Pregenerated sensors for SMARCD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023018Ensembl transcript IDs: ENSMUST00000023759.6, ENSMUST00000228984.2, ENSMUST00000229236.2, ENSMUST00000229845.2, ENSMUST00000230530.2
Found 156 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCAGCCCTAGGCGCTTTTACTCCTCAGTGCCCGGGAAGCCACCAGTaGGATTCAACTGGGCAGACATGGGACAGGAAGACAGGGATGGCC | + |
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Preference number: 1 (lower is better) Translates to: PALGAFTPQCPGSHQ*DSTGQTWDRKTGMA Trigger: GGCCATCCCTGTCTTCCTGTCCCATGTCTGCCCAGTTGAATCCCACTGGTGGCTTCCCGGGCACTGAGGAGTAAAAGCGCCTAGGGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
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| 3UTR CCA 90 bp | CCCTGTGCCCAGCTGTCTCCCACCCTGCAGTGTTGTCTGCGAGCCTaGGACATGCTAACTCCGGGTGACAAACCTGGAAGAATCGGAGGC | + |
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Preference number: 1 (lower is better) Translates to: PCAQLSPTLQCCLRA*DMLTPGDKPGRIGG Trigger: GCCTCCGATTCTTCCAGGTTTGTCACCCGGAGTTAGCATGTCCCAGGCTCGCAGACAACACTGCAGGGTGGGAGACAGCTGGGCACAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
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| 3UTR TCA 90 bp | GCCAAGTCCCCTGGAATGCCTCAAGCAAGACCAAGACAGGTACACTaGGGCAGGCAGCACAGGGCCCAAGGAATCGGTGCAGCCAGGCTA | + |
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Preference number: 1 (lower is better) Translates to: AKSPGMPQARPRQVH*GRQHRAQGIGAARL Trigger: TAGCCTGGCTGCACCGATTCCTTGGGCCCTGTGCTGCCTGCCTCAGTGTACCTGTCTTGGTCTTGCTTGAGGCATTCCAGGGGACTTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
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| 3UTR GCA 90 bp | CCATTTCAGACCTATTCTCCAGCCCTAGGCGCTTTTACTCCTCAGTaGCCGGGAAGCCACCAGTGGGATTCAACTGGGCAGACATGGGAC | + |
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Preference number: 1 (lower is better) Translates to: PFQTYSPALGAFTPQ*PGSHQWDSTGQTWD Trigger: GTCCCATGTCTGCCCAGTTGAATCCCACTGGTGGCTTCCCGGGCACTGAGGAGTAAAAGCGCCTAGGGCTGGAGAATAGGTCTGAAATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
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| 3UTR TCA 90 bp | CACCCTGCAGTGTTGTCTGCGAGCCTGGGACATGCTAACTCCGGGTaGCAAACCTGGAAGAATCGGAGGCTTCCCTGGAAGATTCAAAGC | + |
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Preference number: 1 (lower is better) Translates to: HPAVLSASLGHANSG*QTWKNRRLPWKIQS Trigger: GCTTTGAATCTTCCAGGGAAGCCTCCGATTCTTCCAGGTTTGTCACCCGGAGTTAGCATGTCCCAGGCTCGCAGACAACACTGCAGGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
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| 3UTR GCA 90 bp | CACCCTCTTCATTGTGACACTGTCCTGAAGCCAAGTCCCCTGGAATaGCTCAAGCAAGACCAAGACAGGTACACTGAGGCAGGCAGCACA | + |
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Preference number: 1 (lower is better) Translates to: HPLHCDTVLKPSPLE*LKQDQDRYTEAGST Trigger: TGTGCTGCCTGCCTCAGTGTACCTGTCTTGGTCTTGCTTGAGGCATTCCAGGGGACTTGGCTTCAGGACAGTGTCACAATGAAGAGGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
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| 3UTR TCA 90 bp | GGGAGTGTGTGGGAGGGAGCAACAATTCAACACACACTCCAATACTaGCATGGACCCCTAAGGGGTCAGAGGACACTGAGACAGCAGGTT | + |
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Preference number: 1 (lower is better) Translates to: GSVWEGATIQHTLQY*HGPLRGQRTLRQQV Trigger: AACCTGCTGTCTCAGTGTCCTCTGACCCCTTAGGGGTCCATGTCAGTATTGGAGTGTGTGTTGAATTGTTGCTCCCTCCCACACACTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
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| 3UTR TCA 90 bp | ACTGGGGTACAGGACGGGATAACAGGTGACTGTGAGACAGAAATGTaGCACCCTCTTCATTGTGACACTGTCCTGAAGCCAAGTCCCCTG | + |
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Preference number: 1 (lower is better) Translates to: TGVQDGITGDCETEM*HPLHCDTVLKPSPL Trigger: CAGGGGACTTGGCTTCAGGACAGTGTCACAATGAAGAGGGTGTCACATTTCTGTCTCACAGTCACCTGTTATCCCGTCCTGTACCCCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
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| 3UTR TCA 90 bp | ACTGTGAGACAGAAATGTGACACCCTCTTCATTGTGACACTGTCCTaGAGCCAAGTCCCCTGGAATGCCTCAAGCAAGACCAAGACAGGT | + |
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Preference number: 1 (lower is better) Translates to: TVRQKCDTLFIVTLS*SQVPWNASSKTKTG Trigger: ACCTGTCTTGGTCTTGCTTGAGGCATTCCAGGGGACTTGGCTTCAGGACAGTGTCACAATGAAGAGGGTGTCACATTTCTGTCTCACAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
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| 3UTR-3UTR TCA 90 bp | AGGCCTAGGTCTCCTGACAAGGGCAGGATCAGTGTAGCTGGTCTCCCTCAAGACAGGCACACAGGAGCCTaGTGGGGAGGAGCTGAGGCG | + |
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Preference number: 2 (lower is better) Translates to: RPRSPDKGRISVAGLPQDRHTGA*WGGAEA Trigger: CGCCTCAGCTCCTCCCCATCAGGCTCCTGTGTGCCT...GTCTTGAGGGAGACCAGCTACACTGATCCTGCCCTTGTCAGGAGACCTAGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
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| 3UTR-3UTR GCA 90 bp | AGCCCATGCTCAACAGAATCCCCCTGTGCCCAGCTGTCTCCCACCCTGCAGTGTCTCGATCCCACATCCTaGTGCTCCCTGAGGGGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: SPCSTESPCAQLSPTLQCLDPTS*CSLRGL Trigger: CAGACCCCTCAGGGAGCAGCAGGATGTGGGATCGAG...ACACTGCAGGGTGGGAGACAGCTGGGCACAGGGGGATTCTGTTGAGCATGGGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
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| 3UTR-3UTR TCA 90 bp | AGGCCTAGGTCTCCTGACAAGGGCAGGATCAGTGTAGCTGGTCTCCCTCAAGACCCAAGACAGGTACACTaGGGCAGGCAGCACAGGGCC | + |
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Preference number: 2 (lower is better) Translates to: RPRSPDKGRISVAGLPQDPRQVH*GRQHRA Trigger: GGCCCTGTGCTGCCTGCCTCAGTGTACCTGTCTTGG...GTCTTGAGGGAGACCAGCTACACTGATCCTGCCCTTGTCAGGAGACCTAGGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGAGCCCATGCTCAACAGAATCCCCCTGTGCCCAGCTGTCTCCCACCCTGCACCGGGAAGCCACCAGTaGGATTCAACTGGGCAGACA | + |
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Preference number: 2 (lower is better) Translates to: SEPMLNRIPLCPAVSHPAPGSHQ*DSTGQT Trigger: TGTCTGCCCAGTTGAATCCCACTGGTGGCTTCCCGG...TGCAGGGTGGGAGACAGCTGGGCACAGGGGGATTCTGTTGAGCATGGGCTCTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
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| 3UTR-3UTR TCA 90 bp | CAGGAAGACAGGGATGGCCTAGGGCTTTACCCGTTTGATTTCAGGCCTGTTTCTAGGCACACAGGAGCCTaGTGGGGAGGAGCTGAGGCG | + |
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Preference number: 2 (lower is better) Translates to: QEDRDGLGLYPFDFRPVSRHTGA*WGGAEA Trigger: CGCCTCAGCTCCTCCCCATCAGGCTCCTGTGTGCCT...AGAAACAGGCCTGAAATCAAACGGGTAAAGCCCTAGGCCATCCCTGTCTTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
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| 3UTR-3UTR CCA 90 bp | AGCCCATGCTCAACAGAATCCCCCTGTGCCCAGCTGTCTCCCACCCTGCAGTGTACAGGAAGACAGGGATaGCCTAGGGCTTTACCCGTT | + |
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Preference number: 2 (lower is better) Translates to: SPCSTESPCAQLSPTLQCTGRQG*PRALPV Trigger: AACGGGTAAAGCCCTAGGCCATCCCTGTCTTCCTGT...ACACTGCAGGGTGGGAGACAGCTGGGCACAGGGGGATTCTGTTGAGCATGGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
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| 3UTR-3UTR CCA 90 bp | TCAGAGCCCATGCTCAACAGAATCCCCCTGTGCCCAGCTGTCTCCCACCCTGCACCAGTGGGATTCAACTaGGCAGACATGGGACAGGAA | + |
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Preference number: 2 (lower is better) Translates to: SEPMLNRIPLCPAVSHPAPVGFN*ADMGQE Trigger: TTCCTGTCCCATGTCTGCCCAGTTGAATCCCACTGG...TGCAGGGTGGGAGACAGCTGGGCACAGGGGGATTCTGTTGAGCATGGGCTCTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
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| 3UTR-3UTR GCA 90 bp | AGGGGCTTTGTCAGTTCTGTGGGTTCAGAGCCCATGCTCAACAGAATCCCCCTGCCAAGTCCCCTGGAATaGCTCAAGCAAGACCAAGAC | + |
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Preference number: 2 (lower is better) Translates to: RGFVSSVGSEPMLNRIPLPSPLE*LKQDQD Trigger: GTCTTGGTCTTGCTTGAGGCATTCCAGGGGACTTGG...CAGGGGGATTCTGTTGAGCATGGGCTCTGAACCCACAGAACTGACAAAGCCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
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| 3UTR-3UTR CCA 90 bp | AACAGTTACCACCAGGGACACTGTGGAGTGCTAAGTCTCCTCATCGCGCTTCCACAGTACAGAACAGGCTaGGAAGGGTGCAGGAGCACT | + |
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Preference number: 2 (lower is better) Translates to: NSYHQGHCGVLSLLIALPQYRTG*EGCRST Trigger: AGTGCTCCTGCACCCTTCCCAGCCTGTTCTGTACTG...TGGAAGCGCGATGAGGAGACTTAGCACTCCACAGTGTCCCTGGTGGTAACTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
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| 3UTR-3UTR TCA 90 bp | CTTCCCTGGAAGATTCAAAGCATCTGTCCCAAGGGGCCTCGATCCCACATCCTGATTGTGACACTGTCCTaGAGCCAAGTCCCCTGGAAT | + |
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Preference number: 2 (lower is better) Translates to: LPWKIQSICPKGPRSHILIVTLS*SQVPWN Trigger: ATTCCAGGGGACTTGGCTTCAGGACAGTGTCACAAT...CAGGATGTGGGATCGAGGCCCCTTGGGACAGATGCTTTGAATCTTCCAGGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
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| 3UTR-3UTR TCA 90 bp | CAATCAGTTAATAAGAACAGTTACCACCAGGGACACTGTGGAGTGCTAAGTCTCAGGGCTTTACCCGTTTaGTTTCAGGCCTGTTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: QSVNKNSYHQGHCGVLSLRALPV*FQACFS Trigger: GGAGAAACAGGCCTGAAATCAAACGGGTAAAGCCCT...GAGACTTAGCACTCCACAGTGTCCCTGGTGGTAACTGTTCTTATTAACTGATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
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| 3UTR CCA 72 bp | GGCGCTTTTACTCCTCAGTGCCCGGGAAGCCACCAGTaGGATTCAACTGGGCAGACATGGGACAGGAAGACA | + |
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Preference number: 3 (lower is better) Translates to: GAFTPQCPGSHQ*DSTGQTWDRKT Trigger: TGTCTTCCTGTCCCATGTCTGCCCAGTTGAATCCCACTGGTGGCTTCCCGGGCACTGAGGAGTAAAAGCGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
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| 3UTR CCA 72 bp | CAGCTGTCTCCCACCCTGCAGTGTTGTCTGCGAGCCTaGGACATGCTAACTCCGGGTGACAAACCTGGAAGA | + |
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Preference number: 3 (lower is better) Translates to: QLSPTLQCCLRA*DMLTPGDKPGR Trigger: TCTTCCAGGTTTGTCACCCGGAGTTAGCATGTCCCAGGCTCGCAGACAACACTGCAGGGTGGGAGACAGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
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| 3UTR TCA 72 bp | GTGTTGTCTGCGAGCCTGGGACATGCTAACTCCGGGTaGCAAACCTGGAAGAATCGGAGGCTTCCCTGGAAG | + |
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Preference number: 3 (lower is better) Translates to: VLSASLGHANSG*QTWKNRRLPWK Trigger: CTTCCAGGGAAGCCTCCGATTCTTCCAGGTTTGTCACCCGGAGTTAGCATGTCCCAGGCTCGCAGACAACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
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| 3UTR GCA 72 bp | CATTGTGACACTGTCCTGAAGCCAAGTCCCCTGGAATaGCTCAAGCAAGACCAAGACAGGTACACTGAGGCA | + |
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Preference number: 3 (lower is better) Translates to: HCDTVLKPSPLE*LKQDQDRYTEA Trigger: TGCCTCAGTGTACCTGTCTTGGTCTTGCTTGAGGCATTCCAGGGGACTTGGCTTCAGGACAGTGTCACAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
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| 3UTR TCA 72 bp | TGGGAGGGAGCAACAATTCAACACACACTCCAATACTaGCATGGACCCCTAAGGGGTCAGAGGACACTGAGA | + |
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Preference number: 3 (lower is better) Translates to: WEGATIQHTLQY*HGPLRGQRTLR Trigger: TCTCAGTGTCCTCTGACCCCTTAGGGGTCCATGTCAGTATTGGAGTGTGTGTTGAATTGTTGCTCCCTCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
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| 3UTR TCA 72 bp | CAGGACGGGATAACAGGTGACTGTGAGACAGAAATGTaGCACCCTCTTCATTGTGACACTGTCCTGAAGCCA | + |
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Preference number: 3 (lower is better) Translates to: QDGITGDCETEM*HPLHCDTVLKP Trigger: TGGCTTCAGGACAGTGTCACAATGAAGAGGGTGTCACATTTCTGTCTCACAGTCACCTGTTATCCCGTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
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| CDS-3UTR CCA 90 bp | CAAGGGCAGGATCAGTGTAGCTGGTCTCCCTCAAGACCACCTGACCTCAGGAGGCTCGGAGCCACAGACTaGAAACCCGCCCGGGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: QGQDQCSWSPSRPPDLRRLGATD*KPARAA Trigger: GGCGGCCCGGGCGGGTTTCCAGTCTGTGGCTCCGAG...CCTCCTGAGGTCAGGTGGTCTTGAGGGAGACCAGCTACACTGATCCTGCCCTTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
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| CDS-3UTR GCA 90 bp | CCTGTGCCCAGCTGTCTCCCACCCTGCAGTGTTGTCTGCGAGCCTGGGACATGCGTGTCTGGGTATGGATaGCCAAGAGCCGAGCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: PVPSCLPPCSVVCEPGTCVSGYG*PRAEPG Trigger: GCCTGGCTCGGCTCTTGGGCATCCATACCCAGACAC...GCATGTCCCAGGCTCGCAGACAACACTGCAGGGTGGGAGACAGCTGGGCACAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
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| CDS-3UTR CCA 90 bp | CCAAGTCCCCTGGAATGCCTCAAGCAAGACCAAGACAGGTACACTGAGGCAGGCCTCGGAGCCACAGACTaGAAACCCGCCCGGGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: PSPLECLKQDQDRYTEAGLGATD*KPARAA Trigger: GGCGGCCCGGGCGGGTTTCCAGTCTGTGGCTCCGAG...GCCTGCCTCAGTGTACCTGTCTTGGTCTTGCTTGAGGCATTCCAGGGGACTTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
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| CDS-3UTR CCA 90 bp | CAGAGCCCATGCTCAACAGAATCCCCCTGTGCCCAGCTGTCTCCCACCCTGCAGCCTGGCCGCTTCACCTaGAAGCCATCGGTCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: QSPCSTESPCAQLSPTLQPGRFT*KPSVSW Trigger: CCAGGAGACCGATGGCTTCCAGGTGAAGCGGCCAGG...CTGCAGGGTGGGAGACAGCTGGGCACAGGGGGATTCTGTTGAGCATGGGCTCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
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| CDS-3UTR TCA 90 bp | CAAGTCCCCTGGAATGCCTCAAGCAAGACCAAGACAGGTACACTGAGGCAGGCAGAGCGGTACAGCCCTTaGCCCGGCGCCGGGCCCATT | + |
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Preference number: 4 (lower is better) Translates to: QVPWNASSKTKTGTLRQAERYSP*PGAGPI Trigger: AATGGGCCCGGCGCCGGGTCAAGGGCTGTACCGCTC...TGCCTGCCTCAGTGTACCTGTCTTGGTCTTGCTTGAGGCATTCCAGGGGACTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
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| CDS-3UTR CCA 90 bp | CCTGTGCCCAGCTGTCTCCCACCCTGCAGTGTTGTCTGCGAGCCTGGGACATGCTGTCATTCGGCTACCTaGCAGCATACCTGGTCTCGG | + |
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Preference number: 4 (lower is better) Translates to: PVPSCLPPCSVVCEPGTCCHSAT*QHTWSR Trigger: CCGAGACCAGGTATGCTGCCAGGTAGCCGAATGACA...GCATGTCCCAGGCTCGCAGACAACACTGCAGGGTGGGAGACAGCTGGGCACAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
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| CDS-3UTR TCA 90 bp | CAGGAAGACAGGGATGGCCTAGGGCTTTACCCGTTTGATTTCAGGCCTGTTTCTGAGCGGTACAGCCCTTaGCCCGGCGCCGGGCCCATT | + |
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Preference number: 4 (lower is better) Translates to: QEDRDGLGLYPFDFRPVSERYSP*PGAGPI Trigger: AATGGGCCCGGCGCCGGGTCAAGGGCTGTACCGCTC...AGAAACAGGCCTGAAATCAAACGGGTAAAGCCCTAGGCCATCCCTGTCTTCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
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| CDS-3UTR TCA 90 bp | GGGATTCAACTGGGCAGACATGGGACAGGAAGACAGGGATGGCCTAGGGCTTTAGGACTGGTCCATCCCTaGCTGGGCCAGACCAGGTCG | + |
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Preference number: 4 (lower is better) Translates to: GIQLGRHGTGRQGWPRALGLVHP*LGQTRS Trigger: CGACCTGGTCTGGCCCAGTCAGGGATGGACCAGTCC...TAAAGCCCTAGGCCATCCCTGTCTTCCTGTCCCATGTCTGCCCAGTTGAATCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
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| CDS-3UTR TCA 90 bp | CAGAGCCCATGCTCAACAGAATCCCCCTGTGCCCAGCTGTCTCCCACCCTGCAGCATCAGTCATCGTCTTaGGGTCCCTGCACTGGGACT | + |
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Preference number: 4 (lower is better) Translates to: QSPCSTESPCAQLSPTLQHQSSS*GPCTGT Trigger: AGTCCCAGTGCAGGGACCTCAAGACGATGACTGATG...CTGCAGGGTGGGAGACAGCTGGGCACAGGGGGATTCTGTTGAGCATGGGCTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
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| CDS-3UTR CCA 90 bp | TCAGAGCCCATGCTCAACAGAATCCCCCTGTGCCCAGCTGTCTCCCACCCTGCAAGCCAGGAGGTCCCATaGAAGGTCCCTGAGGTGTCA | + |
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Preference number: 4 (lower is better) Translates to: SEPMLNRIPLCPAVSHPASQEVP*KVPEVS Trigger: TGACACCTCAGGGACCTTCCATGGGACCTCCTGGCT...TGCAGGGTGGGAGACAGCTGGGCACAGGGGGATTCTGTTGAGCATGGGCTCTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
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| CDS-3UTR CCA 90 bp | CTGGAATGCCTCAAGCAAGACCAAGACAGGTACACTGAGGCAGGCAGCACAGGGGGTCTCTTGCGGGACTaGTCCATCCCTGACTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: LECLKQDQDRYTEAGSTGGLLRD*SIPDWA Trigger: GGCCCAGTCAGGGATGGACCAGTCCCGCAAGAGACC...CCCTGTGCTGCCTGCCTCAGTGTACCTGTCTTGGTCTTGCTTGAGGCATTCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
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| CDS-3UTR CCA 90 bp | AGGCCTAGGTCTCCTGACAAGGGCAGGATCAGTGTAGCTGGTCTCCCTCAAGACGGTCTCTTGCGGGACTaGTCCATCCCTGACTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: RPRSPDKGRISVAGLPQDGLLRD*SIPDWA Trigger: GGCCCAGTCAGGGATGGACCAGTCCCGCAAGAGACC...GTCTTGAGGGAGACCAGCTACACTGATCCTGCCCTTGTCAGGAGACCTAGGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
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| CDS-3UTR GCA 90 bp | CTGGAATGCCTCAAGCAAGACCAAGACAGGTACACTGAGGCAGGCAGCACAGGGGAGGTGCAGGTCTCTTaGGGGACTGGTCCATCCCTG | + |
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Preference number: 4 (lower is better) Translates to: LECLKQDQDRYTEAGSTGEVQVS*GTGPSL Trigger: CAGGGATGGACCAGTCCCGCAAGAGACCTGCACCTC...CCCTGTGCTGCCTGCCTCAGTGTACCTGTCTTGGTCTTGCTTGAGGCATTCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
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| CDS-3UTR GCA 90 bp | AGGCCTAGGTCTCCTGACAAGGGCAGGATCAGTGTAGCTGGTCTCCCTCAAGACGTGTCTGGGTATGGATaGCCAAGAGCCGAGCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: RPRSPDKGRISVAGLPQDVSGYG*PRAEPG Trigger: GCCTGGCTCGGCTCTTGGGCATCCATACCCAGACAC...GTCTTGAGGGAGACCAGCTACACTGATCCTGCCCTTGTCAGGAGACCTAGGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
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| CDS-3UTR CCA 90 bp | CTGGAATGCCTCAAGCAAGACCAAGACAGGTACACTGAGGCAGGCAGCACAGGGTGGTCCATCCCTGACTaGGCCAGACCAGGTCGGACT | + |
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Preference number: 4 (lower is better) Translates to: LECLKQDQDRYTEAGSTGWSIPD*ARPGRT Trigger: AGTCCGACCTGGTCTGGCCCAGTCAGGGATGGACCA...CCCTGTGCTGCCTGCCTCAGTGTACCTGTCTTGGTCTTGCTTGAGGCATTCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
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| CDS-3UTR CCA 90 bp | CCAAGTCCCCTGGAATGCCTCAAGCAAGACCAAGACAGGTACACTGAGGCAGGCAAGCCATCGGTCTCCTaGGTAGTGGCGGTCCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: PSPLECLKQDQDRYTEAGKPSVS*VVAVLC Trigger: GCACAGGACCGCCACTACCCAGGAGACCGATGGCTT...GCCTGCCTCAGTGTACCTGTCTTGGTCTTGCTTGAGGCATTCCAGGGGACTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
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| CDS-3UTR CCA 90 bp | CAAGTCCCCTGGAATGCCTCAAGCAAGACCAAGACAGGTACACTGAGGCAGGCACCTGGCCGCTTCACCTaGAAGCCATCGGTCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: QVPWNASSKTKTGTLRQAPGRFT*KPSVSW Trigger: CCAGGAGACCGATGGCTTCCAGGTGAAGCGGCCAGG...TGCCTGCCTCAGTGTACCTGTCTTGGTCTTGCTTGAGGCATTCCAGGGGACTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
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| CDS-3UTR CCA 90 bp | AGGCCTAGGTCTCCTGACAAGGGCAGGATCAGTGTAGCTGGTCTCCCTCAAGACGTGGCGATCTCCTGCTaGCTGGCAGTGGACAACAGG | + |
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Preference number: 4 (lower is better) Translates to: RPRSPDKGRISVAGLPQDVAISC*LAVDNR Trigger: CCTGTTGTCCACTGCCAGCCAGCAGGAGATCGCCAC...GTCTTGAGGGAGACCAGCTACACTGATCCTGCCCTTGTCAGGAGACCTAGGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
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| CDS-3UTR CCA 90 bp | CAGAGCCCATGCTCAACAGAATCCCCCTGTGCCCAGCTGTCTCCCACCCTGCAGCGCTGGGTCTTCAGCTaGTTGATGGTCTCTATCGTC | + |
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Preference number: 4 (lower is better) Translates to: QSPCSTESPCAQLSPTLQRWVFS*LMVSIV Trigger: GACGATAGAGACCATCAACCAGCTGAAGACCCAGCG...CTGCAGGGTGGGAGACAGCTGGGCACAGGGGGATTCTGTTGAGCATGGGCTCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
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| CDS-3UTR TCA 90 bp | AGGCCTAGGTCTCCTGACAAGGGCAGGATCAGTGTAGCTGGTCTCCCTCAAGACCCCATGGAAGGTCCCTaGGGTGTCATTCGGCTACCT | + |
|
Preference number: 4 (lower is better) Translates to: RPRSPDKGRISVAGLPQDPMEGP*GVIRLP Trigger: AGGTAGCCGAATGACACCTCAGGGACCTTCCATGGG...GTCTTGAGGGAGACCAGCTACACTGATCCTGCCCTTGTCAGGAGACCTAGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
||
| CDS-3UTR TCA 90 bp | CCCCTGGAATGCCTCAAGCAAGACCAAGACAGGTACACTGAGGCAGGCAGCACACCCATGGAAGGTCCCTaGGGTGTCATTCGGCTACCT | + |
|
Preference number: 4 (lower is better) Translates to: PLECLKQDQDRYTEAGSTPMEGP*GVIRLP Trigger: AGGTAGCCGAATGACACCTCAGGGACCTTCCATGGG...TGTGCTGCCTGCCTCAGTGTACCTGTCTTGGTCTTGCTTGAGGCATTCCAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
||
| CDS-3UTR TCA 90 bp | AGGCCTAGGTCTCCTGACAAGGGCAGGATCAGTGTAGCTGGTCTCCCTCAAGACGCCACAGTGCTTGGATaGTCACTGGACGTGTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RPRSPDKGRISVAGLPQDATVLG*SLDVSG Trigger: CCCAGACACGTCCAGTGATCATCCAAGCACTGTGGC...GTCTTGAGGGAGACCAGCTACACTGATCCTGCCCTTGTCAGGAGACCTAGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
||
| CDS-3UTR TCA 90 bp | TCAGAGCCCATGCTCAACAGAATCCCCCTGTGCCCAGCTGTCTCCCACCCTGCAGGGCAAAGCTCAACATaGACTCTCGCTGGGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SEPMLNRIPLCPAVSHPAGQSST*TLAGSS Trigger: TGAAGACCCAGCGAGAGTTCATGTTGAGCTTTGCCC...TGCAGGGTGGGAGACAGCTGGGCACAGGGGGATTCTGTTGAGCATGGGCTCTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
||
| CDS-3UTR TCA 90 bp | CCCCTGGAATGCCTCAAGCAAGACCAAGACAGGTACACTGAGGCAGGCAGCACATGGACAAGGCCGCCTTaGTGGGACGTTTCAAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PLECLKQDQDRYTEAGSTWTRPP*WDVSRP Trigger: AGGCCTTGAAACGTCCCATCAAGGCGGCCTTGTCCA...TGTGCTGCCTGCCTCAGTGTACCTGTCTTGGTCTTGCTTGAGGCATTCCAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229236.2 |
||
| CDS-3UTR GCA 90 bp | CAAGTCCCCTGGAATGCCTCAAGCAAGACCAAGACAGGTACACTGAGGCAGGCAGAGGTGCAGGTCTCTTaGGGGACTGGTCCATCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QVPWNASSKTKTGTLRQAEVQVS*GTGPSL Trigger: CAGGGATGGACCAGTCCCGCAAGAGACCTGCACCTC...TGCCTGCCTCAGTGTACCTGTCTTGGTCTTGCTTGAGGCATTCCAGGGGACTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
||
| CDS-3UTR GCA 90 bp | CCCCTGGAATGCCTCAAGCAAGACCAAGACAGGTACACTGAGGCAGGCAGCACACGGATTCCCAGGGCTTaGTCTAACTCTTGCCGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PLECLKQDQDRYTEAGSTRIPRA*SNSCRL Trigger: GAGGCGGCAAGAGTTAGAGCAAGCCCTGGGAATCCG...TGTGCTGCCTGCCTCAGTGTACCTGTCTTGGTCTTGCTTGAGGCATTCCAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
||
| CDS-3UTR CCA 90 bp | CAAGGGCAGGATCAGTGTAGCTGGTCTCCCTCAAGACCACCTGACCTCAGGAGGTGTCATTCGGCTACCTaGCAGCATACCTGGTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: QGQDQCSWSPSRPPDLRRCHSAT*QHTWSR Trigger: CCGAGACCAGGTATGCTGCCAGGTAGCCGAATGACA...CCTCCTGAGGTCAGGTGGTCTTGAGGGAGACCAGCTACACTGATCCTGCCCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
||
| CDS-3UTR CCA 90 bp | CAAGTCCCCTGGAATGCCTCAAGCAAGACCAAGACAGGTACACTGAGGCAGGCATGGTCCATCCCTGACTaGGCCAGACCAGGTCGGACT | + |
|
Preference number: 4 (lower is better) Translates to: QVPWNASSKTKTGTLRQAWSIPD*ARPGRT Trigger: AGTCCGACCTGGTCTGGCCCAGTCAGGGATGGACCA...TGCCTGCCTCAGTGTACCTGTCTTGGTCTTGCTTGAGGCATTCCAGGGGACTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
||
| CDS-3UTR CCA 90 bp | AGCCCATGCTCAACAGAATCCCCCTGTGCCCAGCTGTCTCCCACCCTGCAGTGTCGTTTCAAGGCCTCCTaGATATCTAGCCGCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SPCSTESPCAQLSPTLQCRFKAS*ISSRFL Trigger: GAGGAAGCGGCTAGATATCCAGGAGGCCTTGAAACG...ACACTGCAGGGTGGGAGACAGCTGGGCACAGGGGGATTCTGTTGAGCATGGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
||
| CDS-3UTR CCA 90 bp | CAAGGGCAGGATCAGTGTAGCTGGTCTCCCTCAAGACCACCTGACCTCAGGAGGGATGATGGGCTCTGGTaGCATAAGCAAGGCGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QGQDQCSWSPSRPPDLRRDDGLW*HKQGVE Trigger: CTCCACGCCTTGCTTATGCCACCAGAGCCCATCATC...CCTCCTGAGGTCAGGTGGTCTTGAGGGAGACCAGCTACACTGATCCTGCCCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
||
| CDS-3UTR CCA 90 bp | AGCCCATGCTCAACAGAATCCCCCTGTGCCCAGCTGTCTCCCACCCTGCAGTGTGATGATGATGGGCTCTaGTGGCATAAGCAAGGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: SPCSTESPCAQLSPTLQCDDDGL*WHKQGV Trigger: CACGCCTTGCTTATGCCACCAGAGCCCATCATCATC...ACACTGCAGGGTGGGAGACAGCTGGGCACAGGGGGATTCTGTTGAGCATGGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
||
| CDS-3UTR TCA 90 bp | GGGATTCAACTGGGCAGACATGGGACAGGAAGACAGGGATGGCCTAGGGCTTTAGCCACAGTGCTTGGATaGTCACTGGACGTGTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GIQLGRHGTGRQGWPRALATVLG*SLDVSG Trigger: CCCAGACACGTCCAGTGATCATCCAAGCACTGTGGC...TAAAGCCCTAGGCCATCCCTGTCTTCCTGTCCCATGTCTGCCCAGTTGAATCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
||
| CDS-3UTR TCA 90 bp | AGGCCTAGGTCTCCTGACAAGGGCAGGATCAGTGTAGCTGGTCTCCCTCAAGACACAAACTCTCGCTCGTaGGGGTCCTGGAGCTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RPRSPDKGRISVAGLPQDTNSRS*GSWSLC Trigger: ACACAAGCTCCAGGACCCTCACGAGCGAGAGTTTGT...GTCTTGAGGGAGACCAGCTACACTGATCCTGCCCTTGTCAGGAGACCTAGGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
||
| CDS-3UTR TCA 90 bp | AGGCCTAGGTCTCCTGACAAGGGCAGGATCAGTGTAGCTGGTCTCCCTCAAGACCCGCTGAGGGATCTCTaGGAACTTCATCCGCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RPRSPDKGRISVAGLPQDPLRDL*ELHPLR Trigger: TCTCAGCGGATGAAGTTCTCAGAGATCCCTCAGCGG...GTCTTGAGGGAGACCAGCTACACTGATCCTGCCCTTGTCAGGAGACCTAGGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
||
| CDS-3UTR TCA 90 bp | CAAGTCCCCTGGAATGCCTCAAGCAAGACCAAGACAGGTACACTGAGGCAGGCAAAGGCGTGGAGCCGCTaGGGGATCTCTGAGAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: QVPWNASSKTKTGTLRQAKAWSR*GISENF Trigger: GAAGTTCTCAGAGATCCCTCAGCGGCTCCACGCCTT...TGCCTGCCTCAGTGTACCTGTCTTGGTCTTGCTTGAGGCATTCCAGGGGACTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
||
| CDS-3UTR GCA 90 bp | AGGCCTAGGTCTCCTGACAAGGGCAGGATCAGTGTAGCTGGTCTCCCTCAAGACCTGGATCTGTTGAGGTaGAGGTCTCTTGCGGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: RPRSPDKGRISVAGLPQDLDLLR*RSLAGL Trigger: CAGTCCCGCAAGAGACCTGCACCTCAACAGATCCAG...GTCTTGAGGGAGACCAGCTACACTGATCCTGCCCTTGTCAGGAGACCTAGGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
||
| CDS-3UTR GCA 90 bp | CCAAGTCCCCTGGAATGCCTCAAGCAAGACCAAGACAGGTACACTGAGGCAGGCTTTTGGACCGCCTGCTaGTGGACCTGCTGGATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PSPLECLKQDQDRYTEAGFWTAC*WTCWIC Trigger: ACAGATCCAGCAGGTCCAGCAGCAGGCGGTCCAAAA...GCCTGCCTCAGTGTACCTGTCTTGGTCTTGCTTGAGGCATTCCAGGGGACTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
||
| CDS-3UTR GCA 90 bp | CAAGTCCCCTGGAATGCCTCAAGCAAGACCAAGACAGGTACACTGAGGCAGGCAAGAGTGGCGATCTCCTaGTGGCTGGCAGTGGACAAC | + |
|
Preference number: 4 (lower is better) Translates to: QVPWNASSKTKTGTLRQARVAIS*WLAVDN Trigger: GTTGTCCACTGCCAGCCAGCAGGAGATCGCCACTCT...TGCCTGCCTCAGTGTACCTGTCTTGGTCTTGCTTGAGGCATTCCAGGGGACTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
||
| CDS-3UTR GCA 90 bp | CCAAGTCCCCTGGAATGCCTCAAGCAAGACCAAGACAGGTACACTGAGGCAGGCGCTTGCTCTAACTCTTaGCGCCTCTGCTGCACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PSPLECLKQDQDRYTEAGACSNS*RLCCTL Trigger: CAAGGTGCAGCAGAGGCGGCAAGAGTTAGAGCAAGC...GCCTGCCTCAGTGTACCTGTCTTGGTCTTGCTTGAGGCATTCCAGGGGACTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
||
| CDS-3UTR GCA 90 bp | CAAGTCCCCTGGAATGCCTCAAGCAAGACCAAGACAGGTACACTGAGGCAGGCACGGATTCCCAGGGCTTaGTCTAACTCTTGCCGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QVPWNASSKTKTGTLRQARIPRA*SNSCRL Trigger: GAGGCGGCAAGAGTTAGAGCAAGCCCTGGGAATCCG...TGCCTGCCTCAGTGTACCTGTCTTGGTCTTGCTTGAGGCATTCCAGGGGACTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
||
| CDS-3UTR CCA 90 bp | AGCCCATGCTCAACAGAATCCCCCTGTGCCCAGCTGTCTCCCACCCTGCAGTGTTACTGCCACAGTGCTTaGATGATCACTGGACGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SPCSTESPCAQLSPTLQCYCHSA*MITGRV Trigger: GACACGTCCAGTGATCATCCAAGCACTGTGGCAGTA...ACACTGCAGGGTGGGAGACAGCTGGGCACAGGGGGATTCTGTTGAGCATGGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
||
| CDS-3UTR CCA 90 bp | CAAGGGCAGGATCAGTGTAGCTGGTCTCCCTCAAGACCACCTGACCTCAGGAGGCGCTGGGTCTTCAGCTaGTTGATGGTCTCTATCGTC | + |
|
Preference number: 4 (lower is better) Translates to: QGQDQCSWSPSRPPDLRRRWVFS*LMVSIV Trigger: GACGATAGAGACCATCAACCAGCTGAAGACCCAGCG...CCTCCTGAGGTCAGGTGGTCTTGAGGGAGACCAGCTACACTGATCCTGCCCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
||
| CDS-3UTR TCA 90 bp | CTTCCCTGGAAGATTCAAAGCATCTGTCCCAAGGGGCCTCGATCCCACATCCTGACAAACTCTCGCTCGTaGGGGTCCTGGAGCTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LPWKIQSICPKGPRSHILTNSRS*GSWSLC Trigger: ACACAAGCTCCAGGACCCTCACGAGCGAGAGTTTGT...CAGGATGTGGGATCGAGGCCCCTTGGGACAGATGCTTTGAATCTTCCAGGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
||
| CDS-3UTR TCA 90 bp | CTTCCCTGGAAGATTCAAAGCATCTGTCCCAAGGGGCCTCGATCCCACATCCTGCCGCTGAGGGATCTCTaGGAACTTCATCCGCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LPWKIQSICPKGPRSHILPLRDL*ELHPLR Trigger: TCTCAGCGGATGAAGTTCTCAGAGATCCCTCAGCGG...CAGGATGTGGGATCGAGGCCCCTTGGGACAGATGCTTTGAATCTTCCAGGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
||
| CDS-3UTR TCA 90 bp | AACAGTTACCACCAGGGACACTGTGGAGTGCTAAGTCTCCTCATCGCGCTTCCAAAGGCGTGGAGCCGCTaGGGGATCTCTGAGAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: NSYHQGHCGVLSLLIALPKAWSR*GISENF Trigger: GAAGTTCTCAGAGATCCCTCAGCGGCTCCACGCCTT...TGGAAGCGCGATGAGGAGACTTAGCACTCCACAGTGTCCCTGGTGGTAACTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
||
| CDS-3UTR TCA 90 bp | CCCCTGGAATGCCTCAAGCAAGACCAAGACAGGTACACTGAGGCAGGCAGCACAGGGCAAAGCTCAACATaGACTCTCGCTGGGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PLECLKQDQDRYTEAGSTGQSST*TLAGSS Trigger: TGAAGACCCAGCGAGAGTTCATGTTGAGCTTTGCCC...TGTGCTGCCTGCCTCAGTGTACCTGTCTTGGTCTTGCTTGAGGCATTCCAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
||
| CDS-3UTR TCA 90 bp | CCAAGTCCCCTGGAATGCCTCAAGCAAGACCAAGACAGGTACACTGAGGCAGGCTCATTGATGAAACCCTaGGGGTCTCGGGCAAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PSPLECLKQDQDRYTEAGSLMKP*GSRAKL Trigger: GAGCTTTGCCCGAGACCCTCAGGGTTTCATCAATGA...GCCTGCCTCAGTGTACCTGTCTTGGTCTTGCTTGAGGCATTCCAGGGGACTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
||
| CDS-3UTR TCA 90 bp | CAAGTCCCCTGGAATGCCTCAAGCAAGACCAAGACAGGTACACTGAGGCAGGCACATCAGTCATCGTCTTaGGGTCCCTGCACTGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: QVPWNASSKTKTGTLRQAHQSSS*GPCTGT Trigger: AGTCCCAGTGCAGGGACCTCAAGACGATGACTGATG...TGCCTGCCTCAGTGTACCTGTCTTGGTCTTGCTTGAGGCATTCCAGGGGACTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
||
| CDS-3UTR GCA 90 bp | AACAGTTACCACCAGGGACACTGTGGAGTGCTAAGTCTCCTCATCGCGCTTCCAAGAGTGGCGATCTCCTaGTGGCTGGCAGTGGACAAC | + |
|
Preference number: 4 (lower is better) Translates to: NSYHQGHCGVLSLLIALPRVAIS*WLAVDN Trigger: GTTGTCCACTGCCAGCCAGCAGGAGATCGCCACTCT...TGGAAGCGCGATGAGGAGACTTAGCACTCCACAGTGTCCCTGGTGGTAACTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
||
| CDS-3UTR CCA 90 bp | CTGGAATGCCTCAAGCAAGACCAAGACAGGTACACTGAGGCAGGCAGCACAGGGTACATTCACATCTCCTaGCCGCTTCACCTGGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LECLKQDQDRYTEAGSTGYIHIS*PLHLEA Trigger: GGCTTCCAGGTGAAGCGGCCAGGAGATGTGAATGTA...CCCTGTGCTGCCTGCCTCAGTGTACCTGTCTTGGTCTTGCTTGAGGCATTCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
||
| CDS-3UTR CCA 90 bp | CAAGTCCCCTGGAATGCCTCAAGCAAGACCAAGACAGGTACACTGAGGCAGGCAGATGATGGGCTCTGGTaGCATAAGCAAGGCGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QVPWNASSKTKTGTLRQADDGLW*HKQGVE Trigger: CTCCACGCCTTGCTTATGCCACCAGAGCCCATCATC...TGCCTGCCTCAGTGTACCTGTCTTGGTCTTGCTTGAGGCATTCCAGGGGACTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
||
| CDS-3UTR CCA 90 bp | CCCCTGGAATGCCTCAAGCAAGACCAAGACAGGTACACTGAGGCAGGCAGCACAGATGATGATGGGCTCTaGTGGCATAAGCAAGGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: PLECLKQDQDRYTEAGSTDDDGL*WHKQGV Trigger: CACGCCTTGCTTATGCCACCAGAGCCCATCATCATC...TGTGCTGCCTGCCTCAGTGTACCTGTCTTGGTCTTGCTTGAGGCATTCCAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
||
| CDS-3UTR CCA 90 bp | GGGCAGGGTGGAGTGAATAAACAAGCCACTCCTCTAACAGCAGGAAGGAACAGTGTGGCGATCTCCTGCTaGCTGGCAGTGGACAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: GQGGVNKQATPLTAGRNSVAISC*LAVDNR Trigger: CCTGTTGTCCACTGCCAGCCAGCAGGAGATCGCCAC...ACTGTTCCTTCCTGCTGTTAGAGGAGTGGCTTGTTTATTCACTCCACCCTGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
||
| CDS-3UTR CCA 90 bp | AGGCCTAGGTCTCCTGACAAGGGCAGGATCAGTGTAGCTGGTCTCCCTCAAGACTCTTGTTGTCTAGAGTaGCGATCTCCTGCTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RPRSPDKGRISVAGLPQDSCCLE*RSPAGW Trigger: CCAGCCAGCAGGAGATCGCCACTCTAGACAACAAGA...GTCTTGAGGGAGACCAGCTACACTGATCCTGCCCTTGTCAGGAGACCTAGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
||
| CDS-3UTR CCA 90 bp | CCCCTGGAATGCCTCAAGCAAGACCAAGACAGGTACACTGAGGCAGGCAGCACAGCCTCTGCTGCACCTTaGAGTAGAAGTATCGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: PLECLKQDQDRYTEAGSTASAAP*SRSIGT Trigger: TGTGCCGATACTTCTACTCCAAGGTGCAGCAGAGGC...TGTGCTGCCTGCCTCAGTGTACCTGTCTTGGTCTTGCTTGAGGCATTCCAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
||
| CDS-3UTR CCA 90 bp | AGGCCTAGGTCTCCTGACAAGGGCAGGATCAGTGTAGCTGGTCTCCCTCAAGACGCCTCTGCTGCACCTTaGAGTAGAAGTATCGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: RPRSPDKGRISVAGLPQDASAAP*SRSIGT Trigger: TGTGCCGATACTTCTACTCCAAGGTGCAGCAGAGGC...GTCTTGAGGGAGACCAGCTACACTGATCCTGCCCTTGTCAGGAGACCTAGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
||
| CDS-3UTR TCA 90 bp | CAAGTCCCCTGGAATGCCTCAAGCAAGACCAAGACAGGTACACTGAGGCAGGCATCATTGATGAAACCCTaGGGGTCTCGGGCAAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QVPWNASSKTKTGTLRQASLMKP*GSRAKL Trigger: GAGCTTTGCCCGAGACCCTCAGGGTTTCATCAATGA...TGCCTGCCTCAGTGTACCTGTCTTGGTCTTGCTTGAGGCATTCCAGGGGACTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
||
| CDS-3UTR GCA 90 bp | AGCCCATGCTCAACAGAATCCCCCTGTGCCCAGCTGTCTCCCACCCTGCAGTGTAATATACTGCCACAGTaGTTGGATGATCACTGGACG | + |
|
Preference number: 4 (lower is better) Translates to: SPCSTESPCAQLSPTLQCNILPQ*LDDHWT Trigger: CGTCCAGTGATCATCCAAGCACTGTGGCAGTATATT...ACACTGCAGGGTGGGAGACAGCTGGGCACAGGGGGATTCTGTTGAGCATGGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
||
| CDS-3UTR CCA 90 bp | CAAGTCCCCTGGAATGCCTCAAGCAAGACCAAGACAGGTACACTGAGGCAGGCACGTTTCAAGGCCTCCTaGATATCTAGCCGCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QVPWNASSKTKTGTLRQARFKAS*ISSRFL Trigger: GAGGAAGCGGCTAGATATCCAGGAGGCCTTGAAACG...TGCCTGCCTCAGTGTACCTGTCTTGGTCTTGCTTGAGGCATTCCAGGGGACTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
||
| CDS-3UTR CCA 90 bp | AGGGGCTTTGTCAGTTCTGTGGGTTCAGAGCCCATGCTCAACAGAATCCCCCTGTACATTCACATCTCCTaGCCGCTTCACCTGGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RGFVSSVGSEPMLNRIPLYIHIS*PLHLEA Trigger: GGCTTCCAGGTGAAGCGGCCAGGAGATGTGAATGTA...CAGGGGGATTCTGTTGAGCATGGGCTCTGAACCCACAGAACTGACAAAGCCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
||
| CDS-3UTR CCA 90 bp | AGGGGCTTTGTCAGTTCTGTGGGTTCAGAGCCCATGCTCAACAGAATCCCCCTGATCACTGGACGTGTCTaGGTATGGATGCCCAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RGFVSSVGSEPMLNRIPLITGRV*VWMPKS Trigger: GCTCTTGGGCATCCATACCCAGACACGTCCAGTGAT...CAGGGGGATTCTGTTGAGCATGGGCTCTGAACCCACAGAACTGACAAAGCCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
||
| CDS-3UTR CCA 90 bp | CAAGTCCCCTGGAATGCCTCAAGCAAGACCAAGACAGGTACACTGAGGCAGGCAATCACTGGACGTGTCTaGGTATGGATGCCCAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QVPWNASSKTKTGTLRQAITGRV*VWMPKS Trigger: GCTCTTGGGCATCCATACCCAGACACGTCCAGTGAT...TGCCTGCCTCAGTGTACCTGTCTTGGTCTTGCTTGAGGCATTCCAGGGGACTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
||
| CDS-3UTR CCA 90 bp | CCAAGTCCCCTGGAATGCCTCAAGCAAGACCAAGACAGGTACACTGAGGCAGGCCACGCGGTCTTTTTCTaGTCATTTGGGTCCACACTG | + |
|
Preference number: 4 (lower is better) Translates to: PSPLECLKQDQDRYTEAGHAVFF*SFGSTL Trigger: CAGTGTGGACCCAAATGACCAGAAAAAGACCGCGTG...GCCTGCCTCAGTGTACCTGTCTTGGTCTTGCTTGAGGCATTCCAGGGGACTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
||
| CDS-3UTR CCA 90 bp | CTTCCCTGGAAGATTCAAAGCATCTGTCCCAAGGGGCCTCGATCCCACATCCTGCCTGCTGGCTGGCAGTaGACAACAGGAAAGAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LPWKIQSICPKGPRSHILPAGWQ*TTGKSS Trigger: TGAACTCTTTCCTGTTGTCCACTGCCAGCCAGCAGG...CAGGATGTGGGATCGAGGCCCCTTGGGACAGATGCTTTGAATCTTCCAGGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
||
| CDS-3UTR CCA 90 bp | CAAGTCCCCTGGAATGCCTCAAGCAAGACCAAGACAGGTACACTGAGGCAGGCACCTGCTGGCTGGCAGTaGACAACAGGAAAGAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QVPWNASSKTKTGTLRQAPAGWQ*TTGKSS Trigger: TGAACTCTTTCCTGTTGTCCACTGCCAGCCAGCAGG...TGCCTGCCTCAGTGTACCTGTCTTGGTCTTGCTTGAGGCATTCCAGGGGACTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
||
| CDS-3UTR CCA 90 bp | GGGATTCAACTGGGCAGACATGGGACAGGAAGACAGGGATGGCCTAGGGCTTTATCTTGTTGTCTAGAGTaGCGATCTCCTGCTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GIQLGRHGTGRQGWPRALSCCLE*RSPAGW Trigger: CCAGCCAGCAGGAGATCGCCACTCTAGACAACAAGA...TAAAGCCCTAGGCCATCCCTGTCTTCCTGTCCCATGTCTGCCCAGTTGAATCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
||
| CDS-3UTR TCA 90 bp | CTGGAATGCCTCAAGCAAGACCAAGACAGGTACACTGAGGCAGGCAGCACAGGGAGTTCCCGAATCCTTTaGGGTAGGATTTTGTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LECLKQDQDRYTEAGSTGSSRIL*GRILSA Trigger: GGCTGACAAAATCCTACCTCAAAGGATTCGGGAACT...CCCTGTGCTGCCTGCCTCAGTGTACCTGTCTTGGTCTTGCTTGAGGCATTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
||
| CDS-3UTR TCA 90 bp | CCAAGTCCCCTGGAATGCCTCAAGCAAGACCAAGACAGGTACACTGAGGCAGGCGAGAACTTCATCCGCTaGGATTCAAAGATCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PSPLECLKQDQDRYTEAGENFIR*DSKICW Trigger: CCAGCAGATCTTTGAATCTCAGCGGATGAAGTTCTC...GCCTGCCTCAGTGTACCTGTCTTGGTCTTGCTTGAGGCATTCCAGGGGACTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
||
| CDS-3UTR CCA 90 bp | TACCACCAGGGACACTGTGGAGTGCTAAGTCTCCTCATCGCGCTTCCAGCCAGATGCTTGGATGATCACTaGACGTGTCTGGGTATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: YHQGHCGVLSLLIALPARCLDDH*TCLGMD Trigger: ATCCATACCCAGACACGTCCAGTGATCATCCAAGCA...TCTGGCTGGAAGCGCGATGAGGAGACTTAGCACTCCACAGTGTCCCTGGTGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
||
| CDS-3UTR CCA 90 bp | CCAAGTCCCCTGGAATGCCTCAAGCAAGACCAAGACAGGTACACTGAGGCAGGCTGCTTGGATGATCACTaGACGTGTCTGGGTATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PSPLECLKQDQDRYTEAGCLDDH*TCLGMD Trigger: ATCCATACCCAGACACGTCCAGTGATCATCCAAGCA...GCCTGCCTCAGTGTACCTGTCTTGGTCTTGCTTGAGGCATTCCAGGGGACTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
||
| CDS-3UTR CCA 90 bp | CAAGTCCCCTGGAATGCCTCAAGCAAGACCAAGACAGGTACACTGAGGCAGGCATACTGCCACAGTGCTTaGATGATCACTGGACGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QVPWNASSKTKTGTLRQAYCHSA*MITGRV Trigger: GACACGTCCAGTGATCATCCAAGCACTGTGGCAGTA...TGCCTGCCTCAGTGTACCTGTCTTGGTCTTGCTTGAGGCATTCCAGGGGACTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
||
| CDS-3UTR CCA 90 bp | CCATGCTCAACAGAATCCCCCTGTGCCCAGCTGTCTCCCACCCTGCAGTGTTGTAGGAAAGAGTTCATCTaGGTCTTCAGAGTGTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: PCSTESPCAQLSPTLQCCRKEFI*VFRVSS Trigger: GGATGACACTCTGAAGACCCAGATGAACTCTTTCCT...ACAACACTGCAGGGTGGGAGACAGCTGGGCACAGGGGGATTCTGTTGAGCATGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
||
| CDS-3UTR TCA 90 bp | CAAGTCCCCTGGAATGCCTCAAGCAAGACCAAGACAGGTACACTGAGGCAGGCAAGTTCCCGAATCCTTTaGGGTAGGATTTTGTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QVPWNASSKTKTGTLRQASSRIL*GRILSA Trigger: GGCTGACAAAATCCTACCTCAAAGGATTCGGGAACT...TGCCTGCCTCAGTGTACCTGTCTTGGTCTTGCTTGAGGCATTCCAGGGGACTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
||
| CDS-3UTR GCA 90 bp | CCAAGTCCCCTGGAATGCCTCAAGCAAGACCAAGACAGGTACACTGAGGCAGGCAATATACTGCCACAGTaGTTGGATGATCACTGGACG | + |
|
Preference number: 4 (lower is better) Translates to: PSPLECLKQDQDRYTEAGNILPQ*LDDHWT Trigger: CGTCCAGTGATCATCCAAGCACTGTGGCAGTATATT...GCCTGCCTCAGTGTACCTGTCTTGGTCTTGCTTGAGGCATTCCAGGGGACTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
||
| CDS-3UTR CCA 90 bp | CAAGGGCAGGATCAGTGTAGCTGGTCTCCCTCAAGACCACCTGACCTCAGGAGGTTCTCTTTTGCTTGGTaGCGTCATATTTGGACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QGQDQCSWSPSRPPDLRRFSFAW*RHIWTR Trigger: CCTTGTCCAAATATGACGCCACCAAGCAAAAGAGAA...CCTCCTGAGGTCAGGTGGTCTTGAGGGAGACCAGCTACACTGATCCTGCCCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
||
| CDS-3UTR CCA 90 bp | CAAGGGCAGGATCAGTGTAGCTGGTCTCCCTCAAGACCACCTGACCTCAGGAGGCTTTTTCTGGTCATTTaGGTCCACACTGATGACATG | + |
|
Preference number: 4 (lower is better) Translates to: QGQDQCSWSPSRPPDLRRLFLVI*VHTDDM Trigger: CATGTCATCAGTGTGGACCCAAATGACCAGAAAAAG...CCTCCTGAGGTCAGGTGGTCTTGAGGGAGACCAGCTACACTGATCCTGCCCTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
||
| CDS-3UTR CCA 90 bp | CAAGGGCAGGATCAGTGTAGCTGGTCTCCCTCAAGACCACCTGACCTCAGGAGGGTCTCTATCGTCTCATaGATCTTGTTGTCTAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: QGQDQCSWSPSRPPDLRRVSIVS*ILLSRV Trigger: CACTCTAGACAACAAGATCCATGAGACGATAGAGAC...CCTCCTGAGGTCAGGTGGTCTTGAGGGAGACCAGCTACACTGATCCTGCCCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
||
| CDS-3UTR TCA 90 bp | CAAGGGCAGGATCAGTGTAGCTGGTCTCCCTCAAGACCACCTGACCTCAGGAGGTTTTTCTTTGCATTGTaGTTTCGATTTTGGACCGCC | + |
|
Preference number: 4 (lower is better) Translates to: QGQDQCSWSPSRPPDLRRFFFAL*FRFWTA Trigger: GGCGGTCCAAAATCGAAATCACAATGCAAAGAAAAA...CCTCCTGAGGTCAGGTGGTCTTGAGGGAGACCAGCTACACTGATCCTGCCCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
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| CDS-3UTR TCA 90 bp | CTTCCCTGGAAGATTCAAAGCATCTGTCCCAAGGGGCCTCGATCCCACATCCTGTCCACACTGATGACATaGTTGATGATGATGGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LPWKIQSICPKGPRSHILSTLMT*LMMMGS Trigger: AGAGCCCATCATCATCAATCATGTCATCAGTGTGGA...CAGGATGTGGGATCGAGGCCCCTTGGGACAGATGCTTTGAATCTTCCAGGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
||
| CDS-3UTR TCA 90 bp | CAAGTCCCCTGGAATGCCTCAAGCAAGACCAAGACAGGTACACTGAGGCAGGCATCCACACTGATGACATaGTTGATGATGATGGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QVPWNASSKTKTGTLRQASTLMT*LMMMGS Trigger: AGAGCCCATCATCATCAATCATGTCATCAGTGTGGA...TGCCTGCCTCAGTGTACCTGTCTTGGTCTTGCTTGAGGCATTCCAGGGGACTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
||
| CDS-3UTR CCA 90 bp | CAATCAGTTAATAAGAACAGTTACCACCAGGGACACTGTGGAGTGCTAAGTCTCAAGCCATCGGTCTCCTaGGTAGTGGCGGTCCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QSVNKNSYHQGHCGVLSLKPSVS*VVAVLC Trigger: GCACAGGACCGCCACTACCCAGGAGACCGATGGCTT...GAGACTTAGCACTCCACAGTGTCCCTGGTGGTAACTGTTCTTATTAACTGATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
||
| CDS-3UTR CCA 90 bp | CCCCTGGAATGCCTCAAGCAAGACCAAGACAGGTACACTGAGGCAGGCAGCACACTTTTTCTGGTCATTTaGGTCCACACTGATGACATG | + |
|
Preference number: 4 (lower is better) Translates to: PLECLKQDQDRYTEAGSTLFLVI*VHTDDM Trigger: CATGTCATCAGTGTGGACCCAAATGACCAGAAAAAG...TGTGCTGCCTGCCTCAGTGTACCTGTCTTGGTCTTGCTTGAGGCATTCCAGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
||
| CDS-3UTR CCA 90 bp | CAAGTCCCCTGGAATGCCTCAAGCAAGACCAAGACAGGTACACTGAGGCAGGCAAGGAAAGAGTTCATCTaGGTCTTCAGAGTGTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: QVPWNASSKTKTGTLRQARKEFI*VFRVSS Trigger: GGATGACACTCTGAAGACCCAGATGAACTCTTTCCT...TGCCTGCCTCAGTGTACCTGTCTTGGTCTTGCTTGAGGCATTCCAGGGGACTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
||
| CDS-3UTR CCA 90 bp | CCCCTGGAATGCCTCAAGCAAGACCAAGACAGGTACACTGAGGCAGGCAGCACAGTCTCTATCGTCTCATaGATCTTGTTGTCTAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PLECLKQDQDRYTEAGSTVSIVS*ILLSRV Trigger: CACTCTAGACAACAAGATCCATGAGACGATAGAGAC...TGTGCTGCCTGCCTCAGTGTACCTGTCTTGGTCTTGCTTGAGGCATTCCAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
||
| CDS-3UTR TCA 90 bp | CCAAGTCCCCTGGAATGCCTCAAGCAAGACCAAGACAGGTACACTGAGGCAGGCTTTTTCTTTGCATTGTaGTTTCGATTTTGGACCGCC | + |
|
Preference number: 4 (lower is better) Translates to: PSPLECLKQDQDRYTEAGFFFAL*FRFWTA Trigger: GGCGGTCCAAAATCGAAATCACAATGCAAAGAAAAA...GCCTGCCTCAGTGTACCTGTCTTGGTCTTGCTTGAGGCATTCCAGGGGACTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
||
| CDS-3UTR GCA 90 bp | CAAGGGCAGGATCAGTGTAGCTGGTCTCCCTCAAGACCACCTGACCTCAGGAGGTGTGTTTTAATATACTaGCACAGTGCTTGGATGATC | + |
|
Preference number: 4 (lower is better) Translates to: QGQDQCSWSPSRPPDLRRCVLIY*HSAWMI Trigger: GATCATCCAAGCACTGTGGCAGTATATTAAAACACA...CCTCCTGAGGTCAGGTGGTCTTGAGGGAGACCAGCTACACTGATCCTGCCCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
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| CDS-3UTR CCA 90 bp | CAAGTCCCCTGGAATGCCTCAAGCAAGACCAAGACAGGTACACTGAGGCAGGCATTCTCTTTTGCTTGGTaGCGTCATATTTGGACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QVPWNASSKTKTGTLRQAFSFAW*RHIWTR Trigger: CCTTGTCCAAATATGACGCCACCAAGCAAAAGAGAA...TGCCTGCCTCAGTGTACCTGTCTTGGTCTTGCTTGAGGCATTCCAGGGGACTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
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| CDS-3UTR CCA 90 bp | AGGCCTAGGTCTCCTGACAAGGGCAGGATCAGTGTAGCTGGTCTCCCTCAAGACACTTTCTCTTTTGCTTaGTGGCGTCATATTTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: RPRSPDKGRISVAGLPQDTFSFA*WRHIWT Trigger: TGTCCAAATATGACGCCACCAAGCAAAAGAGAAAGT...GTCTTGAGGGAGACCAGCTACACTGATCCTGCCCTTGTCAGGAGACCTAGGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
||
| CDS-3UTR CCA 90 bp | CCAAGTCCCCTGGAATGCCTCAAGCAAGACCAAGACAGGTACACTGAGGCAGGCACTTTCTCTTTTGCTTaGTGGCGTCATATTTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: PSPLECLKQDQDRYTEAGTFSFA*WRHIWT Trigger: TGTCCAAATATGACGCCACCAAGCAAAAGAGAAAGT...GCCTGCCTCAGTGTACCTGTCTTGGTCTTGCTTGAGGCATTCCAGGGGACTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
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| CDS-3UTR CCA 90 bp | GGGATTCAACTGGGCAGACATGGGACAGGAAGACAGGGATGGCCTAGGGCTTTAGATTCAAAGATCTGCTaGAGGTACTTGTCACAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GIQLGRHGTGRQGWPRALDSKIC*RYLSQR Trigger: TCTCTGTGACAAGTACCTCCAGCAGATCTTTGAATC...TAAAGCCCTAGGCCATCCCTGTCTTCCTGTCCCATGTCTGCCCAGTTGAATCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
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| CDS-3UTR CCA 90 bp | CAAGTCCCCTGGAATGCCTCAAGCAAGACCAAGACAGGTACACTGAGGCAGGCAGATTCAAAGATCTGCTaGAGGTACTTGTCACAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QVPWNASSKTKTGTLRQADSKIC*RYLSQR Trigger: TCTCTGTGACAAGTACCTCCAGCAGATCTTTGAATC...TGCCTGCCTCAGTGTACCTGTCTTGGTCTTGCTTGAGGCATTCCAGGGGACTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
||
| CDS-3UTR GCA 90 bp | CAATCAGTTAATAAGAACAGTTACCACCAGGGACACTGTGGAGTGCTAAGTCTCTTTTGGACCGCCTGCTaGTGGACCTGCTGGATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QSVNKNSYHQGHCGVLSLFWTAC*WTCWIC Trigger: ACAGATCCAGCAGGTCCAGCAGCAGGCGGTCCAAAA...GAGACTTAGCACTCCACAGTGTCCCTGGTGGTAACTGTTCTTATTAACTGATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
||
| CDS-3UTR CCA 90 bp | CAAGGGCAGGATCAGTGTAGCTGGTCTCCCTCAAGACCACCTGACCTCAGGAGGTTCCTCATAATAGTCTaGTCCAGTTTCCTTTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: QGQDQCSWSPSRPPDLRRFLIIV*SSFLSK Trigger: TTTTGAAAGGAAACTGGACCAGACTATTATGAGGAA...CCTCCTGAGGTCAGGTGGTCTTGAGGGAGACCAGCTACACTGATCCTGCCCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
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| CDS-3UTR GCA 90 bp | CAAGTCCCCTGGAATGCCTCAAGCAAGACCAAGACAGGTACACTGAGGCAGGCATGTGTTTTAATATACTaGCACAGTGCTTGGATGATC | + |
|
Preference number: 4 (lower is better) Translates to: QVPWNASSKTKTGTLRQACVLIY*HSAWMI Trigger: GATCATCCAAGCACTGTGGCAGTATATTAAAACACA...TGCCTGCCTCAGTGTACCTGTCTTGGTCTTGCTTGAGGCATTCCAGGGGACTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
||
| CDS-3UTR TCA 90 bp | CAATCAGTTAATAAGAACAGTTACCACCAGGGACACTGTGGAGTGCTAAGTCTCGAGAACTTCATCCGCTaGGATTCAAAGATCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QSVNKNSYHQGHCGVLSLENFIR*DSKICW Trigger: CCAGCAGATCTTTGAATCTCAGCGGATGAAGTTCTC...GAGACTTAGCACTCCACAGTGTCCCTGGTGGTAACTGTTCTTATTAACTGATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
||
| CDS-3UTR CCA 90 bp | GGGCAGGGTGGAGTGAATAAACAAGCCACTCCTCTAACAGCAGGAAGGAACAGTTTCCTCATAATAGTCTaGTCCAGTTTCCTTTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: GQGGVNKQATPLTAGRNSFLIIV*SSFLSK Trigger: TTTTGAAAGGAAACTGGACCAGACTATTATGAGGAA...ACTGTTCCTTCCTGCTGTTAGAGGAGTGGCTTGTTTATTCACTCCACCCTGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
||
| CDS GCA 90 bp | CCGCCTGCTGCTGGACCTGCTGGATCTGTTGAGGTGCAGGTCTCTTaGGGGACTGGTCCATCCCTGACTGGGCCAGACCAGGTCGGACTG | + |
|
Preference number: 5 (lower is better) Translates to: PPAAGPAGSVEVQVS*GTGPSLTGPDQVGL Trigger: CAGTCCGACCTGGTCTGGCCCAGTCAGGGATGGACCAGTCCCGCAAGAGACCTGCACCTCAACAGATCCAGCAGGTCCAGCAGCAGGCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023759.6 ENSMUST00000228984.2 ENSMUST00000229236.2 ENSMUST00000229845.2 ENSMUST00000230530.2 |
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| CDS-3UTR CAA 90 bp | TACCACCAGGGACACTGTGGAGTGCTAAGTCTCCTCATCGCGCTTCCAGCCAGAAGAGCGGTACAGCCCTaGACCCGGCGCCGGGCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: YHQGHCGVLSLLIALPARRAVQP*TRRRAH Trigger: ATGGGCCCGGCGCCGGGTCAAGGGCTGTACCGCTCT...TCTGGCTGGAAGCGCGATGAGGAGACTTAGCACTCCACAGTGTCCCTGGTGGTA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
||
| CDS-3UTR CAA 90 bp | CCAAGTCCCCTGGAATGCCTCAAGCAAGACCAAGACAGGTACACTGAGGCAGGCAGAGCGGTACAGCCCTaGACCCGGCGCCGGGCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: PSPLECLKQDQDRYTEAGRAVQP*TRRRAH Trigger: ATGGGCCCGGCGCCGGGTCAAGGGCTGTACCGCTCT...GCCTGCCTCAGTGTACCTGTCTTGGTCTTGCTTGAGGCATTCCAGGGGACTTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
||
| CDS-3UTR CAA 90 bp | CAAGGGCAGGATCAGTGTAGCTGGTCTCCCTCAAGACCACCTGACCTCAGGAGGTTGGACAAGGCCGCCTaGATGGGACGTTTCAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: QGQDQCSWSPSRPPDLRRLDKAA*MGRFKA Trigger: GGCCTTGAAACGTCCCATCAAGGCGGCCTTGTCCAA...CCTCCTGAGGTCAGGTGGTCTTGAGGGAGACCAGCTACACTGATCCTGCCCTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229236.2 |
||
| CDS-3UTR CAA 90 bp | AGGCCTAGGTCTCCTGACAAGGGCAGGATCAGTGTAGCTGGTCTCCCTCAAGACGACCTGCTGGATCTGTaGAGGTGCAGGTCTCTTGCG | + |
|
Preference number: 5 (lower is better) Translates to: RPRSPDKGRISVAGLPQDDLLDL*RCRSLA Trigger: CGCAAGAGACCTGCACCTCAACAGATCCAGCAGGTC...GTCTTGAGGGAGACCAGCTACACTGATCCTGCCCTTGTCAGGAGACCTAGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
||
| CDS-3UTR CAA 90 bp | CTTCCCTGGAAGATTCAAAGCATCTGTCCCAAGGGGCCTCGATCCCACATCCTGGACCTGCTGGATCTGTaGAGGTGCAGGTCTCTTGCG | + |
|
Preference number: 5 (lower is better) Translates to: LPWKIQSICPKGPRSHILDLLDL*RCRSLA Trigger: CGCAAGAGACCTGCACCTCAACAGATCCAGCAGGTC...CAGGATGTGGGATCGAGGCCCCTTGGGACAGATGCTTTGAATCTTCCAGGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
||
| CDS-3UTR CAA 90 bp | CAGAGCCCATGCTCAACAGAATCCCCCTGTGCCCAGCTGTCTCCCACCCTGCAGATCTGCTGGAGGTACTaGTCACAGAGAACAAACTCT | + |
|
Preference number: 5 (lower is better) Translates to: QSPCSTESPCAQLSPTLQICWRY*SQRTNS Trigger: AGAGTTTGTTCTCTGTGACAAGTACCTCCAGCAGAT...CTGCAGGGTGGGAGACAGCTGGGCACAGGGGGATTCTGTTGAGCATGGGCTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
||
| CDS-3UTR CAA 90 bp | CAAGTCCCCTGGAATGCCTCAAGCAAGACCAAGACAGGTACACTGAGGCAGGCAACATCAGTCATCGTCTaGAGGTCCCTGCACTGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: QVPWNASSKTKTGTLRQATSVIV*RSLHWD Trigger: GTCCCAGTGCAGGGACCTCAAGACGATGACTGATGT...TGCCTGCCTCAGTGTACCTGTCTTGGTCTTGCTTGAGGCATTCCAGGGGACTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
||
| CDS TCA 90 bp | GGGCTCTGGTGGCATAAGCAAGGCGTGGAGCCGCTGAGGGATCTCTaGGAACTTCATCCGCTGAGATTCAAAGATCTGCTGGAGGTACTT | + |
|
Preference number: 5 (lower is better) Translates to: GLWWHKQGVEPLRDL*ELHPLRFKDLLEVL Trigger: AAGTACCTCCAGCAGATCTTTGAATCTCAGCGGATGAAGTTCTCAGAGATCCCTCAGCGGCTCCACGCCTTGCTTATGCCACCAGAGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
||
| CDS-3UTR CAA 90 bp | AGGCCTAGGTCTCCTGACAAGGGCAGGATCAGTGTAGCTGGTCTCCCTCAAGACATTGTGATTTCGATTTaGGACCGCCTGCTGCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: RPRSPDKGRISVAGLPQDIVISI*DRLLLD Trigger: GTCCAGCAGCAGGCGGTCCAAAATCGAAATCACAAT...GTCTTGAGGGAGACCAGCTACACTGATCCTGCCCTTGTCAGGAGACCTAGGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
||
| CDS-3UTR CAA 90 bp | CCAAGTCCCCTGGAATGCCTCAAGCAAGACCAAGACAGGTACACTGAGGCAGGCAGCTTCCGTTTTTGCTaGATGGGACGTTTCAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PSPLECLKQDQDRYTEAGSFRFC*MGRFKA Trigger: GGCCTTGAAACGTCCCATCAAGCAAAAACGGAAGCT...GCCTGCCTCAGTGTACCTGTCTTGGTCTTGCTTGAGGCATTCCAGGGGACTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
||
| CDS-3UTR CAA 90 bp | CAAGGGCAGGATCAGTGTAGCTGGTCTCCCTCAAGACCACCTGACCTCAGGAGGATCTGCTGGAGGTACTaGTCACAGAGAACAAACTCT | + |
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Preference number: 5 (lower is better) Translates to: QGQDQCSWSPSRPPDLRRICWRY*SQRTNS Trigger: AGAGTTTGTTCTCTGTGACAAGTACCTCCAGCAGAT...CCTCCTGAGGTCAGGTGGTCTTGAGGGAGACCAGCTACACTGATCCTGCCCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
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| CDS-3UTR CAA 90 bp | AGGGGCTTTGTCAGTTCTGTGGGTTCAGAGCCCATGCTCAACAGAATCCCCCTGTCGCAGCTTCCGTTTTaGCTTGATGGGACGTTTCAA | + |
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Preference number: 5 (lower is better) Translates to: RGFVSSVGSEPMLNRIPLSQLPF*LDGTFQ Trigger: TTGAAACGTCCCATCAAGCAAAAACGGAAGCTGCGA...CAGGGGGATTCTGTTGAGCATGGGCTCTGAACCCACAGAACTGACAAAGCCCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
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| CDS-3UTR CAA 90 bp | CAAGGGCAGGATCAGTGTAGCTGGTCTCCCTCAAGACCACCTGACCTCAGGAGGTCCGACTTAGCCGGATaGAACGTGTTAGAAATGAAA | + |
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Preference number: 5 (lower is better) Translates to: QGQDQCSWSPSRPPDLRRSDLAG*NVLEMK Trigger: TTTCATTTCTAACACGTTCAATCCGGCTAAGTCGGA...CCTCCTGAGGTCAGGTGGTCTTGAGGGAGACCAGCTACACTGATCCTGCCCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023759.6 |
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| CDS-3UTR CAA 90 bp | CAAGGGCAGGATCAGTGTAGCTGGTCTCCCTCAAGACCACCTGACCTCAGGAGGAACTTTCTCTTTTGCTaGGTGGCGTCATATTTGGAC | + |
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Preference number: 5 (lower is better) Translates to: QGQDQCSWSPSRPPDLRRNFLFC*VASYLD Trigger: GTCCAAATATGACGCCACCAAGCAAAAGAGAAAGTT...CCTCCTGAGGTCAGGTGGTCTTGAGGGAGACCAGCTACACTGATCCTGCCCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
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| CDS GCA 90 bp | CTCGTGAGGGTCCTGGAGCTTGTGTGTTTTAATATACTGCCACAGTaGTTGGATGATCACTGGACGTGTCTGGGTATGGATGCCCAAGAG | + |
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Preference number: 5 (lower is better) Translates to: LVRVLELVCFNILPQ*LDDHWTCLGMDAQE Trigger: CTCTTGGGCATCCATACCCAGACACGTCCAGTGATCATCCAAGCACTGTGGCAGTATATTAAAACACACAAGCTCCAGGACCCTCACGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
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| CDS-3UTR CAA 90 bp | AGGCCTAGGTCTCCTGACAAGGGCAGGATCAGTGTAGCTGGTCTCCCTCAAGACAACTTTCTCTTTTGCTaGGTGGCGTCATATTTGGAC | + |
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Preference number: 5 (lower is better) Translates to: RPRSPDKGRISVAGLPQDNFLFC*VASYLD Trigger: GTCCAAATATGACGCCACCAAGCAAAAGAGAAAGTT...GTCTTGAGGGAGACCAGCTACACTGATCCTGCCCTTGTCAGGAGACCTAGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
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| CDS TCA 90 bp | AAGATCTGCTGGAGGTACTTGTCACAGAGAACAAACTCTCGCTCGTaGGGGTCCTGGAGCTTGTGTGTTTTAATATACTGCCACAGTGCT | + |
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Preference number: 5 (lower is better) Translates to: KICWRYLSQRTNSRS*GSWSLCVLIYCHSA Trigger: AGCACTGTGGCAGTATATTAAAACACACAAGCTCCAGGACCCTCACGAGCGAGAGTTTGTTCTCTGTGACAAGTACCTCCAGCAGATCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
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| CDS CAA 72 bp | ATAGGCCGCCCCGGGCATCGGAGAGCGGTACAGCCCTaGACCCGGCGCCGGGCCCATTCGCACGGGAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: IGRPGHRRAVQP*TRRRAHSHGRP Trigger: GGGCCTCCCGTGCGAATGGGCCCGGCGCCGGGTCAAGGGCTGTACCGCTCTCCGATGCCCGGGGCGGCCTAT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
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| CDS CAA 90 bp | TGGTCTCGGATAGGCCGCCCCGGGCATCGGAGAGCGGTACAGCCCTaGACCCGGCGCCGGGCCCATTCGCACGGGAGGCCCGGGAGTTCC | + |
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Preference number: 6 (lower is better) Translates to: WSRIGRPGHRRAVQP*TRRRAHSHGRPGSS Trigger: GGAACTCCCGGGCCTCCCGTGCGAATGGGCCCGGCGCCGGGTCAAGGGCTGTACCGCTCTCCGATGCCCGGGGCGGCCTATCCGAGACCA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
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| CDS CCA 72 bp | TCCCATGGAAGGTCCCTGAGGTGTCATTCGGCTACCTaGCAGCATACCTGGTCTCGGATAGGCCGCCCCGGG | + |
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Preference number: 6 (lower is better) Translates to: SHGRSLRCHSAT*QHTWSRIGRPG Trigger: CCCGGGGCGGCCTATCCGAGACCAGGTATGCTGCCAGGTAGCCGAATGACACCTCAGGGACCTTCCATGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
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| CDS GCA 72 bp | GCTGGACCTGCTGGATCTGTTGAGGTGCAGGTCTCTTaGGGGACTGGTCCATCCCTGACTGGGCCAGACCAG | + |
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Preference number: 6 (lower is better) Translates to: AGPAGSVEVQVS*GTGPSLTGPDQ Trigger: CTGGTCTGGCCCAGTCAGGGATGGACCAGTCCCGCAAGAGACCTGCACCTCAACAGATCCAGCAGGTCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023759.6 ENSMUST00000228984.2 ENSMUST00000229236.2 ENSMUST00000229845.2 ENSMUST00000230530.2 |
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| CDS CCA 72 bp | CACAGTGCTTGGATGATCACTGGACGTGTCTGGGTATaGATGCCCAAGAGCCGAGCCAGGCGAGGGTCTAAT | + |
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Preference number: 6 (lower is better) Translates to: HSAWMITGRVWV*MPKSRARRGSN Trigger: ATTAGACCCTCGCCTGGCTCGGCTCTTGGGCATCCATACCCAGACACGTCCAGTGATCATCCAAGCACTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
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| CDS CCA 72 bp | GACAAGGCCGCCTTGATGGGACGTTTCAAGGCCTCCTaGATATCTAGCCGCTTCCTCATAATAGTCTGGTCC | + |
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Preference number: 6 (lower is better) Translates to: DKAALMGRFKAS*ISSRFLIIVWS Trigger: GGACCAGACTATTATGAGGAAGCGGCTAGATATCCAGGAGGCCTTGAAACGTCCCATCAAGGCGGCCTTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229236.2 |
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| CDS CAA 72 bp | GAAGAGAACTTTCTCTTTTGCTTGGTGGCGTCATATTaGGACAAGGCCGCGTCCTCCAGGAGCCGGCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: EENFLFCLVASY*DKAASSRSRPS Trigger: AGAAGGCCGGCTCCTGGAGGACGCGGCCTTGTCCAAATATGACGCCACCAAGCAAAAGAGAAAGTTCTCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000230530.2 |
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| CDS TCA 72 bp | TGGCATAAGCAAGGCGTGGAGCCGCTGAGGGATCTCTaGGAACTTCATCCGCTGAGATTCAAAGATCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: WHKQGVEPLRDL*ELHPLRFKDLL Trigger: CAGCAGATCTTTGAATCTCAGCGGATGAAGTTCTCAGAGATCCCTCAGCGGCTCCACGCCTTGCTTATGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
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| CDS GCA 72 bp | GTCTCATGGATCTTGTTGTCTAGAGTGGCGATCTCCTaGTGGCTGGCAGTGGACAACAGGAAAGAGTTCATC | + |
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Preference number: 6 (lower is better) Translates to: VSWILLSRVAIS*WLAVDNRKEFI Trigger: GATGAACTCTTTCCTGTTGTCCACTGCCAGCCAGCAGGAGATCGCCACTCTAGACAACAAGATCCATGAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
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| CDS CCA 72 bp | TGTTTTAATATACTGCCACAGTGCTTGGATGATCACTaGACGTGTCTGGGTATGGATGCCCAAGAGCCGAGC | + |
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Preference number: 6 (lower is better) Translates to: CFNILPQCLDDH*TCLGMDAQEPS Trigger: GCTCGGCTCTTGGGCATCCATACCCAGACACGTCCAGTGATCATCCAAGCACTGTGGCAGTATATTAAAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
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| CDS CAA 72 bp | GAAGAGAACTTTCTCTTTTGCTTGGTGGCGTCATATTaGGACAAGGCCGCCTTGATGGGACGTTTCAAGGCC | + |
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Preference number: 6 (lower is better) Translates to: EENFLFCLVASY*DKAALMGRFKA Trigger: GGCCTTGAAACGTCCCATCAAGGCGGCCTTGTCCAAATATGACGCCACCAAGCAAAAGAGAAAGTTCTCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229236.2 |
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| CDS CCA 72 bp | TTCCGTTTTTGCTTGATGGGACGTTTCAAGGCCTCCTaGATATCTAGCCGCTTCCTCATAATAGTCTGGTCC | + |
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Preference number: 6 (lower is better) Translates to: FRFCLMGRFKAS*ISSRFLIIVWS Trigger: GGACCAGACTATTATGAGGAAGCGGCTAGATATCCAGGAGGCCTTGAAACGTCCCATCAAGCAAAAACGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000230530.2 |
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| CDS CCA 72 bp | TGGAGCTTGTGTGTTTTAATATACTGCCACAGTGCTTaGATGATCACTGGACGTGTCTGGGTATGGATGCCC | + |
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Preference number: 6 (lower is better) Translates to: WSLCVLIYCHSA*MITGRVWVWMP Trigger: GGGCATCCATACCCAGACACGTCCAGTGATCATCCAAGCACTGTGGCAGTATATTAAAACACACAAGCTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
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| CDS CAA 72 bp | CTGGAGCTTGTGTGTTTTAATATACTGCCACAGTGCTaGGATGATCACTGGACGTGTCTGGGTATGGATGCC | + |
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Preference number: 6 (lower is better) Translates to: LELVCFNILPQC*DDHWTCLGMDA Trigger: GGCATCCATACCCAGACACGTCCAGTGATCATCCAAGCACTGTGGCAGTATATTAAAACACACAAGCTCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
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| CDS TCA 72 bp | TGGAGGTACTTGTCACAGAGAACAAACTCTCGCTCGTaGGGGTCCTGGAGCTTGTGTGTTTTAATATACTGC | + |
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Preference number: 6 (lower is better) Translates to: WRYLSQRTNSRS*GSWSLCVLIYC Trigger: GCAGTATATTAAAACACACAAGCTCCAGGACCCTCACGAGCGAGAGTTTGTTCTCTGTGACAAGTACCTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
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| CDS GCA 72 bp | GTCCTGGAGCTTGTGTGTTTTAATATACTGCCACAGTaGTTGGATGATCACTGGACGTGTCTGGGTATGGAT | + |
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Preference number: 6 (lower is better) Translates to: VLELVCFNILPQ*LDDHWTCLGMD Trigger: ATCCATACCCAGACACGTCCAGTGATCATCCAAGCACTGTGGCAGTATATTAAAACACACAAGCTCCAGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023759.6 ENSMUST00000229236.2 |
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