Pregenerated sensors for SMARCD3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028949Ensembl transcript IDs: ENSMUST00000030791.12, ENSMUST00000195943.2
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGCCCAGGGCCTGTaGTGGGCGGAGTGGCTGGTCCACCCTGACGCTTGTTCACGGGCT | + |
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Preference number: 1 (lower is better) Translates to: TFRTAREGESRAQGL*WAEWLVHPDACSRA Trigger: AGCCCGTGAACAAGCGTCAGGGTGGACCAGCCACTCCGCCCAGCACAGGCCCTGGGCTCTGGACTCCCCCTCTCGCGCTGTGCGGAAGGT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| 3UTR-3UTR CCA 90 bp | ACCTTTAATCCATCCAGCCCTCCCCACCTTCCGCACAGCGCGAGAGGGGGAGTCGCCCAGGGCCTGTGCTaGGCGGAGTGGCTGGTCCAC | + |
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Preference number: 2 (lower is better) Translates to: TFNPSSPPHLPHSARGGVAQGLC*AEWLVH Trigger: GTGGACCAGCCACTCCGCCCAGCACAGGCCCTGGGC...GACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGGAGGGCTGGATGGATTAAAGGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| 3UTR-3UTR CCA 90 bp | GTCTGTTACGTGACCTTTAATCCATCCAGCCCTCCCCACCTTCCGCACAGCGCGCTGTGCTGGGCGGAGTaGCTGGTCCACCCTGACGCT | + |
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Preference number: 2 (lower is better) Translates to: VCYVTFNPSSPPHLPHSALCWAE*LVHPDA Trigger: AGCGTCAGGGTGGACCAGCCACTCCGCCCAGCACAG...CGCGCTGTGCGGAAGGTGGGGAGGGCTGGATGGATTAAAGGTCACGTAACAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| 3UTR GCA 72 bp | ACAGCGCGAGAGGGGGAGTCCAGAGCCCAGGGCCTGTaGTGGGCGGAGTGGCTGGTCCACCCTGACGCTTGT | + |
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Preference number: 3 (lower is better) Translates to: TAREGESRAQGL*WAEWLVHPDAC Trigger: ACAAGCGTCAGGGTGGACCAGCCACTCCGCCCAGCACAGGCCCTGGGCTCTGGACTCCCCCTCTCGCGCTGT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS-3UTR GCA 90 bp | CCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGCCCAGGGCCTGTGCTGGGCGGCGCACGACCAGCGACTaGTCCAGCTCCTGCCTGCGC | + |
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Preference number: 4 (lower is better) Translates to: PSAQRERGSPEPRACAGRRTTSD*SSSCLR Trigger: GCGCAGGCAGGAGCTGGAGCAGTCGCTGGTCGTGCG...CCGCCCAGCACAGGCCCTGGGCTCTGGACTCCCCCTCTCGCGCTGTGCGGAAGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS-3UTR CCA 90 bp | AGCCCTCCCCACCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGCCCAGGGCCTCCCATGGGCGCCCCCTaGTGGGGCATTCGGGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: SPPHLPHSARGGVQSPGPPMGAP*WGIRAP Trigger: TGGAGCCCGAATGCCCCACCAGGGGGCGCCCATGGG...AGGCCCTGGGCTCTGGACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGGAGGGCT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS-3UTR GCA 90 bp | CCCCACCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGCCCAGGGCCTGTGCTGCGCACGACCAGCGACTaGTCCAGCTCCTGCCTGCGC | + |
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Preference number: 4 (lower is better) Translates to: PHLPHSARGGVQSPGPVLRTTSD*SSSCLR Trigger: GCGCAGGCAGGAGCTGGAGCAGTCGCTGGTCGTGCG...CAGCACAGGCCCTGGGCTCTGGACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS-3UTR CCA 90 bp | CAGGGCCTGTGCTGGGCGGAGTGGCTGGTCCACCCTGACGCTTGTTCACGGGCTGGCACGGGCTGGCCCTaGCCCTGTGCCTGGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QGLCWAEWLVHPDACSRAGTGWP*PCAWLC Trigger: GCAGAGCCAGGCACAGGGCCAGGGCCAGCCCGTGCC...AGCCCGTGAACAAGCGTCAGGGTGGACCAGCCACTCCGCCCAGCACAGGCCCTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS-3UTR TCA 90 bp | ACCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGCCCAGGGCCTGTGCTGGGCGGCAGCAGCAGGGCTGTaGGGCGCTGGGGAATCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TFRTAREGESRAQGLCWAAAAGL*GAGESQ Trigger: CTGAGATTCCCCAGCGCCTCACAGCCCTGCTGCTGC...CGCCCAGCACAGGCCCTGGGCTCTGGACTCCCCCTCTCGCGCTGTGCGGAAGGT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS-3UTR CCA 90 bp | TCCATCCAGCCCTCCCCACCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGCCCATGGGCGCCCCCTGGTaGGGCATTCGGGCTCCAGAC | + |
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Preference number: 4 (lower is better) Translates to: SIQPSPPSAQRERGSPEPMGAPW*GIRAPD Trigger: GTCTGGAGCCCGAATGCCCCACCAGGGGGCGCCCAT...GGGCTCTGGACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGGAGGGCTGGATGGA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS-3UTR CCA 90 bp | AGGGCCTGTGCTGGGCGGAGTGGCTGGTCCACCCTGACGCTTGTTCACGGGCTCCCCATGGGCGCCCCCTaGTGGGGCATTCGGGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RACAGRSGWSTLTLVHGLPMGAP*WGIRAP Trigger: TGGAGCCCGAATGCCCCACCAGGGGGCGCCCATGGG...GAGCCCGTGAACAAGCGTCAGGGTGGACCAGCCACTCCGCCCAGCACAGGCCCT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS-3UTR CCA 90 bp | CCCCACCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGCCCAGGGCCTGTGCTGCTCTTCAGGGCCTCCTaGATGTCCACCCGCTTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: PHLPHSARGGVQSPGPVLLFRAS*MSTRFR Trigger: GCGGAAGCGGGTGGACATCCAGGAGGCCCTGAAGAG...CAGCACAGGCCCTGGGCTCTGGACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS-3UTR GCA 90 bp | CAGCCCTCCCCACCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGCCCAGGGCCTGCTTTTCGTGGCTTTaGGCGCCCCTCCGGCAACTT | + |
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Preference number: 4 (lower is better) Translates to: QPSPPSAQRERGSPEPRACFSWL*APLRQL Trigger: AAGTTGCCGGAGGGGCGCGCAAAGCCACGAAAAGCA...GGCCCTGGGCTCTGGACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGGAGGGCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000030791.12 |
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| CDS-3UTR GCA 90 bp | CCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGCCCAGGGCCTGTGCTGGGCGGAGAGCACTGATCTCCTaGTGGTTGGCCGTGGACAGG | + |
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Preference number: 4 (lower is better) Translates to: PSAQRERGSPEPRACAGRRALIS*WLAVDR Trigger: CCTGTCCACGGCCAACCAGCAGGAGATCAGTGCTCT...CCGCCCAGCACAGGCCCTGGGCTCTGGACTCCCCCTCTCGCGCTGTGCGGAAGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS-3UTR CCA 90 bp | CCATCCAGCCCTCCCCACCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGCCCACTCTTCAGGGCCTCCTaGATGTCCACCCGCTTCCGC | + |
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Preference number: 4 (lower is better) Translates to: PSSPPHLPHSARGGVQSPLFRAS*MSTRFR Trigger: GCGGAAGCGGGTGGACATCCAGGAGGCCCTGAAGAG...TGGGCTCTGGACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGGAGGGCTGGATGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS-3UTR TCA 90 bp | AGAGCCCAGGGCCTGTGCTGGGCGGAGTGGCTGGTCCACCCTGACGCTTGTTCAGCAGCAGCAGGGCTGTaGGGCGCTGGGGAATCTCAG | + |
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Preference number: 4 (lower is better) Translates to: RAQGLCWAEWLVHPDACSAAAGL*GAGESQ Trigger: CTGAGATTCCCCAGCGCCTCACAGCCCTGCTGCTGC...TGAACAAGCGTCAGGGTGGACCAGCCACTCCGCCCAGCACAGGCCCTGGGCTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS-3UTR TCA 90 bp | CCACCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGCCCAGGGCCTGTGCTGGGTACTGTCCAGAGCACTaGTCTCCTGCTGGTTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: PPSAQRERGSPEPRACAGYCPEH*SPAGWP Trigger: CGGCCAACCAGCAGGAGATCAGTGCTCTGGACAGTA...CCCAGCACAGGCCCTGGGCTCTGGACTCCCCCTCTCGCGCTGTGCGGAAGGTGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS-3UTR GCA 90 bp | CCCCACCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGCCCAGGGCCTGTGCTGGCTCCCAGGAGGCAATaGTGCCATCAGAGTCTTCCG | + |
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Preference number: 4 (lower is better) Translates to: PHLPHSARGGVQSPGPVLAPRRQ*CHQSLP Trigger: CGGAAGACTCTGATGGCAGCATTGCCTCCTGGGAGC...CAGCACAGGCCCTGGGCTCTGGACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS-3UTR GCA 90 bp | CTCCCCACCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGCCCAGGGCCTGTGCGCTCCAGCTCCTGCCTaGGCTGCTGGATCTTACAGT | + |
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Preference number: 4 (lower is better) Translates to: LPTFRTAREGESRAQGLCAPAPA*AAGSYS Trigger: ACTGTAAGATCCAGCAGCGCAGGCAGGAGCTGGAGC...GCACAGGCCCTGGGCTCTGGACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS-3UTR GCA 90 bp | CCCACCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGCCCAGGGCCTGTGCTGGGACTGCTCCAGCTCCTaGCTGCGCTGCTGGATCTTA | + |
|
Preference number: 4 (lower is better) Translates to: PTFRTAREGESRAQGLCWDCSSS*LRCWIL Trigger: TAAGATCCAGCAGCGCAGGCAGGAGCTGGAGCAGTC...CCAGCACAGGCCCTGGGCTCTGGACTCCCCCTCTCGCGCTGTGCGGAAGGTGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS-3UTR GCA 90 bp | CCTCCCCACCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGCCCAGGGCCTGTGGACTGCTCCAGCTCCTaGCTGCGCTGCTGGATCTTA | + |
|
Preference number: 4 (lower is better) Translates to: PPHLPHSARGGVQSPGPVDCSSS*LRCWIL Trigger: TAAGATCCAGCAGCGCAGGCAGGAGCTGGAGCAGTC...CACAGGCCCTGGGCTCTGGACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGGAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS-3UTR GCA 90 bp | CCATCCAGCCCTCCCCACCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGCCCAGGTAGAACTCAGCCCTaGGTTCTTCCTCGGGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: PSSPPHLPHSARGGVQSPGRTQP*VLPRGS Trigger: GGAACCCCGAGGAAGAACGCAGGGCTGAGTTCTACC...TGGGCTCTGGACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGGAGGGCTGGATGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS-3UTR GCA 90 bp | CCATCCAGCCCTCCCCACCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGCCCAGCTCCAGCTCCTGCCTaGGCTGCTGGATCTTACAGT | + |
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Preference number: 4 (lower is better) Translates to: PSSPPHLPHSARGGVQSPAPAPA*AAGSYS Trigger: ACTGTAAGATCCAGCAGCGCAGGCAGGAGCTGGAGC...TGGGCTCTGGACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGGAGGGCTGGATGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS-3UTR CCA 90 bp | TCCAGCCCTCCCCACCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGCCCAGGGCTGTTTCCTGGGTTGTaGGTGTCCGGTGCCACTCAA | + |
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Preference number: 4 (lower is better) Translates to: SSPPHLPHSARGGVQSPGLFPGL*VSGATQ Trigger: TTGAGTGGCACCGGACACCCACAACCCAGGAAACAG...CCCTGGGCTCTGGACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGGAGGGCTGGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS-3UTR CCA 90 bp | AGGGCCTGTGCTGGGCGGAGTGGCTGGTCCACCCTGACGCTTGTTCACGGGCTCGCACTGATCTCCTGCTaGTTGGCCGTGGACAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: RACAGRSGWSTLTLVHGLALISC*LAVDRR Trigger: CCTCCTGTCCACGGCCAACCAGCAGGAGATCAGTGC...GAGCCCGTGAACAAGCGTCAGGGTGGACCAGCCACTCCGCCCAGCACAGGCCCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS-3UTR TCA 90 bp | CCCACCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGCCCAGGGCCTGTGCTGGAGCTCCCGAATCCTTTaGGGGAGGATTTTGTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: PTFRTAREGESRAQGLCWSSRIL*GRILSA Trigger: GGCTGACAAAATCCTCCCTCAAAGGATTCGGGAGCT...CCAGCACAGGCCCTGGGCTCTGGACTCCCCCTCTCGCGCTGTGCGGAAGGTGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS-3UTR TCA 90 bp | CCATCCAGCCCTCCCCACCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGCCCACCACCCGCTTCCGCATaGTGGTTTGATCCAGTTTCC | + |
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Preference number: 4 (lower is better) Translates to: PSSPPHLPHSARGGVQSPPPASA*WFDPVS Trigger: GGAAACTGGATCAAACCATCATGCGGAAGCGGGTGG...TGGGCTCTGGACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGGAGGGCTGGATGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS-3UTR TCA 90 bp | AGCCCTCCCCACCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGCCCAGGGCCTTGTCTTCTTCTGGTCTaGTGGGTCCACGCTGATGAC | + |
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Preference number: 4 (lower is better) Translates to: SPPHLPHSARGGVQSPGPCLLLV*WVHADD Trigger: GTCATCAGCGTGGACCCATCAGACCAGAAGAAGACA...AGGCCCTGGGCTCTGGACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGGAGGGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS-3UTR TCA 90 bp | AGGGCCTGTGCTGGGCGGAGTGGCTGGTCCACCCTGACGCTTGTTCACGGGCTCTACTGTCCAGAGCACTaGTCTCCTGCTGGTTGGCCG | + |
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Preference number: 4 (lower is better) Translates to: RACAGRSGWSTLTLVHGLYCPEH*SPAGWP Trigger: CGGCCAACCAGCAGGAGATCAGTGCTCTGGACAGTA...GAGCCCGTGAACAAGCGTCAGGGTGGACCAGCCACTCCGCCCAGCACAGGCCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS-3UTR GCA 90 bp | CCCCACCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGCCCAGGGCCTGTGCTGTTCCTCGGGGTTCCCTaGCACATCTGTCATCACCTT | + |
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Preference number: 4 (lower is better) Translates to: PHLPHSARGGVQSPGPVLFLGVP*HICHHL Trigger: AAGGTGATGACAGATGTGGCAGGGAACCCCGAGGAA...CAGCACAGGCCCTGGGCTCTGGACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS-3UTR GCA 90 bp | CAGGGCCTGTGCTGGGCGGAGTGGCTGGTCCACCCTGACGCTTGTTCACGGGCTGGTAGAACTCAGCCCTaGGTTCTTCCTCGGGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: QGLCWAEWLVHPDACSRAGRTQP*VLPRGS Trigger: GGAACCCCGAGGAAGAACGCAGGGCTGAGTTCTACC...AGCCCGTGAACAAGCGTCAGGGTGGACCAGCCACTCCGCCCAGCACAGGCCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS-3UTR CCA 90 bp | TCCAGCCCTCCCCACCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGCCCAGGGTTCGCTTTTGCTTCATaGGCCTCTTCAGGGCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: SSPPHLPHSARGGVQSPGFAFAS*ASSGPP Trigger: AGGAGGCCCTGAAGAGGCCCATGAAGCAAAAGCGAA...CCCTGGGCTCTGGACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGGAGGGCTGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS-3UTR CCA 90 bp | AGCCCTCCCCACCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGCCCAGGGCCTTTCGCTTTTGCTTCATaGGCCTCTTCAGGGCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: SPPHLPHSARGGVQSPGPFAFAS*ASSGPP Trigger: AGGAGGCCCTGAAGAGGCCCATGAAGCAAAAGCGAA...AGGCCCTGGGCTCTGGACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGGAGGGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS-3UTR CCA 90 bp | GCCCAGGGCCTGTGCTGGGCGGAGTGGCTGGTCCACCCTGACGCTTGTTCACGGCTGTTTCCTGGGTTGTaGGTGTCCGGTGCCACTCAA | + |
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Preference number: 4 (lower is better) Translates to: AQGLCWAEWLVHPDACSRLFPGL*VSGATQ Trigger: TTGAGTGGCACCGGACACCCACAACCCAGGAAACAG...CCGTGAACAAGCGTCAGGGTGGACCAGCCACTCCGCCCAGCACAGGCCCTGGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS-3UTR CCA 90 bp | GCCCAGGGCCTGTGCTGGGCGGAGTGGCTGGTCCACCCTGACGCTTGTTCACGGACAGTGCCTGGACAATaGCTGAGCGGCTCTGTGTGT | + |
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Preference number: 4 (lower is better) Translates to: AQGLCWAEWLVHPDACSRTVPGQ*LSGSVC Trigger: ACACACAGAGCCGCTCAGCCATTGTCCAGGCACTGT...CCGTGAACAAGCGTCAGGGTGGACCAGCCACTCCGCCCAGCACAGGCCCTGGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS-3UTR CCA 90 bp | TCCATCCAGCCCTCCCCACCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGCCCCACGCTGTCTTCTTCTaGTCTGATGGGTCCACGCTG | + |
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Preference number: 4 (lower is better) Translates to: SIQPSPPSAQRERGSPEPHAVFF*SDGSTL Trigger: CAGCGTGGACCCATCAGACCAGAAGAAGACAGCGTG...GGGCTCTGGACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGGAGGGCTGGATGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS-3UTR CCA 90 bp | AGAGCCCAGGGCCTGTGCTGGGCGGAGTGGCTGGTCCACCCTGACGCTTGTTCAGCACTGATCTCCTGCTaGTTGGCCGTGGACAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: RAQGLCWAEWLVHPDACSALISC*LAVDRR Trigger: CCTCCTGTCCACGGCCAACCAGCAGGAGATCAGTGC...TGAACAAGCGTCAGGGTGGACCAGCCACTCCGCCCAGCACAGGCCCTGGGCTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS-3UTR CCA 90 bp | CAGGGCCTGTGCTGGGCGGAGTGGCTGGTCCACCCTGACGCTTGTTCACGGGCTTTGAGATCACGGCTCTaGGAGCGGAGCAGGTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: QGLCWAEWLVHPDACSRALRSRL*ERSRSW Trigger: CCAAGACCTGCTCCGCTCCCAGAGCCGTGATCTCAA...AGCCCGTGAACAAGCGTCAGGGTGGACCAGCCACTCCGCCCAGCACAGGCCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS-3UTR TCA 90 bp | GCCCAGGGCCTGTGCTGGGCGGAGTGGCTGGTCCACCCTGACGCTTGTTCACGGTGTCTTCTTCTGGTCTaGTGGGTCCACGCTGATGAC | + |
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Preference number: 4 (lower is better) Translates to: AQGLCWAEWLVHPDACSRCLLLV*WVHADD Trigger: GTCATCAGCGTGGACCCATCAGACCAGAAGAAGACA...CCGTGAACAAGCGTCAGGGTGGACCAGCCACTCCGCCCAGCACAGGCCCTGGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS-3UTR TCA 90 bp | CAGCCCTCCCCACCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGCCCAGGGCCAGTCCCTCTGGATCTTaGGCTGGTTTATGGACTCAA | + |
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Preference number: 4 (lower is better) Translates to: QPSPPSAQRERGSPEPRASPSGS*AGLWTQ Trigger: TTGAGTCCATAAACCAGCTCAAGATCCAGAGGGACT...GGCCCTGGGCTCTGGACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGGAGGGCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS-3UTR GCA 90 bp | CCATCCAGCCCTCCCCACCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGCCCATTCCTCGGGGTTCCCTaGCACATCTGTCATCACCTT | + |
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Preference number: 4 (lower is better) Translates to: PSSPPHLPHSARGGVQSPFLGVP*HICHHL Trigger: AAGGTGATGACAGATGTGGCAGGGAACCCCGAGGAA...TGGGCTCTGGACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGGAGGGCTGGATGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS-3UTR CCA 90 bp | CAGGGCCTGTGCTGGGCGGAGTGGCTGGTCCACCCTGACGCTTGTTCACGGGCTACAGTGCCTGGACAATaGCTGAGCGGCTCTGTGTGT | + |
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Preference number: 4 (lower is better) Translates to: QGLCWAEWLVHPDACSRATVPGQ*LSGSVC Trigger: ACACACAGAGCCGCTCAGCCATTGTCCAGGCACTGT...AGCCCGTGAACAAGCGTCAGGGTGGACCAGCCACTCCGCCCAGCACAGGCCCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS-3UTR CCA 90 bp | CCAGCCCTCCCCACCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGCCCAGGGCATGTACTCCTTGTCATaGGAGTCCTGTAGCCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: PALPTFRTAREGESRAQGMYSLS*ESCSLL Trigger: CAACAGGCTACAGGACTCCCATGACAAGGAGTACAT...GCCCTGGGCTCTGGACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGGAGGGCTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS-3UTR CCA 90 bp | CCACCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGCCCAGGGCCTGTGCTGGGTCCACGCTGATGACGTaGTTGATCACAATGGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: PPSAQRERGSPEPRACAGSTLMT*LITMGS Trigger: TGACCCCATTGTGATCAACCACGTCATCAGCGTGGA...CCCAGCACAGGCCCTGGGCTCTGGACTCCCCCTCTCGCGCTGTGCGGAAGGTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS-3UTR TCA 90 bp | CAGGGCCTGTGCTGGGCGGAGTGGCTGGTCCACCCTGACGCTTGTTCACGGGCTAGCTCCCGAATCCTTTaGGGGAGGATTTTGTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QGLCWAEWLVHPDACSRASSRIL*GRILSA Trigger: GGCTGACAAAATCCTCCCTCAAAGGATTCGGGAGCT...AGCCCGTGAACAAGCGTCAGGGTGGACCAGCCACTCCGCCCAGCACAGGCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
||
| CDS-3UTR GCA 90 bp | TTAATCCATCCAGCCCTCCCCACCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGCATCAGGAGCAGGGTaGAGCGCACACTCAAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LIHPALPTFRTAREGESRASGAG*SAHSSP Trigger: GGGACTTGAGTGTGCGCTGCACCCTGCTCCTGATGC...TCTGGACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGGAGGGCTGGATGGATTAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGCCCTCCCCACCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGCCCAGGGAGTCCTGTAGCCTGTTaGTCTTCACATACTGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: SSPPHLPHSARGGVQSPGSPVAC*SSHTAT Trigger: TGTGGCAGTATGTGAAGACCAACAGGCTACAGGACT...CCCTGGGCTCTGGACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGGAGGGCTGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
||
| CDS-3UTR CCA 90 bp | CCTTTAATCCATCCAGCCCTCCCCACCTTCCGCACAGCGCGAGAGGGGGAGTCCTTGAGATCACGGCTCTaGGAGCGGAGCAGGTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PLIHPALPTFRTAREGESLRSRL*ERSRSW Trigger: CCAAGACCTGCTCCGCTCCCAGAGCCGTGATCTCAA...GGACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGGAGGGCTGGATGGATTAAAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
||
| CDS-3UTR TCA 90 bp | TCCATCCAGCCCTCCCCACCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGCCCAGTCCCTCTGGATCTTaGGCTGGTTTATGGACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SIQPSPPSAQRERGSPEPSPSGS*AGLWTQ Trigger: TTGAGTCCATAAACCAGCTCAAGATCCAGAGGGACT...GGGCTCTGGACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGGAGGGCTGGATGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
||
| CDS-3UTR GCA 90 bp | ACCTTTAATCCATCCAGCCCTCCCCACCTTCCGCACAGCGCGAGAGGGGGAGTCGCTCCCAGGAGGCAATaGTGCCATCAGAGTCTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: TFNPSSPPHLPHSARGGVAPRRQ*CHQSLP Trigger: CGGAAGACTCTGATGGCAGCATTGCCTCCTGGGAGC...GACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGGAGGGCTGGATGGATTAAAGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
||
| CDS-3UTR GCA 90 bp | CTCCCCACCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGCCCAGGGCCTGTGCGGGCAGTCAAAAATCTaGTGGAAATACTTGTCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPTFRTAREGESRAQGLCGQSKI*WKYLSP Trigger: TGGCGACAAGTATTTCCAGCAGATTTTTGACTGCCC...GCACAGGCCCTGGGCTCTGGACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
||
| CDS-3UTR GCA 90 bp | TTTAATCCATCCAGCCCTCCCCACCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGAGCACTGATCTCCTaGTGGTTGGCCGTGGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: FNPSSPPHLPHSARGGVQRALIS*WLAVDR Trigger: CCTGTCCACGGCCAACCAGCAGGAGATCAGTGCTCT...CTGGACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGGAGGGCTGGATGGATTAAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
||
| CDS-3UTR CCA 90 bp | CCCACCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGCCCAGGGCCTGTGCTGGGACTCAATCGTCTCATaGATCTTACTGTCCAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PTFRTAREGESRAQGLCWDSIVS*ILLSRA Trigger: TGCTCTGGACAGTAAGATCCATGAGACGATTGAGTC...CCAGCACAGGCCCTGGGCTCTGGACTCCCCCTCTCGCGCTGTGCGGAAGGTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
||
| CDS-3UTR CCA 90 bp | CCCCACCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGCCCAGGGCCTGTGCTGAGCATGAAGTCCCTCTaGATCTTGAGCTGGTTTATG | + |
|
Preference number: 4 (lower is better) Translates to: PHLPHSARGGVQSPGPVLSMKSL*ILSWFM Trigger: CATAAACCAGCTCAAGATCCAGAGGGACTTCATGCT...CAGCACAGGCCCTGGGCTCTGGACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGCCCTCCCCACCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGCCCAGGGAGCATGAAGTCCCTCTaGATCTTGAGCTGGTTTATG | + |
|
Preference number: 4 (lower is better) Translates to: SSPPHLPHSARGGVQSPGSMKSL*ILSWFM Trigger: CATAAACCAGCTCAAGATCCAGAGGGACTTCATGCT...CCCTGGGCTCTGGACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGGAGGGCTGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
||
| CDS-3UTR TCA 90 bp | CCCAGGGCCTGTGCTGGGCGGAGTGGCTGGTCCACCCTGACGCTTGTTCACGGGAATACTTGTCGCCATTaGTGTACTCCTTGTCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: PRACAGRSGWSTLTLVHGNTCRH*CTPCHG Trigger: CCCATGACAAGGAGTACATCAATGGCGACAAGTATT...CCCGTGAACAAGCGTCAGGGTGGACCAGCCACTCCGCCCAGCACAGGCCCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
||
| CDS-3UTR GCA 90 bp | ACCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGCCCAGGGCCTGTGCTGGGCGGAAACTCAAAAAGTTTaGTTTTCGTGGCTTTGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: TFRTAREGESRAQGLCWAETQKV*FSWLCA Trigger: CGCGCAAAGCCACGAAAAGCAAACTTTTTGAGTTTC...CGCCCAGCACAGGCCCTGGGCTCTGGACTCCCCCTCTCGCGCTGTGCGGAAGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000030791.12 |
||
| CDS-3UTR CCA 90 bp | CAGCCCTCCCCACCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGCCCAGGGCCCAGTCAAAAATCTGCTaGAAATACTTGTCGCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: QPSPPSAQRERGSPEPRAQSKIC*KYLSPL Trigger: CAATGGCGACAAGTATTTCCAGCAGATTTTTGACTG...GGCCCTGGGCTCTGGACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGGAGGGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
||
| CDS-3UTR CCA 90 bp | AGAGCCCAGGGCCTGTGCTGGGCGGAGTGGCTGGTCCACCCTGACGCTTGTTCATCCACGCTGATGACGTaGTTGATCACAATGGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RAQGLCWAEWLVHPDACSSTLMT*LITMGS Trigger: TGACCCCATTGTGATCAACCACGTCATCAGCGTGGA...TGAACAAGCGTCAGGGTGGACCAGCCACTCCGCCCAGCACAGGCCCTGGGCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
||
| CDS-3UTR CCA 90 bp | TTTAATCCATCCAGCCCTCCCCACCTTCCGCACAGCGCGAGAGGGGGAGTCCAGCACGCTGTCTTCTTCTaGTCTGATGGGTCCACGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FNPSSPPHLPHSARGGVQHAVFF*SDGSTL Trigger: CAGCGTGGACCCATCAGACCAGAAGAAGACAGCGTG...CTGGACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGGAGGGCTGGATGGATTAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
||
| CDS-3UTR TCA 90 bp | GTCTGTTACGTGACCTTTAATCCATCCAGCCCTCCCCACCTTCCGCACAGCGCGCCACCCGCTTCCGCATaGTGGTTTGATCCAGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VCYVTFNPSSPPHLPHSAPPASA*WFDPVS Trigger: GGAAACTGGATCAAACCATCATGCGGAAGCGGGTGG...CGCGCTGTGCGGAAGGTGGGGAGGGCTGGATGGATTAAAGGTCACGTAACAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
||
| CDS-3UTR CCA 90 bp | GTCTGTTACGTGACCTTTAATCCATCCAGCCCTCCCCACCTTCCGCACAGCGCGAAAGTTTGCTTTTCGTaGCTTTGCGCGCCCCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: VCYVTFNPSSPPHLPHSAKVCFS*LCAPLR Trigger: CCGGAGGGGCGCGCAAAGCCACGAAAAGCAAACTTT...CGCGCTGTGCGGAAGGTGGGGAGGGCTGGATGGATTAAAGGTCACGTAACAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030791.12 |
||
| CDS-3UTR CCA 90 bp | TGTTACGTGACCTTTAATCCATCCAGCCCTCCCCACCTTCCGCACAGCGCGAGACCTGCTGGTTGGCCGTaGACAGGAGGAAGCTACTCA | + |
|
Preference number: 4 (lower is better) Translates to: CYVTFNPSSPPHLPHSARPAGWP*TGGSYS Trigger: TGAGTAGCTTCCTCCTGTCCACGGCCAACCAGCAGG...TCTCGCGCTGTGCGGAAGGTGGGGAGGGCTGGATGGATTAAAGGTCACGTAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
||
| CDS-3UTR CCA 90 bp | CCTTTAATCCATCCAGCCCTCCCCACCTTCCGCACAGCGCGAGAGGGGGAGTCCCTTGGACGTAGCCTTTaGGGTCTCTGGAGAAACTTA | + |
|
Preference number: 4 (lower is better) Translates to: PLIHPALPTFRTAREGESLGRSL*GLWRNL Trigger: TAAGTTTCTCCAGAGACCCCAAAGGCTACGTCCAAG...GGACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGGAGGGCTGGATGGATTAAAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
||
| CDS-3UTR CCA 90 bp | TTTAATCCATCCAGCCCTCCCCACCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGTCCTGTAGCCTGTTaGTCTTCACATACTGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: FNPSSPPHLPHSARGGVQSPVAC*SSHTAT Trigger: TGTGGCAGTATGTGAAGACCAACAGGCTACAGGACT...CTGGACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGGAGGGCTGGATGGATTAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
||
| CDS-3UTR CCA 90 bp | ACCTTTAATCCATCCAGCCCTCCCCACCTTCCGCACAGCGCGAGAGGGGGAGTCCTTGGACGTAGCCTTTaGGGTCTCTGGAGAAACTTA | + |
|
Preference number: 4 (lower is better) Translates to: TFNPSSPPHLPHSARGGVLGRSL*GLWRNL Trigger: TAAGTTTCTCCAGAGACCCCAAAGGCTACGTCCAAG...GACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGGAGGGCTGGATGGATTAAAGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
||
| CDS-3UTR GCA 90 bp | ACCTTTAATCCATCCAGCCCTCCCCACCTTCCGCACAGCGCGAGAGGGGGAGTCGGGCAGTCAAAAATCTaGTGGAAATACTTGTCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TFNPSSPPHLPHSARGGVGQSKI*WKYLSP Trigger: TGGCGACAAGTATTTCCAGCAGATTTTTGACTGCCC...GACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGGAGGGCTGGATGGATTAAAGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
||
| CDS-3UTR CCA 90 bp | ACCTTTAATCCATCCAGCCCTCCCCACCTTCCGCACAGCGCGAGAGGGGGAGTCGACTCAATCGTCTCATaGATCTTACTGTCCAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TFNPSSPPHLPHSARGGVDSIVS*ILLSRA Trigger: TGCTCTGGACAGTAAGATCCATGAGACGATTGAGTC...GACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGGAGGGCTGGATGGATTAAAGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
||
| CDS-3UTR CCA 90 bp | CCTTTAATCCATCCAGCCCTCCCCACCTTCCGCACAGCGCGAGAGGGGGAGTCCCAGTCAAAAATCTGCTaGAAATACTTGTCGCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: PLIHPALPTFRTAREGESQSKIC*KYLSPL Trigger: CAATGGCGACAAGTATTTCCAGCAGATTTTTGACTG...GGACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGGAGGGCTGGATGGATTAAAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
||
| CDS-3UTR CAA 90 bp | CCTCCCCACCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGCCCAGGGCCTGTGGGAGCGGAGCAGGTCTaGGACGTAGCCTTTGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: PPHLPHSARGGVQSPGPVGAEQV*DVAFGV Trigger: GACCCCAAAGGCTACGTCCAAGACCTGCTCCGCTCC...CACAGGCCCTGGGCTCTGGACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGGAGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
||
| CDS-3UTR CAA 90 bp | CCCAGGGCCTGTGCTGGGCGGAGTGGCTGGTCCACCCTGACGCTTGTTCACGGGGGAGCGGAGCAGGTCTaGGACGTAGCCTTTGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: PRACAGRSGWSTLTLVHGGAEQV*DVAFGV Trigger: GACCCCAAAGGCTACGTCCAAGACCTGCTCCGCTCC...CCCGTGAACAAGCGTCAGGGTGGACCAGCCACTCCGCCCAGCACAGGCCCTGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
||
| CDS-3UTR CAA 90 bp | CTCCCCACCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGCCCAGGGCCTGTGCGCGCAGCTTTCGCTTTaGCTTCATGGGCCTCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LPTFRTAREGESRAQGLCAQLSL*LHGPLQ Trigger: CTGAAGAGGCCCATGAAGCAAAAGCGAAAGCTGCGC...GCACAGGCCCTGGGCTCTGGACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGGAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
||
| CDS-3UTR CAA 90 bp | AGAGCCCAGGGCCTGTGCTGGGCGGAGTGGCTGGTCCACCCTGACGCTTGTTCATTGCTTTTCGTGGCTTaGCGCGCCCCTCCGGCAACT | + |
|
Preference number: 5 (lower is better) Translates to: RAQGLCWAEWLVHPDACSLLFVA*RAPPAT Trigger: AGTTGCCGGAGGGGCGCGCAAAGCCACGAAAAGCAA...TGAACAAGCGTCAGGGTGGACCAGCCACTCCGCCCAGCACAGGCCCTGGGCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030791.12 |
||
| CDS-3UTR CAA 90 bp | CCATCCAGCCCTCCCCACCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGCCCAGCGCAGCTTTCGCTTTaGCTTCATGGGCCTCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PSSPPHLPHSARGGVQSPAQLSL*LHGPLQ Trigger: CTGAAGAGGCCCATGAAGCAAAAGCGAAAGCTGCGC...TGGGCTCTGGACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGGAGGGCTGGATGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
||
| CDS-3UTR CAA 90 bp | CTCCCCACCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGCCCAGGGCCTGTGCACATCTGTCATCACCTaGAGATCACGGCTCTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LPTFRTAREGESRAQGLCTSVIT*RSRLWE Trigger: CTCCCAGAGCCGTGATCTCAAGGTGATGACAGATGT...GCACAGGCCCTGGGCTCTGGACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
||
| CDS-3UTR CAA 90 bp | AGCCCTCCCCACCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGCCCAGGGCCTACATCTGTCATCACCTaGAGATCACGGCTCTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SPPHLPHSARGGVQSPGPTSVIT*RSRLWE Trigger: CTCCCAGAGCCGTGATCTCAAGGTGATGACAGATGT...AGGCCCTGGGCTCTGGACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGGAGGGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
||
| CDS-3UTR CAA 90 bp | CCATCCAGCCCTCCCCACCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGCCCAGAGTCCTGTAGCCTGTaGGTCTTCACATACTGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: PSSPPHLPHSARGGVQSPESCSL*VFTYCH Trigger: GTGGCAGTATGTGAAGACCAACAGGCTACAGGACTC...TGGGCTCTGGACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGGAGGGCTGGATGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
||
| CDS-3UTR CAA 90 bp | CCCAGGGCCTGTGCTGGGCGGAGTGGCTGGTCCACCCTGACGCTTGTTCACGGGGAGTCCTGTAGCCTGTaGGTCTTCACATACTGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: PRACAGRSGWSTLTLVHGESCSL*VFTYCH Trigger: GTGGCAGTATGTGAAGACCAACAGGCTACAGGACTC...CCCGTGAACAAGCGTCAGGGTGGACCAGCCACTCCGCCCAGCACAGGCCCTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
||
| CDS-3UTR CAA 90 bp | CCACCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGCCCAGGGCCTGTGCTGGGCCATTGATGTACTCCTaGTCATGGGAGTCCTGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: PPSAQRERGSPEPRACAGPLMYS*SWESCS Trigger: GCTACAGGACTCCCATGACAAGGAGTACATCAATGG...CCCAGCACAGGCCCTGGGCTCTGGACTCCCCCTCTCGCGCTGTGCGGAAGGTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
||
| CDS-3UTR CAA 90 bp | CCCCACCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGCCCAGGGCCTGTGCTGCCATTGATGTACTCCTaGTCATGGGAGTCCTGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: PHLPHSARGGVQSPGPVLPLMYS*SWESCS Trigger: GCTACAGGACTCCCATGACAAGGAGTACATCAATGG...CAGCACAGGCCCTGGGCTCTGGACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
||
| CDS-3UTR CAA 90 bp | TCCAGCCCTCCCCACCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGCCCAGGGAAGTCCCTCTGGATCTaGAGCTGGTTTATGGACTCA | + |
|
Preference number: 5 (lower is better) Translates to: SSPPHLPHSARGGVQSPGKSLWI*SWFMDS Trigger: TGAGTCCATAAACCAGCTCAAGATCCAGAGGGACTT...CCCTGGGCTCTGGACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGGAGGGCTGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
||
| CDS-3UTR CAA 90 bp | CTCCCCACCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGCCCAGGGCCTGTGCATCTGCTGGAAATACTaGTCGCCATTGATGTACTCC | + |
|
Preference number: 5 (lower is better) Translates to: LPTFRTAREGESRAQGLCICWKY*SPLMYS Trigger: GGAGTACATCAATGGCGACAAGTATTTCCAGCAGAT...GCACAGGCCCTGGGCTCTGGACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
||
| CDS-3UTR CAA 90 bp | ACCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGCCCAGGGCCTGTGCTGGGCGATCTGCTGGAAATACTaGTCGCCATTGATGTACTCC | + |
|
Preference number: 5 (lower is better) Translates to: TFRTAREGESRAQGLCWAICWKY*SPLMYS Trigger: GGAGTACATCAATGGCGACAAGTATTTCCAGCAGAT...CGCCCAGCACAGGCCCTGGGCTCTGGACTCCCCCTCTCGCGCTGTGCGGAAGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
||
| CDS-3UTR CAA 90 bp | CCTTTAATCCATCCAGCCCTCCCCACCTTCCGCACAGCGCGAGAGGGGGAGTCCACGCTGATGACGTGGTaGATCACAATGGGGTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PLIHPALPTFRTAREGESTLMTW*ITMGSG Trigger: CCCTGACCCCATTGTGATCAACCACGTCATCAGCGT...GGACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGGAGGGCTGGATGGATTAAAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
||
| CDS-3UTR CAA 90 bp | GCCCAGGGCCTGTGCTGGGCGGAGTGGCTGGTCCACCCTGACGCTTGTTCACGGAAGTCCCTCTGGATCTaGAGCTGGTTTATGGACTCA | + |
|
Preference number: 5 (lower is better) Translates to: AQGLCWAEWLVHPDACSRKSLWI*SWFMDS Trigger: TGAGTCCATAAACCAGCTCAAGATCCAGAGGGACTT...CCGTGAACAAGCGTCAGGGTGGACCAGCCACTCCGCCCAGCACAGGCCCTGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
||
| CDS-3UTR CAA 90 bp | CTCCCCACCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGCCCAGGGCCTGTGCAAATACTTGTCGCCATaGATGTACTCCTTGTCATGG | + |
|
Preference number: 5 (lower is better) Translates to: LPTFRTAREGESRAQGLCKYLSP*MYSLSW Trigger: CCATGACAAGGAGTACATCAATGGCGACAAGTATTT...GCACAGGCCCTGGGCTCTGGACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
||
| CDS-3UTR CAA 90 bp | CCCCACCTTCCGCACAGCGCGAGAGGGGGAGTCCAGAGCCCAGGGCCTGTGCTGAAATACTTGTCGCCATaGATGTACTCCTTGTCATGG | + |
|
Preference number: 5 (lower is better) Translates to: PHLPHSARGGVQSPGPVLKYLSP*MYSLSW Trigger: CCATGACAAGGAGTACATCAATGGCGACAAGTATTT...CAGCACAGGCCCTGGGCTCTGGACTCCCCCTCTCGCGCTGTGCGGAAGGTGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
||
| CDS-3UTR CAA 90 bp | GTCTGTTACGTGACCTTTAATCCATCCAGCCCTCCCCACCTTCCGCACAGCGCGACGCTGATGACGTGGTaGATCACAATGGGGTCAGGG | + |
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Preference number: 5 (lower is better) Translates to: VCYVTFNPSSPPHLPHSATLMTW*ITMGSG Trigger: CCCTGACCCCATTGTGATCAACCACGTCATCAGCGT...CGCGCTGTGCGGAAGGTGGGGAGGGCTGGATGGATTAAAGGTCACGTAACAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS-3UTR CAA 90 bp | GTCTGTTACGTGACCTTTAATCCATCCAGCCCTCCCCACCTTCCGCACAGCGCGCAGCTCCCGAATCCTTaGAGGGAGGATTTTGTCAGC | + |
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Preference number: 5 (lower is better) Translates to: VCYVTFNPSSPPHLPHSAQLPNP*REDFVS Trigger: GCTGACAAAATCCTCCCTCAAAGGATTCGGGAGCTG...CGCGCTGTGCGGAAGGTGGGGAGGGCTGGATGGATTAAAGGTCACGTAACAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS-3UTR CAA 90 bp | TGTTACGTGACCTTTAATCCATCCAGCCCTCCCCACCTTCCGCACAGCGCGAGACAGCTCCCGAATCCTTaGAGGGAGGATTTTGTCAGC | + |
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Preference number: 5 (lower is better) Translates to: CYVTFNPSSPPHLPHSARQLPNP*REDFVS Trigger: GCTGACAAAATCCTCCCTCAAAGGATTCGGGAGCTG...TCTCGCGCTGTGCGGAAGGTGGGGAGGGCTGGATGGATTAAAGGTCACGTAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS GCA 90 bp | GACTCAATCGTCTCATGGATCTTACTGTCCAGAGCACTGATCTCCTaGTGGTTGGCCGTGGACAGGAGGAAGCTACTCATCTGCCCTTTC | + |
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Preference number: 5 (lower is better) Translates to: DSIVSWILLSRALIS*WLAVDRRKLLICPF Trigger: GAAAGGGCAGATGAGTAGCTTCCTCCTGTCCACGGCCAACCAGCAGGAGATCAGTGCTCTGGACAGTAAGATCCATGAGACGATTGAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS CCA 90 bp | TCAATCGTCTCATGGATCTTACTGTCCAGAGCACTGATCTCCTGCTaGTTGGCCGTGGACAGGAGGAAGCTACTCATCTGCCCTTTCAGC | + |
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Preference number: 5 (lower is better) Translates to: SIVSWILLSRALISC*LAVDRRKLLICPFS Trigger: GCTGAAAGGGCAGATGAGTAGCTTCCTCCTGTCCACGGCCAACCAGCAGGAGATCAGTGCTCTGGACAGTAAGATCCATGAGACGATTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS TCA 90 bp | TTAGGCGGGGGCAGTCAAAAATCTGCTGGAAATACTTGTCGCCATTaGTGTACTCCTTGTCATGGGAGTCCTGTAGCCTGTTGGTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: LGGGSQKSAGNTCRH*CTPCHGSPVACWSS Trigger: TGAAGACCAACAGGCTACAGGACTCCCATGACAAGGAGTACATCAATGGCGACAAGTATTTCCAGCAGATTTTTGACTGCCCCCGCCTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS CAA 72 bp | GGTGCAGCGCACACTCAAGTCCCCTGGTCTCTTCACTaGGAACCCATCTGTTTCCTGGGTTGTGGGTGTCCG | + |
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Preference number: 6 (lower is better) Translates to: GAAHTQVPWSLH*EPICFLGCGCP Trigger: CGGACACCCACAACCCAGGAAACAGATGGGTTCCAAGTGAAGAGACCAGGGGACTTGAGTGTGCGCTGCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS CCA 72 bp | CATCAGGAGCAGGGTGCAGCGCACACTCAAGTCCCCTaGTCTCTTCACTTGGAACCCATCTGTTTCCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: HQEQGAAHTQVP*SLHLEPICFLG Trigger: ACCCAGGAAACAGATGGGTTCCAAGTGAAGAGACCAGGGGACTTGAGTGTGCGCTGCACCCTGCTCCTGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS CAA 72 bp | TGGATCTTACTGTCCAGAGCACTGATCTCCTGCTGGTaGGCCGTGGACAGGAGGAAGCTACTCATCTGCCCT | + |
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Preference number: 6 (lower is better) Translates to: WILLSRALISCW*AVDRRKLLICP Trigger: AGGGCAGATGAGTAGCTTCCTCCTGTCCACGGCCAACCAGCAGGAGATCAGTGCTCTGGACAGTAAGATCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS CAA 90 bp | ATCGTCTCATGGATCTTACTGTCCAGAGCACTGATCTCCTGCTGGTaGGCCGTGGACAGGAGGAAGCTACTCATCTGCCCTTTCAGCGGT | + |
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Preference number: 6 (lower is better) Translates to: IVSWILLSRALISCW*AVDRRKLLICPFSG Trigger: ACCGCTGAAAGGGCAGATGAGTAGCTTCCTCCTGTCCACGGCCAACCAGCAGGAGATCAGTGCTCTGGACAGTAAGATCCATGAGACGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS TCA 72 bp | ACTCAATCGTCTCATGGATCTTACTGTCCAGAGCACTaGTCTCCTGCTGGTTGGCCGTGGACAGGAGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: TQSSHGSYCPEH*SPAGWPWTGGS Trigger: GCTTCCTCCTGTCCACGGCCAACCAGCAGGAGATCAGTGCTCTGGACAGTAAGATCCATGAGACGATTGAGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS GCA 72 bp | GTCTCATGGATCTTACTGTCCAGAGCACTGATCTCCTaGTGGTTGGCCGTGGACAGGAGGAAGCTACTCATC | + |
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Preference number: 6 (lower is better) Translates to: VSWILLSRALIS*WLAVDRRKLLI Trigger: GATGAGTAGCTTCCTCCTGTCCACGGCCAACCAGCAGGAGATCAGTGCTCTGGACAGTAAGATCCATGAGAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS CCA 72 bp | GTCTCTTCACTTGGAACCCATCTGTTTCCTGGGTTGTaGGTGTCCGGTGCCACTCAACAAGGTGGTTGTCTG | + |
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Preference number: 6 (lower is better) Translates to: VSSLGTHLFPGL*VSGATQQGGCL Trigger: CAGACAACCACCTTGTTGAGTGGCACCGGACACCCACAACCCAGGAAACAGATGGGTTCCAAGTGAAGAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS CCA 72 bp | TCATGGATCTTACTGTCCAGAGCACTGATCTCCTGCTaGTTGGCCGTGGACAGGAGGAAGCTACTCATCTGC | + |
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Preference number: 6 (lower is better) Translates to: SWILLSRALISC*LAVDRRKLLIC Trigger: GCAGATGAGTAGCTTCCTCCTGTCCACGGCCAACCAGCAGGAGATCAGTGCTCTGGACAGTAAGATCCATGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS CAA 90 bp | TTTAGGCGGGGGCAGTCAAAAATCTGCTGGAAATACTTGTCGCCATaGATGTACTCCTTGTCATGGGAGTCCTGTAGCCTGTTGGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: FRRGQSKICWKYLSP*MYSLSWESCSLLVF Trigger: GAAGACCAACAGGCTACAGGACTCCCATGACAAGGAGTACATCAATGGCGACAAGTATTTCCAGCAGATTTTTGACTGCCCCCGCCTAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS CAA 72 bp | GGGCAGTCAAAAATCTGCTGGAAATACTTGTCGCCATaGATGTACTCCTTGTCATGGGAGTCCTGTAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: GQSKICWKYLSP*MYSLSWESCSL Trigger: CAGGCTACAGGACTCCCATGACAAGGAGTACATCAATGGCGACAAGTATTTCCAGCAGATTTTTGACTGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS CAA 72 bp | TTTAGGCGGGGGCAGTCAAAAATCTGCTGGAAATACTaGTCGCCATTGATGTACTCCTTGTCATGGGAGTCC | + |
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Preference number: 6 (lower is better) Translates to: FRRGQSKICWKY*SPLMYSLSWES Trigger: GGACTCCCATGACAAGGAGTACATCAATGGCGACAAGTATTTCCAGCAGATTTTTGACTGCCCCCGCCTAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS CAA 90 bp | CAGTCAAAAATCTGCTGGAAATACTTGTCGCCATTGATGTACTCCTaGTCATGGGAGTCCTGTAGCCTGTTGGTCTTCACATACTGCCAC | + |
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Preference number: 6 (lower is better) Translates to: QSKICWKYLSPLMYS*SWESCSLLVFTYCH Trigger: GTGGCAGTATGTGAAGACCAACAGGCTACAGGACTCCCATGACAAGGAGTACATCAATGGCGACAAGTATTTCCAGCAGATTTTTGACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS TCA 72 bp | GGCAGTCAAAAATCTGCTGGAAATACTTGTCGCCATTaGTGTACTCCTTGTCATGGGAGTCCTGTAGCCTGT | + |
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Preference number: 6 (lower is better) Translates to: GSQKSAGNTCRH*CTPCHGSPVAC Trigger: ACAGGCTACAGGACTCCCATGACAAGGAGTACATCAATGGCGACAAGTATTTCCAGCAGATTTTTGACTGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS CCA 72 bp | TGGAAATACTTGTCGCCATTGATGTACTCCTTGTCATaGGAGTCCTGTAGCCTGTTGGTCTTCACATACTGC | + |
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Preference number: 6 (lower is better) Translates to: WKYLSPLMYSLS*ESCSLLVFTYC Trigger: GCAGTATGTGAAGACCAACAGGCTACAGGACTCCCATGACAAGGAGTACATCAATGGCGACAAGTATTTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS CAA 72 bp | ATCTGCTGGAAATACTTGTCGCCATTGATGTACTCCTaGTCATGGGAGTCCTGTAGCCTGTTGGTCTTCACA | + |
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Preference number: 6 (lower is better) Translates to: ICWKYLSPLMYS*SWESCSLLVFT Trigger: TGTGAAGACCAACAGGCTACAGGACTCCCATGACAAGGAGTACATCAATGGCGACAAGTATTTCCAGCAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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| CDS GCA 72 bp | ATCTCAGAGAACTTTAGGCGGGGGCAGTCAAAAATCTaGTGGAAATACTTGTCGCCATTGATGTACTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: ISENFRRGQSKI*WKYLSPLMYSL Trigger: CAAGGAGTACATCAATGGCGACAAGTATTTCCAGCAGATTTTTGACTGCCCCCGCCTAAAGTTCTCTGAGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000030791.12 ENSMUST00000195943.2 |
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