Pregenerated sensors for SMARCAL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039354Ensembl transcript IDs: ENSMUST00000047615.15, ENSMUST00000133123.8, ENSMUST00000145868.8, ENSMUST00000152225.2
Found 161 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTGAGCCCTGCTTGGACTaGGACGGGCCGGCAGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPEPCLD*DGPAAE Trigger: CTCTGCTGCCGGCCCGTCCCAGTCCAAGCAGGGCTC...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS-3UTR TCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTTGGAACCGCTGGCACTaGGCCTCCCGGTCTGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPWNRWH*ASRSAE Trigger: CTCAGCAGACCGGGAGGCTCAGTGCCAGCGGTTCCA...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS-3UTR GCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTCTGCGTGTAGAGCTCTaGGGGCCGAGACATGGCGGG | + |
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Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPLRVEL*GPRHGG Trigger: CCCGCCATGTCTCGGCCCGCAGAGCTCTACACGCAG...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS-3UTR TCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTAGGCCTGCTCCCAGGTaGAGCGCACAGAGGAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPRPAPR*SAQRKA Trigger: TGCCTTCCTCTGTGCGCTTCACCTGGGAGCAGGCCT...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS-3UTR TCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTCAGGTTGGAGGAGCCTaGGTAGTCCCAGCCCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPQVGGA*VVPAPR Trigger: CCTTGGGGCTGGGACTACTCAGGCTCCTCCAACCTG...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS-3UTR TCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTCAGCTGTGGAGAAGGTaGGGCCCATGTTGGCGGCTG | + |
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Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPQLWRR*GPCWRL Trigger: CAGCCGCCAACATGGGCCTCACCTTCTCCACAGCTG...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS-3UTR GCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTGTCTGTCCAATGCGGTaGACACGGTCCTCGGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPVCPMR*TRSSAW Trigger: CCAGGCCGAGGACCGTGTGCACCGCATTGGACAGAC...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS-3UTR GCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTTCCTGTGTCCCAGGTTaGCTGGGGTTGACCCTCGCT | + |
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Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPSCVPG*LGLTLA Trigger: AGCGAGGGTCAACCCCAGGCAACCTGGGACACAGGA...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS-3UTR CCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTTTTCCTCTGCTGGGCTaGGCTGAGAACAGCGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPFPLLG*AENSGS Trigger: GCTCCCGCTGTTCTCAGCCCAGCCCAGCAGAGGAAA...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS-3UTR CCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTGGCTCCTGGAGGACTTaGGTTAGGCTTTGGGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPGSWRT*VRLWAG Trigger: GCCTGCCCAAAGCCTAACCCAAGTCCTCCAGGAGCC...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS-3UTR CCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTGGGGTCCCTGGGGAATaGTCCAGAAGAGGAAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPGVPGE*SRRGSS Trigger: GGAGCTTCCTCTTCTGGACCATTCCCCAGGGACCCC...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS-3UTR CCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTACCAGCCTCGTCCAGTaGCTTCAGGGAGACCGTGGA | + |
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Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPTSLVQ*LQGDRG Trigger: TCCACGGTCTCCCTGAAGCCACTGGACGAGGCTGGT...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS-3UTR CCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTTCAGCTCGCCCAGGTTaGAGGAGCCTGAGTAGTCCC | + |
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Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPSARPG*RSLSSP Trigger: GGGACTACTCAGGCTCCTCCAACCTGGGCGAGCTGA...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS-3UTR CCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTCCATCTTGCGCTGCTTaGCCGGAAGCTGGGAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPPSCAA*PEAGRA Trigger: TGCTCTCCCAGCTTCCGGCCAAGCAGCGCAAGATGG...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS-3UTR GCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTTCTGTCCTCCAACACTaGCACCAGCCTCGTCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPSVLQH*HQPRPV Trigger: CACTGGACGAGGCTGGTGGCAGTGTTGGAGGACAGA...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS-3UTR GCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTCACCGAAGAAAGGCCTaGTCCCAGGTGAAGCGCACA | + |
|
Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPHRRKA*SQVKRT Trigger: TGTGCGCTTCACCTGGGAGCAGGCCTTTCTTCGGTG...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS-3UTR GCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTTGCTGCATCCAGGGCTaGCTTAGCCCTGGAGCTGAT | + |
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Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPCCIQG*LSPGAD Trigger: ATCAGCTCCAGGGCTAAGGCAGCCCTGGATGCAGCA...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS-3UTR CCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTCCAGGGTCACTGTCTTaGGCAGTGGGTCCAGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPPGSLS*AVGPAE Trigger: TTCAGCTGGACCCACTGCCCAAGACAGTGACCCTGG...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS-3UTR CCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTGCTATGCAGATGGCTTaGACGGTCTTCCCTAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPAMQMA*TVFPRP Trigger: GGGCCTAGGGAAGACCGTCCAAGCCATCTGCATAGC...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS-3UTR CCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTGGTCTGCTGAGGGAGTaGAGCCATCGATCCGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPGLLRE*SHRSGC Trigger: ACATCCGGATCGATGGCTCCACTCCCTCAGCAGACC...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS-3UTR CCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTCTGGATCAGCACCCCTaGGTTCCAGAAGAGCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPLDQHP*VPEELS Trigger: GCTGAGCTCTTCTGGAACCCAGGGGTGCTGATCCAG...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS-3UTR TCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTGCTCTGTGGCTGTTCTaGCAACTTCTCAGCTCGACG | + |
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Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPALWLF*QLLSST Trigger: CGTCGAGCTGAGAAGTTGTCAGAACAGCCACAGAGC...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS-3UTR TCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTGGCAGTGGGTCCAGCTaGACTTGCTTCAGTTCACGT | + |
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Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPGSGSS*TCFSSR Trigger: ACGTGAACTGAAGCAAGTTCAGCTGGACCCACTGCC...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS-3UTR GCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTAGTTTGTCTGTCCAATaGGGTGCACACGGTCCTCGG | + |
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Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPSLSVQ*GAHGPR Trigger: CCGAGGACCGTGTGCACCGCATTGGACAGACAAACT...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS-3UTR CCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTGCTTTGGGCAGGCTGTaGACATCTCTCCTTGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPALGRL*TSLLGS Trigger: AGACCCAAGGAGAGATGTCCACAGCCTGCCCAAAGC...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS-3UTR TCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTGACGTTTTCTCCAGCTaGGATGCAAATGCCAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPDVFSS*DANARV Trigger: GACCCTGGCATTTGCATCTCAGCTGGAGAAAACGTC...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS-3UTR TCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTTCGATCCGGATGTGTTaGACGTTCTTCCTCTCGAGC | + |
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Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPSIRMC*TFFLSS Trigger: GCTCGAGAGGAAGAACGTTCAACACATCCGGATCGA...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS-3UTR GCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTGGTCATTTCTTTGGCTaGTGCATCCAGGGCTGCCTT | + |
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Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPGHFFG*CIQGCL Trigger: AAGGCAGCCCTGGATGCAGCAGCCAAAGAAATGACC...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS-3UTR GCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTAACAGTGCCACTGTGTaGCCTTTGGACAGCTGGAAC | + |
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Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPNSATV*PLDSWN Trigger: GTTCCAGCTGTCCAAAGGGCACACAGTGGCACTGTT...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS-3UTR CCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTACTTGGGTTAGGCTTTaGGCAGGCTGTGGACATCTC | + |
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Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPTWVRL*AGCGHL Trigger: GAGATGTCCACAGCCTGCCCAAAGCCTAACCCAAGT...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS-3UTR CCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTCACTGTCTTGGGCAGTaGGTCCAGCTGAACTTGCTT | + |
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Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPHCLGQ*VQLNLL Trigger: AAGCAAGTTCAGCTGGACCCACTGCCCAAGACAGTG...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS-3UTR CCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTCTCTGGGCTAAGAGATaGAAGCCACCGAAGAAAGGC | + |
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Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPLWAKR*KPPKKG Trigger: GCCTTTCTTCGGTGGCTTCCATCTCTTAGCCCAGAG...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS-3UTR CCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTCCTTGGTCATTTCTTTaGCTGCTGCATCCAGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPPWSFL*LLHPGL Trigger: CAGCCCTGGATGCAGCAGCCAAAGAAATGACCAAGG...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS-3UTR TCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTCAGGCGGCCTCTTTTTaGTATGGCAAAGCTAACTCC | + |
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Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPQAASF*YGKANS Trigger: GGAGTTAGCTTTGCCATATCAAAAAGAGGCCGCCTG...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS-3UTR GCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTCCACCAGGTAGTGGATaGTCACAGAGTTTGTCTGTC | + |
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Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPPPGSG*SQSLSV Trigger: GACAGACAAACTCTGTGAGCATCCACTACCTGGTGG...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS-3UTR GCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTGGTAGTCATCTGCTGTaGCTTTTGCCACCAGGTAGT | + |
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Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPGSHLL*LLPPGS Trigger: ACTACCTGGTGGCAAAAGGCACAGCAGATGACTACC...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS-3UTR GCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTCCAAAGGTAGTCATCTaGTGTGCCTTTTGCCACCAG | + |
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Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPPKVVI*CAFCHQ Trigger: CTGGTGGCAAAAGGCACAGCAGATGACTACCTTTGG...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS-3UTR CCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTGGTTTGCAGTATGTTTaGGGGTCTCCCTTCTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPGLQYV*GSPFCP Trigger: AGGACAGAAGGGAGACCCCCAAACATACTGCAAACC...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS-3UTR CCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTGGAAAGGTCCGCTTCTaGCACGTCTGCTTTCAGTTT | + |
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Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPGKVRF*HVCFQF Trigger: AAACTGAAAGCAGACGTGCCAGAAGCGGACCTTTCC...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS-3UTR CCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTCACGACCACCAGCAGTaGCCATTCCTTTCGGTAAAA | + |
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Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPHDHQQ*PFLSVK Trigger: TTTTACCGAAAGGAATGGCCACTGCTGGTGGTCGTG...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS-3UTR GCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTTTTCTCCAGCTGAGATaGAAATGCCAGGGTCACTGT | + |
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Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPFLQLR*KCQGHC Trigger: ACAGTGACCCTGGCATTTGCATCTCAGCTGGAGAAA...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS-3UTR GCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTGGTAAAAAGCTGCTATaGAGATGGCTTGGACGGTCT | + |
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Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPGKKLL*RWLGRS Trigger: AGACCGTCCAAGCCATCTGCATAGCAGCTTTTTACC...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS-3UTR CCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTCGTCTGCTTTCAGTTTaGGAGACGTTTTCTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPRLLSV*ETFSPA Trigger: AGCTGGAGAAAACGTCTCCCAAACTGAAAGCAGACG...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
||
| CDS-3UTR CCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTCTGAGGGAAGAAGGTTaGCTTGACAGCAATGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPLREEG*LDSNDL Trigger: CAGATCATTGCTGTCAAGCCAACCTTCTTCCCTCAG...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
||
| CDS-3UTR TCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTCTTCTGCTGTTCTGTTaGAGAAGACAAGGAGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPLLLFC*RRQGEL Trigger: AAGCTCTCCTTGTCTTCTTCAACAGAACAGCAGAAG...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
||
| CDS-3UTR GCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTCTTTCGGTAAAAAGCTaGTATGCAGATGGCTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPLSVKS*YADGLD Trigger: GTCCAAGCCATCTGCATAGCAGCTTTTTACCGAAAG...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS-3UTR GCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTAAAGGGGTTTTTAGCTaGCTCTCCAACTTGCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPKGVFS*LSNLQR Trigger: CCTTTGCAAGTTGGAGAGGCAGCTAAAAACCCCTTT...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS-3UTR CCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTAGAAAGCCTGTGTTTTaGGGTGTGGTTTGCAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPRKPVF*GVVCSM Trigger: CATACTGCAAACCACACCCCAAAACACAGGCTTTCT...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS-3UTR CCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTAGATCTCCCAGATCCTaGGAAATGTTTCCAGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPRSPRS*EMFPEV Trigger: AACCTCTGGAAACATTTCCCAGGATCTGGGAGATCT...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
||
| CDS-3UTR CCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTTTTATAACCCAAAAGTaGTTGGTTAGAGGCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPFITQK*LVRGSW Trigger: CCAGGAGCCTCTAACCAACCACTTTTGGGTTATAAA...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
||
| CDS-3UTR CCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTATACTCGACGACACATaGGATTTTAGCTTCTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPILDDT*DFSFCC Trigger: ACAGCAGAAGCTAAAATCCCATGTGTCGTCGAGTAT...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
||
| CDS-3UTR CCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTTCATTTCCGAGAAATTaGTCTCAGAAAGCCCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPSFPRN*SQKAQL Trigger: AAGCTGGGCTTTCTGAGACCAATTTCTCGGAAATGA...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS-3UTR TCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTGTTCTTGAGGAAGTGTaGTTCATCAATAATGACGAC | + |
|
Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPVLEEV*FINNDD Trigger: GTCGTCATTATTGATGAATCACACTTCCTCAAGAAC...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
||
| CDS-3UTR GCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTTTACTGAGATTCTGTTaGTTGAAAATGGAGGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPLLRFC*LKMEAW Trigger: CCATGCCTCCATTTTCAAGCAACAGAATCTCAGTAA...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
||
| CDS-3UTR GCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTCAAAGAATTCAAATCTaGTTTTCTTTGGCGGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPQRIQI*FSLADC Trigger: GCAGTCCGCCAAAGAAAAGCAGATTTGAATTCTTTG...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
||
| CDS-3UTR CCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTTCCAGAATCACCTTATaGTGTGCAAACACTAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPSRITL*CANTRN Trigger: GTTTCTAGTGTTTGCACACCATAAGGTGATTCTGGA...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS-3UTR TCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTCTGATCAGTAGGAAATaGATTACTGAGATTCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPLISRK*ITEILL Trigger: CAACAGAATCTCAGTAATTCATTTCCTACTGATCAG...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS-3UTR TCA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTCAGTCTTTATGTTCTTaGGGAAGTGTGATTCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPQSLCS*GSVIHQ Trigger: TTGATGAATCACACTTCCTCAAGAACATAAAGACTG...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS GCA 90 bp | GCCCTGGAGCTGATCCGACCAGGGTTGACCACCACCATCTTGCGCTaGTTGGCCGGAAGCTGGGAGAGCACGTCGGATTTGAGGCGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: ALELIRPGLTTTILR*LAGSWESTSDLRRR Trigger: GCGGCGCCTCAAATCCGACGTGCTCTCCCAGCTTCCGGCCAAGCAGCGCAAGATGGTGGTGGTCAACCCTGGTCGGATCAGCTCCAGGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS GCA 90 bp | CCCACTGGCTTTGAAGGCTCCGCTAGGAGATTCAGGAGAGAGCCCTaGTTGGACTGGGACGGGCCGGCAGCAGAGGAGCCTGAAGCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: PTGFEGSARRFRREP*LDWDGPAAEEPEAA Trigger: CGCAGCTTCAGGCTCCTCTGCTGCCGGCCCGTCCCAGTCCAAGCAGGGCTCTCTCCTGAATCTCCTAGCGGAGCCTTCAAAGCCAGTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047615.15 ENSMUST00000133123.8 ENSMUST00000145868.8 ENSMUST00000152225.2 |
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| CDS CCA 90 bp | TTTGAAGGCTCCGCTAGGAGATTCAGGAGAGAGCCCTGCTTGGACTaGGACGGGCCGGCAGCAGAGGAGCCTGAAGCTGCGCTCTGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: FEGSARRFRREPCLD*DGPAAEEPEAALCG Trigger: GCCACAGAGCGCAGCTTCAGGCTCCTCTGCTGCCGGCCCGTCCCAGTCCAAGCAGGGCTCTCTCCTGAATCTCCTAGCGGAGCCTTCAAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047615.15 ENSMUST00000133123.8 ENSMUST00000145868.8 ENSMUST00000152225.2 |
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| CDS CCA 90 bp | CTGGCTTTGAAGGCTCCGCTAGGAGATTCAGGAGAGAGCCCTGCTTaGACTGGGACGGGCCGGCAGCAGAGGAGCCTGAAGCTGCGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LALKAPLGDSGESPA*TGTGRQQRSLKLRS Trigger: AGAGCGCAGCTTCAGGCTCCTCTGCTGCCGGCCCGTCCCAGTCCAAGCAGGGCTCTCTCCTGAATCTCCTAGCGGAGCCTTCAAAGCCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047615.15 ENSMUST00000133123.8 ENSMUST00000145868.8 ENSMUST00000152225.2 |
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| CDS CCA 90 bp | CGACCAGGGTTGACCACCACCATCTTGCGCTGCTTGGCCGGAAGCTaGGAGAGCACGTCGGATTTGAGGCGCCGCAGCATGATTGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RPGLTTTILRCLAGS*ESTSDLRRRSMIAS Trigger: GGAAGCAATCATGCTGCGGCGCCTCAAATCCGACGTGCTCTCCCAGCTTCCGGCCAAGCAGCGCAAGATGGTGGTGGTCAACCCTGGTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS TCA 90 bp | CCCTTTGGACAGCTGGAACCGCTGGCACTGAGCCTCCCGGTCTGCTaGGGGAGTGGAGCCATCGATCCGGATGTGTTGAACGTTCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PFGQLEPLALSLPVC*GSGAIDPDVLNVLP Trigger: AGGAAGAACGTTCAACACATCCGGATCGATGGCTCCACTCCCTCAGCAGACCGGGAGGCTCAGTGCCAGCGGTTCCAGCTGTCCAAAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS CCA 90 bp | ACAGCTGGAACCGCTGGCACTGAGCCTCCCGGTCTGCTGAGGGAGTaGAGCCATCGATCCGGATGTGTTGAACGTTCTTCCTCTCGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: TAGTAGTEPPGLLRE*SHRSGCVERSSSRA Trigger: AGCTCGAGAGGAAGAACGTTCAACACATCCGGATCGATGGCTCCACTCCCTCAGCAGACCGGGAGGCTCAGTGCCAGCGGTTCCAGCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS GCA 90 bp | CTTTTGCCACCAGGTAGTGGATGCTCACAGAGTTTGTCTGTCCAATaGGGTGCACACGGTCCTCGGCCTGGATCAGCACCCCTGGGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LLPPGSGCSQSLSVQ*GAHGPRPGSAPLGS Trigger: GGAACCCAGGGGTGCTGATCCAGGCCGAGGACCGTGTGCACCGCATTGGACAGACAAACTCTGTGAGCATCCACTACCTGGTGGCAAAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS CCA 90 bp | TGCACTTCCCTGTCACAAAGGTCAGGGATGGAGCTGAGGGAAGGCTaGTCTGTCCTCCAACACTGCCACCAGCCTCGTCCAGTGGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: CTSLSQRSGMELREG*SVLQHCHQPRPVAS Trigger: TGAAGCCACTGGACGAGGCTGGTGGCAGTGTTGGAGGACAGACCAGCCTTCCCTCAGCTCCATCCCTGACCTTTGTGACAGGGAAGTGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047615.15 ENSMUST00000133123.8 ENSMUST00000152225.2 |
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| CDS CCA 90 bp | GCCCTTCCCGGTCACCACCACGTTGATGTTCTCTGGGCTAAGAGATaGAAGCCACCGAAGAAAGGCCTGCTCCCAGGTGAAGCGCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: ALPGHHHVDVLWAKR*KPPKKGLLPGEAHR Trigger: TCTGTGCGCTTCACCTGGGAGCAGGCCTTTCTTCGGTGGCTTCCATCTCTTAGCCCAGAGAACATCAACGTGGTGGTGACCGGGAAGGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS TCA 90 bp | AGAGATGAGCATGCACTTCCCTGTCACAAAGGTCAGGGATGGAGCTaGGGGAAGGCTGGTCTGTCCTCCAACACTGCCACCAGCCTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: RDEHALPCHKGQGWS*GKAGLSSNTATSLV Trigger: GACGAGGCTGGTGGCAGTGTTGGAGGACAGACCAGCCTTCCCTCAGCTCCATCCCTGACCTTTGTGACAGGGAAGTGCATGCTCATCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047615.15 ENSMUST00000133123.8 ENSMUST00000152225.2 |
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| CDS TCA 90 bp | CCGCCTCCGAATAGCCGATGTCAACCTCGAAGCGGACTCGAGAGATaGGCATGCACTTCCCTGTCACAAAGGTCAGGGATGGAGCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PPPNSRCQPRSGLER*ACTSLSQRSGMELR Trigger: CCTCAGCTCCATCCCTGACCTTTGTGACAGGGAAGTGCATGCTCATCTCTCGAGTCCGCTTCGAGGTTGACATCGGCTATTCGGAGGCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047615.15 ENSMUST00000133123.8 ENSMUST00000152225.2 |
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| CDS TCA 90 bp | GCCTCCCGGTCTGCTGAGGGAGTGGAGCCATCGATCCGGATGTGTTaGACGTTCTTCCTCTCGAGCTCCTTGGCAACTGCATCCAGAATC | + |
|
Preference number: 5 (lower is better) Translates to: ASRSAEGVEPSIRMC*TFFLSSSLATASRI Trigger: GATTCTGGATGCAGTTGCCAAGGAGCTCGAGAGGAAGAACGTTCAACACATCCGGATCGATGGCTCCACTCCCTCAGCAGACCGGGAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS CCA 90 bp | CTGCTCCCAGGTGAAGCGCACAGAGGAAGGCACGACCACCAGCAGTaGCCATTCCTTTCGGTAAAAAGCTGCTATGCAGATGGCTTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LLPGEAHRGRHDHQQ*PFLSVKSCYADGLD Trigger: GTCCAAGCCATCTGCATAGCAGCTTTTTACCGAAAGGAATGGCCACTGCTGGTGGTCGTGCCTTCCTCTGTGCGCTTCACCTGGGAGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS TCA 90 bp | GCTTCTGGCACGTCTGCTTTCAGTTTGGGAGACGTTTTCTCCAGCTaGGATGCAAATGCCAGGGTCACTGTCTTGGGCAGTGGGTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ASGTSAFSLGDVFSS*DANARVTVLGSGSS Trigger: GCTGGACCCACTGCCCAAGACAGTGACCCTGGCATTTGCATCTCAGCTGGAGAAAACGTCTCCCAAACTGAAAGCAGACGTGCCAGAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS GCA 90 bp | GCCAAAGGTAGTCATCTGCTGTGCCTTTTGCCACCAGGTAGTGGATaGTCACAGAGTTTGTCTGTCCAATGCGGTGCACACGGTCCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: AKGSHLLCLLPPGSG*SQSLSVQCGAHGPR Trigger: CCGAGGACCGTGTGCACCGCATTGGACAGACAAACTCTGTGAGCATCCACTACCTGGTGGCAAAAGGCACAGCAGATGACTACCTTTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS GCA 90 bp | TGGCACGTCTGCTTTCAGTTTGGGAGACGTTTTCTCCAGCTGAGATaGAAATGCCAGGGTCACTGTCTTGGGCAGTGGGTCCAGCTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: WHVCFQFGRRFLQLR*KCQGHCLGQWVQLN Trigger: GTTCAGCTGGACCCACTGCCCAAGACAGTGACCCTGGCATTTGCATCTCAGCTGGAGAAAACGTCTCCCAAACTGAAAGCAGACGTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS CCA 90 bp | CCAGGTTGCCTGGGGTTGACCCTCGCTGGATTTATAACCCAAAAGTaGTTGGTTAGAGGCTCCTGGAGGACTTGGGTTAGGCTTTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: PGCLGLTLAGFITQK*LVRGSWRTWVRLWA Trigger: TGCCCAAAGCCTAACCCAAGTCCTCCAGGAGCCTCTAACCAACCACTTTTGGGTTATAAATCCAGCGAGGGTCAACCCCAGGCAACCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS CCA 90 bp | CATCCACTCCGGAAAGGTCCGCTTCTGGCACGTCTGCTTTCAGTTTaGGAGACGTTTTCTCCAGCTGAGATGCAAATGCCAGGGTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: HPLRKGPLLARLLSV*ETFSPAEMQMPGSL Trigger: CAGTGACCCTGGCATTTGCATCTCAGCTGGAGAAAACGTCTCCCAAACTGAAAGCAGACGTGCCAGAAGCGGACCTTTCCGGAGTGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS CCA 90 bp | GAGGCTAGACACAAGCTTGGCATCCACTCCGGAAAGGTCCGCTTCTaGCACGTCTGCTTTCAGTTTGGGAGACGTTTTCTCCAGCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: EARHKLGIHSGKVRF*HVCFQFGRRFLQLR Trigger: TCTCAGCTGGAGAAAACGTCTCCCAAACTGAAAGCAGACGTGCCAGAAGCGGACCTTTCCGGAGTGGATGCCAAGCTTGTGTCTAGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS TCA 90 bp | AGCAGGCGGCCTCTTTTTGATATGGCAAAGCTAACTCCCTCCCTCTaGAAGGGCATGAGGCTAGACACAAGCTTGGCATCCACTCCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SRRPLFDMAKLTPSL*KGMRLDTSLASTPE Trigger: TTCCGGAGTGGATGCCAAGCTTGTGTCTAGCCTCATGCCCTTTCAGAGGGAGGGAGTTAGCTTTGCCATATCAAAAAGAGGCCGCCTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS CCA 90 bp | GAGACGTTTTCTCCAGCTGAGATGCAAATGCCAGGGTCACTGTCTTaGGCAGTGGGTCCAGCTGAACTTGCTTCAGTTCACGTGACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ETFSPAEMQMPGSLS*AVGPAELASVHVTL Trigger: CAAGGTCACGTGAACTGAAGCAAGTTCAGCTGGACCCACTGCCCAAGACAGTGACCCTGGCATTTGCATCTCAGCTGGAGAAAACGTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS CCA 90 bp | CTCTCGTCCGCTGTCCAGAAGGTCCAGGATATACTCGACGACACATaGGATTTTAGCTTCTGCTGTTCTGTTGAAGAAGACAAGGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LSSAVQKVQDILDDT*DFSFCCSVEEDKES Trigger: GCTCTCCTTGTCTTCTTCAACAGAACAGCAGAAGCTAAAATCCCATGTGTCGTCGAGTATATCCTGGACCTTCTGGACAGCGGACGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS GCA 90 bp | TGTGGCTGTTCTGACAACTTCTCAGCTCGACGGGCCAAAGCTTTTTaGCGATTCTCTTCAATCTTTTTCCTCTGCTCCTCTGTAAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: CGCSDNFSARRAKAF*RFSSIFFLCSSVSG Trigger: GCCACTTACAGAGGAGCAGAGGAAAAAGATTGAAGAGAATCGGCAAAAAGCTTTGGCCCGTCGAGCTGAGAAGTTGTCAGAACAGCCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000047615.15 ENSMUST00000133123.8 ENSMUST00000145868.8 ENSMUST00000152225.2 |
||
| CDS CCA 90 bp | AGCCATCGATCCGGATGTGTTGAACGTTCTTCCTCTCGAGCTCCTTaGCAACTGCATCCAGAATCACCTTATGGTGTGCAAACACTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SHRSGCVERSSSRAP*QLHPESPYGVQTLE Trigger: TTCTAGTGTTTGCACACCATAAGGTGATTCTGGATGCAGTTGCCAAGGAGCTCGAGAGGAAGAACGTTCAACACATCCGGATCGATGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
||
| CDS CCA 90 bp | GTAGGAAATGAATTACTGAGATTCTGTTGCTTGAAAATGGAGGCATaGCCCACTGGCTTTGAAGGCTCCGCTAGGAGATTCAGGAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: VGNELLRFCCLKMEA*PTGFEGSARRFRRE Trigger: CTCTCTCCTGAATCTCCTAGCGGAGCCTTCAAAGCCAGTGGGCCATGCCTCCATTTTCAAGCAACAGAATCTCAGTAATTCATTTCCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047615.15 ENSMUST00000145868.8 ENSMUST00000152225.2 |
||
| CDS-3UTR CAA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTGAAGGCCTTGCTGCCTaGGCCTCTAACTCGGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPEGLAA*ASNSGS Trigger: GGACCCCGAGTTAGAGGCCAAGGCAGCAAGGCCTTC...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS-3UTR CAA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTACCATCTTGCGCTGCTaGGCCGGAAGCTGGGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPTILRC*AGSWES Trigger: GCTCTCCCAGCTTCCGGCCAAGCAGCGCAAGATGGT...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
||
| CDS-3UTR CAA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTGCCACTGTGTGCCCTTaGGACAGCTGGAACCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPATVCP*DSWNRW Trigger: CCAGCGGTTCCAGCTGTCCAAAGGGCACACAGTGGC...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
||
| CDS CCA 90 bp | GTCTTTGTAAAAGAATTGAGATTCTGTTGCTTGAAAATGGAGGCATaGCCCACTGGCTTTGAAGGCTCCGCTAGGAGATTCAGGAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: VFVKELRFCCLKMEA*PTGFEGSARRFRRE Trigger: CTCTCTCCTGAATCTCCTAGCGGAGCCTTCAAAGCCAGTGGGCCATGCCTCCATTTTCAAGCAACAGAATCTCAATTCTTTTACAAAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133123.8 |
||
| CDS-3UTR CAA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTTTGACCACCACCATCTaGCGCTGCTTGGCCGGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPLTTTI*RCLAGS Trigger: GCTTCCGGCCAAGCAGCGCAAGATGGTGGTGGTCAA...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
||
| CDS-3UTR CAA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTGAGAGCACGTCGGATTaGAGGCGCCGCAGCATGATT | + |
|
Preference number: 5 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPESTSD*RRRSMI Trigger: AATCATGCTGCGGCGCCTCAAATCCGACGTGCTCTC...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
||
| CDS-3UTR CAA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTAGGCTAGACACAAGCTaGGCATCCACTCCGGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPRLDTS*ASTPER Trigger: CCTTTCCGGAGTGGATGCCAAGCTTGTGTCTAGCCT...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
||
| CDS-3UTR CAA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTTGGTTTGCAGTATGTTaGGGGGTCTCCCTTCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPWFAVC*GVSLLS Trigger: GGACAGAAGGGAGACCCCCAAACATACTGCAAACCA...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
||
| CDS-3UTR CAA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTGGGAAGAAGGTTGGCTaGACAGCAATGATCTGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPGKKVG*TAMICV Trigger: CACGCAGATCATTGCTGTCAAGCCAACCTTCTTCCC...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
||
| CDS-3UTR CAA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTTCCTTGGTCATTTCTTaGGCTGCTGCATCCAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPSLVIS*AAASRA Trigger: AGCCCTGGATGCAGCAGCCAAAGAAATGACCAAGGA...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
||
| CDS-3UTR CAA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTTTCCTCTCGAGCTCCTaGGCAACTGCATCCAGAATC | + |
|
Preference number: 5 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPFLSSS*ATASRI Trigger: GATTCTGGATGCAGTTGCCAAGGAGCTCGAGAGGAA...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
||
| CDS-3UTR CAA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTGGATGCTCACAGAGTTaGTCTGTCCAATGCGGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPGCSQS*SVQCGA Trigger: TGCACCGCATTGGACAGACAAACTCTGTGAGCATCC...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
||
| CDS GCA 90 bp | TGTCCCAATTATCAAAGAATTCAAATCTGCTTTTCTTTGGCGGACTaGCTTCGTCTTCATCTAAGAGATCTCCCAGATCCTGGGAAATGT | + |
|
Preference number: 5 (lower is better) Translates to: CPNYQRIQICFSLAD*LRLHLRDLPDPGKC Trigger: ACATTTCCCAGGATCTGGGAGATCTCTTAGATGAAGACGAAGGCAGTCCGCCAAAGAAAAGCAGATTTGAATTCTTTGATAATTGGGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
||
| CDS-3UTR CAA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTCTGAGATTCTGTTGCTaGAAAATGGAGGCATGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPLRFCC*KMEAWP Trigger: GGGCCATGCCTCCATTTTCAAGCAACAGAATCTCAG...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
||
| CDS-3UTR CAA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTATAACCCAAAAGTGGTaGGTTAGAGGCTCCTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPITQKW*VRGSWR Trigger: CCTCCAGGAGCCTCTAACCAACCACTTTTGGGTTAT...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
||
| CDS-3UTR CAA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTAGTAGGATCACCCTCTaGGCAACCTTTAGGATAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPSRITL*ATFRIG Trigger: GCCTATCCTAAAGGTTGCCAAGAGGGTGATCCTACT...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
||
| CDS GCA 90 bp | AAGTGTGATTCATCAATAATGACGACTTTGAAAGGGGTTTTTAGCTaGCTCTCCAACTTGCAAAGGAGGTCAAAGCTGACAATATTGACC | + |
|
Preference number: 5 (lower is better) Translates to: KCDSSIMTTLKGVFS*LSNLQRRSKLTILT Trigger: GGTCAATATTGTCAGCTTTGACCTCCTTTGCAAGTTGGAGAGGCAGCTAAAAACCCCTTTCAAAGTCGTCATTATTGATGAATCACACTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
||
| CDS-3UTR CAA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTGCTTCTGCTGTTCTGTaGAAGAAGACAAGGAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPASAVL*KKTRRA Trigger: AGCTCTCCTTGTCTTCTTCAACAGAACAGCAGAAGC...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
||
| CDS-3UTR CAA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTGTCATTTCCGAGAAATaGGTCTCAGAAAGCCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPVISEK*VSESPA Trigger: AGCTGGGCTTTCTGAGACCAATTTCTCGGAAATGAC...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
||
| CDS-3UTR CAA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTTCAAAGCTGACAATATaGACCAAGCCAGCTGTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPSKLTI*TKPAVR Trigger: CCTAACAGCTGGCTTGGTCAATATTGTCAGCTTTGA...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
||
| CDS-3UTR CAA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTTCAGTTCACGTGACCTaGCAATTAGTTTATTGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPSVHVT*QLVYCA Trigger: AGCACAATAAACTAATTGCAAGGTCACGTGAACTGA...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
||
| CDS-3UTR CAA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTTCAATAATGACGACTTaGAAAGGGGTTTTTAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPSIMTT*KGVFSC Trigger: GCAGCTAAAAACCCCTTTCAAAGTCGTCATTATTGA...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
||
| CDS-3UTR CAA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTTGTTTAGTTTTGTCCTaGGTCATTTCTTTGGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPCLVLS*VISLAA Trigger: AGCAGCCAAAGAAATGACCAAGGACAAAACTAAACA...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
||
| CDS-3UTR CAA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTTGTTGCTGTTTAGTTTaGTCCTTGGTCATTTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPCCCLV*SLVISL Trigger: CAAAGAAATGACCAAGGACAAAACTAAACAGCAACA...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
||
| CDS-3UTR CAA 90 bp | CTTTATTTCAATGAGCCCCATGATTTTGTGACTGCTTTCTTTCGTTTCTTTCCTAACTTTAATCTTCTCTaGAATCAGAGGCCAAAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LYFNEPHDFVTAFFRFFPNFNLL*NQRPKV Trigger: TACCTTTGGCCTCTGATTCAAGAGAAGATTAAAGTT...AGGAAAGAAACGAAAGAAAGCAGTCACAAAATCATGGGGCTCATTGAAATAAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
||
| CDS CCA 72 bp | TCCGCTAGGAGATTCAGGAGAGAGCCCTGCTTGGACTaGGACGGGCCGGCAGCAGAGGAGCCTGAAGCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: SARRFRREPCLD*DGPAAEEPEAA Trigger: CGCAGCTTCAGGCTCCTCTGCTGCCGGCCCGTCCCAGTCCAAGCAGGGCTCTCTCCTGAATCTCCTAGCGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047615.15 ENSMUST00000133123.8 ENSMUST00000145868.8 ENSMUST00000152225.2 |
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| CDS CAA 90 bp | CTGGAGCTGATCCGACCAGGGTTGACCACCACCATCTTGCGCTGCTaGGCCGGAAGCTGGGAGAGCACGTCGGATTTGAGGCGCCGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LELIRPGLTTTILRC*AGSWESTSDLRRRS Trigger: GCTGCGGCGCCTCAAATCCGACGTGCTCTCCCAGCTTCCGGCCAAGCAGCGCAAGATGGTGGTGGTCAACCCTGGTCGGATCAGCTCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS CAA 90 bp | GCTGCATCCAGGGCTGCCTTAGCCCTGGAGCTGATCCGACCAGGGTaGACCACCACCATCTTGCGCTGCTTGGCCGGAAGCTGGGAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: AASRAALALELIRPG*TTTILRCLAGSWES Trigger: GCTCTCCCAGCTTCCGGCCAAGCAGCGCAAGATGGTGGTGGTCAACCCTGGTCGGATCAGCTCCAGGGCTAAGGCAGCCCTGGATGCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
||
| CDS CCA 72 bp | AAGGCTCCGCTAGGAGATTCAGGAGAGAGCCCTGCTTaGACTGGGACGGGCCGGCAGCAGAGGAGCCTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: KAPLGDSGESPA*TGTGRQQRSLK Trigger: CTTCAGGCTCCTCTGCTGCCGGCCCGTCCCAGTCCAAGCAGGGCTCTCTCCTGAATCTCCTAGCGGAGCCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047615.15 ENSMUST00000133123.8 ENSMUST00000145868.8 ENSMUST00000152225.2 |
||
| CDS CCA 72 bp | GGTCTGTCCTCCAACACTGCCACCAGCCTCGTCCAGTaGCTTCAGGGAGACCGTGGAGAGTCGCTCGACTGC | + |
|
Preference number: 6 (lower is better) Translates to: GLSSNTATSLVQ*LQGDRGESLDC Trigger: GCAGTCGAGCGACTCTCCACGGTCTCCCTGAAGCCACTGGACGAGGCTGGTGGCAGTGTTGGAGGACAGACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047615.15 ENSMUST00000133123.8 ENSMUST00000152225.2 |
||
| CDS CAA 72 bp | GAAGGCTCCGCTAGGAGATTCAGGAGAGAGCCCTGCTaGGACTGGGACGGGCCGGCAGCAGAGGAGCCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: EGSARRFRREPC*DWDGPAAEEPE Trigger: TTCAGGCTCCTCTGCTGCCGGCCCGTCCCAGTCCAAGCAGGGCTCTCTCCTGAATCTCCTAGCGGAGCCTTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047615.15 ENSMUST00000133123.8 ENSMUST00000145868.8 ENSMUST00000152225.2 |
||
| CDS CAA 72 bp | AGGGCTGCCTTAGCCCTGGAGCTGATCCGACCAGGGTaGACCACCACCATCTTGCGCTGCTTGGCCGGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: RAALALELIRPG*TTTILRCLAGS Trigger: GCTTCCGGCCAAGCAGCGCAAGATGGTGGTGGTCAACCCTGGTCGGATCAGCTCCAGGGCTAAGGCAGCCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
||
| CDS CAA 90 bp | ACTGGCTTTGAAGGCTCCGCTAGGAGATTCAGGAGAGAGCCCTGCTaGGACTGGGACGGGCCGGCAGCAGAGGAGCCTGAAGCTGCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: TGFEGSARRFRREPC*DWDGPAAEEPEAAL Trigger: GAGCGCAGCTTCAGGCTCCTCTGCTGCCGGCCCGTCCCAGTCCAAGCAGGGCTCTCTCCTGAATCTCCTAGCGGAGCCTTCAAAGCCAGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047615.15 ENSMUST00000133123.8 ENSMUST00000145868.8 ENSMUST00000152225.2 |
||
| CDS CAA 90 bp | GCCTTAGCCCTGGAGCTGATCCGACCAGGGTTGACCACCACCATCTaGCGCTGCTTGGCCGGAAGCTGGGAGAGCACGTCGGATTTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: ALALELIRPGLTTTI*RCLAGSWESTSDLR Trigger: CCTCAAATCCGACGTGCTCTCCCAGCTTCCGGCCAAGCAGCGCAAGATGGTGGTGGTCAACCCTGGTCGGATCAGCTCCAGGGCTAAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
||
| CDS TCA 72 bp | CAGCTGGAACCGCTGGCACTGAGCCTCCCGGTCTGCTaGGGGAGTGGAGCCATCGATCCGGATGTGTTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: QLEPLALSLPVC*GSGAIDPDVLN Trigger: GTTCAACACATCCGGATCGATGGCTCCACTCCCTCAGCAGACCGGGAGGCTCAGTGCCAGCGGTTCCAGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
||
| CDS CCA 72 bp | TTGACCACCACCATCTTGCGCTGCTTGGCCGGAAGCTaGGAGAGCACGTCGGATTTGAGGCGCCGCAGCATG | + |
|
Preference number: 6 (lower is better) Translates to: LTTTILRCLAGS*ESTSDLRRRSM Trigger: CATGCTGCGGCGCCTCAAATCCGACGTGCTCTCCCAGCTTCCGGCCAAGCAGCGCAAGATGGTGGTGGTCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
||
| CDS CAA 72 bp | CGCTGCTTGGCCGGAAGCTGGGAGAGCACGTCGGATTaGAGGCGCCGCAGCATGATTGCTTCCTCTAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RCLAGSWESTSD*RRRSMIASSSS Trigger: GCTGCTAGAGGAAGCAATCATGCTGCGGCGCCTCAAATCCGACGTGCTCTCCCAGCTTCCGGCCAAGCAGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
||
| CDS CCA 72 bp | GGGTCTTCCATAGCCCCGTCGTTTCCTCTGCTGGGCTaGGCTGAGAACAGCGGGAGCTGTGAGGTCTCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: GSSIAPSFPLLG*AENSGSCEVSD Trigger: ATCAGAGACCTCACAGCTCCCGCTGTTCTCAGCCCAGCCCAGCAGAGGAAACGACGGGGCTATGGAAGACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
||
| CDS CCA 72 bp | ACCGCTGGCACTGAGCCTCCCGGTCTGCTGAGGGAGTaGAGCCATCGATCCGGATGTGTTGAACGTTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: TAGTEPPGLLRE*SHRSGCVERSS Trigger: GGAAGAACGTTCAACACATCCGGATCGATGGCTCCACTCCCTCAGCAGACCGGGAGGCTCAGTGCCAGCGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
||
| CDS CAA 72 bp | ATCCGACCAGGGTTGACCACCACCATCTTGCGCTGCTaGGCCGGAAGCTGGGAGAGCACGTCGGATTTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: IRPGLTTTILRC*AGSWESTSDLR Trigger: CCTCAAATCCGACGTGCTCTCCCAGCTTCCGGCCAAGCAGCGCAAGATGGTGGTGGTCAACCCTGGTCGGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
||
| CDS CAA 90 bp | ACCATCTTGCGCTGCTTGGCCGGAAGCTGGGAGAGCACGTCGGATTaGAGGCGCCGCAGCATGATTGCTTCCTCTAGCAGCAGCTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: TILRCLAGSWESTSD*RRRSMIASSSSSFS Trigger: GCTGAAGCTGCTGCTAGAGGAAGCAATCATGCTGCGGCGCCTCAAATCCGACGTGCTCTCCCAGCTTCCGGCCAAGCAGCGCAAGATGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
||
| CDS GCA 72 bp | GCGTGTAGAGCTCTGCGGGCCGAGACATGGCGGGTGTaGCTGACAGTAGGATCACCCTCTTGGCAACCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: ACRALRAETWRV*LTVGSPSWQPL Trigger: TAAAGGTTGCCAAGAGGGTGATCCTACTGTCAGGCACACCCGCCATGTCTCGGCCCGCAGAGCTCTACACGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
||
| CDS GCA 72 bp | CCAGGTAGTGGATGCTCACAGAGTTTGTCTGTCCAATaGGGTGCACACGGTCCTCGGCCTGGATCAGCACCC | + |
|
Preference number: 6 (lower is better) Translates to: PGSGCSQSLSVQ*GAHGPRPGSAP Trigger: GGGTGCTGATCCAGGCCGAGGACCGTGTGCACCGCATTGGACAGACAAACTCTGTGAGCATCCACTACCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
||
| CDS CCA 72 bp | GGGTTAGGCTTTGGGCAGGCTGTGGACATCTCTCCTTaGGTCTTCCATAGCCCCGTCGTTTCCTCTGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: GLGFGQAVDISP*VFHSPVVSSAG Trigger: CCCAGCAGAGGAAACGACGGGGCTATGGAAGACCCAAGGAGAGATGTCCACAGCCTGCCCAAAGCCTAACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
||
| CDS CCA 72 bp | CTGTCACAAAGGTCAGGGATGGAGCTGAGGGAAGGCTaGTCTGTCCTCCAACACTGCCACCAGCCTCGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LSQRSGMELREG*SVLQHCHQPRP Trigger: TGGACGAGGCTGGTGGCAGTGTTGGAGGACAGACCAGCCTTCCCTCAGCTCCATCCCTGACCTTTGTGACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047615.15 ENSMUST00000133123.8 ENSMUST00000152225.2 |
||
| CDS CCA 72 bp | GCGGCCCTTCCCGGTCACCACCACGTTGATGTTCTCTaGGCTAAGAGATGGAAGCCACCGAAGAAAGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: AALPGHHHVDVL*AKRWKPPKKGL Trigger: CAGGCCTTTCTTCGGTGGCTTCCATCTCTTAGCCCAGAGAACATCAACGTGGTGGTGACCGGGAAGGGCCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
||
| CDS CAA 72 bp | CCAGCTGTTAGGCGGCCCTTCCCGGTCACCACCACGTaGATGTTCTCTGGGCTAAGAGATGGAAGCCACCGA | + |
|
Preference number: 6 (lower is better) Translates to: PAVRRPFPVTTT*MFSGLRDGSHR Trigger: TCGGTGGCTTCCATCTCTTAGCCCAGAGAACATCAACGTGGTGGTGACCGGGAAGGGCCGCCTAACAGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS CAA 90 bp | TTGACCAAGCCAGCTGTTAGGCGGCCCTTCCCGGTCACCACCACGTaGATGTTCTCTGGGCTAAGAGATGGAAGCCACCGAAGAAAGGCC | + |
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Preference number: 6 (lower is better) Translates to: LTKPAVRRPFPVTTT*MFSGLRDGSHRRKA Trigger: GGCCTTTCTTCGGTGGCTTCCATCTCTTAGCCCAGAGAACATCAACGTGGTGGTGACCGGGAAGGGCCGCCTAACAGCTGGCTTGGTCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS CAA 72 bp | GACATGGCGGGTGTGCCTGACAGTAGGATCACCCTCTaGGCAACCTTTAGGATAGGCACAGCTGCTCGGCAG | + |
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Preference number: 6 (lower is better) Translates to: DMAGVPDSRITL*ATFRIGTAARQ Trigger: CTGCCGAGCAGCTGTGCCTATCCTAAAGGTTGCCAAGAGGGTGATCCTACTGTCAGGCACACCCGCCATGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS CAA 72 bp | ACGACCAGATCAGCTGTGGAGAAGGTGAGGCCCATGTaGGCGGCTGTGATGGACAACAGTGCCACTGTGTGC | + |
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Preference number: 6 (lower is better) Translates to: TTRSAVEKVRPM*AAVMDNSATVC Trigger: GCACACAGTGGCACTGTTGTCCATCACAGCCGCCAACATGGGCCTCACCTTCTCCACAGCTGATCTGGTCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS CAA 90 bp | TCAGCAAACACGACCAGATCAGCTGTGGAGAAGGTGAGGCCCATGTaGGCGGCTGTGATGGACAACAGTGCCACTGTGTGCCCTTTGGAC | + |
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Preference number: 6 (lower is better) Translates to: SANTTRSAVEKVRPM*AAVMDNSATVCPLD Trigger: GTCCAAAGGGCACACAGTGGCACTGTTGTCCATCACAGCCGCCAACATGGGCCTCACCTTCTCCACAGCTGATCTGGTCGTGTTTGCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS TCA 72 bp | TCTGCTGAGGGAGTGGAGCCATCGATCCGGATGTGTTaGACGTTCTTCCTCTCGAGCTCCTTGGCAACTGCA | + |
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Preference number: 6 (lower is better) Translates to: SAEGVEPSIRMC*TFFLSSSLATA Trigger: TGCAGTTGCCAAGGAGCTCGAGAGGAAGAACGTTCAACACATCCGGATCGATGGCTCCACTCCCTCAGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS CCA 72 bp | TTGGTTAGAGGCTCCTGGAGGACTTGGGTTAGGCTTTaGGCAGGCTGTGGACATCTCTCCTTGGGTCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: LVRGSWRTWVRL*AGCGHLSLGLP Trigger: TGGAAGACCCAAGGAGAGATGTCCACAGCCTGCCCAAAGCCTAACCCAAGTCCTCCAGGAGCCTCTAACCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS CCA 72 bp | GGTCACCACCACGTTGATGTTCTCTGGGCTAAGAGATaGAAGCCACCGAAGAAAGGCCTGCTCCCAGGTGAA | + |
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Preference number: 6 (lower is better) Translates to: GHHHVDVLWAKR*KPPKKGLLPGE Trigger: TTCACCTGGGAGCAGGCCTTTCTTCGGTGGCTTCCATCTCTTAGCCCAGAGAACATCAACGTGGTGGTGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS CAA 72 bp | GGAATGGTCCAGAAGAGGAAGCTCCTGTGTCCCAGGTaGCCTGGGGTTGACCCTCGCTGGATTTATAACCCA | + |
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Preference number: 6 (lower is better) Translates to: GMVQKRKLLCPR*PGVDPRWIYNP Trigger: TGGGTTATAAATCCAGCGAGGGTCAACCCCAGGCAACCTGGGACACAGGAGCTTCCTCTTCTGGACCATTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS CAA 90 bp | TTTAGCTGCCTCTCCAACTTGCAAAGGAGGTCAAAGCTGACAATATaGACCAAGCCAGCTGTTAGGCGGCCCTTCCCGGTCACCACCACG | + |
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Preference number: 6 (lower is better) Translates to: FSCLSNLQRRSKLTI*TKPAVRRPFPVTTT Trigger: CGTGGTGGTGACCGGGAAGGGCCGCCTAACAGCTGGCTTGGTCAATATTGTCAGCTTTGACCTCCTTTGCAAGTTGGAGAGGCAGCTAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS CCA 72 bp | TCTCCAGCTGAGATGCAAATGCCAGGGTCACTGTCTTaGGCAGTGGGTCCAGCTGAACTTGCTTCAGTTCAC | + |
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Preference number: 6 (lower is better) Translates to: SPAEMQMPGSLS*AVGPAELASVH Trigger: GTGAACTGAAGCAAGTTCAGCTGGACCCACTGCCCAAGACAGTGACCCTGGCATTTGCATCTCAGCTGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS CCA 72 bp | CACAAGCTTGGCATCCACTCCGGAAAGGTCCGCTTCTaGCACGTCTGCTTTCAGTTTGGGAGACGTTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: HKLGIHSGKVRF*HVCFQFGRRFL Trigger: GAGAAAACGTCTCCCAAACTGAAAGCAGACGTGCCAGAAGCGGACCTTTCCGGAGTGGATGCCAAGCTTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS CCA 72 bp | GGTGAAGCGCACAGAGGAAGGCACGACCACCAGCAGTaGCCATTCCTTTCGGTAAAAAGCTGCTATGCAGAT | + |
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Preference number: 6 (lower is better) Translates to: GEAHRGRHDHQQ*PFLSVKSCYAD Trigger: ATCTGCATAGCAGCTTTTTACCGAAAGGAATGGCCACTGCTGGTGGTCGTGCCTTCCTCTGTGCGCTTCACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS CAA 72 bp | CTCTCCAACTTGCAAAGGAGGTCAAAGCTGACAATATaGACCAAGCCAGCTGTTAGGCGGCCCTTCCCGGTC | + |
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Preference number: 6 (lower is better) Translates to: LSNLQRRSKLTI*TKPAVRRPFPV Trigger: GACCGGGAAGGGCCGCCTAACAGCTGGCTTGGTCAATATTGTCAGCTTTGACCTCCTTTGCAAGTTGGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS GCA 72 bp | TGCTTTCAGTTTGGGAGACGTTTTCTCCAGCTGAGATaGAAATGCCAGGGTCACTGTCTTGGGCAGTGGGTC | + |
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Preference number: 6 (lower is better) Translates to: CFQFGRRFLQLR*KCQGHCLGQWV Trigger: GACCCACTGCCCAAGACAGTGACCCTGGCATTTGCATCTCAGCTGGAGAAAACGTCTCCCAAACTGAAAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS GCA 72 bp | CTGTTTAGTTTTGTCCTTGGTCATTTCTTTGGCTGCTaGATCCAGGGCTGCCTTAGCCCTGGAGCTGATCCG | + |
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Preference number: 6 (lower is better) Translates to: LFSFVLGHFFGC*IQGCLSPGADP Trigger: CGGATCAGCTCCAGGGCTAAGGCAGCCCTGGATGCAGCAGCCAAAGAAATGACCAAGGACAAAACTAAACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS CCA 72 bp | CTGGGGTTGACCCTCGCTGGATTTATAACCCAAAAGTaGTTGGTTAGAGGCTCCTGGAGGACTTGGGTTAGG | + |
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Preference number: 6 (lower is better) Translates to: LGLTLAGFITQK*LVRGSWRTWVR Trigger: CCTAACCCAAGTCCTCCAGGAGCCTCTAACCAACCACTTTTGGGTTATAAATCCAGCGAGGGTCAACCCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS CCA 72 bp | CGGAAAGGTCCGCTTCTGGCACGTCTGCTTTCAGTTTaGGAGACGTTTTCTCCAGCTGAGATGCAAATGCCA | + |
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Preference number: 6 (lower is better) Translates to: RKGPLLARLLSV*ETFSPAEMQMP Trigger: TGGCATTTGCATCTCAGCTGGAGAAAACGTCTCCCAAACTGAAAGCAGACGTGCCAGAAGCGGACCTTTCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS CAA 72 bp | AGAAGAGGAAGCTCCTGTGTCCCAGGTTGCCTGGGGTaGACCCTCGCTGGATTTATAACCCAAAAGTGGTTG | + |
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Preference number: 6 (lower is better) Translates to: RRGSSCVPGCLG*TLAGFITQKWL Trigger: CAACCACTTTTGGGTTATAAATCCAGCGAGGGTCAACCCCAGGCAACCTGGGACACAGGAGCTTCCTCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS TCA 72 bp | AATGCCAGGGTCACTGTCTTGGGCAGTGGGTCCAGCTaGACTTGCTTCAGTTCACGTGACCTTGCAATTAGT | + |
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Preference number: 6 (lower is better) Translates to: NARVTVLGSGSS*TCFSSRDLAIS Trigger: ACTAATTGCAAGGTCACGTGAACTGAAGCAAGTTCAGCTGGACCCACTGCCCAAGACAGTGACCCTGGCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS CCA 72 bp | GGATTTATAACCCAAAAGTGGTTGGTTAGAGGCTCCTaGAGGACTTGGGTTAGGCTTTGGGCAGGCTGTGGA | + |
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Preference number: 6 (lower is better) Translates to: GFITQKWLVRGS*RTWVRLWAGCG Trigger: TCCACAGCCTGCCCAAAGCCTAACCCAAGTCCTCCAGGAGCCTCTAACCAACCACTTTTGGGTTATAAATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS CAA 72 bp | GGGTTGACCCTCGCTGGATTTATAACCCAAAAGTGGTaGGTTAGAGGCTCCTGGAGGACTTGGGTTAGGCTT | + |
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Preference number: 6 (lower is better) Translates to: GLTLAGFITQKW*VRGSWRTWVRL Trigger: AAGCCTAACCCAAGTCCTCCAGGAGCCTCTAACCAACCACTTTTGGGTTATAAATCCAGCGAGGGTCAACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS CCA 72 bp | TCCGGATGTGTTGAACGTTCTTCCTCTCGAGCTCCTTaGCAACTGCATCCAGAATCACCTTATGGTGTGCAA | + |
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Preference number: 6 (lower is better) Translates to: SGCVERSSSRAP*QLHPESPYGVQ Trigger: TTGCACACCATAAGGTGATTCTGGATGCAGTTGCCAAGGAGCTCGAGAGGAAGAACGTTCAACACATCCGGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS CAA 72 bp | GAATCAGAGGCCAAAGGTAGTCATCTGCTGTGCCTTTaGCCACCAGGTAGTGGATGCTCACAGAGTTTGTCT | + |
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Preference number: 6 (lower is better) Translates to: ESEAKGSHLLCL*PPGSGCSQSLS Trigger: AGACAAACTCTGTGAGCATCCACTACCTGGTGGCAAAAGGCACAGCAGATGACTACCTTTGGCCTCTGATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS CAA 72 bp | GGCACAGCTGCTCGGCAGCGGGCAGTCTTTATGTTCTaGAGGAAGTGTGATTCATCAATAATGACGACTTTG | + |
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Preference number: 6 (lower is better) Translates to: GTAARQRAVFMF*RKCDSSIMTTL Trigger: CAAAGTCGTCATTATTGATGAATCACACTTCCTCAAGAACATAAAGACTGCCCGCTGCCGAGCAGCTGTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS CAA 72 bp | AGAAAGCCCAGCTTCCCCCAGAACTTTAATCTTCTCTaGAATCAGAGGCCAAAGGTAGTCATCTGCTGTGCC | + |
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Preference number: 6 (lower is better) Translates to: RKPSFPQNFNLL*NQRPKVVICCA Trigger: GGCACAGCAGATGACTACCTTTGGCCTCTGATTCAAGAGAAGATTAAAGTTCTGGGGGAAGCTGGGCTTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS CCA 72 bp | GCTGTCCAGAAGGTCCAGGATATACTCGACGACACATaGGATTTTAGCTTCTGCTGTTCTGTTGAAGAAGAC | + |
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Preference number: 6 (lower is better) Translates to: AVQKVQDILDDT*DFSFCCSVEED Trigger: GTCTTCTTCAACAGAACAGCAGAAGCTAAAATCCCATGTGTCGTCGAGTATATCCTGGACCTTCTGGACAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS CAA 90 bp | TTTAGGATAGGCACAGCTGCTCGGCAGCGGGCAGTCTTTATGTTCTaGAGGAAGTGTGATTCATCAATAATGACGACTTTGAAAGGGGTT | + |
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Preference number: 6 (lower is better) Translates to: FRIGTAARQRAVFMF*RKCDSSIMTTLKGV Trigger: AACCCCTTTCAAAGTCGTCATTATTGATGAATCACACTTCCTCAAGAACATAAAGACTGCCCGCTGCCGAGCAGCTGTGCCTATCCTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS TCA 72 bp | ACAGCGGGAGCTGTGAGGTCTCTGATCAGTAGGAAATaGATTACTGAGATTCTGTTGCTTGAAAATGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: TAGAVRSLISRK*ITEILLLENGG Trigger: GCCTCCATTTTCAAGCAACAGAATCTCAGTAATTCATTTCCTACTGATCAGAGACCTCACAGCTCCCGCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047615.15 ENSMUST00000145868.8 ENSMUST00000152225.2 |
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| CDS GCA 72 bp | TCATCAATAATGACGACTTTGAAAGGGGTTTTTAGCTaGCTCTCCAACTTGCAAAGGAGGTCAAAGCTGACA | + |
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Preference number: 6 (lower is better) Translates to: SSIMTTLKGVFS*LSNLQRRSKLT Trigger: TGTCAGCTTTGACCTCCTTTGCAAGTTGGAGAGGCAGCTAAAAACCCCTTTCAAAGTCGTCATTATTGATGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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| CDS CAA 90 bp | AGGAAAAGCTGTCCCAATTATCAAAGAATTCAAATCTGCTTTTCTTaGGCGGACTGCCTTCGTCTTCATCTAAGAGATCTCCCAGATCCT | + |
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Preference number: 6 (lower is better) Translates to: RKSCPNYQRIQICFS*ADCLRLHLRDLPDP Trigger: AGGATCTGGGAGATCTCTTAGATGAAGACGAAGGCAGTCCGCCAAAGAAAAGCAGATTTGAATTCTTTGATAATTGGGACAGCTTTTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047615.15 ENSMUST00000152225.2 |
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