGGATGTTTTGGTTGCTGGGAAAGAGCCGGGACACAGATAGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CAA 90 bp | ACCCTATCTGTGTCCCGGCTCTTTCCCAGCAACCAAAACATCCAGCAACTCCCACACTGTCTTGTGGCGTaGGTGACCTCCAAAGGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: TLSVSRLFPSNQNIQQLPHCLVA*VTSKGN Trigger: ATTGCCTTTGGAGGTCACCAACGCCACAAGACAGTG...TGGGAGTTGCTGGATGTTTTGGTTGCTGGGAAAGAGCCGGGACACAGATAGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CAA 90 bp | GGGGGTAATGATATCCAGGAGAGAAGATGGACACAAGGGCAGATGAGGGATCCACCTGCTTGGCCTTCTTaGCTCGCTTTCGTGCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: GGNDIQERRWTQGQMRDPPAWPS*LAFVLL Trigger: AAGCAGCACGAAAGCGAGCAAAGAAGGCCAAGCAGG...TGGATCCCTCATCTGCCCTTGTGTCCATCTTCTCTCCTGGATATCATTACCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CAA 90 bp | GGGGGTAATGATATCCAGGAGAGAAGATGGACACAAGGGCAGATGAGGGATCCAGCCACCTTGCCAATGTaGGTGTTATCCAAGGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: GGNDIQERRWTQGQMRDPATLPM*VLSKAA Trigger: CGCTGCCTTGGATAACACCAACATTGGCAAGGTGGC...TGGATCCCTCATCTGCCCTTGTGTCCATCTTCTCTCCTGGATATCATTACCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS GCA 90 bp | CTAATATCATCCATGGTGCCCTTTGACAGTGGCAGTTTGATGTCCTaGATCTTACAGGCCTGTAGCAGGTTGTGGCGGTCACTGCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LISSMVPFDSGSLMS*ILQACSRLWRSLRF Trigger: GAAGCGCAGTGACCGCCACAACCTGCTACAGGCCTGTAAGATGCAGGACATCAAACTGCCACTGTCAAAGGGCACCATGGATGATATTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS CCA 90 bp | AGTGGCAGTTTGATGTCCTGCATCTTACAGGCCTGTAGCAGGTTGTaGCGGTCACTGCGCTTCTGTTCAAGTTTGGTCTCAATGGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SGSLMSCILQACSRL*RSLRFCSSLVSMAV Trigger: GACAGCCATTGAGACCAAACTTGAACAGAAGCGCAGTGACCGCCACAACCTGCTACAGGCCTGTAAGATGCAGGACATCAAACTGCCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CAA 90 bp | ACCCTATCTGTGTCCCGGCTCTTTCCCAGCAACCAAAACATCCAGCAACTCCCATTCGAGGCCAGTTCCTaGTTGAGCTTCTCAATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TLSVSRLFPSNQNIQQLPFEASS*LSFSIS Trigger: GGAGATTGAGAAGCTCAACAAGGAACTGGCCTCGAA...TGGGAGTTGCTGGATGTTTTGGTTGCTGGGAAAGAGCCGGGACACAGATAGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CAA 90 bp | GAGAAGATGGACACAAGGGCAGATGAGGGATCCAGACAAGAAGATAGAGTTCCTCGCCGTGCTTTTGCCTaGAGATCACTGGCTCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: EKMDTRADEGSRQEDRVPRRAFA*RSLAPP Trigger: TGGTGGAGCCAGTGATCTCAAGGCAAAAGCACGGCG...AGGAACTCTATCTTCTTGTCTGGATCCCTCATCTGCCCTTGTGTCCATCTTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CAA 90 bp | GAGAAGATGGACACAAGGGCAGATGAGGGATCCAGACAAGAAGATAGAGTTCCTATGCGAGGCCCGAAGTaGGCTAGTTCACTCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: EKMDTRADEGSRQEDRVPMRGPK*ASSLSS Trigger: GCTGGAGAGTGAACTAGCCAACTTCGGGCCTCGCAT...AGGAACTCTATCTTCTTGTCTGGATCCCTCATCTGCCCTTGTGTCCATCTTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CAA 90 bp | TGCAAACAATCTAACATGCACACAAGCATAAGGGGCATGGTGTCAGGCGATCCAGAGGTCTCCTGGAACTaGTCTCGGACACTCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CKQSNMHTSIRGMVSGDPEVSWN*SRTLSS Trigger: GCTGGAGAGTGTCCGAGACAAGTTCCAGGAGACCTC...TGGATCGCCTGACACCATGCCCCTTATGCTTGTGTGCATGTTAGATTGTTTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CAA 90 bp | GGGGGTAATGATATCCAGGAGAGAAGATGGACACAAGGGCAGATGAGGGATCCATTGGCATCTGGGTACTaGGTGAGGTCGAAAGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GGNDIQERRWTQGQMRDPLASGY*VRSKVR Trigger: CCTGACTTTCGACCTCACCAAGTACCCAGATGCCAA...TGGATCCCTCATCTGCCCTTGTGTCCATCTTCTCTCCTGGATATCATTACCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CAA 90 bp | GGGGGTAATGATATCCAGGAGAGAAGATGGACACAAGGGCAGATGAGGGATCCACGCCTCTTCCTTTTCTaGTTTGGCCTCCTTTCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GGNDIQERRWTQGQMRDPRLFLF*FGLLSF Trigger: GAACGAAAGGAGGCCAAACAAGAAAAGGAAGAGGCG...TGGATCCCTCATCTGCCCTTGTGTCCATCTTCTCTCCTGGATATCATTACCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CAA 90 bp | GGGGGTAATGATATCCAGGAGAGAAGATGGACACAAGGGCAGATGAGGGATCCAGAGGCCAGTTCCTTGTaGAGCTTCTCAATCTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: GGNDIQERRWTQGQMRDPEASSL*SFSIST Trigger: AGTGGAGATTGAGAAGCTCAACAAGGAACTGGCCTC...TGGATCCCTCATCTGCCCTTGTGTCCATCTTCTCTCCTGGATATCATTACCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CAA 90 bp | ACCCTATCTGTGTCCCGGCTCTTTCCCAGCAACCAAAACATCCAGCAACTCCCACTCAGGCTCTCCACGTaGCTCCTTGATATACTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: TLSVSRLFPSNQNIQQLPLRLST*LLDILN Trigger: ATTCAGTATATCAAGGAGCAACGTGGAGAGCCTGAG...TGGGAGTTGCTGGATGTTTTGGTTGCTGGGAAAGAGCCGGGACACAGATAGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS TCA 90 bp | GGCCTCTCGAGCATAGATACTGGATGTTCTCTGGGAACCACTCACTaGCTCTTCTCCCTGGGAGCTACCTTCTTCCTGACTAATATCATC | + |
|
Preference number: 5 (lower is better) Translates to: GLSSIDTGCSLGTTH*LFSLGATFFLTNII Trigger: GATGATATTAGTCAGGAAGAAGGTAGCTCCCAGGGAGAAGAGTCAGTGAGTGGTTCCCAGAGAACATCCAGTATCTATGCTCGAGAGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS TCA 90 bp | GTGCATCCTTCAGATCTTCACACAGGTCACCGTAGTCAATCTCAATaGGGGCCTCTCGAGCATAGATACTGGATGTTCTCTGGGAACCAC | + |
|
Preference number: 5 (lower is better) Translates to: VHPSDLHTGHRSQSQ*GPLEHRYWMFSGNH Trigger: GTGGTTCCCAGAGAACATCCAGTATCTATGCTCGAGAGGCCCTCATTGAGATTGACTACGGTGACCTGTGTGAAGATCTGAAGGATGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CAA 90 bp | AGAGCCAGGGTAGAGACGCTTGATGCTTTCCATTATTTCTGCCTTTCGCTGCTGAGAGCTGTCCTCTCCTaGGGGTTCTTCATGGCAATA | + |
|
Preference number: 5 (lower is better) Translates to: RARVETLDAFHYFCLSLLRAVLS*GFFMAI Trigger: TATTGCCATGAAGAACCCCAAGGAGAGGACAGCTCT...CAGCAGCGAAAGGCAGAAATAATGGAAAGCATCAAGCGTCTCTACCCTGGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
||
| CDS-3UTR CAA 90 bp | GGGGGTAATGATATCCAGGAGAGAAGATGGACACAAGGGCAGATGAGGGATCCATCCCGCAGTTTTTGCTaGATCTTGGCCTCTGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GGNDIQERRWTQGQMRDPSRSFC*ILASVS Trigger: AGAAACAGAGGCCAAGATCAAGCAAAAACTGCGGGA...TGGATCCCTCATCTGCCCTTGTGTCCATCTTCTCTCCTGGATATCATTACCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS TCA 90 bp | CCACTGCACCCAGAGCCATTGGGTCCAATGATGGCGGTAAACCTCTaGAATGGTCCGATAATCTGTCGACCCTTGTACGATTTAAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: PLHPEPLGPMMAVNL*NGPIICRPLYDLKF Trigger: GAACTTTAAATCGTACAAGGGTCGACAGATTATCGGACCATTTCAGAGGTTTACCGCCATCATTGGACCCAATGGCTCTGGGTGCAGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
||
| CDS GCA 90 bp | GCAAGCATTGAATCGGTCGAAGCGCTCCTTCTTTATCTGTTCAAATaGCTGCTTGGCCTTCTTTGCTCGCTTTCGTGCTGCTTCAAACTC | + |
|
Preference number: 5 (lower is better) Translates to: ASIESVEALLLYLFK*LLGLLCSLSCCFKL Trigger: GAGTTTGAAGCAGCACGAAAGCGAGCAAAGAAGGCCAAGCAGGCATTTGAACAGATAAAGAAGGAGCGCTTCGACCGATTCAATGCTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS CCA 90 bp | GCAGGTTGTGGCGGTCACTGCGCTTCTGTTCAAGTTTGGTCTCAATaGCTGTCACTTCCTTCTGTAAATGAGTCATTTCCTTGTTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: AGCGGHCASVQVWSQ*LSLPSVNESFPCWH Trigger: GTGCCAACAAGGAAATGACTCATTTACAGAAGGAAGTGACAGCCATTGAGACCAAACTTGAACAGAAGCGCAGTGACCGCCACAACCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS CCA 90 bp | AGGCCTGTAGCAGGTTGTGGCGGTCACTGCGCTTCTGTTCAAGTTTaGTCTCAATGGCTGTCACTTCCTTCTGTAAATGAGTCATTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RPVAGCGGHCASVQV*SQWLSLPSVNESFP Trigger: AGGAAATGACTCATTTACAGAAGGAAGTGACAGCCATTGAGACCAAACTTGAACAGAAGCGCAGTGACCGCCACAACCTGCTACAGGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CAA 90 bp | GGGGGTAATGATATCCAGGAGAGAAGATGGACACAAGGGCAGATGAGGGATCCAAGGAAGTTACGAGCTTaGATGAGAATGCCCAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: GGNDIQERRWTQGQMRDPRKLRA*MRMPNF Trigger: GAAGTTGGGCATTCTCATCAAAGCTCGTAACTTCCT...TGGATCCCTCATCTGCCCTTGTGTCCATCTTCTCTCCTGGATATCATTACCCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CAA 90 bp | ACCCTATCTGTGTCCCGGCTCTTTCCCAGCAACCAAAACATCCAGCAACTCCCAAAAGTAGCTGCTCTCTaGCTGGCTTCTTCTTTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: TLSVSRLFPSNQNIQQLPKVAAL*LASSFN Trigger: ATTGAAAGAAGAAGCCAGCAAGAGAGCAGCTACTTT...TGGGAGTTGCTGGATGTTTTGGTTGCTGGGAAAGAGCCGGGACACAGATAGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CAA 90 bp | TTCCTCAGGCTCTATTTATTAGATAAACCCTATCTGTGTCCCGGCTCTTTCCCATCCCCGCCTGACAAATaGTCCATAGGCCGGAAACGT | + |
|
Preference number: 5 (lower is better) Translates to: FLRLYLLDKPYLCPGSFPSPPDK*SIGRKR Trigger: ACGTTTCCGGCCTATGGACAATTTGTCAGGCGGGGA...TGGGAAAGAGCCGGGACACAGATAGGGTTTATCTAATAAATAGAGCCTGAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CAA 90 bp | TGCAAACAATCTAACATGCACACAAGCATAAGGGGCATGGTGTCAGGCGATCCAGATCACACAGTCCCCTaGCTCAGGATAGACTCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: CKQSNMHTSIRGMVSGDPDHTVP*LRIDSN Trigger: ATTGGAGTCTATCCTGAGCAAGGGGACTGTGTGATC...TGGATCGCCTGACACCATGCCCCTTATGCTTGTGTGCATGTTAGATTGTTTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS CCA 90 bp | GCACCCAGAGCCATTGGGTCCAATGATGGCGGTAAACCTCTGAAATaGTCCGATAATCTGTCGACCCTTGTACGATTTAAAGTTCTCGAT | + |
|
Preference number: 5 (lower is better) Translates to: APRAIGSNDGGKPLK*SDNLSTLVRFKVLD Trigger: ATCGAGAACTTTAAATCGTACAAGGGTCGACAGATTATCGGACCATTTCAGAGGTTTACCGCCATCATTGGACCCAATGGCTCTGGGTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
||
| CDS-3UTR CAA 90 bp | GAGAAGATGGACACAAGGGCAGATGAGGGATCCAGACAAGAAGATAGAGTTCCTTCCGAGTCCTTTTCCTaGATCTCCTTCTCAATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: EKMDTRADEGSRQEDRVPSESFS*ISFSIC Trigger: GCAGATTGAGAAGGAGATCAAGGAAAAGGACTCGGA...AGGAACTCTATCTTCTTGTCTGGATCCCTCATCTGCCCTTGTGTCCATCTTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CAA 90 bp | ACCCTATCTGTGTCCCGGCTCTTTCCCAGCAACCAAAACATCCAGCAACTCCCAAGTTTTTGCTTGATCTaGGCCTCTGTTTCTACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TLSVSRLFPSNQNIQQLPSFCLI*ASVSTF Trigger: GAAAGTAGAAACAGAGGCCAAGATCAAGCAAAAACT...TGGGAGTTGCTGGATGTTTTGGTTGCTGGGAAAGAGCCGGGACACAGATAGGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
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| CDS-3UTR CAA 90 bp | TGCAAACAATCTAACATGCACACAAGCATAAGGGGCATGGTGTCAGGCGATCCAAATCTCCCGCAGTTTTaGCTTGATCTTGGCCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: CKQSNMHTSIRGMVSGDPNLPQF*LDLGLC Trigger: ACAGAGGCCAAGATCAAGCAAAAACTGCGGGAGATT...TGGATCGCCTGACACCATGCCCCTTATGCTTGTGTGCATGTTAGATTGTTTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CAA 90 bp | GAGAAGATGGACACAAGGGCAGATGAGGGATCCAGACAAGAAGATAGAGTTCCTTCACAAACAAGGGCATaGCCACAAGCATACTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: EKMDTRADEGSRQEDRVPSQTRA*PQAYCR Trigger: TCTGCAGTATGCTTGTGGCAATGCCCTTGTTTGTGA...AGGAACTCTATCTTCTTGTCTGGATCCCTCATCTGCCCTTGTGTCCATCTTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CAA 90 bp | ACCCTATCTGTGTCCCGGCTCTTTCCCAGCAACCAAAACATCCAGCAACTCCCACTCTGTATGATTCTCTaGATATCATTAATGCGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: TLSVSRLFPSNQNIQQLPLCMIL*ISLMRG Trigger: GCCTCGCATTAATGATATCAAGAGAATCATACAGAG...TGGGAGTTGCTGGATGTTTTGGTTGCTGGGAAAGAGCCGGGACACAGATAGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CAA 90 bp | TTCCTCAGGCTCTATTTATTAGATAAACCCTATCTGTGTCCCGGCTCTTTCCCAATAGGCCGGAAACGTTaGCCAGGAGCTACACAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: FLRLYLLDKPYLCPGSFPIGRKR*PGATQL Trigger: CAACTGTGTAGCTCCTGGCAAACGTTTCCGGCCTAT...TGGGAAAGAGCCGGGACACAGATAGGGTTTATCTAATAAATAGAGCCTGAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CAA 90 bp | GAGAAGATGGACACAAGGGCAGATGAGGGATCCAGACAAGAAGATAGAGTTCCTACAATGGCCTGGAAGTaGCAAGTTGACTGTTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: EKMDTRADEGSRQEDRVPTMAWK*QVDCSL Trigger: CAAGGAACAGTCAACTTGCAACTTCCAGGCCATTGT...AGGAACTCTATCTTCTTGTCTGGATCCCTCATCTGCCCTTGTGTCCATCTTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CAA 90 bp | TCCTCTAGAGACTGCTTGCTAGTGGTAATATATTCTTCTAGCTTCTCAATCCGTCTGCACCCAGAGCCATaGGGTCCAATGATGGCGGTA | + |
|
Preference number: 5 (lower is better) Translates to: SSRDCLLVVIYSSSFSIRLHPEP*GPMMAV Trigger: TACCGCCATCATTGGACCCAATGGCTCTGGGTGCAG...ACGGATTGAGAAGCTAGAAGAATATATTACCACTAGCAAGCAGTCTCTAGAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
||
| CDS GCA 90 bp | AGTTCACTCTCCAGCTTAGACTTTTCCTGGAGATTCAGGGCAAGATaGCTTGTCTTAGTCTGTTCTAGGTCACTCTGTGAGTACTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SSLSSLDFSWRFRAR*LVLVCSRSLCEYFS Trigger: GCTGAAGTACTCACAGAGTGACCTAGAACAGACTAAGACAAGGCATCTTGCCCTGAATCTCCAGGAAAAGTCTAAGCTGGAGAGTGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
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| CDS-3UTR CAA 90 bp | GAGAAGATGGACACAAGGGCAGATGAGGGATCCAGACAAGAAGATAGAGTTCCTACTTTGTTGTTGATCTaGTACTCAGAAGAGCCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: EKMDTRADEGSRQEDRVPTLLLI*YSEEPP Trigger: AGGGGGCTCTTCTGAGTACAAGATCAACAACAAAGT...AGGAACTCTATCTTCTTGTCTGGATCCCTCATCTGCCCTTGTGTCCATCTTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CAA 90 bp | TTCCTCAGGCTCTATTTATTAGATAAACCCTATCTGTGTCCCGGCTCTTTCCCAAGAGCTGTCCTCTCCTaGGGGTTCTTCATGGCAATA | + |
|
Preference number: 5 (lower is better) Translates to: FLRLYLLDKPYLCPGSFPRAVLS*GFFMAI Trigger: TATTGCCATGAAGAACCCCAAGGAGAGGACAGCTCT...TGGGAAAGAGCCGGGACACAGATAGGGTTTATCTAATAAATAGAGCCTGAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CAA 90 bp | GAGAAGATGGACACAAGGGCAGATGAGGGATCCAGACAAGAAGATAGAGTTCCTTTGTCCATCCGCTTCTaGTCCTTCTCAATTTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: EKMDTRADEGSRQEDRVPLSIRF*SFSISL Trigger: CAAGGAAATTGAGAAGGACAAGAAGCGGATGGACAA...AGGAACTCTATCTTCTTGTCTGGATCCCTCATCTGCCCTTGTGTCCATCTTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CAA 90 bp | TCCTCTTATCAAGGTATTTGTGACATCTGGCTAATCAGGGTAATTTACAAACCGGTACTTCAGCCGCATTaGAAGCCCGTGGGCCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SSYQGICDIWLIRVIYKPVLQPH*KPVGLR Trigger: TCTCAGGCCCACGGGCTTCAAATGCGGCTGAAGTAC...CGGTTTGTAAATTACCCTGATTAGCCAGATGTCACAAATACCTTGATAAGAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CAA 90 bp | GAGAAGATGGACACAAGGGCAGATGAGGGATCCAGACAAGAAGATAGAGTTCCTCTGATTCTTAAGGTCTaGAAGCTGAGCCATGGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: EKMDTRADEGSRQEDRVPLILKV*KLSHGF Trigger: GAAACCATGGCTCAGCTTCAAGACCTTAAGAATCAG...AGGAACTCTATCTTCTTGTCTGGATCCCTCATCTGCCCTTGTGTCCATCTTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CAA 90 bp | GAGAAGATGGACACAAGGGCAGATGAGGGATCCAGACAAGAAGATAGAGTTCCTGTGTTCATTTCTTGCTaGATTTCTTCCTCCGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: EKMDTRADEGSRQEDRVPVFISC*ISSSAC Trigger: ACAGGCGGAGGAAGAAATCAAGCAAGAAATGAACAC...AGGAACTCTATCTTCTTGTCTGGATCCCTCATCTGCCCTTGTGTCCATCTTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CAA 90 bp | AGTTTGTCTACTGCTTTCTCATCCCAGCGCCGTGCTTTTGCCTTGAGATCACTGATAATCTGTCGACCCTaGTACGATTTAAAGTTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: SLSTAFSSQRRAFALRSLIICRP*YDLKFS Trigger: CGAGAACTTTAAATCGTACAAGGGTCGACAGATTAT...CAGTGATCTCAAGGCAAAAGCACGGCGCTGGGATGAGAAAGCAGTAGACAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145518.8 |
||
| CDS TCA 90 bp | TTCTGTTCAAGTTTGGTCTCAATGGCTGTCACTTCCTTCTGTAAATaGGTCATTTCCTTGTTGGCACCCCCAAGCTTCTTGCGAATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: FCSSLVSMAVTSFCK*VISLLAPPSFLRIS Trigger: AGAGATTCGCAAGAAGCTTGGGGGTGCCAACAAGGAAATGACTCATTTACAGAAGGAAGTGACAGCCATTGAGACCAAACTTGAACAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CAA 90 bp | TGCAAACAATCTAACATGCACACAAGCATAAGGGGCATGGTGTCAGGCGATCCAATAATCTGTCGACCCTaGTACGATTTAAAGTTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: CKQSNMHTSIRGMVSGDPIICRP*YDLKFS Trigger: CGAGAACTTTAAATCGTACAAGGGTCGACAGATTAT...TGGATCGCCTGACACCATGCCCCTTATGCTTGTGTGCATGTTAGATTGTTTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CAA 90 bp | TGCAAACAATCTAACATGCACACAAGCATAAGGGGCATGGTGTCAGGCGATCCAATTTCTTTCTTTCGCTaGTCATACTCCTGTGCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: CKQSNMHTSIRGMVSGDPISFFR*SYSCAS Trigger: ACTTGCACAGGAGTATGACAAGCGAAAGAAAGAAAT...TGGATCGCCTGACACCATGCCCCTTATGCTTGTGTGCATGTTAGATTGTTTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CAA 90 bp | TTCCTCAGGCTCTATTTATTAGATAAACCCTATCTGTGTCCCGGCTCTTTCCCAAATCTGATACTTCTTTaGTGTAGGCTGGCAGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: FLRLYLLDKPYLCPGSFPNLILL*CRLAEV Trigger: GACCTCTGCCAGCCTACACAAAAGAAGTATCAGATT...TGGGAAAGAGCCGGGACACAGATAGGGTTTATCTAATAAATAGAGCCTGAGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CAA 90 bp | TTCCTCAGGCTCTATTTATTAGATAAACCCTATCTGTGTCCCGGCTCTTTCCCAAATTCCAAGCGTTTCTaGGCAATTTCATTCTGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: FLRLYLLDKPYLCPGSFPNSKRF*AISFCR Trigger: GCGGCAGAATGAAATTGCCAAGAAACGCTTGGAATT...TGGGAAAGAGCCGGGACACAGATAGGGTTTATCTAATAAATAGAGCCTGAGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CAA 90 bp | TCCTCTTATCAAGGTATTTGTGACATCTGGCTAATCAGGGTAATTTACAAACCGGCACCCCCAAGCTTCTaGCGAATCTCTTCCATCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SSYQGICDIWLIRVIYKPAPPSF*RISSIS Trigger: TGAGATGGAAGAGATTCGCAAGAAGCTTGGGGGTGC...CGGTTTGTAAATTACCCTGATTAGCCAGATGTCACAAATACCTTGATAAGAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CAA 90 bp | TTCCTCAGGCTCTATTTATTAGATAAACCCTATCTGTGTCCCGGCTCTTTCCCATTTGACAGTGGCAGTTaGATGTCCTGCATCTTACAG | + |
|
Preference number: 5 (lower is better) Translates to: FLRLYLLDKPYLCPGSFPFDSGS*MSCILQ Trigger: CTGTAAGATGCAGGACATCAAACTGCCACTGTCAAA...TGGGAAAGAGCCGGGACACAGATAGGGTTTATCTAATAAATAGAGCCTGAGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS TCA 90 bp | GAATTCCTCCTTGAGAGAGATAACAATGGCCTGGAAGTTGCAAGTTaGCTGTTCCTTGATGTAATTTGCCACCTTGCCAATGTTGGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: EFLLERDNNGLEVAS*LFLDVICHLANVGV Trigger: AACACCAACATTGGCAAGGTGGCAAATTACATCAAGGAACAGTCAACTTGCAACTTCCAGGCCATTGTTATCTCTCTCAAGGAGGAATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CAA 90 bp | TCCTCTTATCAAGGTATTTGTGACATCTGGCTAATCAGGGTAATTTACAAACCGTCGAAAGTCAGGACTTaGCTGATCACACAGTCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: SSYQGICDIWLIRVIYKPSKVRT*LITQSP Trigger: AGGGGACTGTGTGATCAGCAAAGTCCTGACTTTCGA...CGGTTTGTAAATTACCCTGATTAGCCAGATGTCACAAATACCTTGATAAGAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS GCA 90 bp | TATCCTGGTCCTCCTTCAACTGATTCTTTTCAAAATCCAATTGGATaGCCAAGCGAGTCTTCTGATTCTCAAATTCCAAGCGTTTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: YPGPPSTDSFQNPIG*PSESSDSQIPSVSW Trigger: CCAAGAAACGCTTGGAATTTGAGAATCAGAAGACTCGCTTGGGCATCCAATTGGATTTTGAAAAGAATCAGTTGAAGGAGGACCAGGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS CCA 90 bp | ATGAGAATGCCCAACTTCTCTAACTCTTCACTGTATTCATGTAGCTaGACAACTTTGTTGTTGATCTTGTACTCAGAAGAGCCCCCTACA | + |
|
Preference number: 5 (lower is better) Translates to: MRMPNFSNSSLYSCS*TTLLLILYSEEPPT Trigger: TGTAGGGGGCTCTTCTGAGTACAAGATCAACAACAAAGTTGTCCAGCTACATGAATACAGTGAAGAGTTAGAGAAGTTGGGCATTCTCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CAA 90 bp | TTCCTCAGGCTCTATTTATTAGATAAACCCTATCTGTGTCCCGGCTCTTTCCCATGTAGCTGGACAACTTaGTTGTTGATCTTGTACTCA | + |
|
Preference number: 5 (lower is better) Translates to: FLRLYLLDKPYLCPGSFPCSWTT*LLILYS Trigger: TGAGTACAAGATCAACAACAAAGTTGTCCAGCTACA...TGGGAAAGAGCCGGGACACAGATAGGGTTTATCTAATAAATAGAGCCTGAGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CAA 90 bp | TCCTCTTATCAAGGTATTTGTGACATCTGGCTAATCAGGGTAATTTACAAACCGTCATCAATACGACGCTaGGCCATCTCTACTTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSYQGICDIWLIRVIYKPSSIRR*AISTSS Trigger: GGAAGAAGTAGAGATGGCCAAGCGTCGTATTGATGA...CGGTTTGTAAATTACCCTGATTAGCCAGATGTCACAAATACCTTGATAAGAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CAA 90 bp | TCCTCTTATCAAGGTATTTGTGACATCTGGCTAATCAGGGTAATTTACAAACCGTGTTCAAATGCCTGCTaGGCCTTCTTTGCTCGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SSYQGICDIWLIRVIYKPCSNAC*AFFARF Trigger: AAAGCGAGCAAAGAAGGCCAAGCAGGCATTTGAACA...CGGTTTGTAAATTACCCTGATTAGCCAGATGTCACAAATACCTTGATAAGAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CAA 90 bp | TCCTCTTATCAAGGTATTTGTGACATCTGGCTAATCAGGGTAATTTACAAACCGGCTGCTTCGAGCTTCTaGATTTTGTGGGATGTATTC | + |
|
Preference number: 5 (lower is better) Translates to: SSYQGICDIWLIRVIYKPAASSF*ILWDVF Trigger: GAATACATCCCACAAAATCAAGAAGCTCGAAGCAGC...CGGTTTGTAAATTACCCTGATTAGCCAGATGTCACAAATACCTTGATAAGAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CAA 90 bp | TTCCTCAGGCTCTATTTATTAGATAAACCCTATCTGTGTCCCGGCTCTTTCCCATATCTTCATGTGTCTTaGTTCCTCCTTCTTAAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: FLRLYLLDKPYLCPGSFPYLHVS*FLLLKL Trigger: AAGCTTAAGAAGGAGGAACAAAGACACATGAAGATA...TGGGAAAGAGCCGGGACACAGATAGGGTTTATCTAATAAATAGAGCCTGAGGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CAA 90 bp | TCCTCTTATCAAGGTATTTGTGACATCTGGCTAATCAGGGTAATTTACAAACCGCTGCTCATTCAGCTTTaGCTGGAGTGTGTTCATTTC | + |
|
Preference number: 5 (lower is better) Translates to: SSYQGICDIWLIRVIYKPLLIQL*LECVHF Trigger: GAAATGAACACACTCCAGCAAAAGCTGAATGAGCAG...CGGTTTGTAAATTACCCTGATTAGCCAGATGTCACAAATACCTTGATAAGAGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CAA 90 bp | TCCTCTTATCAAGGTATTTGTGACATCTGGCTAATCAGGGTAATTTACAAACCGCTTTTCAAAATCCAATaGGATGCCCAAGCGAGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SSYQGICDIWLIRVIYKPLFKIQ*DAQASL Trigger: AAGACTCGCTTGGGCATCCAATTGGATTTTGAAAAG...CGGTTTGTAAATTACCCTGATTAGCCAGATGTCACAAATACCTTGATAAGAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CAA 90 bp | TCCTCTTATCAAGGTATTTGTGACATCTGGCTAATCAGGGTAATTTACAAACCGTGGACAACTTTGTTGTaGATCTTGTACTCAGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SSYQGICDIWLIRVIYKPWTTLL*ILYSEE Trigger: CTCTTCTGAGTACAAGATCAACAACAAAGTTGTCCA...CGGTTTGTAAATTACCCTGATTAGCCAGATGTCACAAATACCTTGATAAGAGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CAA 90 bp | TCCTCTTATCAAGGTATTTGTGACATCTGGCTAATCAGGGTAATTTACAAACCGAGCTGGACAACTTTGTaGTTGATCTTGTACTCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SSYQGICDIWLIRVIYKPSWTTL*LILYSE Trigger: TTCTGAGTACAAGATCAACAACAAAGTTGTCCAGCT...CGGTTTGTAAATTACCCTGATTAGCCAGATGTCACAAATACCTTGATAAGAGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS-3UTR CAA 90 bp | TCCTCTTATCAAGGTATTTGTGACATCTGGCTAATCAGGGTAATTTACAAACCGTCGAGCTTCTTGATTTaGTGGGATGTATTCTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SSYQGICDIWLIRVIYKPSSFLI*WDVFSF Trigger: AAAAGAGAATACATCCCACAAAATCAAGAAGCTCGA...CGGTTTGTAAATTACCCTGATTAGCCAGATGTCACAAATACCTTGATAAGAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS TCA 72 bp | TACGGTCCTCAGCACCCTCCTCCGAGTAGACCATGCTaGCAAAGGCTCGGTTGGCAGCCGGCTTGCCCACAG | + |
|
Preference number: 6 (lower is better) Translates to: YGPQHPPPSRPC*QRLGWQPACPQ Trigger: CTGTGGGCAAGCCGGCTGCCAACCGAGCCTTTGTCAGCATGGTCTACTCGGAGGAGGGTGCTGAGGACCGTA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS GCA 72 bp | GACAAAGGCTCGGTTGGCAGCCGGCTTGCCCACAGGTaGTCCATGTATCAGGTCCCGCAGGGTCTTTACCCT | + |
|
Preference number: 6 (lower is better) Translates to: DKGSVGSRLAHR*SMYQVPQGLYP Trigger: AGGGTAAAGACCCTGCGGGACCTGATACATGGAGCACCTGTGGGCAAGCCGGCTGCCAACCGAGCCTTTGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS CCA 72 bp | GGCAGCGTCAATCTCATCCAGGACGAAGAAGGGGGCTaGCTTGTAGCTATGGATGGCAAAAAGCAAGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GSVNLIQDEEGG*LVAMDGKKQGQ Trigger: CTGGCCTTGCTTTTTGCCATCCATAGCTACAAGCCAGCCCCCTTCTTCGTCCTGGATGAGATTGACGCTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS CAA 72 bp | GCCAGAGCTGCAACTGTCTTCTCCCCGCCTGACAAATaGTCCATAGGCCGGAAACGTTTGCCAGGAGCTACA | + |
|
Preference number: 6 (lower is better) Translates to: ARAATVFSPPDK*SIGRKRLPGAT Trigger: TGTAGCTCCTGGCAAACGTTTCCGGCCTATGGACAATTTGTCAGGCGGGGAGAAGACAGTTGCAGCTCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS GCA 72 bp | AAGCCCGTGGGCCTGAGACTGCACTTGACGCAGTTCTaGCTCTTTCCGTTTTGCCTTCATCTGCTCTTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: KPVGLRLHLTQF*LFPFCLHLLFQ Trigger: CTGAAAGAGCAGATGAAGGCAAAACGGAAAGAGGCAGAACTGCGTCAAGTGCAGTCTCAGGCCCACGGGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS GCA 72 bp | TCCATGGTGCCCTTTGACAGTGGCAGTTTGATGTCCTaGATCTTACAGGCCTGTAGCAGGTTGTGGCGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SMVPFDSGSLMS*ILQACSRLWRS Trigger: TGACCGCCACAACCTGCTACAGGCCTGTAAGATGCAGGACATCAAACTGCCACTGTCAAAGGGCACCATGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS GCA 72 bp | GCATCTTACAGGCCTGTAGCAGGTTGTGGCGGTCACTaGGCTTCTGTTCAAGTTTGGTCTCAATGGCTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: ASYRPVAGCGGH*ASVQVWSQWLS Trigger: TGACAGCCATTGAGACCAAACTTGAACAGAAGCGCAGTGACCGCCACAACCTGCTACAGGCCTGTAAGATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS CAA 72 bp | CCATGTATCAGGTCCCGCAGGGTCTTTACCCTCAGGTaGCTGGTCTTTTCACCAAGCACAAAGCTGATGGCA | + |
|
Preference number: 6 (lower is better) Translates to: PCIRSRRVFTLR*LVFSPSTKLMA Trigger: TGCCATCAGCTTTGTGCTTGGTGAAAAGACCAGCAACCTGAGGGTAAAGACCCTGCGGGACCTGATACATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS CAA 72 bp | CGTGCTGCTTCAAACTCATCTGAGGTCTCCTGGAACTaGTCTCGGACACTCTCCAGCTTTTCCATGGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: RAASNSSEVSWN*SRTLSSFSMAF Trigger: GAAGGCCATGGAAAAGCTGGAGAGTGTCCGAGACAAGTTCCAGGAGACCTCAGATGAGTTTGAAGCAGCACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS CAA 90 bp | ACAGGTGCTCCATGTATCAGGTCCCGCAGGGTCTTTACCCTCAGGTaGCTGGTCTTTTCACCAAGCACAAAGCTGATGGCATCCATGAGA | + |
|
Preference number: 6 (lower is better) Translates to: TGAPCIRSRRVFTLR*LVFSPSTKLMASMR Trigger: TCTCATGGATGCCATCAGCTTTGTGCTTGGTGAAAAGACCAGCAACCTGAGGGTAAAGACCCTGCGGGACCTGATACATGGAGCACCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS CAA 90 bp | GACAGTGGCAGTTTGATGTCCTGCATCTTACAGGCCTGTAGCAGGTaGTGGCGGTCACTGCGCTTCTGTTCAAGTTTGGTCTCAATGGCT | + |
|
Preference number: 6 (lower is better) Translates to: DSGSLMSCILQACSR*WRSLRFCSSLVSMA Trigger: AGCCATTGAGACCAAACTTGAACAGAAGCGCAGTGACCGCCACAACCTGCTACAGGCCTGTAAGATGCAGGACATCAAACTGCCACTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS CAA 90 bp | AGTTCCCCAGAGCGACTAATTTCTTCAAACAGAGCTGTCCTCTCCTaGGGGTTCTTCATGGCAATAGACTCCACTGCACCCTGGAAGACG | + |
|
Preference number: 6 (lower is better) Translates to: SSPERLISSNRAVLS*GFFMAIDSTAPWKT Trigger: CGTCTTCCAGGGTGCAGTGGAGTCTATTGCCATGAAGAACCCCAAGGAGAGGACAGCTCTGTTTGAAGAAATTAGTCGCTCTGGGGAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS GCA 72 bp | CGGTCGAAGCGCTCCTTCTTTATCTGTTCAAATGCCTaGTTGGCCTTCTTTGCTCGCTTTCGTGCTGCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: RSKRSFFICSNA*LAFFARFRAAS Trigger: TGAAGCAGCACGAAAGCGAGCAAAGAAGGCCAAGCAGGCATTTGAACAGATAAAGAAGGAGCGCTTCGACCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS GCA 72 bp | GAATCGGTCGAAGCGCTCCTTCTTTATCTGTTCAAATaGCTGCTTGGCCTTCTTTGCTCGCTTTCGTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ESVEALLLYLFK*LLGLLCSLSCC Trigger: GCAGCACGAAAGCGAGCAAAGAAGGCCAAGCAGGCATTTGAACAGATAAAGAAGGAGCGCTTCGACCGATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS CCA 72 bp | TTGATGTCCTGCATCTTACAGGCCTGTAGCAGGTTGTaGCGGTCACTGCGCTTCTGTTCAAGTTTGGTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: LMSCILQACSRL*RSLRFCSSLVS Trigger: TGAGACCAAACTTGAACAGAAGCGCAGTGACCGCCACAACCTGCTACAGGCCTGTAAGATGCAGGACATCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS CCA 72 bp | CGCTTTCGTGCTGCTTCAAACTCATCTGAGGTCTCCTaGAACTTGTCTCGGACACTCTCCAGCTTTTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: RFRAASNSSEVS*NLSRTLSSFSM Trigger: CATGGAAAAGCTGGAGAGTGTCCGAGACAAGTTCCAGGAGACCTCAGATGAGTTTGAAGCAGCACGAAAGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS CAA 72 bp | AGTTTGATGTCCTGCATCTTACAGGCCTGTAGCAGGTaGTGGCGGTCACTGCGCTTCTGTTCAAGTTTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: SLMSCILQACSR*WRSLRFCSSLV Trigger: GACCAAACTTGAACAGAAGCGCAGTGACCGCCACAACCTGCTACAGGCCTGTAAGATGCAGGACATCAAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS CAA 90 bp | TTCAGTTTGTCTACTGCTTTCTCATCCCAGCGCCGTGCTTTTGCCTaGAGATCACTGGCTCCACCAGAGATAACTCCTGACTTCTGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: FSLSTAFSSQRRAFA*RSLAPPEITPDFWN Trigger: GTTCCAGAAGTCAGGAGTTATCTCTGGTGGAGCCAGTGATCTCAAGGCAAAAGCACGGCGCTGGGATGAGAAAGCAGTAGACAAACTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS CAA 90 bp | CGAAGCGCTCCTTCTTTATCTGTTCAAATGCCTGCTTGGCCTTCTTaGCTCGCTTTCGTGCTGCTTCAAACTCATCTGAGGTCTCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: RSAPSLSVQMPAWPS*LAFVLLQTHLRSPG Trigger: TCCAGGAGACCTCAGATGAGTTTGAAGCAGCACGAAAGCGAGCAAAGAAGGCCAAGCAGGCATTTGAACAGATAAAGAAGGAGCGCTTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS TCA 72 bp | CCAGAGCCATTGGGTCCAATGATGGCGGTAAACCTCTaGAATGGTCCGATAATCTGTCGACCCTTGTACGAT | + |
|
Preference number: 6 (lower is better) Translates to: PEPLGPMMAVNL*NGPIICRPLYD Trigger: ATCGTACAAGGGTCGACAGATTATCGGACCATTTCAGAGGTTTACCGCCATCATTGGACCCAATGGCTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045312.6 ENSMUST00000145518.8 |
||
| CDS TCA 72 bp | GCCGGAAACGTTTGCCAGGAGCTACACAGTTGTAGTTaGTGCCATCCAAATAGGGCTCTTCAGGATTCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: AGNVCQELHSCS*CHPNRALQDSQ Trigger: CTGAGAATCCTGAAGAGCCCTATTTGGATGGCATCAACTACAACTGTGTAGCTCCTGGCAAACGTTTCCGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS GCA 72 bp | TTTCAGTTTGTCTACTGCTTTCTCATCCCAGCGCCGTaGTTTTGCCTTGAGATCACTGGCTCCACCAGAGAT | + |
|
Preference number: 6 (lower is better) Translates to: FQFVYCFLIPAP*FCLEITGSTRD Trigger: ATCTCTGGTGGAGCCAGTGATCTCAAGGCAAAAGCACGGCGCTGGGATGAGAAAGCAGTAGACAAACTGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS GCA 72 bp | AGACTGCACTTGACGCAGTTCTGCCTCTTTCCGTTTTaGCTTCATCTGCTCTTTCAGCTCCTCTGTCAAACG | + |
|
Preference number: 6 (lower is better) Translates to: RLHLTQFCLFPF*LHLLFQLLCQT Trigger: CGTTTGACAGAGGAGCTGAAAGAGCAGATGAAGGCAAAACGGAAAGAGGCAGAACTGCGTCAAGTGCAGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS CCA 72 bp | GCAGGTTGTGGCGGTCACTGCGCTTCTGTTCAAGTTTaGTCTCAATGGCTGTCACTTCCTTCTGTAAATGAG | + |
|
Preference number: 6 (lower is better) Translates to: AGCGGHCASVQV*SQWLSLPSVNE Trigger: CTCATTTACAGAAGGAAGTGACAGCCATTGAGACCAAACTTGAACAGAAGCGCAGTGACCGCCACAACCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS CAA 72 bp | GAGCGACTAATTTCTTCAAACAGAGCTGTCCTCTCCTaGGGGTTCTTCATGGCAATAGACTCCACTGCACCC | + |
|
Preference number: 6 (lower is better) Translates to: ERLISSNRAVLS*GFFMAIDSTAP Trigger: GGGTGCAGTGGAGTCTATTGCCATGAAGAACCCCAAGGAGAGGACAGCTCTGTTTGAAGAAATTAGTCGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS CAA 72 bp | CTAATATCATCCATGGTGCCCTTTGACAGTGGCAGTTaGATGTCCTGCATCTTACAGGCCTGTAGCAGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: LISSMVPFDSGS*MSCILQACSRL Trigger: CAACCTGCTACAGGCCTGTAAGATGCAGGACATCAAACTGCCACTGTCAAAGGGCACCATGGATGATATTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS CAA 72 bp | TATTGTTCATTGGGGTTGGGGTTGGCATCTGGGTACTaGGTGAGGTCGAAAGTCAGGACTTTGCTGATCACA | + |
|
Preference number: 6 (lower is better) Translates to: YCSLGLGLASGY*VRSKVRTLLIT Trigger: TGTGATCAGCAAAGTCCTGACTTTCGACCTCACCAAGTACCCAGATGCCAACCCCAACCCCAATGAACAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS CAA 90 bp | TTGAATCGGTCGAAGCGCTCCTTCTTTATCTGTTCAAATGCCTGCTaGGCCTTCTTTGCTCGCTTTCGTGCTGCTTCAAACTCATCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: LNRSKRSFFICSNAC*AFFARFRAASNSSE Trigger: CTCAGATGAGTTTGAAGCAGCACGAAAGCGAGCAAAGAAGGCCAAGCAGGCATTTGAACAGATAAAGAAGGAGCGCTTCGACCGATTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS CAA 90 bp | CGGCTCTGTATGATTCTCTTGATATCATTAATGCGAGGCCCGAAGTaGGCTAGTTCACTCTCCAGCTTAGACTTTTCCTGGAGATTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RLCMILLISLMRGPK*ASSLSSLDFSWRFR Trigger: CCTGAATCTCCAGGAAAAGTCTAAGCTGGAGAGTGAACTAGCCAACTTCGGGCCTCGCATTAATGATATCAAGAGAATCATACAGAGCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS TCA 72 bp | GCACCCCCAAGCTTCTTGCGAATCTCTTCCATCTCATaGTTCTTGTCGTTTACTTCTGACTTTTTGGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: APPSFLRISSIS*FLSFTSDFLAR Trigger: CCTGGCCAAAAAGTCAGAAGTAAACGACAAGAATCATGAGATGGAAGAGATTCGCAAGAAGCTTGGGGGTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS TCA 72 bp | TCAGATCTTCACACAGGTCACCGTAGTCAATCTCAATaGGGGCCTCTCGAGCATAGATACTGGATGTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SDLHTGHRSQSQ*GPLEHRYWMFS Trigger: AGAGAACATCCAGTATCTATGCTCGAGAGGCCCTCATTGAGATTGACTACGGTGACCTGTGTGAAGATCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS GCA 72 bp | TCCAGCTTAGACTTTTCCTGGAGATTCAGGGCAAGATaGCTTGTCTTAGTCTGTTCTAGGTCACTCTGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: SSLDFSWRFRAR*LVLVCSRSLCE Trigger: CTCACAGAGTGACCTAGAACAGACTAAGACAAGGCATCTTGCCCTGAATCTCCAGGAAAAGTCTAAGCTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS CCA 72 bp | GGCGGTCACTGCGCTTCTGTTCAAGTTTGGTCTCAATaGCTGTCACTTCCTTCTGTAAATGAGTCATTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GGHCASVQVWSQ*LSLPSVNESFP Trigger: AGGAAATGACTCATTTACAGAAGGAAGTGACAGCCATTGAGACCAAACTTGAACAGAAGCGCAGTGACCGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS CAA 90 bp | TCCTTCAAGTCTTTCATTTCCCTCTCTCGGCTCTGTATGATTCTCTaGATATCATTAATGCGAGGCCCGAAGTTGGCTAGTTCACTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SFKSFISLSRLCMIL*ISLMRGPKLASSLS Trigger: GGAGAGTGAACTAGCCAACTTCGGGCCTCGCATTAATGATATCAAGAGAATCATACAGAGCCGAGAGAGGGAAATGAAAGACTTGAAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS CCA 72 bp | GCCATTGGGTCCAATGATGGCGGTAAACCTCTGAAATaGTCCGATAATCTGTCGACCCTTGTACGATTTAAA | + |
|
Preference number: 6 (lower is better) Translates to: AIGSNDGGKPLK*SDNLSTLVRFK Trigger: TTTAAATCGTACAAGGGTCGACAGATTATCGGACCATTTCAGAGGTTTACCGCCATCATTGGACCCAATGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045312.6 ENSMUST00000145518.8 |
||
| CDS CAA 72 bp | CTGTATTCATGTAGCTGGACAACTTTGTTGTTGATCTaGTACTCAGAAGAGCCCCCTACAATGACTCGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LYSCSWTTLLLI*YSEEPPTMTRA Trigger: TGCCCGAGTCATTGTAGGGGGCTCTTCTGAGTACAAGATCAACAACAAAGTTGTCCAGCTACATGAATACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS CAA 90 bp | CCCAACTTCTCTAACTCTTCACTGTATTCATGTAGCTGGACAACTTaGTTGTTGATCTTGTACTCAGAAGAGCCCCCTACAATGACTCGG | + |
|
Preference number: 6 (lower is better) Translates to: PNFSNSSLYSCSWTT*LLILYSEEPPTMTR Trigger: CCGAGTCATTGTAGGGGGCTCTTCTGAGTACAAGATCAACAACAAAGTTGTCCAGCTACATGAATACAGTGAAGAGTTAGAGAAGTTGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS CAA 72 bp | ATGATTCTCTTGATATCATTAATGCGAGGCCCGAAGTaGGCTAGTTCACTCTCCAGCTTAGACTTTTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: MILLISLMRGPK*ASSLSSLDFSW Trigger: CCAGGAAAAGTCTAAGCTGGAGAGTGAACTAGCCAACTTCGGGCCTCGCATTAATGATATCAAGAGAATCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS CAA 72 bp | TCTTTCATTTCCCTCTCTCGGCTCTGTATGATTCTCTaGATATCATTAATGCGAGGCCCGAAGTTGGCTAGT | + |
|
Preference number: 6 (lower is better) Translates to: SFISLSRLCMIL*ISLMRGPKLAS Trigger: ACTAGCCAACTTCGGGCCTCGCATTAATGATATCAAGAGAATCATACAGAGCCGAGAGAGGGAAATGAAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS CAA 90 bp | TTCTCTAACTCTTCACTGTATTCATGTAGCTGGACAACTTTGTTGTaGATCTTGTACTCAGAAGAGCCCCCTACAATGACTCGGGCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: FSNSSLYSCSWTTLL*ILYSEEPPTMTRAK Trigger: CTTTGCCCGAGTCATTGTAGGGGGCTCTTCTGAGTACAAGATCAACAACAAAGTTGTCCAGCTACATGAATACAGTGAAGAGTTAGAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS CAA 90 bp | AACTTCTCTAACTCTTCACTGTATTCATGTAGCTGGACAACTTTGTaGTTGATCTTGTACTCAGAAGAGCCCCCTACAATGACTCGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: NFSNSSLYSCSWTTL*LILYSEEPPTMTRA Trigger: TGCCCGAGTCATTGTAGGGGGCTCTTCTGAGTACAAGATCAACAACAAAGTTGTCCAGCTACATGAATACAGTGAAGAGTTAGAGAAGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS TCA 72 bp | CTTGAGAGAGATAACAATGGCCTGGAAGTTGCAAGTTaGCTGTTCCTTGATGTAATTTGCCACCTTGCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: LERDNNGLEVAS*LFLDVICHLAN Trigger: ATTGGCAAGGTGGCAAATTACATCAAGGAACAGTCAACTTGCAACTTCCAGGCCATTGTTATCTCTCTCAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS CAA 72 bp | TCATCAATGTTGGTAGCCACAGATTCAAAGCAAGCATaGAATCGGTCGAAGCGCTCCTTCTTTATCTGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SSMLVATDSKQA*NRSKRSFFICS Trigger: TGAACAGATAAAGAAGGAGCGCTTCGACCGATTCAATGCTTGCTTTGAATCTGTGGCTACCAACATTGATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
||
| CDS GCA 72 bp | TTCTCAAATTCCAAGCGTTTCTTGGCAATTTCATTCTaGCGCTTCACCTTTTCTTCCTCAAATTCTCGGATG | + |
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Preference number: 6 (lower is better) Translates to: FSNSKRFLAISF*RFTFSSSNSRM Trigger: CATCCGAGAATTTGAGGAAGAAAAGGTGAAGCGGCAGAATGAAATTGCCAAGAAACGCTTGGAATTTGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
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| CDS CAA 72 bp | AACTCTTCACTGTATTCATGTAGCTGGACAACTTTGTaGTTGATCTTGTACTCAGAAGAGCCCCCTACAATG | + |
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Preference number: 6 (lower is better) Translates to: NSSLYSCSWTTL*LILYSEEPPTM Trigger: CATTGTAGGGGGCTCTTCTGAGTACAAGATCAACAACAAAGTTGTCCAGCTACATGAATACAGTGAAGAGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
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| CDS CAA 72 bp | TCTAACTCTTCACTGTATTCATGTAGCTGGACAACTTaGTTGTTGATCTTGTACTCAGAAGAGCCCCCTACA | + |
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Preference number: 6 (lower is better) Translates to: SNSSLYSCSWTT*LLILYSEEPPT Trigger: TGTAGGGGGCTCTTCTGAGTACAAGATCAACAACAAAGTTGTCCAGCTACATGAATACAGTGAAGAGTTAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
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| CDS CAA 90 bp | TACTTTATCCTGGTCCTCCTTCAACTGATTCTTTTCAAAATCCAATaGGATGCCCAAGCGAGTCTTCTGATTCTCAAATTCCAAGCGTTT | + |
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Preference number: 6 (lower is better) Translates to: YFILVLLQLILFKIQ*DAQASLLILKFQAF Trigger: AAACGCTTGGAATTTGAGAATCAGAAGACTCGCTTGGGCATCCAATTGGATTTTGAAAAGAATCAGTTGAAGGAGGACCAGGATAAAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
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| CDS CCA 72 bp | CCCAACTTCTCTAACTCTTCACTGTATTCATGTAGCTaGACAACTTTGTTGTTGATCTTGTACTCAGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: PNFSNSSLYSCS*TTLLLILYSEE Trigger: CTCTTCTGAGTACAAGATCAACAACAAAGTTGTCCAGCTACATGAATACAGTGAAGAGTTAGAGAAGTTGGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
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| CDS TCA 72 bp | TTTTCAAAATCCAATTGGATGCCCAAGCGAGTCTTCTaGTTCTCAAATTCCAAGCGTTTCTTGGCAATTTCA | + |
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Preference number: 6 (lower is better) Translates to: FSKSNWMPKRVF*FSNSKRFLAIS Trigger: TGAAATTGCCAAGAAACGCTTGGAATTTGAGAATCAGAAGACTCGCTTGGGCATCCAATTGGATTTTGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045312.6 |
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