Pregenerated sensors for SMARCB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000902Ensembl transcript IDs: ENSMUST00000000925.10, ENSMUST00000121304.2, ENSMUST00000140388.2, ENSMUST00000146555.2
Found 142 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACAGCATCCAGGTGGTGGGAGCTGTTGGGCAGGGTGGGGACCCACTaGCTGTTCCTCTTGGCCTTCTGCTCCCTGGAGACACAGGAGAAG | + |
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Preference number: 1 (lower is better) Translates to: TASRWWELLGRVGTH*LFLLAFCSLETQEK Trigger: CTTCTCCTGTGTCTCCAGGGAGCAGAAGGCCAAGAGGAACAGCCAGTGGGTCCCCACCCTGCCCAACAGCTCCCACCACCTGGATGCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146555.2 |
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| 3UTR GCA 90 bp | CTGTTGGGCAGGGTGGGGACCCACTGGCTGTTCCTCTTGGCCTTCTaGTCCCTGGAGACACAGGAGAAGAAAGTCACCCCGTCAACCAGG | + |
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Preference number: 1 (lower is better) Translates to: LLGRVGTHWLFLLAF*SLETQEKKVTPSTR Trigger: CCTGGTTGACGGGGTGACTTTCTTCTCCTGTGTCTCCAGGGAGCAGAAGGCCAAGAGGAACAGCCAGTGGGTCCCCACCCTGCCCAACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146555.2 |
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| 3UTR TCA 90 bp | TCTGGTGCCAGCTCAGCTGTCCTCGGATGCTGTATGCAATGGTGGTaGCAAACTCCCCGCCCAAGCCCAGCTCTGAGCACAGCTTCAGGG | + |
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Preference number: 1 (lower is better) Translates to: SGASSAVLGCCMQWW*QTPRPSPALSTASG Trigger: CCCTGAAGCTGTGCTCAGAGCTGGGCTTGGGCGGGGAGTTTGTCACCACCATTGCATACAGCATCCGAGGACAGCTGAGCTGGCACCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140388.2 |
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| 3UTR CCA 90 bp | AAGCGTCTCGCAGCTTCTGCCCGTCGATCTCCATGTCGAGCCGGATaGGCACCAGCACCTCAGGCTGTGACGCATTCTCATGGATCACAG | + |
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Preference number: 1 (lower is better) Translates to: KRLAASARRSPCRAG*APAPQAVTHSHGSQ Trigger: CTGTGATCCATGAGAATGCGTCACAGCCTGAGGTGCTGGTGCCCATCCGGCTCGACATGGAGATCGACGGGCAGAAGCTGCGAGACGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140388.2 |
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| 3UTR TCA 90 bp | ACAAGGGGAAGGTTCTCTTCTTGTCCCGACCCATGCGGTTCCTGTTaGTGGTGGTGGAACAGGGCACAGCATCCAGGTGGTGGGAGCTGT | + |
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Preference number: 1 (lower is better) Translates to: TRGRFSSCPDPCGSC*WWWNRAQHPGGGSC Trigger: ACAGCTCCCACCACCTGGATGCTGTGCCCTGTTCCACCACCATCAACAGGAACCGCATGGGTCGGGACAAGAAGAGAACCTTCCCCTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146555.2 |
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| 3UTR TCA 90 bp | GCTGTATGCAATGGTGGTGACAAACTCCCCGCCCAAGCCCAGCTCTaGGCACAGCTTCAGGGCAAACTTCTCTGGGGAGTTCTCTTTCTC | + |
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Preference number: 1 (lower is better) Translates to: AVCNGGDKLPAQAQL*AQLQGKLLWGVLFL Trigger: GAGAAAGAGAACTCCCCAGAGAAGTTTGCCCTGAAGCTGTGCTCAGAGCTGGGCTTGGGCGGGGAGTTTGTCACCACCATTGCATACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140388.2 |
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| 3UTR TCA 90 bp | GGAGAAGAAAGTCACCCCGTCAACCAGGGCTTAGATTCTGCTCACTaGGACTCCCGACTCATGTCCACCCTGCTACTGTGGGTGCTACTG | + |
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Preference number: 1 (lower is better) Translates to: GEESHPVNQGLDSAH*DSRLMSTLLLWVLL Trigger: CAGTAGCACCCACAGTAGCAGGGTGGACATGAGTCGGGAGTCTCAGTGAGCAGAATCTAAGCCCTGGTTGACGGGGTGACTTTCTTCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146555.2 |
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| 3UTR GCA 90 bp | ATTAGCTTCTCATTCATGTTCCAGGTAAAAGCGTCTCGCAGCTTCTaGCCGTCGATCTCCATGTCGAGCCGGATGGGCACCAGCACCTCA | + |
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Preference number: 1 (lower is better) Translates to: ISFSFMFQVKASRSF*PSISMSSRMGTSTS Trigger: TGAGGTGCTGGTGCCCATCCGGCTCGACATGGAGATCGACGGGCAGAAGCTGCGAGACGCTTTTACCTGGAACATGAATGAGAAGCTAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140388.2 |
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| 3UTR CCA 90 bp | AACTTCTCTGGGGAGTTCTCTTTCTCTGACATGTCCCACTCAAACTaGTCCACCAGGGAGATGTTCCCCACGTGGATGTTCAGCTTGATG | + |
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Preference number: 1 (lower is better) Translates to: NFSGEFSFSDMSHSN*STREMFPTWMFSLM Trigger: CATCAAGCTGAACATCCACGTGGGGAACATCTCCCTGGTGGACCAGTTTGAGTGGGACATGTCAGAGAAAGAGAACTCCCCAGAGAAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140388.2 |
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| 3UTR CCA 90 bp | TGTGGGGTAGGACTCAATCTGCTGTCGAATGGCAGAGGCAATAGCTaGCACAAAAGTCAGTGGATTCAAATCCAGGTCATCACAAAGTAT | + |
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Preference number: 1 (lower is better) Translates to: CGVGLNLLSNGRGNS*HKSQWIQIQVITKY Trigger: ATACTTTGTGATGACCTGGATTTGAATCCACTGACTTTTGTGCCAGCTATTGCCTCTGCCATTCGACAGCAGATTGAGTCCTACCCCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140388.2 |
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| 3UTR-3UTR GCA 90 bp | GTGACAAACTCCCCGCCCAAGCCCAGCTCTGAGCACAGCTTCAGGGCAAACTTCGCGTCTCGCAGCTTCTaGCCGTCGATCTCCATGTCG | + |
|
Preference number: 2 (lower is better) Translates to: VTNSPPKPSSEHSFRANFASRSF*PSISMS Trigger: CGACATGGAGATCGACGGGCAGAAGCTGCGAGACGC...GAAGTTTGCCCTGAAGCTGTGCTCAGAGCTGGGCTTGGGCGGGGAGTTTGTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140388.2 |
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| 3UTR CAA 90 bp | CACAAGGGGAAGGTTCTCTTCTTGTCCCGACCCATGCGGTTCCTGTaGATGGTGGTGGAACAGGGCACAGCATCCAGGTGGTGGGAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: HKGKVLFLSRPMRFL*MVVEQGTASRWWEL Trigger: CAGCTCCCACCACCTGGATGCTGTGCCCTGTTCCACCACCATCAACAGGAACCGCATGGGTCGGGACAAGAAGAGAACCTTCCCCTTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146555.2 |
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| 3UTR-3UTR CCA 90 bp | ACTGAAGGCATAGGTCTTCTGGTGCCAGCTCAGCTGTCCTCGGATGCTGTATGCCCATGTCGAGCCGGATaGGCACCAGCACCTCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: TEGIGLLVPAQLSSDAVCPCRAG*APAPQA Trigger: AGCCTGAGGTGCTGGTGCCCATCCGGCTCGACATGG...GCATACAGCATCCGAGGACAGCTGAGCTGGCACCAGAAGACCTATGCCTTCAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140388.2 |
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| 3UTR-3UTR CCA 90 bp | CACAAGGGGAAGGTTCTCTTCTTGTCCCGACCCATGCGGTTCCTGTTGATGGTGGGCACAGCATCCAGGTaGTGGGAGCTGTTGGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: HKGKVLFLSRPMRFLLMVGTASR*WELLGR Trigger: CCTGCCCAACAGCTCCCACCACCTGGATGCTGTGCC...CACCATCAACAGGAACCGCATGGGTCGGGACAAGAAGAGAACCTTCCCCTTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146555.2 |
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| 3UTR-3UTR TCA 90 bp | ACTGAAGGCATAGGTCTTCTGGTGCCAGCTCAGCTGTCCTCGGATGCTGTATGCCAGCACCTCAGGCTGTaGCGCATTCTCATGGATCAC | + |
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Preference number: 2 (lower is better) Translates to: TEGIGLLVPAQLSSDAVCQHLRL*RILMDH Trigger: GTGATCCATGAGAATGCGTCACAGCCTGAGGTGCTG...GCATACAGCATCCGAGGACAGCTGAGCTGGCACCAGAAGACCTATGCCTTCAGT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140388.2 |
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| 3UTR-3UTR CCA 90 bp | TGGTCCACCAGGGAGATGTTCCCCACGTGGATGTTCAGCTTGATGATGACACGCTGTGACGCATTCTCATaGATCACAGCTGGGTCGTGG | + |
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Preference number: 2 (lower is better) Translates to: WSTREMFPTWMFSLMMTRCDAFS*ITAGSW Trigger: CCACGACCCAGCTGTGATCCATGAGAATGCGTCACA...GCGTGTCATCATCAAGCTGAACATCCACGTGGGGAACATCTCCCTGGTGGACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140388.2 |
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| 3UTR-3UTR GCA 90 bp | AAGGTTCTCTTCTTGTCCCGACCCATGCGGTTCCTGTTGATGGTGGTGGAACAGCCAGGGCTTAGATTCTaGTCACTGAGACTCCCGACT | + |
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Preference number: 2 (lower is better) Translates to: KVLFLSRPMRFLLMVVEQPGLRF*SLRLPT Trigger: AGTCGGGAGTCTCAGTGAGCAGAATCTAAGCCCTGG...CTGTTCCACCACCATCAACAGGAACCGCATGGGTCGGGACAAGAAGAGAACCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146555.2 |
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| 3UTR-3UTR CCA 90 bp | TCCACCAGGGAGATGTTCCCCACGTGGATGTTCAGCTTGATGATGACACGCTGGCTAGGATGCTGTCTGTaGGGTAGGACTCAATCTGCT | + |
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Preference number: 2 (lower is better) Translates to: STREMFPTWMFSLMMTRWLGCCL*GRTQSA Trigger: AGCAGATTGAGTCCTACCCCACAGACAGCATCCTAG...CCAGCGTGTCATCATCAAGCTGAACATCCACGTGGGGAACATCTCCCTGGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140388.2 |
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| 3UTR-3UTR CCA 90 bp | ATGTCCCACTCAAACTGGTCCACCAGGGAGATGTTCCCCACGTGGATGTTCAGCGGCAGAGGCAATAGCTaGCACAAAAGTCAGTGGATT | + |
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Preference number: 2 (lower is better) Translates to: MSHSNWSTREMFPTWMFSGRGNS*HKSQWI Trigger: AATCCACTGACTTTTGTGCCAGCTATTGCCTCTGCC...GCTGAACATCCACGTGGGGAACATCTCCCTGGTGGACCAGTTTGAGTGGGACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140388.2 |
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| 3UTR-3UTR CCA 90 bp | ATAGGTCTTCTGGTGCCAGCTCAGCTGTCCTCGGATGCTGTATGCAATGGTGGTGAGATGTTCCCCACGTaGATGTTCAGCTTGATGATG | + |
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Preference number: 2 (lower is better) Translates to: IGLLVPAQLSSDAVCNGGEMFPT*MFSLMM Trigger: CATCATCAAGCTGAACATCCACGTGGGGAACATCTC...ACCACCATTGCATACAGCATCCGAGGACAGCTGAGCTGGCACCAGAAGACCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140388.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTCTGGGGAGTTCTCTTTCTCTGACATGTCCCACTCAAACTGGTCCACCAGGATTGATCCTCTAGGATaGTGTCTGTGGGGTAGGACT | + |
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Preference number: 2 (lower is better) Translates to: FSGEFSFSDMSHSNWSTRIDPLG*CLWGRT Trigger: AGTCCTACCCCACAGACAGCATCCTAGAGGATCAAT...CCTGGTGGACCAGTTTGAGTGGGACATGTCAGAGAAAGAGAACTCCCCAGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140388.2 |
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| 3UTR-3UTR CCA 90 bp | TGGTACTTTTTATTTAAAAAGTGTTACCAGCCCTGCCTGGGCTCCTATACAAAACCCCAGTCCTCAGGATaGCACCAGCTGTCCCTTTGC | + |
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Preference number: 2 (lower is better) Translates to: WYFLFKKCYQPCLGSYTKPQSSG*HQLSLC Trigger: GCAAAGGGACAGCTGGTGCCATCCTGAGGACTGGGG...TTTTGTATAGGAGCCCAGGCAGGGCTGGTAACACTTTTTAAATAAAAAGTACCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
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| 3UTR-3UTR GCA 90 bp | GGTACTTTTTATTTAAAAAGTGTTACCAGCCCTGCCTGGGCTCCTATACAAAAACACCAGCTGTCCCTTTaGCTTTCTCTTTCCACAGAG | + |
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Preference number: 2 (lower is better) Translates to: GTFYLKSVTSPAWAPIQKHQLSL*LSLSTE Trigger: CTCTGTGGAAAGAGAAAGGCAAAGGGACAGCTGGTG...TTTTTGTATAGGAGCCCAGGCAGGGCTGGTAACACTTTTTAAATAAAAAGTACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
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| 3UTR TCA 72 bp | CATGTCGAGCCGGATGGGCACCAGCACCTCAGGCTGTaGCGCATTCTCATGGATCACAGCTGGGTCGTGGTC | + |
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Preference number: 3 (lower is better) Translates to: HVEPDGHQHLRL*RILMDHSWVVV Trigger: GACCACGACCCAGCTGTGATCCATGAGAATGCGTCACAGCCTGAGGTGCTGGTGCCCATCCGGCTCGACATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140388.2 |
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| 3UTR CCA 72 bp | GCAGCTTCTGCCCGTCGATCTCCATGTCGAGCCGGATaGGCACCAGCACCTCAGGCTGTGACGCATTCTCAT | + |
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Preference number: 3 (lower is better) Translates to: AASARRSPCRAG*APAPQAVTHSH Trigger: ATGAGAATGCGTCACAGCCTGAGGTGCTGGTGCCCATCCGGCTCGACATGGAGATCGACGGGCAGAAGCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140388.2 |
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| 3UTR GCA 72 bp | CTTCTGGTGCCAGCTCAGCTGTCCTCGGATGCTGTATaGAATGGTGGTGACAAACTCCCCGCCCAAGCCCAG | + |
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Preference number: 3 (lower is better) Translates to: LLVPAQLSSDAV*NGGDKLPAQAQ Trigger: CTGGGCTTGGGCGGGGAGTTTGTCACCACCATTGCATACAGCATCCGAGGACAGCTGAGCTGGCACCAGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140388.2 |
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| 3UTR TCA 72 bp | AGCTCAGCTGTCCTCGGATGCTGTATGCAATGGTGGTaGCAAACTCCCCGCCCAAGCCCAGCTCTGAGCACA | + |
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Preference number: 3 (lower is better) Translates to: SSAVLGCCMQWW*QTPRPSPALST Trigger: TGTGCTCAGAGCTGGGCTTGGGCGGGGAGTTTGTCACCACCATTGCATACAGCATCCGAGGACAGCTGAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140388.2 |
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| 3UTR CCA 72 bp | GAGGCACCTAGGAGGCTCCTACCCCAGTCCTCAGGATaGCACCAGCTGTCCCTTTGCCTTTCTCTTTCCACA | + |
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Preference number: 3 (lower is better) Translates to: EAPRRLLPQSSG*HQLSLCLSLST Trigger: TGTGGAAAGAGAAAGGCAAAGGGACAGCTGGTGCCATCCTGAGGACTGGGGTAGGAGCCTCCTAGGTGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
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| 3UTR TCA 72 bp | GGGACAGTGTTGGGGTTTAGCAAATGGAATGTGTGCTaGAGGGAGGCACCTAGGAGGCTCCTACCCCAGTCC | + |
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Preference number: 3 (lower is better) Translates to: GTVLGFSKWNVC*REAPRRLLPQS Trigger: GGACTGGGGTAGGAGCCTCCTAGGTGCCTCCCTTCAGCACACATTCCATTTGCTAAACCCCAACACTGTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
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| 3UTR TCA 72 bp | AGGTTCTCTTCTTGTCCCGACCCATGCGGTTCCTGTTaGTGGTGGTGGAACAGGGCACAGCATCCAGGTGGT | + |
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Preference number: 3 (lower is better) Translates to: RFSSCPDPCGSC*WWWNRAQHPGG Trigger: ACCACCTGGATGCTGTGCCCTGTTCCACCACCATCAACAGGAACCGCATGGGTCGGGACAAGAAGAGAACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146555.2 |
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| 3UTR GCA 72 bp | TCATTCATGTTCCAGGTAAAAGCGTCTCGCAGCTTCTaGCCGTCGATCTCCATGTCGAGCCGGATGGGCACC | + |
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Preference number: 3 (lower is better) Translates to: SFMFQVKASRSF*PSISMSSRMGT Trigger: GGTGCCCATCCGGCTCGACATGGAGATCGACGGGCAGAAGCTGCGAGACGCTTTTACCTGGAACATGAATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140388.2 |
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| 3UTR GCA 72 bp | CTACCCCAGTCCTCAGGATGGCACCAGCTGTCCCTTTaGCTTTCTCTTTCCACAGAGGAAGGAAAGGCAGTC | + |
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Preference number: 3 (lower is better) Translates to: LPQSSGWHQLSL*LSLSTEEGKAV Trigger: GACTGCCTTTCCTTCCTCTGTGGAAAGAGAAAGGCAAAGGGACAGCTGGTGCCATCCTGAGGACTGGGGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
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| 3UTR CCA 72 bp | CACGCTGGTCGGATTGATCCTCTAGGATGCTGTCTGTaGGGTAGGACTCAATCTGCTGTCGAATGGCAGAGG | + |
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Preference number: 3 (lower is better) Translates to: HAGRIDPLGCCL*GRTQSAVEWQR Trigger: CCTCTGCCATTCGACAGCAGATTGAGTCCTACCCCACAGACAGCATCCTAGAGGATCAATCCGACCAGCGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140388.2 |
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| 3UTR CCA 72 bp | CACTCAAACTGGTCCACCAGGGAGATGTTCCCCACGTaGATGTTCAGCTTGATGATGACACGCTGGTCGGAT | + |
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Preference number: 3 (lower is better) Translates to: HSNWSTREMFPT*MFSLMMTRWSD Trigger: ATCCGACCAGCGTGTCATCATCAAGCTGAACATCCACGTGGGGAACATCTCCCTGGTGGACCAGTTTGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140388.2 |
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| 3UTR CCA 72 bp | TCCGGTATTTCGGATGGCAATCTCCACTGTGGGAAGTaGGTTCTCACTGAAGGCATAGGTCTTCTGGTGCCA | + |
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Preference number: 3 (lower is better) Translates to: SGISDGNLHCGK*VLTEGIGLLVP Trigger: TGGCACCAGAAGACCTATGCCTTCAGTGAGAACCCACTTCCCACAGTGGAGATTGCCATCCGAAATACCGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140388.2 |
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| 3UTR CCA 72 bp | GGACTCAATCTGCTGTCGAATGGCAGAGGCAATAGCTaGCACAAAAGTCAGTGGATTCAAATCCAGGTCATC | + |
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Preference number: 3 (lower is better) Translates to: GLNLLSNGRGNS*HKSQWIQIQVI Trigger: GATGACCTGGATTTGAATCCACTGACTTTTGTGCCAGCTATTGCCTCTGCCATTCGACAGCAGATTGAGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140388.2 |
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| CDS-3UTR TCA 90 bp | CGTCTCGCAGCTTCTGCCCGTCGATCTCCATGTCGAGCCGGATGGGCACCAGCACCATGCGGTTCCTGTTaGTGGTGGTGGAACAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: RLAASARRSPCRAGWAPAPCGSC*WWWNRA Trigger: TGCCCTGTTCCACCACCATCAACAGGAACCGCATGG...TGCTGGTGCCCATCCGGCTCGACATGGAGATCGACGGGCAGAAGCTGCGAGACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140388.2 |
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| CDS-3UTR TCA 90 bp | TTGTCCCGACCCATGCGGTTCCTGTTGATGGTGGTGGAACAGGGCACAGCATCCCGTGGGACTCTTCCCTaGGGTAGGTCGGGGGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: LSRPMRFLLMVVEQGTASRGTLP*GRSGAL Trigger: CAGAGCCCCCGACCTACCTCAGGGAAGAGTCCCACG...GGATGCTGTGCCCTGTTCCACCACCATCAACAGGAACCGCATGGGTCGGGACAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146555.2 |
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| CDS-3UTR TCA 90 bp | AGGAGGCTCCTACCCCAGTCCTCAGGATGGCACCAGCTGTCCCTTTGCCTTTCTCCTCCAGCTGAAACTTaGCGGGCTTCTGCCCGAAGG | + |
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Preference number: 4 (lower is better) Translates to: RRLLPQSSGWHQLSLCLSPPAET*RASARR Trigger: CCTTCGGGCAGAAGCCCGTCAAGTTTCAGCTGGAGG...AGAAAGGCAAAGGGACAGCTGGTGCCATCCTGAGGACTGGGGTAGGAGCCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
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| CDS-3UTR CCA 90 bp | AGGAGGCTCCTACCCCAGTCCTCAGGATGGCACCAGCTGTCCCTTTGCCTTTCTACAGCATCCAGGTGGTaGGAGCTGTTGGGCAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: RRLLPQSSGWHQLSLCLSTASRW*ELLGRV Trigger: CACCCTGCCCAACAGCTCCCACCACCTGGATGCTGT...AGAAAGGCAAAGGGACAGCTGGTGCCATCCTGAGGACTGGGGTAGGAGCCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
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| CDS-3UTR CCA 90 bp | GTGACAAACTCCCCGCCCAAGCCCAGCTCTGAGCACAGCTTCAGGGCAAACTTCACAGCATCCAGGTGGTaGGAGCTGTTGGGCAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: VTNSPPKPSSEHSFRANFTASRW*ELLGRV Trigger: CACCCTGCCCAACAGCTCCCACCACCTGGATGCTGT...GAAGTTTGCCCTGAAGCTGTGCTCAGAGCTGGGCTTGGGCGGGGAGTTTGTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140388.2 |
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| CDS-3UTR CCA 90 bp | AGGCTCCTACCCCAGTCCTCAGGATGGCACCAGCTGTCCCTTTGCCTTTCTCTTCCATGTCGAGCCGGATaGGCACCAGCACCTCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: RLLPQSSGWHQLSLCLSLPCRAG*APAPQA Trigger: AGCCTGAGGTGCTGGTGCCCATCCGGCTCGACATGG...AAGAGAAAGGCAAAGGGACAGCTGGTGCCATCCTGAGGACTGGGGTAGGAGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
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| CDS-3UTR TCA 90 bp | AGGAGGCTCCTACCCCAGTCCTCAGGATGGCACCAGCTGTCCCTTTGCCTTTCTCCATGCGGTTCCTGTTaGTGGTGGTGGAACAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: RRLLPQSSGWHQLSLCLSPCGSC*WWWNRA Trigger: TGCCCTGTTCCACCACCATCAACAGGAACCGCATGG...AGAAAGGCAAAGGGACAGCTGGTGCCATCCTGAGGACTGGGGTAGGAGCCTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
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| CDS-3UTR CCA 90 bp | GTCCTCAGGATGGCACCAGCTGTCCCTTTGCCTTTCTCTTTCCACAGAGGAAGGCCATGTCGAGCCGGATaGGCACCAGCACCTCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: VLRMAPAVPLPFSFHRGRPCRAG*APAPQA Trigger: AGCCTGAGGTGCTGGTGCCCATCCGGCTCGACATGG...CCTTCCTCTGTGGAAAGAGAAAGGCAAAGGGACAGCTGGTGCCATCCTGAGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
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| CDS-3UTR CCA 90 bp | CTCCTACCCCAGTCCTCAGGATGGCACCAGCTGTCCCTTTGCCTTTCTCTTTCCAGGCTGGGGCAGTGTTaGCAAGACGCCTCATTCGCC | + |
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Preference number: 4 (lower is better) Translates to: LLPQSSGWHQLSLCLSLSRLGQC*QDASFA Trigger: GGCGAATGAGGCGTCTTGCCAACACTGCCCCAGCCT...GGAAAGAGAAAGGCAAAGGGACAGCTGGTGCCATCCTGAGGACTGGGGTAGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
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| CDS-3UTR TCA 90 bp | GTCCTCAGGATGGCACCAGCTGTCCCTTTGCCTTTCTCTTTCCACAGAGGAAGGCCGTCGTCCTCCAGCTaGAACTTGACGGGCTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: VLRMAPAVPLPFSFHRGRPSSSS*NLTGFC Trigger: GCAGAAGCCCGTCAAGTTTCAGCTGGAGGACGACGG...CCTTCCTCTGTGGAAAGAGAAAGGCAAAGGGACAGCTGGTGCCATCCTGAGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
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| CDS-3UTR GCA 90 bp | ACCCCAGTCCTCAGGATGGCACCAGCTGTCCCTTTGCCTTTCTCTTTCCACAGAGCGTCTCGCAGCTTCTaGCCGTCGATCTCCATGTCG | + |
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Preference number: 4 (lower is better) Translates to: TPVLRMAPAVPLPFSFHRASRSF*PSISMS Trigger: CGACATGGAGATCGACGGGCAGAAGCTGCGAGACGC...TCTGTGGAAAGAGAAAGGCAAAGGGACAGCTGGTGCCATCCTGAGGACTGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
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| CDS-3UTR CCA 90 bp | AGGAGGCTCCTACCCCAGTCCTCAGGATGGCACCAGCTGTCCCTTTGCCTTTCTTCCTTTCTTCCACAGTaGCTAGTCGCCGCCAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RRLLPQSSGWHQLSLCLSSFLPQ*LVAARV Trigger: CACTCTGGCGGCGACTAGCCACTGTGGAAGAAAGGA...AGAAAGGCAAAGGGACAGCTGGTGCCATCCTGAGGACTGGGGTAGGAGCCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
||
| CDS-3UTR CCA 90 bp | ACCCCAGTCCTCAGGATGGCACCAGCTGTCCCTTTGCCTTTCTCTTTCCACAGAAGGGTGGGGACCCACTaGCTGTTCCTCTTGGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TPVLRMAPAVPLPFSFHRRVGTH*LFLLAF Trigger: GAAGGCCAAGAGGAACAGCCAGTGGGTCCCCACCCT...TCTGTGGAAAGAGAAAGGCAAAGGGACAGCTGGTGCCATCCTGAGGACTGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
||
| CDS-3UTR CCA 90 bp | TACCCCAGTCCTCAGGATGGCACCAGCTGTCCCTTTGCCTTTCTCTTTCCACAGAGGGTGGGGACCCACTaGCTGTTCCTCTTGGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: YPSPQDGTSCPFAFLFPQRVGTH*LFLLAF Trigger: GAAGGCCAAGAGGAACAGCCAGTGGGTCCCCACCCT...CTGTGGAAAGAGAAAGGCAAAGGGACAGCTGGTGCCATCCTGAGGACTGGGGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
||
| CDS-3UTR CCA 90 bp | AGTCCTCAGGATGGCACCAGCTGTCCCTTTGCCTTTCTCTTTCCACAGAGGAAGGGCACAGCATCCAGGTaGTGGGAGCTGTTGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SPQDGTSCPFAFLFPQRKGTASR*WELLGR Trigger: CCTGCCCAACAGCTCCCACCACCTGGATGCTGTGCC...CTTCCTCTGTGGAAAGAGAAAGGCAAAGGGACAGCTGGTGCCATCCTGAGGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
||
| CDS-3UTR TCA 90 bp | TTCCACAGAGGAAGGAAAGGCAGTCTGAGATGCTCCGTAGAGGTCGAGCATGGACCTCCAGCTGAAACTTaGCGGGCTTCTGCCCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FHRGRKGSLRCSVEVEHGPPAET*RASARR Trigger: CCTTCGGGCAGAAGCCCGTCAAGTTTCAGCTGGAGG...TCCATGCTCGACCTCTACGGAGCATCTCAGACTGCCTTTCCTTCCTCTGTGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
||
| CDS-3UTR TCA 90 bp | ATAGGTCTTCTGGTGCCAGCTCAGCTGTCCTCGGATGCTGTATGCAATGGTGGTCCTCCAGCTGAAACTTaGCGGGCTTCTGCCCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: IGLLVPAQLSSDAVCNGGPPAET*RASARR Trigger: CCTTCGGGCAGAAGCCCGTCAAGTTTCAGCTGGAGG...ACCACCATTGCATACAGCATCCGAGGACAGCTGAGCTGGCACCAGAAGACCTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140388.2 |
||
| CDS-3UTR TCA 90 bp | TACCCCAGTCCTCAGGATGGCACCAGCTGTCCCTTTGCCTTTCTCTTTCCACAGTCGGGGGCTCTGTGCTaGTGGACACAGCCTTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: YPSPQDGTSCPFAFLFPQSGALC*WTQPCT Trigger: AGTACAAGGCTGTGTCCATCAGCACAGAGCCCCCGA...CTGTGGAAAGAGAAAGGCAAAGGGACAGCTGGTGCCATCCTGAGGACTGGGGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
||
| CDS-3UTR TCA 90 bp | CGTGGTCATCAAAGCACAAGGGGAAGGTTCTCTTCTTGTCCCGACCCATGCGGTTCGGGGGCTCTGTGCTaGTGGACACAGCCTTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: RGHQSTRGRFSSCPDPCGSGALC*WTQPCT Trigger: AGTACAAGGCTGTGTCCATCAGCACAGAGCCCCCGA...ACCGCATGGGTCGGGACAAGAAGAGAACCTTCCCCTTGTGCTTTGATGACCACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146555.2 |
||
| CDS-3UTR CCA 90 bp | CAGTCCTCAGGATGGCACCAGCTGTCCCTTTGCCTTTCTCTTTCCACAGAGGAAACAGCATCCAGGTGGTaGGAGCTGTTGGGCAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QSSGWHQLSLCLSLSTEETASRW*ELLGRV Trigger: CACCCTGCCCAACAGCTCCCACCACCTGGATGCTGT...TTCCTCTGTGGAAAGAGAAAGGCAAAGGGACAGCTGGTGCCATCCTGAGGACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
||
| CDS-3UTR CCA 90 bp | AGGAGGCTCCTACCCCAGTCCTCAGGATGGCACCAGCTGTCCCTTTGCCTTTCTCGCTGGTGGCCAGGGTaGTATATCCATGATCATGTG | + |
|
Preference number: 4 (lower is better) Translates to: RRLLPQSSGWHQLSLCLSRWWPG*YIHDHV Trigger: CACATGATCATGGATATACCACCCTGGCCACCAGCG...AGAAAGGCAAAGGGACAGCTGGTGCCATCCTGAGGACTGGGGTAGGAGCCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121304.2 |
||
| 3UTR CAA 72 bp | AAGGTTCTCTTCTTGTCCCGACCCATGCGGTTCCTGTaGATGGTGGTGGAACAGGGCACAGCATCCAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KVLFLSRPMRFL*MVVEQGTASRW Trigger: CCACCTGGATGCTGTGCCCTGTTCCACCACCATCAACAGGAACCGCATGGGTCGGGACAAGAAGAGAACCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146555.2 |
||
| CDS-3UTR TCA 90 bp | ACCCCAGTCCTCAGGATGGCACCAGCTGTCCCTTTGCCTTTCTCTTTCCACAGACAGCACCTCAGGCTGTaGCGCATTCTCATGGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: TPVLRMAPAVPLPFSFHRQHLRL*RILMDH Trigger: GTGATCCATGAGAATGCGTCACAGCCTGAGGTGCTG...TCTGTGGAAAGAGAAAGGCAAAGGGACAGCTGGTGCCATCCTGAGGACTGGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
||
| CDS-3UTR TCA 90 bp | ACCCCAGTCCTCAGGATGGCACCAGCTGTCCCTTTGCCTTTCTCTTTCCACAGATGTATGCAATGGTGGTaGCAAACTCCCCGCCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TPVLRMAPAVPLPFSFHRCMQWW*QTPRPS Trigger: GCTTGGGCGGGGAGTTTGTCACCACCATTGCATACA...TCTGTGGAAAGAGAAAGGCAAAGGGACAGCTGGTGCCATCCTGAGGACTGGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
||
| CDS-3UTR CCA 90 bp | GGGAGTTCTCTTTCTCTGACATGTCCCACTCAAACTGGTCCACCAGGGAGATGTAGGGTGGGGACCCACTaGCTGTTCCTCTTGGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GSSLSLTCPTQTGPPGRCRVGTH*LFLLAF Trigger: GAAGGCCAAGAGGAACAGCCAGTGGGTCCCCACCCT...ACATCTCCCTGGTGGACCAGTTTGAGTGGGACATGTCAGAGAAAGAGAACTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140388.2 |
||
| CDS-3UTR CCA 90 bp | ATCTCCGGTATTTCGGATGGCAATCTCCACTGTGGGAAGTGGGTTCTCACTGAAGGCACAGCATCCAGGTaGTGGGAGCTGTTGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ISGISDGNLHCGKWVLTEGTASR*WELLGR Trigger: CCTGCCCAACAGCTCCCACCACCTGGATGCTGTGCC...TTCAGTGAGAACCCACTTCCCACAGTGGAGATTGCCATCCGAAATACCGGAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140388.2 |
||
| CDS-3UTR CCA 90 bp | CTCCTACCCCAGTCCTCAGGATGGCACCAGCTGTCCCTTTGCCTTTCTCTTTCCATCACAGCTGGGTCGTaGTCATCAAAGCACAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLPQSSGWHQLSLCLSLSITAGS*SSKHKG Trigger: CCCCTTGTGCTTTGATGACCACGACCCAGCTGTGAT...GGAAAGAGAAAGGCAAAGGGACAGCTGGTGCCATCCTGAGGACTGGGGTAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
||
| CDS-3UTR CCA 90 bp | AGGCTCCTACCCCAGTCCTCAGGATGGCACCAGCTGTCCCTTTGCCTTTCTCTTATCACAGCTGGGTCGTaGTCATCAAAGCACAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RLLPQSSGWHQLSLCLSLITAGS*SSKHKG Trigger: CCCCTTGTGCTTTGATGACCACGACCCAGCTGTGAT...AAGAGAAAGGCAAAGGGACAGCTGGTGCCATCCTGAGGACTGGGGTAGGAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
||
| CDS-3UTR CCA 90 bp | GAGGCTCCTACCCCAGTCCTCAGGATGGCACCAGCTGTCCCTTTGCCTTTCTCTCTAGGATGCTGTCTGTaGGGTAGGACTCAATCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EAPTPVLRMAPAVPLPFSLGCCL*GRTQSA Trigger: AGCAGATTGAGTCCTACCCCACAGACAGCATCCTAG...AGAGAAAGGCAAAGGGACAGCTGGTGCCATCCTGAGGACTGGGGTAGGAGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
||
| CDS-3UTR CCA 90 bp | GAGGCTCCTACCCCAGTCCTCAGGATGGCACCAGCTGTCCCTTTGCCTTTCTCTCTCCACTGTGGGAAGTaGGTTCTCACTGAAGGCATA | + |
|
Preference number: 4 (lower is better) Translates to: EAPTPVLRMAPAVPLPFSLHCGK*VLTEGI Trigger: TATGCCTTCAGTGAGAACCCACTTCCCACAGTGGAG...AGAGAAAGGCAAAGGGACAGCTGGTGCCATCCTGAGGACTGGGGTAGGAGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
||
| 3UTR CAA 72 bp | CCTACCCCAGTCCTCAGGATGGCACCAGCTGTCCCTTaGCCTTTCTCTTTCCACAGAGGAAGGAAAGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PTPVLRMAPAVP*PFSFHRGRKGS Trigger: ACTGCCTTTCCTTCCTCTGTGGAAAGAGAAAGGCAAAGGGACAGCTGGTGCCATCCTGAGGACTGGGGTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
||
| CDS-3UTR TCA 90 bp | TTCTCTTTCCACAGAGGAAGGAAAGGCAGTCTGAGATGCTCCGTAGAGGTCGAGTCGGGGGCTCTGTGCTaGTGGACACAGCCTTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: FSFHRGRKGSLRCSVEVESGALC*WTQPCT Trigger: AGTACAAGGCTGTGTCCATCAGCACAGAGCCCCCGA...CTCGACCTCTACGGAGCATCTCAGACTGCCTTTCCTTCCTCTGTGGAAAGAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
||
| CDS-3UTR TCA 90 bp | ACCCCAGTCCTCAGGATGGCACCAGCTGTCCCTTTGCCTTTCTCTTTCCACAGAACACGCTGGTCGGATTaGTCCTCTAGGATGCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TPVLRMAPAVPLPFSFHRTRWSD*SSRMLS Trigger: AGACAGCATCCTAGAGGATCAATCCGACCAGCGTGT...TCTGTGGAAAGAGAAAGGCAAAGGGACAGCTGGTGCCATCCTGAGGACTGGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
||
| CDS-3UTR GCA 90 bp | GTGCCAGCTCAGCTGTCCTCGGATGCTGTATGCAATGGTGGTGACAAACTCCCCTCTGCCCGAAGGTCTTaGTCAACGCCATCATCATCA | + |
|
Preference number: 4 (lower is better) Translates to: VPAQLSSDAVCNGGDKLPSARRS*STPSSS Trigger: TGATGATGATGGCGTTGAGCAAGACCTTCGGGCAGA...GGGGAGTTTGTCACCACCATTGCATACAGCATCCGAGGACAGCTGAGCTGGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140388.2 |
||
| CDS-3UTR GCA 90 bp | CCAGTCCTCAGGATGGCACCAGCTGTCCCTTTGCCTTTCTCTTTCCACAGAGGAAACTTGACGGGCTTCTaGCCGAAGGTCTTGCTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: PVLRMAPAVPLPFSFHRGNLTGF*PKVLLN Trigger: GTTGAGCAAGACCTTCGGGCAGAAGCCCGTCAAGTT...TCCTCTGTGGAAAGAGAAAGGCAAAGGGACAGCTGGTGCCATCCTGAGGACTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
||
| CDS-3UTR CCA 90 bp | CTCCTACCCCAGTCCTCAGGATGGCACCAGCTGTCCCTTTGCCTTTCTCTTTCCCTCATGGATCACAGCTaGGTCGTGGTCATCAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLPQSSGWHQLSLCLSLSLMDHS*VVVIKA Trigger: TGCTTTGATGACCACGACCCAGCTGTGATCCATGAG...GGAAAGAGAAAGGCAAAGGGACAGCTGGTGCCATCCTGAGGACTGGGGTAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
||
| CDS-3UTR CCA 90 bp | ACCCCAGTCCTCAGGATGGCACCAGCTGTCCCTTTGCCTTTCTCTTTCCACAGATGTGACGCATTCTCATaGATCACAGCTGGGTCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TPVLRMAPAVPLPFSFHRCDAFS*ITAGSW Trigger: CCACGACCCAGCTGTGATCCATGAGAATGCGTCACA...TCTGTGGAAAGAGAAAGGCAAAGGGACAGCTGGTGCCATCCTGAGGACTGGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
||
| CDS-3UTR CCA 90 bp | TACCCCAGTCCTCAGGATGGCACCAGCTGTCCCTTTGCCTTTCTCTTTCCACAGTGTGACGCATTCTCATaGATCACAGCTGGGTCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: YPSPQDGTSCPFAFLFPQCDAFS*ITAGSW Trigger: CCACGACCCAGCTGTGATCCATGAGAATGCGTCACA...CTGTGGAAAGAGAAAGGCAAAGGGACAGCTGGTGCCATCCTGAGGACTGGGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
||
| 3UTR CAA 72 bp | TCGTGGTCATCAAAGCACAAGGGGAAGGTTCTCTTCTaGTCCCGACCCATGCGGTTCCTGTTGATGGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SWSSKHKGKVLF*SRPMRFLLMVV Trigger: CACCACCATCAACAGGAACCGCATGGGTCGGGACAAGAAGAGAACCTTCCCCTTGTGCTTTGATGACCACGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146555.2 |
||
| CDS-3UTR TCA 90 bp | AGTCCTCAGGATGGCACCAGCTGTCCCTTTGCCTTTCTCTTTCCACAGAGGAAGACACGCTGGTCGGATTaGTCCTCTAGGATGCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SPQDGTSCPFAFLFPQRKTRWSD*SSRMLS Trigger: AGACAGCATCCTAGAGGATCAATCCGACCAGCGTGT...CTTCCTCTGTGGAAAGAGAAAGGCAAAGGGACAGCTGGTGCCATCCTGAGGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
||
| CDS-3UTR TCA 90 bp | TACCCCAGTCCTCAGGATGGCACCAGCTGTCCCTTTGCCTTTCTCTTTCCACAGGAAGTGGGTTCTCACTaGAGGCATAGGTCTTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: YPSPQDGTSCPFAFLFPQEVGSH*RHRSSG Trigger: ACCAGAAGACCTATGCCTTCAGTGAGAACCCACTTC...CTGTGGAAAGAGAAAGGCAAAGGGACAGCTGGTGCCATCCTGAGGACTGGGGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
||
| CDS-3UTR GCA 90 bp | TACCCCAGTCCTCAGGATGGCACCAGCTGTCCCTTTGCCTTTCTCTTTCCACAGTCTGCCCGAAGGTCTTaGTCAACGCCATCATCATCA | + |
|
Preference number: 4 (lower is better) Translates to: YPSPQDGTSCPFAFLFPQSARRS*STPSSS Trigger: TGATGATGATGGCGTTGAGCAAGACCTTCGGGCAGA...CTGTGGAAAGAGAAAGGCAAAGGGACAGCTGGTGCCATCCTGAGGACTGGGGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
||
| CDS-3UTR TCA 90 bp | TTGCCTTTCTCTTTCCACAGAGGAAGGAAAGGCAGTCTGAGATGCTCCGTAGAGCAGCACCTCAGGCTGTaGCGCATTCTCATGGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: LPFSFHRGRKGSLRCSVEQHLRL*RILMDH Trigger: GTGATCCATGAGAATGCGTCACAGCCTGAGGTGCTG...CTCTACGGAGCATCTCAGACTGCCTTTCCTTCCTCTGTGGAAAGAGAAAGGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
||
| CDS-3UTR CCA 90 bp | TTGCCTTTCTCTTTCCACAGAGGAAGGAAAGGCAGTCTGAGATGCTCCGTAGAGTCCTTTCTTCCACAGTaGCTAGTCGCCGCCAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LPFSFHRGRKGSLRCSVESFLPQ*LVAARV Trigger: CACTCTGGCGGCGACTAGCCACTGTGGAAGAAAGGA...CTCTACGGAGCATCTCAGACTGCCTTTCCTTCCTCTGTGGAAAGAGAAAGGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
||
| CDS-3UTR CCA 90 bp | CAGTCCTCAGGATGGCACCAGCTGTCCCTTTGCCTTTCTCTTTCCACAGAGGAACTCATGGATCACAGCTaGGTCGTGGTCATCAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QSSGWHQLSLCLSLSTEELMDHS*VVVIKA Trigger: TGCTTTGATGACCACGACCCAGCTGTGATCCATGAG...TTCCTCTGTGGAAAGAGAAAGGCAAAGGGACAGCTGGTGCCATCCTGAGGACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
||
| CDS-3UTR CCA 90 bp | AGGAGGCTCCTACCCCAGTCCTCAGGATGGCACCAGCTGTCCCTTTGCCTTTCTTGGCACAAAAGTCAGTaGATTCAAATCCAGGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: RRLLPQSSGWHQLSLCLSWHKSQ*IQIQVI Trigger: GATGACCTGGATTTGAATCCACTGACTTTTGTGCCA...AGAAAGGCAAAGGGACAGCTGGTGCCATCCTGAGGACTGGGGTAGGAGCCTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
||
| CDS-3UTR CCA 90 bp | ACCCCAGTCCTCAGGATGGCACCAGCTGTCCCTTTGCCTTTCTCTTTCCACAGAGGCAGAGGCAATAGCTaGCACAAAAGTCAGTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: TPVLRMAPAVPLPFSFHRGRGNS*HKSQWI Trigger: AATCCACTGACTTTTGTGCCAGCTATTGCCTCTGCC...TCTGTGGAAAGAGAAAGGCAAAGGGACAGCTGGTGCCATCCTGAGGACTGGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
||
| CDS-3UTR CCA 90 bp | CAGTCCTCAGGATGGCACCAGCTGTCCCTTTGCCTTTCTCTTTCCACAGAGGAACTAGGATGCTGTCTGTaGGGTAGGACTCAATCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QSSGWHQLSLCLSLSTEELGCCL*GRTQSA Trigger: AGCAGATTGAGTCCTACCCCACAGACAGCATCCTAG...TTCCTCTGTGGAAAGAGAAAGGCAAAGGGACAGCTGGTGCCATCCTGAGGACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
||
| CDS-3UTR CCA 90 bp | CAGTCCTCAGGATGGCACCAGCTGTCCCTTTGCCTTTCTCTTTCCACAGAGGAACTCCACTGTGGGAAGTaGGTTCTCACTGAAGGCATA | + |
|
Preference number: 4 (lower is better) Translates to: QSSGWHQLSLCLSLSTEELHCGK*VLTEGI Trigger: TATGCCTTCAGTGAGAACCCACTTCCCACAGTGGAG...TTCCTCTGTGGAAAGAGAAAGGCAAAGGGACAGCTGGTGCCATCCTGAGGACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
||
| CDS-3UTR TCA 90 bp | GAGGCTCCTACCCCAGTCCTCAGGATGGCACCAGCTGTCCCTTTGCCTTTCTCTAGGGTGGTATATCCATaGTCCTTAGTGTTAGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: EAPTPVLRMAPAVPLPFSRVVYP*SLVLGF Trigger: AAAACCTAACACTAAGGATCATGGATATACCACCCT...AGAGAAAGGCAAAGGGACAGCTGGTGCCATCCTGAGGACTGGGGTAGGAGCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000925.10 |
||
| CDS-3UTR TCA 90 bp | TTCTCTTTCCACAGAGGAAGGAAAGGCAGTCTGAGATGCTCCGTAGAGGTCGAGGAAGTGGGTTCTCACTaGAGGCATAGGTCTTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FSFHRGRKGSLRCSVEVEEVGSH*RHRSSG Trigger: ACCAGAAGACCTATGCCTTCAGTGAGAACCCACTTC...CTCGACCTCTACGGAGCATCTCAGACTGCCTTTCCTTCCTCTGTGGAAAGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
||
| CDS-3UTR GCA 90 bp | TTGCCTTTCTCTTTCCACAGAGGAAGGAAAGGCAGTCTGAGATGCTCCGTAGAGAACTTGACGGGCTTCTaGCCGAAGGTCTTGCTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LPFSFHRGRKGSLRCSVENLTGF*PKVLLN Trigger: GTTGAGCAAGACCTTCGGGCAGAAGCCCGTCAAGTT...CTCTACGGAGCATCTCAGACTGCCTTTCCTTCCTCTGTGGAAAGAGAAAGGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
||
| CDS-3UTR CCA 90 bp | CTCCTACCCCAGTCCTCAGGATGGCACCAGCTGTCCCTTTGCCTTTCTCTTTCCTGGCACAAAAGTCAGTaGATTCAAATCCAGGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: LLPQSSGWHQLSLCLSLSWHKSQ*IQIQVI Trigger: GATGACCTGGATTTGAATCCACTGACTTTTGTGCCA...GGAAAGAGAAAGGCAAAGGGACAGCTGGTGCCATCCTGAGGACTGGGGTAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
||
| CDS-3UTR CCA 90 bp | AGTCCTCAGGATGGCACCAGCTGTCCCTTTGCCTTTCTCTTTCCACAGAGGAAGGGCAGAGGCAATAGCTaGCACAAAAGTCAGTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: SPQDGTSCPFAFLFPQRKGRGNS*HKSQWI Trigger: AATCCACTGACTTTTGTGCCAGCTATTGCCTCTGCC...CTTCCTCTGTGGAAAGAGAAAGGCAAAGGGACAGCTGGTGCCATCCTGAGGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
||
| CDS-3UTR CCA 90 bp | TTCTCTTTCCACAGAGGAAGGAAAGGCAGTCTGAGATGCTCCGTAGAGGTCGAGATGTCCCACTCAAACTaGTCCACCAGGGAGATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FSFHRGRKGSLRCSVEVEMSHSN*STREMF Trigger: GAACATCTCCCTGGTGGACCAGTTTGAGTGGGACAT...CTCGACCTCTACGGAGCATCTCAGACTGCCTTTCCTTCCTCTGTGGAAAGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
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| CDS-3UTR GCA 90 bp | CTGCTTCCGACTCTAGACTCTGGGGGACAGTGTTGGGGTTTAGCAAATGGAATGATTGATCCTCTAGGATaGTGTCTGTGGGGTAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: LLPTLDSGGQCWGLANGMIDPLG*CLWGRT Trigger: AGTCCTACCCCACAGACAGCATCCTAGAGGATCAAT...CATTCCATTTGCTAAACCCCAACACTGTCCCCCAGAGTCTAGAGTCGGAAGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
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| CDS-3UTR CCA 90 bp | CATGGTACTTTTTATTTAAAAAGTGTTACCAGCCCTGCCTGGGCTCCTATACAAGGCACAGCATCCAGGTaGTGGGAGCTGTTGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HGTFYLKSVTSPAWAPIQGTASR*WELLGR Trigger: CCTGCCCAACAGCTCCCACCACCTGGATGCTGTGCC...TTGTATAGGAGCCCAGGCAGGGCTGGTAACACTTTTTAAATAAAAAGTACCATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
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| CDS-3UTR CCA 90 bp | TTGCCTTTCTCTTTCCACAGAGGAAGGAAAGGCAGTCTGAGATGCTCCGTAGAGATGTCCCACTCAAACTaGTCCACCAGGGAGATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LPFSFHRGRKGSLRCSVEMSHSN*STREMF Trigger: GAACATCTCCCTGGTGGACCAGTTTGAGTGGGACAT...CTCTACGGAGCATCTCAGACTGCCTTTCCTTCCTCTGTGGAAAGAGAAAGGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
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| CDS-3UTR TCA 90 bp | GGTACTTTTTATTTAAAAAGTGTTACCAGCCCTGCCTGGGCTCCTATACAAAAACCGTCGTCCTCCAGCTaGAACTTGACGGGCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GTFYLKSVTSPAWAPIQKPSSSS*NLTGFC Trigger: GCAGAAGCCCGTCAAGTTTCAGCTGGAGGACGACGG...TTTTTGTATAGGAGCCCAGGCAGGGCTGGTAACACTTTTTAAATAAAAAGTACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
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| CDS-3UTR GCA 90 bp | TGGTACTTTTTATTTAAAAAGTGTTACCAGCCCTGCCTGGGCTCCTATACAAAAGCGTCTCGCAGCTTCTaGCCGTCGATCTCCATGTCG | + |
|
Preference number: 4 (lower is better) Translates to: WYFLFKKCYQPCLGSYTKASRSF*PSISMS Trigger: CGACATGGAGATCGACGGGCAGAAGCTGCGAGACGC...TTTTGTATAGGAGCCCAGGCAGGGCTGGTAACACTTTTTAAATAAAAAGTACCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
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| CDS-3UTR CCA 90 bp | TGGTACTTTTTATTTAAAAAGTGTTACCAGCCCTGCCTGGGCTCCTATACAAAAAGGCTGGGGCAGTGTTaGCAAGACGCCTCATTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: WYFLFKKCYQPCLGSYTKRLGQC*QDASFA Trigger: GGCGAATGAGGCGTCTTGCCAACACTGCCCCAGCCT...TTTTGTATAGGAGCCCAGGCAGGGCTGGTAACACTTTTTAAATAAAAAGTACCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
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| CDS-3UTR TCA 90 bp | GGTACTTTTTATTTAAAAAGTGTTACCAGCCCTGCCTGGGCTCCTATACAAAAATGTATGCAATGGTGGTaGCAAACTCCCCGCCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GTFYLKSVTSPAWAPIQKCMQWW*QTPRPS Trigger: GCTTGGGCGGGGAGTTTGTCACCACCATTGCATACA...TTTTTGTATAGGAGCCCAGGCAGGGCTGGTAACACTTTTTAAATAAAAAGTACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
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| CDS-3UTR GCA 90 bp | TGGTACTTTTTATTTAAAAAGTGTTACCAGCCCTGCCTGGGCTCCTATACAAAATCTGCCCGAAGGTCTTaGTCAACGCCATCATCATCA | + |
|
Preference number: 4 (lower is better) Translates to: WYFLFKKCYQPCLGSYTKSARRS*STPSSS Trigger: TGATGATGATGGCGTTGAGCAAGACCTTCGGGCAGA...TTTTGTATAGGAGCCCAGGCAGGGCTGGTAACACTTTTTAAATAAAAAGTACCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
||
| CDS-3UTR CCA 90 bp | TGGTACTTTTTATTTAAAAAGTGTTACCAGCCCTGCCTGGGCTCCTATACAAAACTCCGGTATTTCGGATaGCAATCTCCACTGTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: WYFLFKKCYQPCLGSYTKLRYFG*QSPLWE Trigger: TTCCCACAGTGGAGATTGCCATCCGAAATACCGGAG...TTTTGTATAGGAGCCCAGGCAGGGCTGGTAACACTTTTTAAATAAAAAGTACCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
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| CDS-3UTR GCA 90 bp | GGTACTTTTTATTTAAAAAGTGTTACCAGCCCTGCCTGGGCTCCTATACAAAAAATTGATCCTCTAGGATaGTGTCTGTGGGGTAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: GTFYLKSVTSPAWAPIQKIDPLG*CLWGRT Trigger: AGTCCTACCCCACAGACAGCATCCTAGAGGATCAAT...TTTTTGTATAGGAGCCCAGGCAGGGCTGGTAACACTTTTTAAATAAAAAGTACC 42% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
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| CDS-3UTR CCA 90 bp | TGGTACTTTTTATTTAAAAAGTGTTACCAGCCCTGCCTGGGCTCCTATACAAAAGAGATGTTCCCCACGTaGATGTTCAGCTTGATGATG | + |
|
Preference number: 4 (lower is better) Translates to: WYFLFKKCYQPCLGSYTKEMFPT*MFSLMM Trigger: CATCATCAAGCTGAACATCCACGTGGGGAACATCTC...TTTTGTATAGGAGCCCAGGCAGGGCTGGTAACACTTTTTAAATAAAAAGTACCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
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| CDS-3UTR CAA 90 bp | CGTCTCGCAGCTTCTGCCCGTCGATCTCCATGTCGAGCCGGATGGGCACCAGCACACTGGCTGTTCCTCTaGGCCTTCTGCTCCCTCGGA | + |
|
Preference number: 5 (lower is better) Translates to: RLAASARRSPCRAGWAPAHWLFL*AFCSLG Trigger: TCCGAGGGAGCAGAAGGCCAAGAGGAACAGCCAGTG...TGCTGGTGCCCATCCGGCTCGACATGGAGATCGACGGGCAGAAGCTGCGAGACG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140388.2 |
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| CDS CCA 90 bp | ACAGCATCCAGGTGGTGGGAGCTGTTGGGCAGGGTGGGGACCCACTaGCTGTTCCTCTTGGCCTTCTGCTCCCTCGGAGCCGATCATGTA | + |
|
Preference number: 5 (lower is better) Translates to: TASRWWELLGRVGTH*LFLLAFCSLGADHV Trigger: TACATGATCGGCTCCGAGGGAGCAGAAGGCCAAGAGGAACAGCCAGTGGGTCCCCACCCTGCCCAACAGCTCCCACCACCTGGATGCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140388.2 |
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| CDS TCA 90 bp | GTCGATCTCCATGTCGAGCCGGATGGGCACCAGCACCTCAGGCTGTaGCGCATTCTCATGGATCACAGCTGGGTCGTGGTCATCAAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: VDLHVEPDGHQHLRL*RILMDHSWVVVIKA Trigger: TGCTTTGATGACCACGACCCAGCTGTGATCCATGAGAATGCGTCACAGCCTGAGGTGCTGGTGCCCATCCGGCTCGACATGGAGATCGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
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| CDS CCA 90 bp | TCGAGCCGGATGGGCACCAGCACCTCAGGCTGTGACGCATTCTCATaGATCACAGCTGGGTCGTGGTCATCAAAGCACAAGGGGAAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: SSRMGTSTSGCDAFS*ITAGSWSSKHKGKV Trigger: AACCTTCCCCTTGTGCTTTGATGACCACGACCCAGCTGTGATCCATGAGAATGCGTCACAGCCTGAGGTGCTGGTGCCCATCCGGCTCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
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| CDS TCA 90 bp | CGGAGCCGATCATGTAGAACTCCCCGTCGTCCTCCAGCTGAAACTTaGCGGGCTTCTGCCCGAAGGTCTTGCTCAACGCCATCATCATCA | + |
|
Preference number: 5 (lower is better) Translates to: RSRSCRTPRRPPAET*RASARRSCSTPSSS Trigger: TGATGATGATGGCGTTGAGCAAGACCTTCGGGCAGAAGCCCGTCAAGTTTCAGCTGGAGGACGACGGGGAGTTCTACATGATCGGCTCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 ENSMUST00000140388.2 |
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| CDS CCA 90 bp | TTCTCCATCTCGGCATCAGTCAGTGTCTCCAGCAGGGGGCACCACTaGTCAGCATCTCCGGTATTTCGGATGGCAATCTCCACTGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: FSISASVSVSSRGHH*SASPVFRMAISTVG Trigger: TCCCACAGTGGAGATTGCCATCCGAAATACCGGAGATGCTGACCAGTGGTGCCCCCTGCTGGAGACACTGACTGATGCCGAGATGGAGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
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| CDS-3UTR CAA 90 bp | TTCTCTTTCCACAGAGGAAGGAAAGGCAGTCTGAGATGCTCCGTAGAGGTCGAGCCCATGCGGTTCCTGTaGATGGTGGTGGAACAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: FSFHRGRKGSLRCSVEVEPMRFL*MVVEQG Trigger: GCCCTGTTCCACCACCATCAACAGGAACCGCATGGG...CTCGACCTCTACGGAGCATCTCAGACTGCCTTTCCTTCCTCTGTGGAAAGAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
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| CDS-3UTR CAA 90 bp | GGGAGTTCTCTTTCTCTGACATGTCCCACTCAAACTGGTCCACCAGGGAGATGTCCCATGCGGTTCCTGTaGATGGTGGTGGAACAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GSSLSLTCPTQTGPPGRCPMRFL*MVVEQG Trigger: GCCCTGTTCCACCACCATCAACAGGAACCGCATGGG...ACATCTCCCTGGTGGACCAGTTTGAGTGGGACATGTCAGAGAAAGAGAACTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140388.2 |
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| CDS-3UTR CAA 90 bp | AGTCCTCAGGATGGCACCAGCTGTCCCTTTGCCTTTCTCTTTCCACAGAGGAAGGGGAAGGTTCTCTTCTaGTCCCGACCCATGCGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SPQDGTSCPFAFLFPQRKGKVLF*SRPMRF Trigger: GAACCGCATGGGTCGGGACAAGAAGAGAACCTTCCC...CTTCCTCTGTGGAAAGAGAAAGGCAAAGGGACAGCTGGTGCCATCCTGAGGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
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| CDS-3UTR CAA 90 bp | CTTCCGACTCTAGACTCTGGGGGACAGTGTTGGGGTTTAGCAAATGGAATGTGTCAGGCTGGGGCAGTGTaGGCAAGACGCCTCATTCGC | + |
|
Preference number: 5 (lower is better) Translates to: LPTLDSGGQCWGLANGMCQAGAV*ARRLIR Trigger: GCGAATGAGGCGTCTTGCCAACACTGCCCCAGCCTG...ACACATTCCATTTGCTAAACCCCAACACTGTCCCCCAGAGTCTAGAGTCGGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
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| CDS-3UTR CAA 90 bp | ACTGAAGGCATAGGTCTTCTGGTGCCAGCTCAGCTGTCCTCGGATGCTGTATGCTTCTGCCCGAAGGTCTaGCTCAACGCCATCATCATC | + |
|
Preference number: 5 (lower is better) Translates to: TEGIGLLVPAQLSSDAVCFCPKV*LNAIII Trigger: GATGATGATGGCGTTGAGCAAGACCTTCGGGCAGAA...GCATACAGCATCCGAGGACAGCTGAGCTGGCACCAGAAGACCTATGCCTTCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140388.2 |
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| CDS-3UTR CAA 90 bp | CTCCTACCCCAGTCCTCAGGATGGCACCAGCTGTCCCTTTGCCTTTCTCTTTCCCTGATGGACACAGCCTaGTACTTCTCGTCATTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LLPQSSGWHQLSLCLSLSLMDTA*YFSSLP Trigger: TGGCAATGACGAGAAGTACAAGGCTGTGTCCATCAG...GGAAAGAGAAAGGCAAAGGGACAGCTGGTGCCATCCTGAGGACTGGGGTAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
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| CDS-3UTR CAA 90 bp | TCTCCGGTATTTCGGATGGCAATCTCCACTGTGGGAAGTGGGTTCTCACTGAAGGGGAAGGTTCTCTTCTaGTCCCGACCCATGCGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SPVFRMAISTVGSGFSLKGKVLF*SRPMRF Trigger: GAACCGCATGGGTCGGGACAAGAAGAGAACCTTCCC...CTTCAGTGAGAACCCACTTCCCACAGTGGAGATTGCCATCCGAAATACCGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140388.2 |
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| CDS TCA 90 bp | AGCCTTGTACTTCTCGTCATTGCCATCCAGGATCTCTTCTACCTCTaGGGCTTTCAGGAGTGTCACGCTGGTGGCCAGGGTGGTATATCC | + |
|
Preference number: 5 (lower is better) Translates to: SLVLLVIAIQDLFYL*GFQECHAGGQGGIS Trigger: GGATATACCACCCTGGCCACCAGCGTGACACTCCTGAAAGCCTCAGAGGTAGAAGAGATCCTGGATGGCAATGACGAGAAGTACAAGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
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| CDS-3UTR CAA 90 bp | ACCCCAGTCCTCAGGATGGCACCAGCTGTCCCTTTGCCTTTCTCTTTCCACAGACTGATGGACACAGCCTaGTACTTCTCGTCATTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: TPVLRMAPAVPLPFSFHRLMDTA*YFSSLP Trigger: TGGCAATGACGAGAAGTACAAGGCTGTGTCCATCAG...TCTGTGGAAAGAGAAAGGCAAAGGGACAGCTGGTGCCATCCTGAGGACTGGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
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| CDS-3UTR CAA 90 bp | CACAAGGGGAAGGTTCTCTTCTTGTCCCGACCCATGCGGTTCCTGTTGATGGTGCTGATGGACACAGCCTaGTACTTCTCGTCATTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: HKGKVLFLSRPMRFLLMVLMDTA*YFSSLP Trigger: TGGCAATGACGAGAAGTACAAGGCTGTGTCCATCAG...CACCATCAACAGGAACCGCATGGGTCGGGACAAGAAGAGAACCTTCCCCTTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146555.2 |
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| CDS-3UTR CAA 90 bp | CTTCCGACTCTAGACTCTGGGGGACAGTGTTGGGGTTTAGCAAATGGAATGTGTGGGAAGGTTCTCTTCTaGTCCCGACCCATGCGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LPTLDSGGQCWGLANGMCGKVLF*SRPMRF Trigger: GAACCGCATGGGTCGGGACAAGAAGAGAACCTTCCC...ACACATTCCATTTGCTAAACCCCAACACTGTCCCCCAGAGTCTAGAGTCGGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
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| CDS-3UTR CAA 90 bp | CTGCTTCCGACTCTAGACTCTGGGGGACAGTGTTGGGGTTTAGCAAATGGAATGTTCTGCCCGAAGGTCTaGCTCAACGCCATCATCATC | + |
|
Preference number: 5 (lower is better) Translates to: LLPTLDSGGQCWGLANGMFCPKV*LNAIII Trigger: GATGATGATGGCGTTGAGCAAGACCTTCGGGCAGAA...CATTCCATTTGCTAAACCCCAACACTGTCCCCCAGAGTCTAGAGTCGGAAGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
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| CDS-3UTR CAA 90 bp | CAGTCCTCAGGATGGCACCAGCTGTCCCTTTGCCTTTCTCTTTCCACAGAGGAAAGTGAGGGGTATCTCTaGTACAGAGAACCTCGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: QSSGWHQLSLCLSLSTEESEGYL*YREPRN Trigger: GTTCCGAGGTTCTCTGTACAAGAGATACCCCTCACT...TTCCTCTGTGGAAAGAGAAAGGCAAAGGGACAGCTGGTGCCATCCTGAGGACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
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| CDS TCA 90 bp | GAGGCTTTCAGGAGTGTCACGCTGGTGGCCAGGGTGGTATATCCATaGTCATGTGACGATGCCACTATTTTCTTCCTTTCTTCCACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: EAFRSVTLVARVVYP*SCDDATIFFLSSTV Trigger: CACTGTGGAAGAAAGGAAGAAAATAGTGGCATCGTCACATGATCATGGATATACCACCCTGGCCACCAGCGTGACACTCCTGAAAGCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121304.2 |
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| CDS-3UTR CAA 90 bp | AGTCCTCAGGATGGCACCAGCTGTCCCTTTGCCTTTCTCTTTCCACAGAGGAAGTTGTACTTCTCGTCATaGCCATCCAGGATCTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SPQDGTSCPFAFLFPQRKLYFSS*PSRISS Trigger: AGAAGAGATCCTGGATGGCAATGACGAGAAGTACAA...CTTCCTCTGTGGAAAGAGAAAGGCAAAGGGACAGCTGGTGCCATCCTGAGGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
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| CDS-3UTR CAA 90 bp | AAGGTTCTCTTCTTGTCCCGACCCATGCGGTTCCTGTTGATGGTGGTGGAACAGTTGTACTTCTCGTCATaGCCATCCAGGATCTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: KVLFLSRPMRFLLMVVEQLYFSS*PSRISS Trigger: AGAAGAGATCCTGGATGGCAATGACGAGAAGTACAA...CTGTTCCACCACCATCAACAGGAACCGCATGGGTCGGGACAAGAAGAGAACCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146555.2 |
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| CDS-3UTR CAA 90 bp | CATGGTACTTTTTATTTAAAAAGTGTTACCAGCCCTGCCTGGGCTCCTATACAACAGGCTGGGGCAGTGTaGGCAAGACGCCTCATTCGC | + |
|
Preference number: 5 (lower is better) Translates to: HGTFYLKSVTSPAWAPIQQAGAV*ARRLIR Trigger: GCGAATGAGGCGTCTTGCCAACACTGCCCCAGCCTG...TTGTATAGGAGCCCAGGCAGGGCTGGTAACACTTTTTAAATAAAAAGTACCATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
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| CDS CCA 90 bp | CTTCTACCTCTGAGGCTTTCAGGAGTGTCACGCTGGTGGCCAGGGTaGTATATCCATGATCATGTGACGATGCCACTATTTTCTTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LLPLRLSGVSRWWPG*YIHDHVTMPLFSSF Trigger: AAAGGAAGAAAATAGTGGCATCGTCACATGATCATGGATATACCACCCTGGCCACCAGCGTGACACTCCTGAAAGCCTCAGAGGTAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121304.2 |
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| CDS-3UTR CAA 90 bp | TTGCCTTTCTCTTTCCACAGAGGAAGGAAAGGCAGTCTGAGATGCTCCGTAGAGTTGTACTTCTCGTCATaGCCATCCAGGATCTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LPFSFHRGRKGSLRCSVELYFSS*PSRISS Trigger: AGAAGAGATCCTGGATGGCAATGACGAGAAGTACAA...CTCTACGGAGCATCTCAGACTGCCTTTCCTTCCTCTGTGGAAAGAGAAAGGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
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| CDS-3UTR CAA 90 bp | GGTACTTTTTATTTAAAAAGTGTTACCAGCCCTGCCTGGGCTCCTATACAAAAACCCATGCGGTTCCTGTaGATGGTGGTGGAACAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GTFYLKSVTSPAWAPIQKPMRFL*MVVEQG Trigger: GCCCTGTTCCACCACCATCAACAGGAACCGCATGGG...TTTTTGTATAGGAGCCCAGGCAGGGCTGGTAACACTTTTTAAATAAAAAGTACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
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| CDS-3UTR CAA 90 bp | CATGGTACTTTTTATTTAAAAAGTGTTACCAGCCCTGCCTGGGCTCCTATACAATTCTGCCCGAAGGTCTaGCTCAACGCCATCATCATC | + |
|
Preference number: 5 (lower is better) Translates to: HGTFYLKSVTSPAWAPIQFCPKV*LNAIII Trigger: GATGATGATGGCGTTGAGCAAGACCTTCGGGCAGAA...TTGTATAGGAGCCCAGGCAGGGCTGGTAACACTTTTTAAATAAAAAGTACCATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
||
| CDS-3UTR CAA 90 bp | CATGGTACTTTTTATTTAAAAAGTGTTACCAGCCCTGCCTGGGCTCCTATACAAAGTGAGGGGTATCTCTaGTACAGAGAACCTCGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: HGTFYLKSVTSPAWAPIQSEGYL*YREPRN Trigger: GTTCCGAGGTTCTCTGTACAAGAGATACCCCTCACT...TTGTATAGGAGCCCAGGCAGGGCTGGTAACACTTTTTAAATAAAAAGTACCATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
||
| CDS CAA 90 bp | ACAGCTGGGTCGTGGTCATCAAAGCACAAGGGGAAGGTTCTCTTCTaGTCCCGACCCATGCGGTTCCTGTTGATGGTGGTGGAACAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: TAGSWSSKHKGKVLF*SRPMRFLLMVVEQG Trigger: GCCCTGTTCCACCACCATCAACAGGAACCGCATGGGTCGGGACAAGAAGAGAACCTTCCCCTTGTGCTTTGATGACCACGACCCAGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
||
| CDS TCA 72 bp | TCATGTAGAACTCCCCGTCGTCCTCCAGCTGAAACTTaGCGGGCTTCTGCCCGAAGGTCTTGCTCAACGCCA | + |
|
Preference number: 6 (lower is better) Translates to: SCRTPRRPPAET*RASARRSCSTP Trigger: TGGCGTTGAGCAAGACCTTCGGGCAGAAGCCCGTCAAGTTTCAGCTGGAGGACGACGGGGAGTTCTACATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 ENSMUST00000140388.2 |
||
| CDS CCA 72 bp | ATGGGCACCAGCACCTCAGGCTGTGACGCATTCTCATaGATCACAGCTGGGTCGTGGTCATCAAAGCACAAG | + |
|
Preference number: 6 (lower is better) Translates to: MGTSTSGCDAFS*ITAGSWSSKHK Trigger: CTTGTGCTTTGATGACCACGACCCAGCTGTGATCCATGAGAATGCGTCACAGCCTGAGGTGCTGGTGCCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
||
| CDS CAA 90 bp | GTCGGGGGCTCTGTGCTGATGGACACAGCCTTGTACTTCTCGTCATaGCCATCCAGGATCTCTTCTACCTCTGAGGCTTTCAGGAGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: VGGSVLMDTALYFSS*PSRISSTSEAFRSV Trigger: GACACTCCTGAAAGCCTCAGAGGTAGAAGAGATCCTGGATGGCAATGACGAGAAGTACAAGGCTGTGTCCATCAGCACAGAGCCCCCGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 ENSMUST00000146555.2 |
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| CDS CCA 72 bp | CTTCTACCTCTGAGGCTTTCAGGAGTGTCACGCTGGTaGCCAGGGTGGTATATCCATGATCATGTGACGATG | + |
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Preference number: 6 (lower is better) Translates to: LLPLRLSGVSRW*PGWYIHDHVTM Trigger: CATCGTCACATGATCATGGATATACCACCCTGGCCACCAGCGTGACACTCCTGAAAGCCTCAGAGGTAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121304.2 |
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| CDS CCA 72 bp | TCTCTTCTACCTCTGAGGCTTTCAGGAGTGTCACGCTaGTGGCCAGGGTGGTATATCCATGATCATGTGACG | + |
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Preference number: 6 (lower is better) Translates to: SLLPLRLSGVSR*WPGWYIHDHVT Trigger: CGTCACATGATCATGGATATACCACCCTGGCCACCAGCGTGACACTCCTGAAAGCCTCAGAGGTAGAAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121304.2 |
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| CDS CAA 72 bp | AGGCTGGGGCAGTGTTGGCAAGACGCCTCATTCGCCTaGTGTTCCTATCTTGATCCCGGATCTTTTTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: RLGQCWQDASFA*CSYLDPGSFSP Trigger: TGGAGAAAAAGATCCGGGATCAAGATAGGAACACAAGGCGAATGAGGCGTCTTGCCAACACTGCCCCAGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
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| CDS CCA 72 bp | CTGAGGCTTTCAGGAGTGTCACGCTGGTGGCCAGGGTaGTATATCCATGATCATGTGACGATGCCACTATTT | + |
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Preference number: 6 (lower is better) Translates to: LRLSGVSRWWPG*YIHDHVTMPLF Trigger: AAATAGTGGCATCGTCACATGATCATGGATATACCACCCTGGCCACCAGCGTGACACTCCTGAAAGCCTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121304.2 |
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| CDS TCA 72 bp | TTGGCAAGACGCCTCATTCGCCTTGTGTTCCTATCTTaGTCCCGGATCTTTTTCTCCATCTCGGCATCAGTC | + |
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Preference number: 6 (lower is better) Translates to: LARRLIRLVFLS*SRIFFSISASV Trigger: GACTGATGCCGAGATGGAGAAAAAGATCCGGGATCAAGATAGGAACACAAGGCGAATGAGGCGTCTTGCCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
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| CDS CAA 72 bp | TCTGTGCTGATGGACACAGCCTTGTACTTCTCGTCATaGCCATCCAGGATCTCTTCTACCTCTGAGGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: SVLMDTALYFSS*PSRISSTSEAF Trigger: GAAAGCCTCAGAGGTAGAAGAGATCCTGGATGGCAATGACGAGAAGTACAAGGCTGTGTCCATCAGCACAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 ENSMUST00000146555.2 |
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| CDS CAA 72 bp | GTTGGCAAGACGCCTCATTCGCCTTGTGTTCCTATCTaGATCCCGGATCTTTTTCTCCATCTCGGCATCAGT | + |
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Preference number: 6 (lower is better) Translates to: VGKTPHSPCVPI*IPDLFLHLGIS Trigger: ACTGATGCCGAGATGGAGAAAAAGATCCGGGATCAAGATAGGAACACAAGGCGAATGAGGCGTCTTGCCAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000925.10 ENSMUST00000121304.2 |
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| CDS TCA 72 bp | AGGAGTGTCACGCTGGTGGCCAGGGTGGTATATCCATaGTCATGTGACGATGCCACTATTTTCTTCCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: RSVTLVARVVYP*SCDDATIFFLS Trigger: AGAAAGGAAGAAAATAGTGGCATCGTCACATGATCATGGATATACCACCCTGGCCACCAGCGTGACACTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121304.2 |
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