Pregenerated sensors for SMARCD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078619Ensembl transcript IDs: ENSMUST00000021052.16, ENSMUST00000106843.8, ENSMUST00000140255.3
Found 186 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATTGCCACTCTCAGGAGATTCCACCTCCCCCTGCCCAAGCAGCTATaGGTGGGCAGCCTTGTGGCATACCAGGAGATGATGGCGGCTGCA | + |
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Preference number: 1 (lower is better) Translates to: IATLRRFHLPLPKQL*VGSLVAYQEMMAAA Trigger: TGCAGCCGCCATCATCTCCTGGTATGCCACAAGGCTGCCCACCCATAGCTGCTTGGGCAGGGGGAGGTGGAATCTCCTGAGAGTGGCAAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
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| 3UTR GCA 90 bp | GAGTGGAGGGTGACAGGAAACACACCTCACTCCATCCTACATGTCTaGAGCCCAAGCCAGAACCCAGAGGACGGGCTCTTGCCAGGTTCC | + |
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Preference number: 1 (lower is better) Translates to: EWRVTGNTPHSILHV*SPSQNPEDGLLPGS Trigger: GGAACCTGGCAAGAGCCCGTCCTCTGGGTTCTGGCTTGGGCTGCAGACATGTAGGATGGAGTGAGGTGTGTTTCCTGTCACCCTCCACTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
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| 3UTR GCA 90 bp | GTTAGAGAACTGGCATTGCCACTCTCAGGAGATTCCACCTCCCCCTaGCCAAGCAGCTATGGGTGGGCAGCCTTGTGGCATACCAGGAGA | + |
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Preference number: 1 (lower is better) Translates to: VRELALPLSGDSTSP*PSSYGWAALWHTRR Trigger: TCTCCTGGTATGCCACAAGGCTGCCCACCCATAGCTGCTTGGGCAGGGGGAGGTGGAATCTCCTGAGAGTGGCAATGCCAGTTCTCTAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
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| 3UTR GCA 90 bp | GCACGCACACACACCCCTGCTGTAACTGGGTTAGAGAACTGGCATTaGCACTCTCAGGAGATTCCACCTCCCCCTGCCCAAGCAGCTATG | + |
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Preference number: 1 (lower is better) Translates to: ARTHTPAVTGLENWH*HSQEIPPPPAQAAM Trigger: CATAGCTGCTTGGGCAGGGGGAGGTGGAATCTCCTGAGAGTGGCAATGCCAGTTCTCTAACCCAGTTACAGCAGGGGTGTGTGTGCGTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
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| 3UTR TCA 90 bp | GGATCTAAAACTACATTTATGAAACTAAAGCTGGGGAGTGGAGGGTaGCAGGAAACACACCTCACTCCATCCTACATGTCTGCAGCCCAA | + |
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Preference number: 1 (lower is better) Translates to: GSKTTFMKLKLGSGG*QETHLTPSYMSAAQ Trigger: TTGGGCTGCAGACATGTAGGATGGAGTGAGGTGTGTTTCCTGTCACCCTCCACTCCCCAGCTTTAGTTTCATAAATGTAGTTTTAGATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
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| 3UTR CCA 90 bp | GCAAACCCAATTAAAGCCAGCGCTAAAAGGTCAGTAATAAGGCTTTaGGAACCAAGCAGTGAGGGATCTAAAACTACATTTATGAAACTA | + |
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Preference number: 1 (lower is better) Translates to: ANPIKASAKRSVIRL*EPSSEGSKTTFMKL Trigger: TAGTTTCATAAATGTAGTTTTAGATCCCTCACTGCTTGGTTCCCAAAGCCTTATTACTGACCTTTTAGCGCTGGCTTTAATTGGGTTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
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| 3UTR-3UTR GCA 90 bp | TCTTTAAGACCGACTGCAAAAGGTAACAGCAGTCCTCCAGCTTTCCCCTTCCCCTCAGGCCTGCCTGCCTaGAGGGGGCTGAGGCCGCTC | + |
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Preference number: 2 (lower is better) Translates to: SLRPTAKGNSSPPAFPFPSGLPA*RGLRPL Trigger: GAGCGGCCTCAGCCCCCTGCAGGCAGGCAGGCCTGA...GGGGAAGGGGAAAGCTGGAGGACTGCTGTTACCTTTTGCAGTCGGTCTTAAAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
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| 3UTR CAA 90 bp | CGCACGCACACACACCCCTGCTGTAACTGGGTTAGAGAACTGGCATaGCCACTCTCAGGAGATTCCACCTCCCCCTGCCCAAGCAGCTAT | + |
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Preference number: 2 (lower is better) Translates to: RTHTHPCCNWVRELA*PLSGDSTSPCPSSY Trigger: ATAGCTGCTTGGGCAGGGGGAGGTGGAATCTCCTGAGAGTGGCAATGCCAGTTCTCTAACCCAGTTACAGCAGGGGTGTGTGTGCGTGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
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| 3UTR-3UTR TCA 90 bp | CGCACGCACACACACCCCTGCTGTAACTGGGTTAGAGAACTGGCATTGCCACTCCTGGGGAGTGGAGGGTaGCAGGAAACACACCTCACT | + |
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Preference number: 2 (lower is better) Translates to: RTHTHPCCNWVRELALPLLGSGG*QETHLT Trigger: AGTGAGGTGTGTTTCCTGTCACCCTCCACTCCCCAG...GAGTGGCAATGCCAGTTCTCTAACCCAGTTACAGCAGGGGTGTGTGTGCGTGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
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| 3UTR-3UTR GCA 90 bp | ACGCACACACACCCCTGCTGTAACTGGGTTAGAGAACTGGCATTGCCACTCTCACAGAGGACGGGCTCTTaGCAGGTTCCATCCAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: THTHPCCNWVRELALPLSQRTGS*QVPSRA Trigger: TGCCCTGGATGGAACCTGGCAAGAGCCCGTCCTCTG...TGAGAGTGGCAATGCCAGTTCTCTAACCCAGTTACAGCAGGGGTGTGTGTGCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
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| 3UTR-3UTR GCA 90 bp | ACGCACACACACCCCTGCTGTAACTGGGTTAGAGAACTGGCATTGCCACTCTCAGATTCCACCTCCCCCTaGCCAAGCAGCTATGGGTGG | + |
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Preference number: 2 (lower is better) Translates to: THTHPCCNWVRELALPLSDSTSP*PSSYGW Trigger: CCACCCATAGCTGCTTGGGCAGGGGGAGGTGGAATC...TGAGAGTGGCAATGCCAGTTCTCTAACCCAGTTACAGCAGGGGTGTGTGTGCGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
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| 3UTR-3UTR TCA 90 bp | TGTAACTGGGTTAGAGAACTGGCATTGCCACTCTCAGGAGATTCCACCTCCCCCCTGGGGAGTGGAGGGTaGCAGGAAACACACCTCACT | + |
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Preference number: 2 (lower is better) Translates to: CNWVRELALPLSGDSTSPLGSGG*QETHLT Trigger: AGTGAGGTGTGTTTCCTGTCACCCTCCACTCCCCAG...GGGGGAGGTGGAATCTCCTGAGAGTGGCAATGCCAGTTCTCTAACCCAGTTACA 56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
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| 3UTR-3UTR GCA 90 bp | AATTTTCCAAGTTTGCCAAGCCTTAGGCCCATCCTCTTTAAGACCGACTGCAAATCAGGCCTGCCTGCCTaGAGGGGGCTGAGGCCGCTC | + |
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Preference number: 2 (lower is better) Translates to: NFPSLPSLRPILFKTDCKSGLPA*RGLRPL Trigger: GAGCGGCCTCAGCCCCCTGCAGGCAGGCAGGCCTGA...TTTGCAGTCGGTCTTAAAGAGGATGGGCCTAAGGCTTGGCAAACTTGGAAAATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGCTGTAACTGGGTTAGAGAACTGGCATTGCCACTCTCAGGAGATTCCACCTGGGCCTTCTCTTCCTTaGCCAGCTCCCCAAAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: PAVTGLENWHCHSQEIPPGPSLP*PAPQSQ Trigger: CTGGCTTTGGGGAGCTGGGCAAGGAAGAGAAGGCCC...AGGTGGAATCTCCTGAGAGTGGCAATGCCAGTTCTCTAACCCAGTTACAGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
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| 3UTR-3UTR GCA 90 bp | TGTAACTGGGTTAGAGAACTGGCATTGCCACTCTCAGGAGATTCCACCTCCCCCGGAGATGATGGCGGCTaGAGCCGCTTGCATAGATTA | + |
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Preference number: 2 (lower is better) Translates to: CNWVRELALPLSGDSTSPGDDGG*SRLHRL Trigger: TAATCTATGCAAGCGGCTGCAGCCGCCATCATCTCC...GGGGGAGGTGGAATCTCCTGAGAGTGGCAATGCCAGTTCTCTAACCCAGTTACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
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| 3UTR-3UTR CCA 90 bp | CGCACGCACACACACCCCTGCTGTAACTGGGTTAGAGAACTGGCATTGCCACTCAACCAGCAGCAAGACTaGGCTTGTAGGAATGGCAAA | + |
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Preference number: 2 (lower is better) Translates to: RTHTHPCCNWVRELALPLNQQQD*ACRNGK Trigger: TTTGCCATTCCTACAAGCCCAGTCTTGCTGCTGGTT...GAGTGGCAATGCCAGTTCTCTAACCCAGTTACAGCAGGGGTGTGTGTGCGTGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
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| 3UTR-3UTR GCA 90 bp | GGCATTGCCACTCTCAGGAGATTCCACCTCCCCCTGCCCAAGCAGCTATGGGTGCCACATAGAAAAACCTaGTCCCCAAATAGTGCAAAT | + |
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Preference number: 2 (lower is better) Translates to: GIATLRRFHLPLPKQLWVPHRKT*SPNSAN Trigger: ATTTGCACTATTTGGGGAGCAGGTTTTTCTATGTGG...CACCCATAGCTGCTTGGGCAGGGGGAGGTGGAATCTCCTGAGAGTGGCAATGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
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| 3UTR-3UTR GCA 90 bp | AAACCTGCTCCCCAAATAGTGCAAATACCCAAAAAGAAGGACAAACCAGCAGCACAGAGGACGGGCTCTTaGCAGGTTCCATCCAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: KPAPQIVQIPKKKDKPAAQRTGS*QVPSRA Trigger: TGCCCTGGATGGAACCTGGCAAGAGCCCGTCCTCTG...TGCTGCTGGTTTGTCCTTCTTTTTGGGTATTTGCACTATTTGGGGAGCAGGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
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| 3UTR-3UTR CCA 90 bp | GGCATTGCCACTCTCAGGAGATTCCACCTCCCCCTGCCCAAGCAGCTATGGGTGTGGTTTGGAAATGTCTaGTACAAAGTTAAAGCACAG | + |
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Preference number: 2 (lower is better) Translates to: GIATLRRFHLPLPKQLWVWFGNV*YKVKAQ Trigger: CTGTGCTTTAACTTTGTACCAGACATTTCCAAACCA...CACCCATAGCTGCTTGGGCAGGGGGAGGTGGAATCTCCTGAGAGTGGCAATGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGCATTGCCACTCTCAGGAGATTCCACCTCCCCCTGCCCAAGCAGCTATGGGTGGTTTGGAAATGTCTaGTACAAAGTTAAAGCACAG | + |
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Preference number: 2 (lower is better) Translates to: LALPLSGDSTSPCPSSYGWFGNV*YKVKAQ Trigger: CTGTGCTTTAACTTTGTACCAGACATTTCCAAACCA...CCCATAGCTGCTTGGGCAGGGGGAGGTGGAATCTCCTGAGAGTGGCAATGCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
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| 3UTR-3UTR CCA 90 bp | ACGCACACACACCCCTGCTGTAACTGGGTTAGAGAACTGGCATTGCCACTCTCAAAACCCAGCAGCCTTTaGTTTGGAAATGTCTGGTAC | + |
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Preference number: 2 (lower is better) Translates to: THTHPCCNWVRELALPLSKPSSL*FGNVWY Trigger: GTACCAGACATTTCCAAACCAAAGGCTGCTGGGTTT...TGAGAGTGGCAATGCCAGTTCTCTAACCCAGTTACAGCAGGGGTGTGTGTGCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
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| 3UTR-3UTR CCA 90 bp | TCTTTAAGACCGACTGCAAAAGGTAACAGCAGTCCTCCAGCTTTCCCCTTCCCCTCAGTAATAAGGCTTTaGGAACCAAGCAGTGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: SLRPTAKGNSSPPAFPFPSVIRL*EPSSEG Trigger: TCCCTCACTGCTTGGTTCCCAAAGCCTTATTACTGA...GGGGAAGGGGAAAGCTGGAGGACTGCTGTTACCTTTTGCAGTCGGTCTTAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
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| 3UTR-3UTR GCA 90 bp | TGTAACTGGGTTAGAGAACTGGCATTGCCACTCTCAGGAGATTCCACCTCCCCCCCACATAGAAAAACCTaGTCCCCAAATAGTGCAAAT | + |
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Preference number: 2 (lower is better) Translates to: CNWVRELALPLSGDSTSPPHRKT*SPNSAN Trigger: ATTTGCACTATTTGGGGAGCAGGTTTTTCTATGTGG...GGGGGAGGTGGAATCTCCTGAGAGTGGCAATGCCAGTTCTCTAACCCAGTTACA 48% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
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| 3UTR-3UTR CAA 90 bp | CGCACGCACACACACCCCTGCTGTAACTGGGTTAGAGAACTGGCATTGCCACTCCCAGAGGACGGGCTCTaGCCAGGTTCCATCCAGGGC | + |
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Preference number: 3 (lower is better) Translates to: RTHTHPCCNWVRELALPLPEDGL*PGSIQG Trigger: GCCCTGGATGGAACCTGGCAAGAGCCCGTCCTCTGG...GAGTGGCAATGCCAGTTCTCTAACCCAGTTACAGCAGGGGTGTGTGTGCGTGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
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| 3UTR-3UTR CAA 90 bp | GGCATTGCCACTCTCAGGAGATTCCACCTCCCCCTGCCCAAGCAGCTATGGGTGAGGGCCTTCTCTTCCTaGCCCAGCTCCCCAAAGCCA | + |
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Preference number: 3 (lower is better) Translates to: GIATLRRFHLPLPKQLWVRAFSS*PSSPKP Trigger: TGGCTTTGGGGAGCTGGGCAAGGAAGAGAAGGCCCT...CACCCATAGCTGCTTGGGCAGGGGGAGGTGGAATCTCCTGAGAGTGGCAATGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
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| 3UTR GCA 72 bp | CTGGCATTGCCACTCTCAGGAGATTCCACCTCCCCCTaGCCAAGCAGCTATGGGTGGGCAGCCTTGTGGCAT | + |
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Preference number: 3 (lower is better) Translates to: LALPLSGDSTSP*PSSYGWAALWH Trigger: ATGCCACAAGGCTGCCCACCCATAGCTGCTTGGGCAGGGGGAGGTGGAATCTCCTGAGAGTGGCAATGCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
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| 3UTR GCA 72 bp | CCCTGCAGCACGCACGCACGCACGCACACACACCCCTaGTGTAACTGGGTTAGAGAACTGGCATTGCCACTC | + |
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Preference number: 3 (lower is better) Translates to: PCSTHARTHTHP*CNWVRELALPL Trigger: GAGTGGCAATGCCAGTTCTCTAACCCAGTTACAGCAGGGGTGTGTGTGCGTGCGTGCGTGCGTGCTGCAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
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| 3UTR-3UTR CAA 90 bp | AGGAGATTCCACCTCCCCCTGCCCAAGCAGCTATGGGTGGGCAGCCTTGTGGCACAAACCCAGCAGCCTTaGGTTTGGAAATGTCTGGTA | + |
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Preference number: 3 (lower is better) Translates to: RRFHLPLPKQLWVGSLVAQTQQP*VWKCLV Trigger: TACCAGACATTTCCAAACCAAAGGCTGCTGGGTTTG...TGCCACAAGGCTGCCCACCCATAGCTGCTTGGGCAGGGGGAGGTGGAATCTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
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| 3UTR-3UTR CAA 90 bp | CTGGCATTGCCACTCTCAGGAGATTCCACCTCCCCCTGCCCAAGCAGCTATGGGCCAGCAGCCTTTGGTTaGGAAATGTCTGGTACAAAG | + |
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Preference number: 3 (lower is better) Translates to: LALPLSGDSTSPCPSSYGPAAFG*EMSGTK Trigger: CTTTGTACCAGACATTTCCAAACCAAAGGCTGCTGG...CCCATAGCTGCTTGGGCAGGGGGAGGTGGAATCTCCTGAGAGTGGCAATGCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
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| 3UTR TCA 72 bp | AGCACCTGTTCCAGTTCCTGCCTTCGCTGCTGCACCTaGAGAAGACGACAAAGCAAGCCTCAGGCTTCAGCT | + |
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Preference number: 3 (lower is better) Translates to: STCSSSCLRCCT*RRRQSKPQASA Trigger: AGCTGAAGCCTGAGGCTTGCTTTGTCGTCTTCTTCAGGTGCAGCAGCGAAGGCAGGAACTGGAACAGGTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140255.3 |
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| 3UTR-3UTR CAA 90 bp | AATTTTCCAAGTTTGCCAAGCCTTAGGCCCATCCTCTTTAAGACCGACTGCAAACCAGAGGACGGGCTCTaGCCAGGTTCCATCCAGGGC | + |
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Preference number: 3 (lower is better) Translates to: NFPSLPSLRPILFKTDCKPEDGL*PGSIQG Trigger: GCCCTGGATGGAACCTGGCAAGAGCCCGTCCTCTGG...TTTGCAGTCGGTCTTAAAGAGGATGGGCCTAAGGCTTGGCAAACTTGGAAAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
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| 3UTR CCA 72 bp | ATTAAAGCCAGCGCTAAAAGGTCAGTAATAAGGCTTTaGGAACCAAGCAGTGAGGGATCTAAAACTACATTT | + |
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Preference number: 3 (lower is better) Translates to: IKASAKRSVIRL*EPSSEGSKTTF Trigger: AAATGTAGTTTTAGATCCCTCACTGCTTGGTTCCCAAAGCCTTATTACTGACCTTTTAGCGCTGGCTTTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
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| CDS-3UTR CCA 90 bp | AGGAGATTCCACCTCCCCCTGCCCAAGCAGCTATGGGTGGGCAGCCTTGTGGCAATGTACTCGCGCTCATaGCCGTCCTGCAGCTGGTTG | + |
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Preference number: 4 (lower is better) Translates to: RRFHLPLPKQLWVGSLVAMYSRS*PSCSWL Trigger: CAACCAGCTGCAGGACGGCCATGAGCGCGAGTACAT...TGCCACAAGGCTGCCCACCCATAGCTGCTTGGGCAGGGGGAGGTGGAATCTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
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| CDS-3UTR TCA 90 bp | GCAATCCCTGAGCAGTTAGGTCAGGCGAATTCCCAGCACCTGTTCCAGTTCCTGGGAGCCACTCCTGGATaGAGTCCTGGGGCTCGGTGC | + |
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Preference number: 4 (lower is better) Translates to: AIPEQLGQANSQHLFQFLGATPG*SPGARC Trigger: GCACCGAGCCCCAGGACTTCATCCAGGAGTGGCTCC...CAGGAACTGGAACAGGTGCTGGGAATTCGCCTGACCTAACTGCTCAGGGATTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140255.3 |
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| CDS-3UTR CCA 90 bp | CTGGCATTGCCACTCTCAGGAGATTCCACCTCCCCCTGCCCAAGCAGCTATGGGTCCGCTTGCGAGCGATaGTCTGGTCCAGCTTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: LALPLSGDSTSPCPSSYGSACER*SGPASS Trigger: AGAGGAAGCTGGACCAGACCATCGCTCGCAAGCGGA...CCCATAGCTGCTTGGGCAGGGGGAGGTGGAATCTCCTGAGAGTGGCAATGCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
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| CDS-3UTR TCA 90 bp | GTTCCTGCCTTCGCTGCTGCACCTGAAGAAGACGACAAAGCAAGCCTCAGGCTTGCCACAGTGCCTGCATaGTTGCCGCCCTGGTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: VPAFAAAPEEDDKASLRLATVPA*LPPWSV Trigger: CACAGACCAGGGCGGCAATCATGCAGGCACTGTGGC...AAGCCTGAGGCTTGCTTTGTCGTCTTCTTCAGGTGCAGCAGCGAAGGCAGGAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140255.3 |
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| CDS-3UTR GCA 90 bp | CTGGCATTGCCACTCTCAGGAGATTCCACCTCCCCCTGCCCAAGCAGCTATGGGGAATCTCCATCCGCTTaGGAGCGATGGTCTGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: LALPLSGDSTSPCPSSYGESPSA*ERWSGP Trigger: TGGACCAGACCATCGCTCGCAAGCGGATGGAGATTC...CCCATAGCTGCTTGGGCAGGGGGAGGTGGAATCTCCTGAGAGTGGCAATGCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
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| CDS-3UTR GCA 90 bp | GGCATTGCCACTCTCAGGAGATTCCACCTCCCCCTGCCCAAGCAGCTATGGGTGCGCTCATGGCCGTCCTaGAGCTGGTTGTGTTTGATG | + |
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Preference number: 4 (lower is better) Translates to: GIATLRRFHLPLPKQLWVRSWPS*SWLCLM Trigger: CATCAAACACAACCAGCTGCAGGACGGCCATGAGCG...CACCCATAGCTGCTTGGGCAGGGGGAGGTGGAATCTCCTGAGAGTGGCAATGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
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| CDS-3UTR GCA 90 bp | AGGAGATTCCACCTCCCCCTGCCCAAGCAGCTATGGGTGGGCAGCCTTGTGGCAAGTTCCTGCCTTCGCTaGTGCACCTTGGCAAAGATG | + |
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Preference number: 4 (lower is better) Translates to: RRFHLPLPKQLWVGSLVASSCLR*CTLAKM Trigger: CATCTTTGCCAAGGTGCAGCAGCGAAGGCAGGAACT...TGCCACAAGGCTGCCCACCCATAGCTGCTTGGGCAGGGGGAGGTGGAATCTCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
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| CDS-3UTR CCA 90 bp | CTGGCATTGCCACTCTCAGGAGATTCCACCTCCCCCTGCCCAAGCAGCTATGGGGAAGCAATCTCCTGCTaGTTGGTGGTAGAGGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LALPLSGDSTSPCPSSYGEAISC*LVVEAR Trigger: CCTGGCCTCTACCACCAACCAGCAGGAGATTGCTTC...CCCATAGCTGCTTGGGCAGGGGGAGGTGGAATCTCCTGAGAGTGGCAATGCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
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| CDS-3UTR CCA 90 bp | GGCACTGGCCCTAGGGTGGAGCCTGTAAACATGCAAACCCAGCAGCCTTTGGTTTTGAGGTCTCGGCGTTaGGAACGGAGCCACTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: GTGPRVEPVNMQTQQPLVLRSRR*ERSHSW Trigger: CCAGGAGTGGCTCCGTTCCCAACGCCGAGACCTCAA...AACCAAAGGCTGCTGGGTTTGCATGTTTACAGGCTCCACCCTAGGGCCAGTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
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| CDS-3UTR TCA 90 bp | AGGAGATTCCACCTCCCCCTGCCCAAGCAGCTATGGGTGGGCAGCCTTGTGGCAGCAGCTGGTTGTGTTTaGTGTAAAGCCACAGTGCCT | + |
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Preference number: 4 (lower is better) Translates to: RRFHLPLPKQLWVGSLVAAAGCV*CKATVP Trigger: AGGCACTGTGGCTTTACATCAAACACAACCAGCTGC...TGCCACAAGGCTGCCCACCCATAGCTGCTTGGGCAGGGGGAGGTGGAATCTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
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| CDS-3UTR TCA 90 bp | TCTTTAAGACCGACTGCAAAAGGTAACAGCAGTCCTCCAGCTTTCCCCTTCCCCGGAGCCACTCCTGGATaGAGTCCTGGGGCTCGGTGC | + |
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Preference number: 4 (lower is better) Translates to: SLRPTAKGNSSPPAFPFPGATPG*SPGARC Trigger: GCACCGAGCCCCAGGACTTCATCCAGGAGTGGCTCC...GGGGAAGGGGAAAGCTGGAGGACTGCTGTTACCTTTTGCAGTCGGTCTTAAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
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| CDS-3UTR GCA 90 bp | TGTAACTGGGTTAGAGAACTGGCATTGCCACTCTCAGGAGATTCCACCTCCCCCGCAGGAGGTCCCACCTaGAAGCCAGCCATGGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: CNWVRELALPLSGDSTSPAGGPT*KPAMGI Trigger: GATGCCCATGGCTGGCTTGCAGGTGGGACCTCCTGC...GGGGGAGGTGGAATCTCCTGAGAGTGGCAATGCCAGTTCTCTAACCCAGTTACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR CCA 90 bp | AGGAGATTCCACCTCCCCCTGCCCAAGCAGCTATGGGTGGGCAGCCTTGTGGCACAGGCGTTTTCGGAATaGATCCATCATGGTAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RRFHLPLPKQLWVGSLVAQAFSE*IHHGRW Trigger: CCACCTACCATGATGGATCCATTCCGAAAACGCCTG...TGCCACAAGGCTGCCCACCCATAGCTGCTTGGGCAGGGGGAGGTGGAATCTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR CCA 90 bp | AGGAGATTCCACCTCCCCCTGCCCAAGCAGCTATGGGTGGGCAGCCTTGTGGCAGACATTGAGATCTCCTaGCCGTTTCACCTGAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RRFHLPLPKQLWVGSLVADIEIS*PFHLKA Trigger: GGCTTTCAGGTGAAACGGCCAGGAGATCTCAATGTC...TGCCACAAGGCTGCCCACCCATAGCTGCTTGGGCAGGGGGAGGTGGAATCTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR CCA 90 bp | GTTCCTGCCTTCGCTGCTGCACCTGAAGAAGACGACAAAGCAAGCCTCAGGCTTGAACGGAGCCACTCCTaGATGAAGTCCTGGGGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: VPAFAAAPEEDDKASLRLERSHS*MKSWGS Trigger: CGAGCCCCAGGACTTCATCCAGGAGTGGCTCCGTTC...AAGCCTGAGGCTTGCTTTGTCGTCTTCTTCAGGTGCAGCAGCGAAGGCAGGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140255.3 |
||
| CDS-3UTR CCA 90 bp | GTTCCAGTTCCTGCCTTCGCTGCTGCACCTGAAGAAGACGACAAAGCAAGCCTCTTGAGGTCTCGGCGTTaGGAACGGAGCCACTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VPVPAFAAAPEEDDKASLLRSRR*ERSHSW Trigger: CCAGGAGTGGCTCCGTTCCCAACGCCGAGACCTCAA...GAGGCTTGCTTTGTCGTCTTCTTCAGGTGCAGCAGCGAAGGCAGGAACTGGAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140255.3 |
||
| CDS-3UTR TCA 90 bp | GGCACTGGCCCTAGGGTGGAGCCTGTAAACATGCAAACCCAGCAGCCTTTGGTTAGCTCCCGGATTCGCTaGGGTAGAACCTTATCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GTGPRVEPVNMQTQQPLVSSRIR*GRTLSA Trigger: GGCAGATAAGGTTCTACCTCAGCGAATCCGGGAGCT...AACCAAAGGCTGCTGGGTTTGCATGTTTACAGGCTCCACCCTAGGGCCAGTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR TCA 90 bp | AGGAGATTCCACCTCCCCCTGCCCAAGCAGCTATGGGTGGGCAGCCTTGTGGCACCGCCTTGCTGGGGCTaGATGTATTGGAAATATAGA | + |
|
Preference number: 4 (lower is better) Translates to: RRFHLPLPKQLWVGSLVAPPCWG*MYWKYR Trigger: TCTATATTTCCAATACATTCAGCCCCAGCAAGGCGG...TGCCACAAGGCTGCCCACCCATAGCTGCTTGGGCAGGGGGAGGTGGAATCTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR TCA 90 bp | CTGGCATTGCCACTCTCAGGAGATTCCACCTCCCCCTGCCCAAGCAGCTATGGGGCAGCTGGTTGTGTTTaGTGTAAAGCCACAGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LALPLSGDSTSPCPSSYGAAGCV*CKATVP Trigger: AGGCACTGTGGCTTTACATCAAACACAACCAGCTGC...CCCATAGCTGCTTGGGCAGGGGGAGGTGGAATCTCCTGAGAGTGGCAATGCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR TCA 90 bp | CTGCCTTCGCTGCTGCACCTGAAGAAGACGACAAAGCAAGCCTCAGGCTTCAGCGGAGTCGGCCACAACTaGAGATCTGGCGGAAGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: LPSLLHLKKTTKQASGFSGVGHN*RSGGSN Trigger: GTTACTTCCGCCAGATCTTCAGTTGTGGCCGACTCC...GCTGAAGCCTGAGGCTTGCTTTGTCGTCTTCTTCAGGTGCAGCAGCGAAGGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140255.3 |
||
| CDS-3UTR TCA 90 bp | GCCAGCGCTAAAAGGTCAGTAATAAGGCTTTGGGAACCAAGCAGTGAGGGATCTGGAGCCACTCCTGGATaGAGTCCTGGGGCTCGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ASAKRSVIRLWEPSSEGSGATPG*SPGARC Trigger: GCACCGAGCCCCAGGACTTCATCCAGGAGTGGCTCC...AGATCCCTCACTGCTTGGTTCCCAAAGCCTTATTACTGACCTTTTAGCGCTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR GCA 90 bp | TCTTTAAGACCGACTGCAAAAGGTAACAGCAGTCCTCCAGCTTTCCCCTTCCCCGCAGGAGGTCCCACCTaGAAGCCAGCCATGGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: SLRPTAKGNSSPPAFPFPAGGPT*KPAMGI Trigger: GATGCCCATGGCTGGCTTGCAGGTGGGACCTCCTGC...GGGGAAGGGGAAAGCTGGAGGACTGCTGTTACCTTTTGCAGTCGGTCTTAAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR GCA 90 bp | CCTGAGCAGTTAGGTCAGGCGAATTCCCAGCACCTGTTCCAGTTCCTGCCTTCGCGCTCATGGCCGTCCTaGAGCTGGTTGTGTTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: PEQLGQANSQHLFQFLPSRSWPS*SWLCLM Trigger: CATCAAACACAACCAGCTGCAGGACGGCCATGAGCG...CGAAGGCAGGAACTGGAACAGGTGCTGGGAATTCGCCTGACCTAACTGCTCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140255.3 |
||
| CDS-3UTR CCA 90 bp | TGTAACTGGGTTAGAGAACTGGCATTGCCACTCTCAGGAGATTCCACCTCCCCCCCTGCAAGCCAGCCATaGGCATCCTGCTTCCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: CNWVRELALPLSGDSTSPPASQP*ASCFLV Trigger: CACCAGGAAGCAGGATGCCCATGGCTGGCTTGCAGG...GGGGGAGGTGGAATCTCCTGAGAGTGGCAATGCCAGTTCTCTAACCCAGTTACA 57% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR CCA 90 bp | CGCACGCACACACACCCCTGCTGTAACTGGGTTAGAGAACTGGCATTGCCACTCCTGTTTCCTGTGTGGTaGGCATCCGATGCCACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RTHTHPCCNWVRELALPLLFPVW*ASDATP Trigger: TGGAGTGGCATCGGATGCCCACCACACAGGAAACAG...GAGTGGCAATGCCAGTTCTCTAACCCAGTTACAGCAGGGGTGTGTGTGCGTGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR CCA 90 bp | CTGGCATTGCCACTCTCAGGAGATTCCACCTCCCCCTGCCCAAGCAGCTATGGGGACATTGAGATCTCCTaGCCGTTTCACCTGAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LALPLSGDSTSPCPSSYGDIEIS*PFHLKA Trigger: GGCTTTCAGGTGAAACGGCCAGGAGATCTCAATGTC...CCCATAGCTGCTTGGGCAGGGGGAGGTGGAATCTCCTGAGAGTGGCAATGCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR CCA 90 bp | GAGGCAATCCCTGAGCAGTTAGGTCAGGCGAATTCCCAGCACCTGTTCCAGTTCATGTACTCGCGCTCATaGCCGTCCTGCAGCTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: EAIPEQLGQANSQHLFQFMYSRS*PSCSWL Trigger: CAACCAGCTGCAGGACGGCCATGAGCGCGAGTACAT...GAACTGGAACAGGTGCTGGGAATTCGCCTGACCTAACTGCTCAGGGATTGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140255.3 |
||
| CDS-3UTR CCA 90 bp | CGCACGCACACACACCCCTGCTGTAACTGGGTTAGAGAACTGGCATTGCCACTCTTCGCTGCTGCACCTTaGCAAAGATGTGCCTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RTHTHPCCNWVRELALPLFAAAP*QRCASP Trigger: TGGGGAGGCACATCTTTGCCAAGGTGCAGCAGCGAA...GAGTGGCAATGCCAGTTCTCTAACCCAGTTACAGCAGGGGTGTGTGTGCGTGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR CCA 90 bp | CTGCCTTCGCTGCTGCACCTGAAGAAGACGACAAAGCAAGCCTCAGGCTTCAGCGGCAAAGCCTCACCTTaGCAAAGATGTGCCTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPSLLHLKKTTKQASGFSGKASP*QRCASP Trigger: TGGGGAGGCACATCTTTGCCAAGGTGAGGCTTTGCC...GCTGAAGCCTGAGGCTTGCTTTGTCGTCTTCTTCAGGTGCAGCAGCGAAGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140255.3 |
||
| CDS-3UTR TCA 90 bp | GGCATTGCCACTCTCAGGAGATTCCACCTCCCCCTGCCCAAGCAGCTATGGGTGGGGTCTTTAGCTGGTTaGTGGACTCAATGGTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GIATLRRFHLPLPKQLWVGSLAG*WTQWSH Trigger: ATGAGACCATTGAGTCCATCAACCAGCTAAAGACCC...CACCCATAGCTGCTTGGGCAGGGGGAGGTGGAATCTCCTGAGAGTGGCAATGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR GCA 90 bp | AGGAGATTCCACCTCCCCCTGCCCAAGCAGCTATGGGTGGGCAGCCTTGTGGCACGAAGTTTTCGCTTTTaGGTCAGAGGCTTCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: RRFHLPLPKQLWVGSLVARSFRF*VRGFLM Trigger: CATCAAGAAGCCTCTGACGCAAAAGCGAAAACTTCG...TGCCACAAGGCTGCCCACCCATAGCTGCTTGGGCAGGGGGAGGTGGAATCTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR GCA 90 bp | GTTCCAGTTCCTGCCTTCGCTGCTGCACCTGAAGAAGACGACAAAGCAAGCCTCATGGGGTCTGGATGCTaGAGCAATCCAGCCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VPVPAFAAAPEEDDKASLMGSGC*SNPASF Trigger: GAAGCTGGCTGGATTGCTGCAGCATCCAGACCCCAT...GAGGCTTGCTTTGTCGTCTTCTTCAGGTGCAGCAGCGAAGGCAGGAACTGGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140255.3 |
||
| CDS-3UTR GCA 90 bp | GCCTTCGCTGCTGCACCTGAAGAAGACGACAAAGCAAGCCTCAGGCTTCAGCTTACAATGGGGTCTGGATaGTGCAGCAATCCAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AFAAAPEEDDKASLRLQLTMGSG*CSNPAS Trigger: GCTGGCTGGATTGCTGCAGCATCCAGACCCCATTGT...AAGCTGAAGCCTGAGGCTTGCTTTGTCGTCTTCTTCAGGTGCAGCAGCGAAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140255.3 |
||
| CDS-3UTR GCA 90 bp | GGCACTGGCCCTAGGGTGGAGCCTGTAAACATGCAAACCCAGCAGCCTTTGGTTAGAGAAGCAATCTCCTaGTGGTTGGTGGTAGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GTGPRVEPVNMQTQQPLVREAIS*WLVVEA Trigger: GGCCTCTACCACCAACCAGCAGGAGATTGCTTCTCT...AACCAAAGGCTGCTGGGTTTGCATGTTTACAGGCTCCACCCTAGGGCCAGTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR GCA 90 bp | CTGCCTTCGCTGCTGCACCTGAAGAAGACGACAAAGCAAGCCTCAGGCTTCAGCAGAGAAGCAATCTCCTaGTGGTTGGTGGTAGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LPSLLHLKKTTKQASGFSREAIS*WLVVEA Trigger: GGCCTCTACCACCAACCAGCAGGAGATTGCTTCTCT...GCTGAAGCCTGAGGCTTGCTTTGTCGTCTTCTTCAGGTGCAGCAGCGAAGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140255.3 |
||
| CDS-3UTR CCA 90 bp | AGGAAGGAGGCAATCCCTGAGCAGTTAGGTCAGGCGAATTCCCAGCACCTGTTCGAAGCAATCTCCTGCTaGTTGGTGGTAGAGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RKEAIPEQLGQANSQHLFEAISC*LVVEAR Trigger: CCTGGCCTCTACCACCAACCAGCAGGAGATTGCTTC...GAACAGGTGCTGGGAATTCGCCTGACCTAACTGCTCAGGGATTGCCTCCTTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140255.3 |
||
| CDS-3UTR CCA 90 bp | GAGGCAATCCCTGAGCAGTTAGGTCAGGCGAATTCCCAGCACCTGTTCCAGTTCTCCTGGATGAAGTCCTaGGGCTCGGTGCTAAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EAIPEQLGQANSQHLFQFSWMKS*GSVLKL Trigger: CAGCTTTAGCACCGAGCCCCAGGACTTCATCCAGGA...GAACTGGAACAGGTGCTGGGAATTCGCCTGACCTAACTGCTCAGGGATTGCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140255.3 |
||
| CDS-3UTR TCA 90 bp | CTGCCTTCGCTGCTGCACCTGAAGAAGACGACAAAGCAAGCCTCAGGCTTCAGCGCAGCTGGTTGTGTTTaGTGTAAAGCCACAGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LPSLLHLKKTTKQASGFSAAGCV*CKATVP Trigger: AGGCACTGTGGCTTTACATCAAACACAACCAGCTGC...GCTGAAGCCTGAGGCTTGCTTTGTCGTCTTCTTCAGGTGCAGCAGCGAAGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140255.3 |
||
| CDS-3UTR TCA 90 bp | TGTAACTGGGTTAGAGAACTGGCATTGCCACTCTCAGGAGATTCCACCTCCCCCGGAGTCGGCCACAACTaGAGATCTGGCGGAAGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: CNWVRELALPLSGDSTSPGVGHN*RSGGSN Trigger: GTTACTTCCGCCAGATCTTCAGTTGTGGCCGACTCC...GGGGGAGGTGGAATCTCCTGAGAGTGGCAATGCCAGTTCTCTAACCCAGTTACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR GCA 90 bp | ACTTTGGTTAGAAAGGCCAGGAAGAGTCTAGGGCCTTCTCTTCCTTGCCCAGCTCAGCCATGGGCATCCTaGTTCCTGGTGACATGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TLVRKARKSLGPSLPCPAQPWAS*FLVTCQ Trigger: CTGGCATGTCACCAGGAAGCAGGATGCCCATGGCTG...AGCTGGGCAAGGAAGAGAAGGCCCTAGACTCTTCCTGGCCTTTCTAACCAAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR GCA 90 bp | TGTAACTGGGTTAGAGAACTGGCATTGCCACTCTCAGGAGATTCCACCTCCCCCGAATCTCCATCCGCTTaGGAGCGATGGTCTGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CNWVRELALPLSGDSTSPESPSA*ERWSGP Trigger: TGGACCAGACCATCGCTCGCAAGCGGATGGAGATTC...GGGGGAGGTGGAATCTCCTGAGAGTGGCAATGCCAGTTCTCTAACCCAGTTACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR GCA 90 bp | TGTAACTGGGTTAGAGAACTGGCATTGCCACTCTCAGGAGATTCCACCTCCCCCATGGGGTCTGGATGCTaGAGCAATCCAGCCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CNWVRELALPLSGDSTSPMGSGC*SNPASF Trigger: GAAGCTGGCTGGATTGCTGCAGCATCCAGACCCCAT...GGGGGAGGTGGAATCTCCTGAGAGTGGCAATGCCAGTTCTCTAACCCAGTTACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR GCA 90 bp | ACGCACACACACCCCTGCTGTAACTGGGTTAGAGAACTGGCATTGCCACTCTCAACAATGGGGTCTGGATaGTGCAGCAATCCAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: THTHPCCNWVRELALPLSTMGSG*CSNPAS Trigger: GCTGGCTGGATTGCTGCAGCATCCAGACCCCATTGT...TGAGAGTGGCAATGCCAGTTCTCTAACCCAGTTACAGCAGGGGTGTGTGTGCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR CCA 90 bp | CCTGCTGTAACTGGGTTAGAGAACTGGCATTGCCACTCTCAGGAGATTCCACCTATCCATCATGGTAGGTaGCATGCCAGGTCGGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PAVTGLENWHCHSQEIPPIHHGR*HARSER Trigger: CCGCTCCGACCTGGCATGCCACCTACCATGATGGAT...AGGTGGAATCTCCTGAGAGTGGCAATGCCAGTTCTCTAACCCAGTTACAGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR CCA 90 bp | ACTTTGGTTAGAAAGGCCAGGAAGAGTCTAGGGCCTTCTCTTCCTTGCCCAGCTATCCATCATGGTAGGTaGCATGCCAGGTCGGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: TLVRKARKSLGPSLPCPAIHHGR*HARSER Trigger: CCGCTCCGACCTGGCATGCCACCTACCATGATGGAT...AGCTGGGCAAGGAAGAGAAGGCCCTAGACTCTTCCTGGCCTTTCTAACCAAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR CCA 90 bp | TGTAACTGGGTTAGAGAACTGGCATTGCCACTCTCAGGAGATTCCACCTCCCCCGTATGCCTGAGACTCTaGGACAAGCTCCCGGATTCG | + |
|
Preference number: 4 (lower is better) Translates to: CNWVRELALPLSGDSTSPVCLRL*DKLPDS Trigger: CGAATCCGGGAGCTTGTCCCAGAGTCTCAGGCATAC...GGGGGAGGTGGAATCTCCTGAGAGTGGCAATGCCAGTTCTCTAACCCAGTTACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR CCA 90 bp | ACTTTGGTTAGAAAGGCCAGGAAGAGTCTAGGGCCTTCTCTTCCTTGCCCAGCTATGTACTCGCGCTCATaGCCGTCCTGCAGCTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TLVRKARKSLGPSLPCPAMYSRS*PSCSWL Trigger: CAACCAGCTGCAGGACGGCCATGAGCGCGAGTACAT...AGCTGGGCAAGGAAGAGAAGGCCCTAGACTCTTCCTGGCCTTTCTAACCAAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR CCA 90 bp | CGCACGCACACACACCCCTGCTGTAACTGGGTTAGAGAACTGGCATTGCCACTCATCCAGCCAGCTTCATaGGAATCTCGGAGAAACGGA | + |
|
Preference number: 4 (lower is better) Translates to: RTHTHPCCNWVRELALPLIQPAS*ESRRNG Trigger: TCCGTTTCTCCGAGATTCCCATGAAGCTGGCTGGAT...GAGTGGCAATGCCAGTTCTCTAACCCAGTTACAGCAGGGGTGTGTGTGCGTGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR CCA 90 bp | CTGCCTTCGCTGCTGCACCTGAAGAAGACGACAAAGCAAGCCTCAGGCTTCAGCATCCAGCCAGCTTCATaGGAATCTCGGAGAAACGGA | + |
|
Preference number: 4 (lower is better) Translates to: LPSLLHLKKTTKQASGFSIQPAS*ESRRNG Trigger: TCCGTTTCTCCGAGATTCCCATGAAGCTGGCTGGAT...GCTGAAGCCTGAGGCTTGCTTTGTCGTCTTCTTCAGGTGCAGCAGCGAAGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140255.3 |
||
| CDS-3UTR CCA 90 bp | GGCACTGGCCCTAGGGTGGAGCCTGTAAACATGCAAACCCAGCAGCCTTTGGTTCATCTGGGCCTTCAGTaGGTCATCAACCTCTACATC | + |
|
Preference number: 4 (lower is better) Translates to: GTGPRVEPVNMQTQQPLVHLGLQ*VINLYI Trigger: GATGTAGAGGTTGATGACCCACTGAAGGCCCAGATG...AACCAAAGGCTGCTGGGTTTGCATGTTTACAGGCTCCACCCTAGGGCCAGTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR CCA 90 bp | TGTAACTGGGTTAGAGAACTGGCATTGCCACTCTCAGGAGATTCCACCTCCCCCGAAGCAATCTCCTGCTaGTTGGTGGTAGAGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CNWVRELALPLSGDSTSPEAISC*LVVEAR Trigger: CCTGGCCTCTACCACCAACCAGCAGGAGATTGCTTC...GGGGGAGGTGGAATCTCCTGAGAGTGGCAATGCCAGTTCTCTAACCCAGTTACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR CCA 90 bp | GAGGCAATCCCTGAGCAGTTAGGTCAGGCGAATTCCCAGCACCTGTTCCAGTTCAAGCGGAGGCCAAAATaGCAAAGCCTCACCTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EAIPEQLGQANSQHLFQFKRRPK*QSLTLA Trigger: TGCCAAGGTGAGGCTTTGCCATTTTGGCCTCCGCTT...GAACTGGAACAGGTGCTGGGAATTCGCCTGACCTAACTGCTCAGGGATTGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140255.3 |
||
| CDS-3UTR TCA 90 bp | TGTAACTGGGTTAGAGAACTGGCATTGCCACTCTCAGGAGATTCCACCTCCCCCGCGTCAGAGGCTTCTTaGTGGCCTCTTGAATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CNWVRELALPLSGDSTSPASEAS*WPLESP Trigger: TGGAGATTCAAGAGGCCATCAAGAAGCCTCTGACGC...GGGGGAGGTGGAATCTCCTGAGAGTGGCAATGCCAGTTCTCTAACCCAGTTACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR GCA 90 bp | ACTTTGGTTAGAAAGGCCAGGAAGAGTCTAGGGCCTTCTCTTCCTTGCCCAGCTATGGGGTCTGGATGCTaGAGCAATCCAGCCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TLVRKARKSLGPSLPCPAMGSGC*SNPASF Trigger: GAAGCTGGCTGGATTGCTGCAGCATCCAGACCCCAT...AGCTGGGCAAGGAAGAGAAGGCCCTAGACTCTTCCTGGCCTTTCTAACCAAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR CCA 90 bp | CCTGCTGTAACTGGGTTAGAGAACTGGCATTGCCACTCTCAGGAGATTCCACCTGTATGCCTGAGACTCTaGGACAAGCTCCCGGATTCG | + |
|
Preference number: 4 (lower is better) Translates to: PAVTGLENWHCHSQEIPPVCLRL*DKLPDS Trigger: CGAATCCGGGAGCTTGTCCCAGAGTCTCAGGCATAC...AGGTGGAATCTCCTGAGAGTGGCAATGCCAGTTCTCTAACCCAGTTACAGCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR CCA 90 bp | ACGCACACACACCCCTGCTGTAACTGGGTTAGAGAACTGGCATTGCCACTCTCATTGCGAGCGATGGTCTaGTCCAGCTTCCTCTCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: THTHPCCNWVRELALPLSLRAMV*SSFLSK Trigger: TTTCGAGAGGAAGCTGGACCAGACCATCGCTCGCAA...TGAGAGTGGCAATGCCAGTTCTCTAACCCAGTTACAGCAGGGGTGTGTGTGCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR CCA 90 bp | GCCTTCGCTGCTGCACCTGAAGAAGACGACAAAGCAAGCCTCAGGCTTCAGCTTGACATTGAGATCTCCTaGCCGTTTCACCTGAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: AFAAAPEEDDKASLRLQLDIEIS*PFHLKA Trigger: GGCTTTCAGGTGAAACGGCCAGGAGATCTCAATGTC...AAGCTGAAGCCTGAGGCTTGCTTTGTCGTCTTCTTCAGGTGCAGCAGCGAAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140255.3 |
||
| CDS-3UTR CCA 90 bp | AGGAAGGAGGCAATCCCTGAGCAGTTAGGTCAGGCGAATTCCCAGCACCTGTTCCATCTGGGCCTTCAGTaGGTCATCAACCTCTACATC | + |
|
Preference number: 4 (lower is better) Translates to: RKEAIPEQLGQANSQHLFHLGLQ*VINLYI Trigger: GATGTAGAGGTTGATGACCCACTGAAGGCCCAGATG...GAACAGGTGCTGGGAATTCGCCTGACCTAACTGCTCAGGGATTGCCTCCTTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140255.3 |
||
| CDS-3UTR CCA 90 bp | CAGCACCTGTTCCAGTTCCTGCCTTCGCTGCTGCACCTGAAGAAGACGACAAAGAGGAAGTTGCTCATCTaGGCCTTCAGTGGGTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: QHLFQFLPSLLHLKKTTKRKLLI*AFSGSS Trigger: TGATGACCCACTGAAGGCCCAGATGAGCAACTTCCT...CTTTGTCGTCTTCTTCAGGTGCAGCAGCGAAGGCAGGAACTGGAACAGGTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140255.3 |
||
| CDS-3UTR CCA 90 bp | GGCATTGCCACTCTCAGGAGATTCCACCTCCCCCTGCCCAAGCAGCTATGGGTGGACTCAATGGTCTCATaGATCTTGACGTCAAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GIATLRRFHLPLPKQLWVDSMVS*ILTSRE Trigger: TTCTCTTGACGTCAAGATCCATGAGACCATTGAGTC...CACCCATAGCTGCTTGGGCAGGGGGAGGTGGAATCTCCTGAGAGTGGCAATGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR CCA 90 bp | ACTTTGGTTAGAAAGGCCAGGAAGAGTCTAGGGCCTTCTCTTCCTTGCCCAGCTTCCTGGATGAAGTCCTaGGGCTCGGTGCTAAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TLVRKARKSLGPSLPCPASWMKS*GSVLKL Trigger: CAGCTTTAGCACCGAGCCCCAGGACTTCATCCAGGA...AGCTGGGCAAGGAAGAGAAGGCCCTAGACTCTTCCTGGCCTTTCTAACCAAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR CCA 90 bp | ACTTTGGTTAGAAAGGCCAGGAAGAGTCTAGGGCCTTCTCTTCCTTGCCCAGCTTTCGCTGCTGCACCTTaGCAAAGATGTGCCTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TLVRKARKSLGPSLPCPAFAAAP*QRCASP Trigger: TGGGGAGGCACATCTTTGCCAAGGTGCAGCAGCGAA...AGCTGGGCAAGGAAGAGAAGGCCCTAGACTCTTCCTGGCCTTTCTAACCAAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR TCA 90 bp | AATTTTCCAAGTTTGCCAAGCCTTAGGCCCATCCTCTTTAAGACCGACTGCAAAGCCACAGTGCCTGCATaGTTGCCGCCCTGGTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: NFPSLPSLRPILFKTDCKATVPA*LPPWSV Trigger: CACAGACCAGGGCGGCAATCATGCAGGCACTGTGGC...TTTGCAGTCGGTCTTAAAGAGGATGGGCCTAAGGCTTGGCAAACTTGGAAAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR TCA 90 bp | GAGGCAATCCCTGAGCAGTTAGGTCAGGCGAATTCCCAGCACCTGTTCCAGTTCGGGTCTTTAGCTGGTTaGTGGACTCAATGGTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: EAIPEQLGQANSQHLFQFGSLAG*WTQWSH Trigger: ATGAGACCATTGAGTCCATCAACCAGCTAAAGACCC...GAACTGGAACAGGTGCTGGGAATTCGCCTGACCTAACTGCTCAGGGATTGCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140255.3 |
||
| CDS-3UTR GCA 90 bp | CGCACGCACACACACCCCTGCTGTAACTGGGTTAGAGAACTGGCATTGCCACTCCGAAGTTTTCGCTTTTaGGTCAGAGGCTTCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: RTHTHPCCNWVRELALPLRSFRF*VRGFLM Trigger: CATCAAGAAGCCTCTGACGCAAAAGCGAAAACTTCG...GAGTGGCAATGCCAGTTCTCTAACCCAGTTACAGCAGGGGTGTGTGTGCGTGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR GCA 90 bp | GCCAGCGCTAAAAGGTCAGTAATAAGGCTTTGGGAACCAAGCAGTGAGGGATCTCGCTCATGGCCGTCCTaGAGCTGGTTGTGTTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: ASAKRSVIRLWEPSSEGSRSWPS*SWLCLM Trigger: CATCAAACACAACCAGCTGCAGGACGGCCATGAGCG...AGATCCCTCACTGCTTGGTTCCCAAAGCCTTATTACTGACCTTTTAGCGCTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGGCCGCTCATTGCAAACCCAATTAAAGCCAGCGCTAAAAGGTCAGTAATACCTGCAAGCCAGCCATaGGCATCCTGCTTCCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LRPLIANPIKASAKRSVIPASQP*ASCFLV Trigger: CACCAGGAAGCAGGATGCCCATGGCTGGCTTGCAGG...TATTACTGACCTTTTAGCGCTGGCTTTAATTGGGTTTGCAATGAGCGGCCTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR CCA 90 bp | TCTTTAAGACCGACTGCAAAAGGTAACAGCAGTCCTCCAGCTTTCCCCTTCCCCTTGCGAGCGATGGTCTaGTCCAGCTTCCTCTCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SLRPTAKGNSSPPAFPFPLRAMV*SSFLSK Trigger: TTTCGAGAGGAAGCTGGACCAGACCATCGCTCGCAA...GGGGAAGGGGAAAGCTGGAGGACTGCTGTTACCTTTTGCAGTCGGTCTTAAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR CCA 90 bp | GCCAGCGCTAAAAGGTCAGTAATAAGGCTTTGGGAACCAAGCAGTGAGGGATCTCTGTTTCCTGTGTGGTaGGCATCCGATGCCACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ASAKRSVIRLWEPSSEGSLFPVW*ASDATP Trigger: TGGAGTGGCATCGGATGCCCACCACACAGGAAACAG...AGATCCCTCACTGCTTGGTTCCCAAAGCCTTATTACTGACCTTTTAGCGCTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR CCA 90 bp | CAGCACCTGTTCCAGTTCCTGCCTTCGCTGCTGCACCTGAAGAAGACGACAAAGAATAACAATGGGGTCTaGATGCTGCAGCAATCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QHLFQFLPSLLHLKKTTKNNNGV*MLQQSS Trigger: GCTGGATTGCTGCAGCATCCAGACCCCATTGTTATT...CTTTGTCGTCTTCTTCAGGTGCAGCAGCGAAGGCAGGAACTGGAACAGGTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140255.3 |
||
| CDS-3UTR CCA 90 bp | TCTTTAAGACCGACTGCAAAAGGTAACAGCAGTCCTCCAGCTTTCCCCTTCCCCAGGAAAGTGGAACAGTaGAGGGACACAGGTCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLRPTAKGNSSPPAFPFPRKVEQ*RDTGQW Trigger: CCACTGACCTGTGTCCCTCCACTGTTCCACTTTCCT...GGGGAAGGGGAAAGCTGGAGGACTGCTGTTACCTTTTGCAGTCGGTCTTAAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106843.8 |
||
| CDS-3UTR TCA 90 bp | GCCAGCGCTAAAAGGTCAGTAATAAGGCTTTGGGAACCAAGCAGTGAGGGATCTAGATCCATGTATGCCTaGGACTCTGGGACAAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ASAKRSVIRLWEPSSEGSRSMYA*DSGTSS Trigger: GGAGCTTGTCCCAGAGTCTCAGGCATACATGGATCT...AGATCCCTCACTGCTTGGTTCCCAAAGCCTTATTACTGACCTTTTAGCGCTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR TCA 90 bp | TCTTTAAGACCGACTGCAAAAGGTAACAGCAGTCCTCCAGCTTTCCCCTTCCCCTTCTTGATGGCCTCTTaGATCTCCATCCGCTTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: SLRPTAKGNSSPPAFPFPFLMAS*ISIRLR Trigger: TCGCAAGCGGATGGAGATTCAAGAGGCCATCAAGAA...GGGGAAGGGGAAAGCTGGAGGACTGCTGTTACCTTTTGCAGTCGGTCTTAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR TCA 90 bp | CTGGCATTGCCACTCTCAGGAGATTCCACCTCCCCCTGCCCAAGCAGCTATGGGTCCACACTAATGACATaGTTAATAACAATGGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LALPLSGDSTSPCPSSYGSTLMT*LITMGS Trigger: AGACCCCATTGTTATTAATCATGTCATTAGTGTGGA...CCCATAGCTGCTTGGGCAGGGGGAGGTGGAATCTCCTGAGAGTGGCAATGCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR GCA 90 bp | GCCAGCGCTAAAAGGTCAGTAATAAGGCTTTGGGAACCAAGCAGTGAGGGATCTAGTTCCTGCCTTCGCTaGTGCACCTTGGCAAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: ASAKRSVIRLWEPSSEGSSSCLR*CTLAKM Trigger: CATCTTTGCCAAGGTGCAGCAGCGAAGGCAGGAACT...AGATCCCTCACTGCTTGGTTCCCAAAGCCTTATTACTGACCTTTTAGCGCTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR CCA 90 bp | CGCACGCACACACACCCCTGCTGTAACTGGGTTAGAGAACTGGCATTGCCACTCCAGGCTGTCTTCTTTTaGTCATTAGGATCCACACTA | + |
|
Preference number: 4 (lower is better) Translates to: RTHTHPCCNWVRELALPLQAVFF*SLGSTL Trigger: TAGTGTGGATCCTAATGACCAAAAGAAGACAGCCTG...GAGTGGCAATGCCAGTTCTCTAACCCAGTTACAGCAGGGGTGTGTGTGCGTGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR CCA 90 bp | ACTTTGGTTAGAAAGGCCAGGAAGAGTCTAGGGCCTTCTCTTCCTTGCCCAGCTCATCTGGGCCTTCAGTaGGTCATCAACCTCTACATC | + |
|
Preference number: 4 (lower is better) Translates to: TLVRKARKSLGPSLPCPAHLGLQ*VINLYI Trigger: GATGTAGAGGTTGATGACCCACTGAAGGCCCAGATG...AGCTGGGCAAGGAAGAGAAGGCCCTAGACTCTTCCTGGCCTTTCTAACCAAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR CCA 90 bp | AAACCTGCTCCCCAAATAGTGCAAATACCCAAAAAGAAGGACAAACCAGCAGCAGAACGGAGCCACTCCTaGATGAAGTCCTGGGGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: KPAPQIVQIPKKKDKPAAERSHS*MKSWGS Trigger: CGAGCCCCAGGACTTCATCCAGGAGTGGCTCCGTTC...TGCTGCTGGTTTGTCCTTCTTTTTGGGTATTTGCACTATTTGGGGAGCAGGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR CCA 90 bp | AATTTTCCAAGTTTGCCAAGCCTTAGGCCCATCCTCTTTAAGACCGACTGCAAATTGAGGTCTCGGCGTTaGGAACGGAGCCACTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NFPSLPSLRPILFKTDCKLRSRR*ERSHSW Trigger: CCAGGAGTGGCTCCGTTCCCAACGCCGAGACCTCAA...TTTGCAGTCGGTCTTAAAGAGGATGGGCCTAAGGCTTGGCAAACTTGGAAAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR TCA 90 bp | CTGAGGCCGCTCATTGCAAACCCAATTAAAGCCAGCGCTAAAAGGTCAGTAATAAGCTCCCGGATTCGCTaGGGTAGAACCTTATCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LRPLIANPIKASAKRSVISSRIR*GRTLSA Trigger: GGCAGATAAGGTTCTACCTCAGCGAATCCGGGAGCT...TATTACTGACCTTTTAGCGCTGGCTTTAATTGGGTTTGCAATGAGCGGCCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR TCA 90 bp | TCTTTAAGACCGACTGCAAAAGGTAACAGCAGTCCTCCAGCTTTCCCCTTCCCCCCGCCTTGCTGGGGCTaGATGTATTGGAAATATAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLRPTAKGNSSPPAFPFPPPCWG*MYWKYR Trigger: TCTATATTTCCAATACATTCAGCCCCAGCAAGGCGG...GGGGAAGGGGAAAGCTGGAGGACTGCTGTTACCTTTTGCAGTCGGTCTTAAAGA 50% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR TCA 90 bp | CTGAGGCCGCTCATTGCAAACCCAATTAAAGCCAGCGCTAAAAGGTCAGTAATAGGAGTCGGCCACAACTaGAGATCTGGCGGAAGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: LRPLIANPIKASAKRSVIGVGHN*RSGGSN Trigger: GTTACTTCCGCCAGATCTTCAGTTGTGGCCGACTCC...TATTACTGACCTTTTAGCGCTGGCTTTAATTGGGTTTGCAATGAGCGGCCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR TCA 90 bp | TCTTTAAGACCGACTGCAAAAGGTAACAGCAGTCCTCCAGCTTTCCCCTTCCCCGGGTCTTTAGCTGGTTaGTGGACTCAATGGTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SLRPTAKGNSSPPAFPFPGSLAG*WTQWSH Trigger: ATGAGACCATTGAGTCCATCAACCAGCTAAAGACCC...GGGGAAGGGGAAAGCTGGAGGACTGCTGTTACCTTTTGCAGTCGGTCTTAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR CCA 90 bp | AAACCTGCTCCCCAAATAGTGCAAATACCCAAAAAGAAGGACAAACCAGCAGCATCCGCTTGCGAGCGATaGTCTGGTCCAGCTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KPAPQIVQIPKKKDKPAASACER*SGPASS Trigger: AGAGGAAGCTGGACCAGACCATCGCTCGCAAGCGGA...TGCTGCTGGTTTGTCCTTCTTTTTGGGTATTTGCACTATTTGGGGAGCAGGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
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| CDS-3UTR CCA 90 bp | CCTGCTGTAACTGGGTTAGAGAACTGGCATTGCCACTCTCAGGAGATTCCACCTAATAACAATGGGGTCTaGATGCTGCAGCAATCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PAVTGLENWHCHSQEIPPNNNGV*MLQQSS Trigger: GCTGGATTGCTGCAGCATCCAGACCCCATTGTTATT...AGGTGGAATCTCCTGAGAGTGGCAATGCCAGTTCTCTAACCCAGTTACAGCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR CCA 90 bp | GCCTTCGCTGCTGCACCTGAAGAAGACGACAAAGCAAGCCTCAGGCTTCAGCTTCAGGCTGTCTTCTTTTaGTCATTAGGATCCACACTA | + |
|
Preference number: 4 (lower is better) Translates to: AFAAAPEEDDKASLRLQLQAVFF*SLGSTL Trigger: TAGTGTGGATCCTAATGACCAAAAGAAGACAGCCTG...AAGCTGAAGCCTGAGGCTTGCTTTGTCGTCTTCTTCAGGTGCAGCAGCGAAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140255.3 |
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| CDS-3UTR CCA 90 bp | GCCTTCGCTGCTGCACCTGAAGAAGACGACAAAGCAAGCCTCAGGCTTCAGCTTGACTCAATGGTCTCATaGATCTTGACGTCAAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: AFAAAPEEDDKASLRLQLDSMVS*ILTSRE Trigger: TTCTCTTGACGTCAAGATCCATGAGACCATTGAGTC...AAGCTGAAGCCTGAGGCTTGCTTTGTCGTCTTCTTCAGGTGCAGCAGCGAAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140255.3 |
||
| CDS-3UTR CCA 90 bp | CTGAGGCCGCTCATTGCAAACCCAATTAAAGCCAGCGCTAAAAGGTCAGTAATATCCTGGATGAAGTCCTaGGGCTCGGTGCTAAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LRPLIANPIKASAKRSVISWMKS*GSVLKL Trigger: CAGCTTTAGCACCGAGCCCCAGGACTTCATCCAGGA...TATTACTGACCTTTTAGCGCTGGCTTTAATTGGGTTTGCAATGAGCGGCCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR GCA 90 bp | CTGAGGCCGCTCATTGCAAACCCAATTAAAGCCAGCGCTAAAAGGTCAGTAATAAGAGAAGCAATCTCCTaGTGGTTGGTGGTAGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LRPLIANPIKASAKRSVIREAIS*WLVVEA Trigger: GGCCTCTACCACCAACCAGCAGGAGATTGCTTCTCT...TATTACTGACCTTTTAGCGCTGGCTTTAATTGGGTTTGCAATGAGCGGCCTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR TCA 90 bp | AAACCTGCTCCCCAAATAGTGCAAATACCCAAAAAGAAGGACAAACCAGCAGCAAGATCCATGTATGCCTaGGACTCTGGGACAAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KPAPQIVQIPKKKDKPAARSMYA*DSGTSS Trigger: GGAGCTTGTCCCAGAGTCTCAGGCATACATGGATCT...TGCTGCTGGTTTGTCCTTCTTTTTGGGTATTTGCACTATTTGGGGAGCAGGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR TCA 90 bp | AAACCTGCTCCCCAAATAGTGCAAATACCCAAAAAGAAGGACAAACCAGCAGCAGCGTCAGAGGCTTCTTaGTGGCCTCTTGAATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KPAPQIVQIPKKKDKPAAASEAS*WPLESP Trigger: TGGAGATTCAAGAGGCCATCAAGAAGCCTCTGACGC...TGCTGCTGGTTTGTCCTTCTTTTTGGGTATTTGCACTATTTGGGGAGCAGGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR TCA 90 bp | GCCTTCGCTGCTGCACCTGAAGAAGACGACAAAGCAAGCCTCAGGCTTCAGCTTTCCACACTAATGACATaGTTAATAACAATGGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: AFAAAPEEDDKASLRLQLSTLMT*LITMGS Trigger: AGACCCCATTGTTATTAATCATGTCATTAGTGTGGA...AAGCTGAAGCCTGAGGCTTGCTTTGTCGTCTTCTTCAGGTGCAGCAGCGAAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140255.3 |
||
| CDS-3UTR CCA 90 bp | CTGAGGCCGCTCATTGCAAACCCAATTAAAGCCAGCGCTAAAAGGTCAGTAATAATCCAGCCAGCTTCATaGGAATCTCGGAGAAACGGA | + |
|
Preference number: 4 (lower is better) Translates to: LRPLIANPIKASAKRSVIIQPAS*ESRRNG Trigger: TCCGTTTCTCCGAGATTCCCATGAAGCTGGCTGGAT...TATTACTGACCTTTTAGCGCTGGCTTTAATTGGGTTTGCAATGAGCGGCCTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR CCA 90 bp | ACTTTGGTTAGAAAGGCCAGGAAGAGTCTAGGGCCTTCTCTTCCTTGCCCAGCTGACTCAATGGTCTCATaGATCTTGACGTCAAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TLVRKARKSLGPSLPCPADSMVS*ILTSRE Trigger: TTCTCTTGACGTCAAGATCCATGAGACCATTGAGTC...AGCTGGGCAAGGAAGAGAAGGCCCTAGACTCTTCCTGGCCTTTCTAACCAAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR CCA 90 bp | GCCAGCGCTAAAAGGTCAGTAATAAGGCTTTGGGAACCAAGCAGTGAGGGATCTCAGGCTGTCTTCTTTTaGTCATTAGGATCCACACTA | + |
|
Preference number: 4 (lower is better) Translates to: ASAKRSVIRLWEPSSEGSQAVFF*SLGSTL Trigger: TAGTGTGGATCCTAATGACCAAAAGAAGACAGCCTG...AGATCCCTCACTGCTTGGTTCCCAAAGCCTTATTACTGACCTTTTAGCGCTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR CCA 90 bp | AAACCTGCTCCCCAAATAGTGCAAATACCCAAAAAGAAGGACAAACCAGCAGCAAGGAAGTTGCTCATCTaGGCCTTCAGTGGGTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: KPAPQIVQIPKKKDKPAARKLLI*AFSGSS Trigger: TGATGACCCACTGAAGGCCCAGATGAGCAACTTCCT...TGCTGCTGGTTTGTCCTTCTTTTTGGGTATTTGCACTATTTGGGGAGCAGGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR CCA 90 bp | AATTTTCCAAGTTTGCCAAGCCTTAGGCCCATCCTCTTTAAGACCGACTGCAAAAGGAAGTTGCTCATCTaGGCCTTCAGTGGGTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: NFPSLPSLRPILFKTDCKRKLLI*AFSGSS Trigger: TGATGACCCACTGAAGGCCCAGATGAGCAACTTCCT...TTTGCAGTCGGTCTTAAAGAGGATGGGCCTAAGGCTTGGCAAACTTGGAAAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR TCA 90 bp | CTGAGGCCGCTCATTGCAAACCCAATTAAAGCCAGCGCTAAAAGGTCAGTAATATCCACACTAATGACATaGTTAATAACAATGGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LRPLIANPIKASAKRSVISTLMT*LITMGS Trigger: AGACCCCATTGTTATTAATCATGTCATTAGTGTGGA...TATTACTGACCTTTTAGCGCTGGCTTTAATTGGGTTTGCAATGAGCGGCCTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS GCA 90 bp | GGGAACCGGCAGGAGGTCCCACCTGCAAGCCAGCCATGGGCATCCTaGTTCCTGGTGACATGCCAGGACGCTGGTACTGCGCCGCGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GNRQEVPPASQPWAS*FLVTCQDAGTAPRG Trigger: GCCCCGCGGCGCAGTACCAGCGTCCTGGCATGTCACCAGGAAGCAGGATGCCCATGGCTGGCTTGCAGGTGGGACCTCCTGCCGGTTCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021052.16 |
||
| CDS CCA 90 bp | CATGGTAGGTGGCATGCCAGGTCGGAGCGGAGCAGCTGTGCCAAATaGGGAACCGGCAGGAGGTCCCACCTGCAAGCCAGCCATGGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: HGRWHARSERSSCAK*GTGRRSHLQASHGH Trigger: ATGCCCATGGCTGGCTTGCAGGTGGGACCTCCTGCCGGTTCCCCATTTGGCACAGCTGCTCCGCTCCGACCTGGCATGCCACCTACCATG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS CCA 90 bp | TGCCAAATGGGGAACCGGCAGGAGGTCCCACCTGCAAGCCAGCCATaGGCATCCTGCTTCCTGGTGACATGCCAGGACGCTGGTACTGCG | + |
|
Preference number: 5 (lower is better) Translates to: CQMGNRQEVPPASQP*ASCFLVTCQDAGTA Trigger: CGCAGTACCAGCGTCCTGGCATGTCACCAGGAAGCAGGATGCCCATGGCTGGCTTGCAGGTGGGACCTCCTGCCGGTTCCCCATTTGGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021052.16 |
||
| CDS CCA 90 bp | AGGCATCGGGGGCTGGGCCTGAGGCACAAGCAGGCGTTTTCGGAATaGATCCATCATGGTAGGTGGCATGCCAGGTCGGAGCGGAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RHRGLGLRHKQAFSE*IHHGRWHARSERSS Trigger: GCTGCTCCGCTCCGACCTGGCATGCCACCTACCATGATGGATCCATTCCGAAAACGCCTGCTTGTGCCTCAGGCCCAGCCCCCGATGCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS GCA 90 bp | GGGAACCGGCAGGAGGTCCCACCTGCAAGCCAGCCATGGGCATCCTaGTTCCTGGTGACATGCCAGGACGCTGAGGAAAGTGGAACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: GNRQEVPPASQPWAS*FLVTCQDAEESGTV Trigger: CACTGTTCCACTTTCCTCAGCGTCCTGGCATGTCACCAGGAAGCAGGATGCCCATGGCTGGCTTGCAGGTGGGACCTCCTGCCGGTTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106843.8 |
||
| CDS TCA 90 bp | CTCCTCTTTAACCCTCGGCGCTGGGCAGGCATCGGGGGCTGGGCCTaGGGCACAAGCAGGCGTTTTCGGAATGGATCCATCATGGTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LLFNPRRWAGIGGWA*GTSRRFRNGSIMVG Trigger: ACCTACCATGATGGATCCATTCCGAAAACGCCTGCTTGTGCCTCAGGCCCAGCCCCCGATGCCTGCCCAGCGCCGAGGGTTAAAGAGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS TCA 90 bp | AGGAGGTCCCACCTGCAAGCCAGCCATGGGCATCCTGCTTCCTGGTaGCATGCCAGGACGCTGAGGAAAGTGGAACAGTGGAGGGACACA | + |
|
Preference number: 5 (lower is better) Translates to: RRSHLQASHGHPASW*HARTLRKVEQWRDT Trigger: TGTGTCCCTCCACTGTTCCACTTTCCTCAGCGTCCTGGCATGTCACCAGGAAGCAGGATGCCCATGGCTGGCTTGCAGGTGGGACCTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106843.8 |
||
| CDS GCA 90 bp | GTCCCACCTGCAAGCCAGCCATGGGCATCCTGCTTCCTGGTGACATaGCAGGACGCTGAGGAAAGTGGAACAGTGGAGGGACACAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: VPPASQPWASCFLVT*QDAEESGTVEGHRS Trigger: TGACCTGTGTCCCTCCACTGTTCCACTTTCCTCAGCGTCCTGGCATGTCACCAGGAAGCAGGATGCCCATGGCTGGCTTGCAGGTGGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106843.8 |
||
| CDS-3UTR CAA 90 bp | CTGGCATTGCCACTCTCAGGAGATTCCACCTCCCCCTGCCCAAGCAGCTATGGGGCAATCTCCTGCTGGTaGGTGGTAGAGGCCAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LALPLSGDSTSPCPSSYGAISCW*VVEARK Trigger: CTTCCTGGCCTCTACCACCAACCAGCAGGAGATTGC...CCCATAGCTGCTTGGGCAGGGGGAGGTGGAATCTCCTGAGAGTGGCAATGCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR CAA 90 bp | CCTGCCTTCGCTGCTGCACCTGAAGAAGACGACAAAGCAAGCCTCAGGCTTCAGCTTGAGGTCTCGGCGTaGGGAACGGAGCCACTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PAFAAAPEEDDKASLRLQLEVSA*GTEPLL Trigger: CAGGAGTGGCTCCGTTCCCAACGCCGAGACCTCAAG...CTGAAGCCTGAGGCTTGCTTTGTCGTCTTCTTCAGGTGCAGCAGCGAAGGCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140255.3 |
||
| CDS CCA 90 bp | CTGAGGCACAAGCAGGCGTTTTCGGAATGGATCCATCATGGTAGGTaGCATGCCAGGTCGGAGCGGAGCAGCTGTGCCAAATGGGGAACC | + |
|
Preference number: 5 (lower is better) Translates to: LRHKQAFSEWIHHGR*HARSERSSCAKWGT Trigger: GGTTCCCCATTTGGCACAGCTGCTCCGCTCCGACCTGGCATGCCACCTACCATGATGGATCCATTCCGAAAACGCCTGCTTGTGCCTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR CAA 90 bp | ACTTTGGTTAGAAAGGCCAGGAAGAGTCTAGGGCCTTCTCTTCCTTGCCCAGCTTCCCAGGAGGCCACCTaGTCTGCTGCCGGGGTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: TLVRKARKSLGPSLPCPASQEAT*SAAGVP Trigger: GGGAACCCCGGCAGCAGACAAGGTGGCCTCCTGGGA...AGCTGGGCAAGGAAGAGAAGGCCCTAGACTCTTCCTGGCCTTTCTAACCAAAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR CAA 90 bp | GGCACTGGCCCTAGGGTGGAGCCTGTAAACATGCAAACCCAGCAGCCTTTGGTTCTTCGCTGCTGCACCTaGGCAAAGATGTGCCTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: GTGPRVEPVNMQTQQPLVLRCCT*AKMCLP Trigger: GGGGAGGCACATCTTTGCCAAGGTGCAGCAGCGAAG...AACCAAAGGCTGCTGGGTTTGCATGTTTACAGGCTCCACCCTAGGGCCAGTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR CAA 90 bp | GGCATTGCCACTCTCAGGAGATTCCACCTCCCCCTGCCCAAGCAGCTATGGGTGCTTCTTGATGGCCTCTaGAATCTCCATCCGCTTGCG | + |
|
Preference number: 5 (lower is better) Translates to: GIATLRRFHLPLPKQLWVLLDGL*NLHPLA Trigger: CGCAAGCGGATGGAGATTCAAGAGGCCATCAAGAAG...CACCCATAGCTGCTTGGGCAGGGGGAGGTGGAATCTCCTGAGAGTGGCAATGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR CAA 90 bp | TGTAACTGGGTTAGAGAACTGGCATTGCCACTCTCAGGAGATTCCACCTCCCCCCTTGAGGTCTCGGCGTaGGGAACGGAGCCACTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: CNWVRELALPLSGDSTSPLEVSA*GTEPLL Trigger: CAGGAGTGGCTCCGTTCCCAACGCCGAGACCTCAAG...GGGGGAGGTGGAATCTCCTGAGAGTGGCAATGCCAGTTCTCTAACCCAGTTACA 58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS CCA 90 bp | TTGAGGTCTCGGCGTTGGGAACGGAGCCACTCCTGGATGAAGTCCTaGGGCTCGGTGCTAAAGCTGAGCATGAAATCCCTCTGGGTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LRSRRWERSHSWMKS*GSVLKLSMKSLWVF Trigger: AAAGACCCAGAGGGATTTCATGCTCAGCTTTAGCACCGAGCCCCAGGACTTCATCCAGGAGTGGCTCCGTTCCCAACGCCGAGACCTCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 ENSMUST00000140255.3 |
||
| CDS-3UTR CAA 90 bp | AGGAAGGAGGCAATCCCTGAGCAGTTAGGTCAGGCGAATTCCCAGCACCTGTTCGCAATCTCCTGCTGGTaGGTGGTAGAGGCCAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RKEAIPEQLGQANSQHLFAISCW*VVEARK Trigger: CTTCCTGGCCTCTACCACCAACCAGCAGGAGATTGC...GAACAGGTGCTGGGAATTCGCCTGACCTAACTGCTCAGGGATTGCCTCCTTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140255.3 |
||
| CDS CCA 90 bp | TCTGTGATGATCTTGAGGTCTCGGCGTTGGGAACGGAGCCACTCCTaGATGAAGTCCTGGGGCTCGGTGCTAAAGCTGAGCATGAAATCC | + |
|
Preference number: 5 (lower is better) Translates to: SVMILRSRRWERSHS*MKSWGSVLKLSMKS Trigger: GGATTTCATGCTCAGCTTTAGCACCGAGCCCCAGGACTTCATCCAGGAGTGGCTCCGTTCCCAACGCCGAGACCTCAAGATCATCACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 ENSMUST00000140255.3 |
||
| CDS-3UTR CAA 90 bp | GGCACTGGCCCTAGGGTGGAGCCTGTAAACATGCAAACCCAGCAGCCTTTGGTTAGGGTGCACTTGACATaGAGATCTCCTGGCCGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GTGPRVEPVNMQTQQPLVRVHLT*RSPGRF Trigger: GAAACGGCCAGGAGATCTCAATGTCAAGTGCACCCT...AACCAAAGGCTGCTGGGTTTGCATGTTTACAGGCTCCACCCTAGGGCCAGTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR CAA 90 bp | GCCAGCGCTAAAAGGTCAGTAATAAGGCTTTGGGAACCAAGCAGTGAGGGATCTCTTGAGGTCTCGGCGTaGGGAACGGAGCCACTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: ASAKRSVIRLWEPSSEGSLEVSA*GTEPLL Trigger: CAGGAGTGGCTCCGTTCCCAACGCCGAGACCTCAAG...AGATCCCTCACTGCTTGGTTCCCAAAGCCTTATTACTGACCTTTTAGCGCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR CAA 90 bp | AAACCTGCTCCCCAAATAGTGCAAATACCCAAAAAGAAGGACAAACCAGCAGCATCCCAGGAGGCCACCTaGTCTGCTGCCGGGGTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: KPAPQIVQIPKKKDKPAASQEAT*SAAGVP Trigger: GGGAACCCCGGCAGCAGACAAGGTGGCCTCCTGGGA...TGCTGCTGGTTTGTCCTTCTTTTTGGGTATTTGCACTATTTGGGGAGCAGGTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR CAA 90 bp | AGGAAGGAGGCAATCCCTGAGCAGTTAGGTCAGGCGAATTCCCAGCACCTGTTCAGGGTGCACTTGACATaGAGATCTCCTGGCCGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RKEAIPEQLGQANSQHLFRVHLT*RSPGRF Trigger: GAAACGGCCAGGAGATCTCAATGTCAAGTGCACCCT...GAACAGGTGCTGGGAATTCGCCTGACCTAACTGCTCAGGGATTGCCTCCTTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140255.3 |
||
| CDS-3UTR CAA 90 bp | CCTGCTGTAACTGGGTTAGAGAACTGGCATTGCCACTCTCAGGAGATTCCACCTGCAATCTCCTGCTGGTaGGTGGTAGAGGCCAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PAVTGLENWHCHSQEIPPAISCW*VVEARK Trigger: CTTCCTGGCCTCTACCACCAACCAGCAGGAGATTGC...AGGTGGAATCTCCTGAGAGTGGCAATGCCAGTTCTCTAACCCAGTTACAGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR CAA 90 bp | GCCAGCGCTAAAAGGTCAGTAATAAGGCTTTGGGAACCAAGCAGTGAGGGATCTCTTCGCTGCTGCACCTaGGCAAAGATGTGCCTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: ASAKRSVIRLWEPSSEGSLRCCT*AKMCLP Trigger: GGGGAGGCACATCTTTGCCAAGGTGCAGCAGCGAAG...AGATCCCTCACTGCTTGGTTCCCAAAGCCTTATTACTGACCTTTTAGCGCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR CAA 90 bp | TGTAACTGGGTTAGAGAACTGGCATTGCCACTCTCAGGAGATTCCACCTCCCCCAGGGTGCACTTGACATaGAGATCTCCTGGCCGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: CNWVRELALPLSGDSTSPRVHLT*RSPGRF Trigger: GAAACGGCCAGGAGATCTCAATGTCAAGTGCACCCT...GGGGGAGGTGGAATCTCCTGAGAGTGGCAATGCCAGTTCTCTAACCCAGTTACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR CAA 90 bp | GGCACTGGCCCTAGGGTGGAGCCTGTAAACATGCAAACCCAGCAGCCTTTGGTTGCAGGCTGTCTTCTTTaGGTCATTAGGATCCACACT | + |
|
Preference number: 5 (lower is better) Translates to: GTGPRVEPVNMQTQQPLVAGCLL*VIRIHT Trigger: AGTGTGGATCCTAATGACCAAAAGAAGACAGCCTGC...AACCAAAGGCTGCTGGGTTTGCATGTTTACAGGCTCCACCCTAGGGCCAGTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS GCA 90 bp | GACTCAATGGTCTCATGGATCTTGACGTCAAGAGAAGCAATCTCCTaGTGGTTGGTGGTAGAGGCCAGGAAGTTGCTCATCTGGGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: DSMVSWILTSREAIS*WLVVEARKLLIWAF Trigger: GAAGGCCCAGATGAGCAACTTCCTGGCCTCTACCACCAACCAGCAGGAGATTGCTTCTCTTGACGTCAAGATCCATGAGACCATTGAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 ENSMUST00000140255.3 |
||
| CDS-3UTR CAA 90 bp | ACTTTGGTTAGAAAGGCCAGGAAGAGTCTAGGGCCTTCTCTTCCTTGCCCAGCTCTTCTTGATGGCCTCTaGAATCTCCATCCGCTTGCG | + |
|
Preference number: 5 (lower is better) Translates to: TLVRKARKSLGPSLPCPALLDGL*NLHPLA Trigger: CGCAAGCGGATGGAGATTCAAGAGGCCATCAAGAAG...AGCTGGGCAAGGAAGAGAAGGCCCTAGACTCTTCCTGGCCTTTCTAACCAAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR CAA 90 bp | TGTAACTGGGTTAGAGAACTGGCATTGCCACTCTCAGGAGATTCCACCTCCCCCTTATCTCCATCCGCCTaGCTGGGGCTGAATGTATTG | + |
|
Preference number: 5 (lower is better) Translates to: CNWVRELALPLSGDSTSPLSPSA*LGLNVL Trigger: CAATACATTCAGCCCCAGCAAGGCGGATGGAGATAA...GGGGGAGGTGGAATCTCCTGAGAGTGGCAATGCCAGTTCTCTAACCCAGTTACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR CAA 90 bp | CGCACGCACACACACCCCTGCTGTAACTGGGTTAGAGAACTGGCATTGCCACTCAACTTCCTCTTCTGTTaGCTAGGATCATCCAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: RTHTHPCCNWVRELALPLNFLFC*LGSSSS Trigger: ACTGCTGGATGATCCTAGCAAACAGAAGAGGAAGTT...GAGTGGCAATGCCAGTTCTCTAACCCAGTTACAGCAGGGGTGTGTGTGCGTGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR CAA 90 bp | GCCTTCGCTGCTGCACCTGAAGAAGACGACAAAGCAAGCCTCAGGCTTCAGCTTGCAGGCTGTCTTCTTTaGGTCATTAGGATCCACACT | + |
|
Preference number: 5 (lower is better) Translates to: AFAAAPEEDDKASLRLQLAGCLL*VIRIHT Trigger: AGTGTGGATCCTAATGACCAAAAGAAGACAGCCTGC...AAGCTGAAGCCTGAGGCTTGCTTTGTCGTCTTCTTCAGGTGCAGCAGCGAAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140255.3 |
||
| CDS-3UTR CAA 90 bp | CCTGCTGTAACTGGGTTAGAGAACTGGCATTGCCACTCTCAGGAGATTCCACCTCCGAAGTTTTCGCTTTaGCGTCAGAGGCTTCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: PAVTGLENWHCHSQEIPPPKFSL*RQRLLD Trigger: ATCAAGAAGCCTCTGACGCAAAAGCGAAAACTTCGG...AGGTGGAATCTCCTGAGAGTGGCAATGCCAGTTCTCTAACCCAGTTACAGCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR CAA 90 bp | ACGCACACACACCCCTGCTGTAACTGGGTTAGAGAACTGGCATTGCCACTCTCAAACTTCCTCTTCTGTTaGCTAGGATCATCCAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: THTHPCCNWVRELALPLSNFLFC*LGSSSS Trigger: ACTGCTGGATGATCCTAGCAAACAGAAGAGGAAGTT...TGAGAGTGGCAATGCCAGTTCTCTAACCCAGTTACAGCAGGGGTGTGTGTGCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR CAA 90 bp | CCTGCTGTAACTGGGTTAGAGAACTGGCATTGCCACTCTCAGGAGATTCCACCTGCAGGCTGTCTTCTTTaGGTCATTAGGATCCACACT | + |
|
Preference number: 5 (lower is better) Translates to: PAVTGLENWHCHSQEIPPAGCLL*VIRIHT Trigger: AGTGTGGATCCTAATGACCAAAAGAAGACAGCCTGC...AGGTGGAATCTCCTGAGAGTGGCAATGCCAGTTCTCTAACCCAGTTACAGCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS-3UTR CAA 90 bp | GCCAGCGCTAAAAGGTCAGTAATAAGGCTTTGGGAACCAAGCAGTGAGGGATCTCCGAAGTTTTCGCTTTaGCGTCAGAGGCTTCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: ASAKRSVIRLWEPSSEGSPKFSL*RQRLLD Trigger: ATCAAGAAGCCTCTGACGCAAAAGCGAAAACTTCGG...AGATCCCTCACTGCTTGGTTCCCAAAGCCTTATTACTGACCTTTTAGCGCTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS CCA 90 bp | GTCATTAGGATCCACACTAATGACATGATTAATAACAATGGGGTCTaGATGCTGCAGCAATCCAGCCAGCTTCATGGGAATCTCGGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: VIRIHTNDMINNNGV*MLQQSSQLHGNLGE Trigger: TTCTCCGAGATTCCCATGAAGCTGGCTGGATTGCTGCAGCATCCAGACCCCATTGTTATTAATCATGTCATTAGTGTGGATCCTAATGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 ENSMUST00000140255.3 |
||
| CDS TCA 72 bp | CACCTGCAAGCCAGCCATGGGCATCCTGCTTCCTGGTaGCATGCCAGGACGCTGGTACTGCGCCGCGGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: HLQASHGHPASW*HARTLVLRRGA Trigger: GGCCCCGCGGCGCAGTACCAGCGTCCTGGCATGTCACCAGGAAGCAGGATGCCCATGGCTGGCTTGCAGGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021052.16 |
||
| CDS TCA 72 bp | AACCCTCGGCGCTGGGCAGGCATCGGGGGCTGGGCCTaGGGCACAAGCAGGCGTTTTCGGAATGGATCCATC | + |
|
Preference number: 6 (lower is better) Translates to: NPRRWAGIGGWA*GTSRRFRNGSI Trigger: GATGGATCCATTCCGAAAACGCCTGCTTGTGCCTCAGGCCCAGCCCCCGATGCCTGCCCAGCGCCGAGGGTT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS GCA 72 bp | CAGGAGGTCCCACCTGCAAGCCAGCCATGGGCATCCTaGTTCCTGGTGACATGCCAGGACGCTGGTACTGCG | + |
|
Preference number: 6 (lower is better) Translates to: QEVPPASQPWAS*FLVTCQDAGTA Trigger: CGCAGTACCAGCGTCCTGGCATGTCACCAGGAAGCAGGATGCCCATGGCTGGCTTGCAGGTGGGACCTCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021052.16 |
||
| CDS GCA 72 bp | CAGGAGGTCCCACCTGCAAGCCAGCCATGGGCATCCTaGTTCCTGGTGACATGCCAGGACGCTGAGGAAAGT | + |
|
Preference number: 6 (lower is better) Translates to: QEVPPASQPWAS*FLVTCQDAEES Trigger: ACTTTCCTCAGCGTCCTGGCATGTCACCAGGAAGCAGGATGCCCATGGCTGGCTTGCAGGTGGGACCTCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106843.8 |
||
| CDS CCA 72 bp | GGGCTGGGCCTGAGGCACAAGCAGGCGTTTTCGGAATaGATCCATCATGGTAGGTGGCATGCCAGGTCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GLGLRHKQAFSE*IHHGRWHARSE Trigger: CTCCGACCTGGCATGCCACCTACCATGATGGATCCATTCCGAAAACGCCTGCTTGTGCCTCAGGCCCAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
||
| CDS TCA 72 bp | CACCTGCAAGCCAGCCATGGGCATCCTGCTTCCTGGTaGCATGCCAGGACGCTGAGGAAAGTGGAACAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: HLQASHGHPASW*HARTLRKVEQW Trigger: CCACTGTTCCACTTTCCTCAGCGTCCTGGCATGTCACCAGGAAGCAGGATGCCCATGGCTGGCTTGCAGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106843.8 |
||
| CDS CCA 72 bp | CGGCGTTGGGAACGGAGCCACTCCTGGATGAAGTCCTaGGGCTCGGTGCTAAAGCTGAGCATGAAATCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: RRWERSHSWMKS*GSVLKLSMKSL Trigger: GAGGGATTTCATGCTCAGCTTTAGCACCGAGCCCCAGGACTTCATCCAGGAGTGGCTCCGTTCCCAACGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 ENSMUST00000140255.3 |
||
| CDS CCA 72 bp | ATCTTGAGGTCTCGGCGTTGGGAACGGAGCCACTCCTaGATGAAGTCCTGGGGCTCGGTGCTAAAGCTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: ILRSRRWERSHS*MKSWGSVLKLS Trigger: GCTCAGCTTTAGCACCGAGCCCCAGGACTTCATCCAGGAGTGGCTCCGTTCCCAACGCCGAGACCTCAAGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 ENSMUST00000140255.3 |
||
| CDS CCA 72 bp | CCAATCACATCTGTGATGATCTTGAGGTCTCGGCGTTaGGAACGGAGCCACTCCTGGATGAAGTCCTGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: PITSVMILRSRR*ERSHSWMKSWG Trigger: GCCCCAGGACTTCATCCAGGAGTGGCTCCGTTCCCAACGCCGAGACCTCAAGATCATCACAGATGTGATTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 ENSMUST00000140255.3 |
||
| CDS CAA 72 bp | TCCAATCACATCTGTGATGATCTTGAGGTCTCGGCGTaGGGAACGGAGCCACTCCTGGATGAAGTCCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SNHICDDLEVSA*GTEPLLDEVLG Trigger: CCCCAGGACTTCATCCAGGAGTGGCTCCGTTCCCAACGCCGAGACCTCAAGATCATCACAGATGTGATTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 ENSMUST00000140255.3 |
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| CDS TCA 72 bp | TTTCGCTTTTGCGTCAGAGGCTTCTTGATGGCCTCTTaGATCTCCATCCGCTTGCGAGCGATGGTCTGGTCC | + |
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Preference number: 6 (lower is better) Translates to: FRFCVRGFLMAS*ISIRLRAMVWS Trigger: GGACCAGACCATCGCTCGCAAGCGGATGGAGATTCAAGAGGCCATCAAGAAGCCTCTGACGCAAAAGCGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
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| CDS CAA 90 bp | GATCCGAAGTTTTCGCTTTTGCGTCAGAGGCTTCTTGATGGCCTCTaGAATCTCCATCCGCTTGCGAGCGATGGTCTGGTCCAGCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: DPKFSLLRQRLLDGL*NLHPLASDGLVQLP Trigger: AGGAAGCTGGACCAGACCATCGCTCGCAAGCGGATGGAGATTCAAGAGGCCATCAAGAAGCCTCTGACGCAAAAGCGAAAACTTCGGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
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| CDS CCA 72 bp | TGCTGGTTGGTGGTAGAGGCCAGGAAGTTGCTCATCTaGGCCTTCAGTGGGTCATCAACCTCTACATCAATG | + |
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Preference number: 6 (lower is better) Translates to: CWLVVEARKLLI*AFSGSSTSTSM Trigger: CATTGATGTAGAGGTTGATGACCCACTGAAGGCCCAGATGAGCAACTTCCTGGCCTCTACCACCAACCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 ENSMUST00000140255.3 |
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| CDS CAA 72 bp | TTTTCGCTTTTGCGTCAGAGGCTTCTTGATGGCCTCTaGAATCTCCATCCGCTTGCGAGCGATGGTCTGGTC | + |
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Preference number: 6 (lower is better) Translates to: FSLLRQRLLDGL*NLHPLASDGLV Trigger: GACCAGACCATCGCTCGCAAGCGGATGGAGATTCAAGAGGCCATCAAGAAGCCTCTGACGCAAAAGCGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
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| CDS TCA 72 bp | AGATCCGAAGTTTTCGCTTTTGCGTCAGAGGCTTCTTaGTGGCCTCTTGAATCTCCATCCGCTTGCGAGCGA | + |
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Preference number: 6 (lower is better) Translates to: RSEVFAFASEAS*WPLESPSACER Trigger: TCGCTCGCAAGCGGATGGAGATTCAAGAGGCCATCAAGAAGCCTCTGACGCAAAAGCGAAAACTTCGGATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
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| CDS GCA 72 bp | GTCTCATGGATCTTGACGTCAAGAGAAGCAATCTCCTaGTGGTTGGTGGTAGAGGCCAGGAAGTTGCTCATC | + |
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Preference number: 6 (lower is better) Translates to: VSWILTSREAIS*WLVVEARKLLI Trigger: GATGAGCAACTTCCTGGCCTCTACCACCAACCAGCAGGAGATTGCTTCTCTTGACGTCAAGATCCATGAGAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 ENSMUST00000140255.3 |
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| CDS CCA 72 bp | TCATGGATCTTGACGTCAAGAGAAGCAATCTCCTGCTaGTTGGTGGTAGAGGCCAGGAAGTTGCTCATCTGG | + |
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Preference number: 6 (lower is better) Translates to: SWILTSREAISC*LVVEARKLLIW Trigger: CCAGATGAGCAACTTCCTGGCCTCTACCACCAACCAGCAGGAGATTGCTTCTCTTGACGTCAAGATCCATGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 ENSMUST00000140255.3 |
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| CDS TCA 72 bp | CAGTTCCCGCATTATCTCCATCCGCCTTGCTGGGGCTaGATGTATTGGAAATATAGATCCGAAGTTTTCGCT | + |
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Preference number: 6 (lower is better) Translates to: QFPHYLHPPCWG*MYWKYRSEVFA Trigger: AGCGAAAACTTCGGATCTATATTTCCAATACATTCAGCCCCAGCAAGGCGGATGGAGATAATGCGGGAACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 |
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| CDS CCA 72 bp | ATCCACACTAATGACATGATTAATAACAATGGGGTCTaGATGCTGCAGCAATCCAGCCAGCTTCATGGGAAT | + |
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Preference number: 6 (lower is better) Translates to: IHTNDMINNNGV*MLQQSSQLHGN Trigger: ATTCCCATGAAGCTGGCTGGATTGCTGCAGCATCCAGACCCCATTGTTATTAATCATGTCATTAGTGTGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 ENSMUST00000140255.3 |
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| CDS TCA 72 bp | GTCTTCTTTTGGTCATTAGGATCCACACTAATGACATaGTTAATAACAATGGGGTCTGGATGCTGCAGCAAT | + |
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Preference number: 6 (lower is better) Translates to: VFFWSLGSTLMT*LITMGSGCCSN Trigger: ATTGCTGCAGCATCCAGACCCCATTGTTATTAATCATGTCATTAGTGTGGATCCTAATGACCAAAAGAAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021052.16 ENSMUST00000106843.8 ENSMUST00000140255.3 |
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