Pregenerated sensors for SMARCAD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029920Ensembl transcript IDs: ENSMUST00000031984.9, ENSMUST00000203411.2, ENSMUST00000204114.3, ENSMUST00000204620.3, ENSMUST00000204696.3, ENSMUST00000204801.3, ENSMUST00000204955.2, ENSMUST00000205118.3
Found 191 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCTTCACTCTCCTGAGGATGAAGGGCTTAATGATTTGCTTCGCGTaGGCTATTCTCTCCTTTTCGTATATACTCTGCTCGTCTGCTGGT | + |
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Preference number: 1 (lower is better) Translates to: SFTLLRMKGLMICFA*AILSFSYILCSSAG Trigger: ACCAGCAGACGAGCAGAGTATATACGAAAAGGAGAGAATAGCCCACGCGAAGCAAATCATTAAGCCCTTCATCCTCAGGAGAGTGAAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204620.3 |
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| 3UTR GCA 90 bp | AATGCTCAGAAACCCCATGGTCACCGTGATGTGAATGTCCTTGAATaGACCAAGTTGATATGTCCTCATCAATCAGGAATTCCGCGCTCT | + |
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Preference number: 1 (lower is better) Translates to: NAQKPHGHRDVNVLE*TKLICPHQSGIPRS Trigger: AGAGCGCGGAATTCCTGATTGATGAGGACATATCAACTTGGTGCATTCAAGGACATTCACATCACGGTGACCATGGGGTTTCTGAGCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031984.9 ENSMUST00000204620.3 |
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| 3UTR GCA 90 bp | GAAGAATTTTGCCTTTATAGCCGTCCTCCATCACTTCTTCACAACTaGTATAGTCCTCATCCAGTGAGCTCCCAGCATCAGAACCTGAAT | + |
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Preference number: 1 (lower is better) Translates to: EEFCLYSRPPSLLHN*YSPHPVSSQHQNLN Trigger: ATTCAGGTTCTGATGCTGGGAGCTCACTGGATGAGGACTATAGCAGTTGTGAAGAAGTGATGGAGGACGGCTATAAAGGCAAAATTCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204620.3 |
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| 3UTR CCA 90 bp | GGGTACTGTGATCACAAGGAGGTAGCATTAACACCTGCAAATTCCTaGCAGCCCCGTAGTGGGGAGATAAATTTGATACAGTCATATATC | + |
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Preference number: 1 (lower is better) Translates to: GYCDHKEVALTPANS*QPRSGEINLIQSYI Trigger: GATATATGACTGTATCAAATTTATCTCCCCACTACGGGGCTGCCAGGAATTTGCAGGTGTTAATGCTACCTCCTTGTGATCACAGTACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
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| 3UTR TCA 90 bp | GACCTGGGGACATTAGTGGATGGAATGCCACCTTGTGATTCAGGCTaGGTTCTTACTGACATTGGTGAACATCTGCATCAAATAGCAATA | + |
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Preference number: 1 (lower is better) Translates to: DLGTLVDGMPPCDSG*VLTDIGEHLHQIAI Trigger: TATTGCTATTTGATGCAGATGTTCACCAATGTCAGTAAGAACTCAGCCTGAATCACAAGGTGGCATTCCATCCACTAATGTCCCCAGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031984.9 ENSMUST00000204620.3 |
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| 3UTR CCA 90 bp | AATTCCGCGCTCTCCTTCACAGGCCCATTGATGTTTTTAGTAATGTaGCTATATCTGCTGGCATACTTCCTTCATCAGCTTCATCTACTG | + |
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Preference number: 1 (lower is better) Translates to: NSALSFTGPLMFLVM*LYLLAYFLHQLHLL Trigger: CAGTAGATGAAGCTGATGAAGGAAGTATGCCAGCAGATATAGCCACATTACTAAAAACATCAATGGGCCTGTGAAGGAGAGCGCGGAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204620.3 |
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| 3UTR TCA 90 bp | TCATTTGATTCTTCTCCACGGTCCCCTCGCGGCTGTTTTACAGACTaGTCATCATTAACGTCATCCTCCTCAGAAGAAGAAGATAATTTC | + |
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Preference number: 1 (lower is better) Translates to: SFDSSPRSPRGCFTD*SSLTSSSSEEEDNF Trigger: GAAATTATCTTCTTCTTCTGAGGAGGATGACGTTAATGATGATCAGTCTGTAAAACAGCCGCGAGGGGACCGTGGAGAAGAATCAAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204620.3 |
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| 3UTR GCA 90 bp | GCGGATAGAGCCCATATTCTTCAGCATATGGCCTTCATCAAAAATTaGATAATTCAGTTTCAGTCGTCGAAAGAGACTGCGGTCATCAGA | + |
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Preference number: 1 (lower is better) Translates to: ADRAHILQHMAFIKN*IIQFQSSKETAVIR Trigger: TCTGATGACCGCAGTCTCTTTCGACGACTGAAACTGAATTATGCAATTTTTGATGAAGGCCATATGCTGAAGAATATGGGCTCTATCCGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204620.3 |
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| 3UTR GCA 90 bp | GCTGGCATACTTCCTTCATCAGCTTCATCTACTGTGGTCATGTCTTaGTCTAGTTTCAACTTTTGTTGGTTAATTTTTAGCATGGACTCT | + |
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Preference number: 1 (lower is better) Translates to: AGILPSSASSTVVMS*SSFNFCWLIFSMDS Trigger: AGAGTCCATGCTAAAAATTAACCAACAAAAGTTGAAACTAGAGCAAGACATGACCACAGTAGATGAAGCTGATGAAGGAAGTATGCCAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204620.3 |
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| 3UTR TCA 90 bp | ATTTTACTTCTAAATTTCACTTTGTCACCCACACTGAACTGGAATTaGACAATGGCTTCTCTTCAGGTGGTTCTGTATTGGAAATCCTGG | + |
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Preference number: 1 (lower is better) Translates to: ILLLNFTLSPTLNWN*TMASLQVVLYWKSW Trigger: CCAGGATTTCCAATACAGAACCACCTGAAGAGAAGCCATTGTTCAATTCCAGTTCAGTGTGGGTGACAAAGTGAAATTTAGAAGTAAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031984.9 ENSMUST00000204620.3 |
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| 3UTR CAA 90 bp | TGCTCCTGCTTCTCTGACATCGCACATAGCTCAATCCGATCCTTCTaGGGAGGCAGGAGCTTAAGAACCTCCTCCTTCACTCTCCTGAGG | + |
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Preference number: 2 (lower is better) Translates to: CSCFSDIAHSSIRSF*GGRSLRTSSFTLLR Trigger: CCTCAGGAGAGTGAAGGAGGAGGTTCTTAAGCTCCTGCCTCCCAAGAAGGATCGGATTGAGCTATGTGCGATGTCAGAGAAGCAGGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204620.3 |
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| 3UTR-3UTR GCA 90 bp | GCCAGAATGCCATTAAGTCCATGCTTATGCACCAACGCCAGCCAGTTCAACCCACCTGGGTCCACCACCTaGATCACCAAACATCAGCAA | + |
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Preference number: 2 (lower is better) Translates to: ARMPLSPCLCTNASQFNPPGSTT*ITKHQQ Trigger: TTGCTGATGTTTGGTGATGCAGGTGGTGGACCCAGG...TGGGTTGAACTGGCTGGCGTTGGTGCATAAGCATGGACTTAATGGCATTCTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204620.3 |
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| 3UTR CAA 90 bp | AAACCCCATGGTCACCGTGATGTGAATGTCCTTGAATGCACCAAGTaGATATGTCCTCATCAATCAGGAATTCCGCGCTCTCCTTCACAG | + |
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Preference number: 2 (lower is better) Translates to: KPHGHRDVNVLECTK*ICPHQSGIPRSPSQ Trigger: CTGTGAAGGAGAGCGCGGAATTCCTGATTGATGAGGACATATCAACTTGGTGCATTCAAGGACATTCACATCACGGTGACCATGGGGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204620.3 |
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| 3UTR-3UTR GCA 90 bp | GCCAGAATGCCATTAAGTCCATGCTTATGCACCAACGCCAGCCAGTTCAACCCAGAGGTATGCCAGGAATaGAATGGCTTGAATGGTTTT | + |
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Preference number: 2 (lower is better) Translates to: ARMPLSPCLCTNASQFNPEVCQE*NGLNGF Trigger: AAAACCATTCAAGCCATTGCATTCCTGGCATACCTC...TGGGTTGAACTGGCTGGCGTTGGTGCATAAGCATGGACTTAATGGCATTCTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203411.2 ENSMUST00000204620.3 |
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| 3UTR-3UTR TCA 90 bp | CTGGCATACTTCCTTCATCAGCTTCATCTACTGTGGTCATGTCTTGCTCTAGTTTTCTGCAGACTCATTTaGTTCTTCTCCACGGTCCCC | + |
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Preference number: 2 (lower is better) Translates to: LAYFLHQLHLLWSCLALVFCRLI*FFSTVP Trigger: GGGGACCGTGGAGAAGAATCAAATGAGTCTGCAGAA...AACTAGAGCAAGACATGACCACAGTAGATGAAGCTGATGAAGGAAGTATGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204620.3 |
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| 3UTR CAA 90 bp | GGTGGAGGCTGGAACAACAATCAAATGAGGCCCTTTATTACCCTCTaGAAAGAGGTATGCCAGGAATGCAATGGCTTGAATGGTTTTTCC | + |
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Preference number: 2 (lower is better) Translates to: GGGWNNNQMRPFITL*KEVCQECNGLNGFS Trigger: GGAAAAACCATTCAAGCCATTGCATTCCTGGCATACCTCTTTCAAGAGGGTAATAAAGGGCCTCATTTGATTGTTGTTCCAGCCTCCACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000203411.2 ENSMUST00000204620.3 |
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| 3UTR-3UTR TCA 90 bp | TCCAACAACTTGACTAAGCGACCTGGGTACTGTGATCACAAGGAGGTAGCATTACCTTGTGATTCAGGCTaGGTTCTTACTGACATTGGT | + |
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Preference number: 2 (lower is better) Translates to: SNNLTKRPGYCDHKEVALPCDSG*VLTDIG Trigger: ACCAATGTCAGTAAGAACTCAGCCTGAATCACAAGG...TAATGCTACCTCCTTGTGATCACAGTACCCAGGTCGCTTAGTCAAGTTGTTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
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| 3UTR-3UTR GCA 90 bp | TGGAGGCTGGAACAACAATCAAATGAGGCCCTTTATTACCCTCTTGAAAGAGGTTTAAGTCCATGCTTATaGACCAACGCCAGCCAGTTC | + |
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Preference number: 2 (lower is better) Translates to: WRLEQQSNEALYYPLERGLSPCL*TNASQF Trigger: GAACTGGCTGGCGTTGGTGCATAAGCATGGACTTAA...ACCTCTTTCAAGAGGGTAATAAAGGGCCTCATTTGATTGTTGTTCCAGCCTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203411.2 ENSMUST00000204620.3 |
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| 3UTR-3UTR GCA 90 bp | CAACAATCAAATGAGGCCCTTTATTACCCTCTTGAAAGAGGTATGCCAGGAATGGCTTTTCCCAGTTGCTaGTGGCTTCTGCAGACTCAT | + |
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Preference number: 2 (lower is better) Translates to: QQSNEALYYPLERGMPGMAFPSC*WLLQTH Trigger: ATGAGTCTGCAGAAGCCAGCAGCAACTGGGAAAAGC...CATTCCTGGCATACCTCTTTCAAGAGGGTAATAAAGGGCCTCATTTGATTGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204620.3 |
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| 3UTR-3UTR GCA 90 bp | CTGGCATACTTCCTTCATCAGCTTCATCTACTGTGGTCATGTCTTGCTCTAGTTTCTAGCAGATTATTCTaGACAGGTGTGCCTGTGAGC | + |
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Preference number: 2 (lower is better) Translates to: LAYFLHQLHLLWSCLALVSSRLF*TGVPVS Trigger: GCTCACAGGCACACCTGTGCAGAATAATCTGCTAGA...AACTAGAGCAAGACATGACCACAGTAGATGAAGCTGATGAAGGAAGTATGCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204620.3 |
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| 3UTR-3UTR CCA 90 bp | TGGAGGCTGGAACAACAATCAAATGAGGCCCTTTATTACCCTCTTGAAAGAGGTCAGGATGTGAGGATCTaGAGAATCCAGTTAGTGGCA | + |
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Preference number: 2 (lower is better) Translates to: WRLEQQSNEALYYPLERGQDVRI*RIQLVA Trigger: TGCCACTAACTGGATTCTCCAGATCCTCACATCCTG...ACCTCTTTCAAGAGGGTAATAAAGGGCCTCATTTGATTGTTGTTCCAGCCTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204620.3 |
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| 3UTR CAA 90 bp | ATGTCCTCATCAATCAGGAATTCCGCGCTCTCCTTCACAGGCCCATaGATGTTTTTAGTAATGTGGCTATATCTGCTGGCATACTTCCTT | + |
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Preference number: 2 (lower is better) Translates to: MSSSIRNSALSFTGP*MFLVMWLYLLAYFL Trigger: AAGGAAGTATGCCAGCAGATATAGCCACATTACTAAAAACATCAATGGGCCTGTGAAGGAGAGCGCGGAATTCCTGATTGATGAGGACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204620.3 |
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| 3UTR-3UTR GCA 90 bp | TATGGTGGAGGCTGGAACAACAATCAAATGAGGCCCTTTATTACCCTCTTGAAATTAAGTCCATGCTTATaGACCAACGCCAGCCAGTTC | + |
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Preference number: 2 (lower is better) Translates to: YGGGWNNNQMRPFITLLKLSPCL*TNASQF Trigger: GAACTGGCTGGCGTTGGTGCATAAGCATGGACTTAA...TTTCAAGAGGGTAATAAAGGGCCTCATTTGATTGTTGTTCCAGCCTCCACCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203411.2 ENSMUST00000204620.3 |
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| 3UTR-3UTR GCA 90 bp | CCTCTTGAAAGAGGTATGCCAGGAATGCAATGGCTTGAATGGTTTTTCCTAGGCGTGTACATCCACTCATaGTCCTTAAGCACTTCTCTT | + |
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Preference number: 2 (lower is better) Translates to: PLERGMPGMQWLEWFFLGVYIHS*SLSTSL Trigger: AAGAGAAGTGCTTAAGGAGCATGAGTGGATGTACAC...GCCTAGGAAAAACCATTCAAGCCATTGCATTCCTGGCATACCTCTTTCAAGAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204620.3 |
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| 3UTR-3UTR CCA 90 bp | TTCACTGTGGGTTTAAAAGGTACAATTTCCAACAACTTGACTAAGCGACCTGGGCAGGATGTGAGGATCTaGAGAATCCAGTTAGTGGCA | + |
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Preference number: 2 (lower is better) Translates to: FTVGLKGTISNNLTKRPGQDVRI*RIQLVA Trigger: TGCCACTAACTGGATTCTCCAGATCCTCACATCCTG...CCCAGGTCGCTTAGTCAAGTTGTTGGAAATTGTACCTTTTAAACCCACAGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
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| 3UTR-3UTR CCA 90 bp | CTGGCATACTTCCTTCATCAGCTTCATCTACTGTGGTCATGTCTTGCTCTAGTTCAGGTGGTTCTGTATTaGAAATCCTGGGAACTGGTA | + |
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Preference number: 2 (lower is better) Translates to: LAYFLHQLHLLWSCLALVQVVLY*KSWELV Trigger: TACCAGTTCCCAGGATTTCCAATACAGAACCACCTG...AACTAGAGCAAGACATGACCACAGTAGATGAAGCTGATGAAGGAAGTATGCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204620.3 |
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| 3UTR-3UTR CCA 90 bp | AATGTGGCTATATCTGCTGGCATACTTCCTTCATCAGCTTCATCTACTGTGGTCATAATTTCCTTTTCCTaGGTCCACCACCTGCATCAC | + |
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Preference number: 2 (lower is better) Translates to: NVAISAGILPSSASSTVVIISFS*VHHLHH Trigger: GTGATGCAGGTGGTGGACCCAGGAAAAGGAAATTAT...GACCACAGTAGATGAAGCTGATGAAGGAAGTATGCCAGCAGATATAGCCACATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204620.3 |
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| 3UTR CAA 90 bp | ATCTGTTCTGCTGGACTAGAAATATGCCACCAACATCTGCTGATCTaGGTGATTCAGCAGAAGGAAATGTGTAAGAGAAAACTGGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: ICSAGLEICHQHLLI*VIQQKEMCKRKLEQ Trigger: CTGCTCCAGTTTTCTCTTACACATTTCCTTCTGCTGAATCACCAAGATCAGCAGATGTTGGTGGCATATTTCTAGTCCAGCAGAACAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031984.9 ENSMUST00000204620.3 |
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| 3UTR-3UTR TCA 90 bp | AAACCCCATGGTCACCGTGATGTGAATGTCCTTGAATGCACCAAGTTGATATGTAACATTTTCAGGATGTaGGGATCTGGAGAATCCAGT | + |
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Preference number: 2 (lower is better) Translates to: KPHGHRDVNVLECTKLICNIFRM*GSGESS Trigger: ACTGGATTCTCCAGATCCTCACATCCTGAAAATGTT...ACATATCAACTTGGTGCATTCAAGGACATTCACATCACGGTGACCATGGGGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031984.9 ENSMUST00000204620.3 |
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| 3UTR-3UTR TCA 90 bp | CAACATCTGCTGATCTTGGTGATTCAGCAGAAGGAAATGTGTAAGAGAAAACTGTGGAATGCCACCTTGTaGTTCAGGCTGAGTTCTTAC | + |
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Preference number: 2 (lower is better) Translates to: QHLLILVIQQKEMCKRKLWNATL*FRLSSY Trigger: GTAAGAACTCAGCCTGAATCACAAGGTGGCATTCCA...CAGTTTTCTCTTACACATTTCCTTCTGCTGAATCACCAAGATCAGCAGATGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031984.9 ENSMUST00000204620.3 |
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| 3UTR-3UTR TCA 90 bp | AACAATGGCTTCTCTTCAGGTGGTTCTGTATTGGAAATCCTGGGAACTGGTAAAGGTGCAATAAGAAAATaGAAGAAGGAACTGACCCCC | + |
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Preference number: 2 (lower is better) Translates to: NNGFSSGGSVLEILGTGKGAIRK*KKELTP Trigger: GGGGGTCAGTTCCTTCTTTCATTTTCTTATTGCACC...TTTACCAGTTCCCAGGATTTCCAATACAGAACCACCTGAAGAGAAGCCATTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031984.9 ENSMUST00000204620.3 |
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| 3UTR-3UTR TCA 90 bp | CTGCTGATCTTGGTGATTCAGCAGAAGGAAATGTGTAAGAGAAAACTGGAGCAGGGAACAACAATCAAATaGGGCCCTTTATTACCCTCT | + |
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Preference number: 2 (lower is better) Translates to: LLILVIQQKEMCKRKLEQGTTIK*GPLLPS Trigger: AGAGGGTAATAAAGGGCCTCATTTGATTGTTGTTCC...CTGCTCCAGTTTTCTCTTACACATTTCCTTCTGCTGAATCACCAAGATCAGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204620.3 |
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| 3UTR-3UTR TCA 90 bp | TGGAGGCTGGAACAACAATCAAATGAGGCCCTTTATTACCCTCTTGAAAGAGGTGGCTGTTTTACAGACTaGTCATCATTAACGTCATCC | + |
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Preference number: 2 (lower is better) Translates to: WRLEQQSNEALYYPLERGGCFTD*SSLTSS Trigger: GGATGACGTTAATGATGATCAGTCTGTAAAACAGCC...ACCTCTTTCAAGAGGGTAATAAAGGGCCTCATTTGATTGTTGTTCCAGCCTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204620.3 |
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| 3UTR-3UTR GCA 90 bp | AACAATGGCTTCTCTTCAGGTGGTTCTGTATTGGAAATCCTGGGAACTGGTAAAGCTGGACTAGAAATATaGCACCAACATCTGCTGATC | + |
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Preference number: 2 (lower is better) Translates to: NNGFSSGGSVLEILGTGKAGLEI*HQHLLI Trigger: GATCAGCAGATGTTGGTGGCATATTTCTAGTCCAGC...TTTACCAGTTCCCAGGATTTCCAATACAGAACCACCTGAAGAGAAGCCATTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031984.9 ENSMUST00000204620.3 |
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| 3UTR-3UTR GCA 90 bp | TTAACCAGTTATCTATGGTGGAGGCTGGAACAACAATCAAATGAGGCCCTTTATATGCCATTAAGTCCATaGTTATGCACCAACGCCAGC | + |
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Preference number: 2 (lower is better) Translates to: LTSYLWWRLEQQSNEALYMPLSP*LCTNAS Trigger: GCTGGCGTTGGTGCATAAGCATGGACTTAATGGCAT...ATAAAGGGCCTCATTTGATTGTTGTTCCAGCCTCCACCATAGATAACTGGTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203411.2 ENSMUST00000204620.3 |
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| 3UTR-3UTR GCA 90 bp | TTTATTACCCTCTTGAAAGAGGTATGCCAGGAATGCAATGGCTTGAATGGTTTTCTTGCTTTTCCCAGTTaGTGCTGGCTTCTGCAGACT | + |
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Preference number: 2 (lower is better) Translates to: FITLLKEVCQECNGLNGFLAFPS*CWLLQT Trigger: AGTCTGCAGAAGCCAGCAGCAACTGGGAAAAGCAAG...AAAACCATTCAAGCCATTGCATTCCTGGCATACCTCTTTCAAGAGGGTAATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204620.3 |
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| 3UTR-3UTR GCA 90 bp | CTGGCATACTTCCTTCATCAGCTTCATCTACTGTGGTCATGTCTTGCTCTAGTTTCAACTCAGACAAGATaGATCCTAAGGCTCGGAATT | + |
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Preference number: 2 (lower is better) Translates to: LAYFLHQLHLLWSCLALVSTQTR*ILRLGI Trigger: AATTCCGAGCCTTAGGATGCATCTTGTCTGAGTTGA...AACTAGAGCAAGACATGACCACAGTAGATGAAGCTGATGAAGGAAGTATGCCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204620.3 |
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| 3UTR CAA 90 bp | TCTCTGTTCCATCCGCCTCCATTCCCGGTGAGCATCGTAACTTGTTaGGTCAGTTTATTTGAAATGTCCTCACATTTGTTCATAAGTCTT | + |
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Preference number: 2 (lower is better) Translates to: SLFHPPPFPVSIVTC*VSLFEMSSHLFISL Trigger: AAGACTTATGAACAAATGTGAGGACATTTCAAATAAACTGACCAAACAAGTTACGATGCTCACCGGGAATGGAGGCGGATGGAACAGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203411.2 ENSMUST00000204620.3 |
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| 3UTR-3UTR TCA 90 bp | AACAATGGCTTCTCTTCAGGTGGTTCTGTATTGGAAATCCTGGGAACTGGTAAAAGCATTACCTTGGTATaGAGTCACATCCAGTTTCCT | + |
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Preference number: 2 (lower is better) Translates to: NNGFSSGGSVLEILGTGKSITLV*SHIQFP Trigger: AGGAAACTGGATGTGACTTCATACCAAGGTAATGCT...TTTACCAGTTCCCAGGATTTCCAATACAGAACCACCTGAAGAGAAGCCATTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031984.9 ENSMUST00000204620.3 |
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| 3UTR-3UTR TCA 90 bp | AACAATGGCTTCTCTTCAGGTGGTTCTGTATTGGAAATCCTGGGAACTGGTAAAACACTGAACTGGAATTaGACAATGGCTTCTCTTCAG | + |
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Preference number: 2 (lower is better) Translates to: NNGFSSGGSVLEILGTGKTLNWN*TMASLQ Trigger: CTGAAGAGAAGCCATTGTTCAATTCCAGTTCAGTGT...TTTACCAGTTCCCAGGATTTCCAATACAGAACCACCTGAAGAGAAGCCATTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031984.9 ENSMUST00000204620.3 |
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| 3UTR-3UTR TCA 90 bp | TATCTATGGTGGAGGCTGGAACAACAATCAAATGAGGCCCTTTATTACCCTCTTCCTTCTGATAGGGCTTaGGTGACAAACTTTGGTTTA | + |
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Preference number: 2 (lower is better) Translates to: YLWWRLEQQSNEALYYPLPSDRA*VTNFGL Trigger: TAAACCAAAGTTTGTCACTCAAGCCCTATCAGAAGG...AAGAGGGTAATAAAGGGCCTCATTTGATTGTTGTTCCAGCCTCCACCATAGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203411.2 ENSMUST00000204620.3 |
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| 3UTR-3UTR TCA 90 bp | CTGGCATACTTCCTTCATCAGCTTCATCTACTGTGGTCATGTCTTGCTCTAGTTTTCTCAATTGCATCATaGCATTGCACATCTCTGTGT | + |
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Preference number: 2 (lower is better) Translates to: LAYFLHQLHLLWSCLALVFSIAS*HCTSLC Trigger: ACACAGAGATGTGCAATGTCATGATGCAATTGAGAA...AACTAGAGCAAGACATGACCACAGTAGATGAAGCTGATGAAGGAAGTATGCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204620.3 |
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| 3UTR-3UTR CCA 90 bp | ATCTATGGTGGAGGCTGGAACAACAATCAAATGAGGCCCTTTATTACCCTCTTGATGCCAGGAATGCAATaGCTTGAATGGTTTTTCCTA | + |
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Preference number: 2 (lower is better) Translates to: IYGGGWNNNQMRPFITLLMPGMQ*LEWFFL Trigger: TAGGAAAAACCATTCAAGCCATTGCATTCCTGGCAT...CAAGAGGGTAATAAAGGGCCTCATTTGATTGTTGTTCCAGCCTCCACCATAGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000203411.2 ENSMUST00000204620.3 |
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| 3UTR-3UTR CCA 90 bp | AACAATGGCTTCTCTTCAGGTGGTTCTGTATTGGAAATCCTGGGAACTGGTAAAACCAGTTATCTATGGTaGAGGCTGGAACAACAATCA | + |
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Preference number: 2 (lower is better) Translates to: NNGFSSGGSVLEILGTGKTSYLW*RLEQQS Trigger: TGATTGTTGTTCCAGCCTCCACCATAGATAACTGGT...TTTACCAGTTCCCAGGATTTCCAATACAGAACCACCTGAAGAGAAGCCATTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204620.3 |
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| 3UTR-3UTR GCA 90 bp | AACAATGGCTTCTCTTCAGGTGGTTCTGTATTGGAAATCCTGGGAACTGGTAAAGTGAATGTCCTTGAATaGACCAAGTTGATATGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: NNGFSSGGSVLEILGTGKVNVLE*TKLICP Trigger: AGGACATATCAACTTGGTGCATTCAAGGACATTCAC...TTTACCAGTTCCCAGGATTTCCAATACAGAACCACCTGAAGAGAAGCCATTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031984.9 ENSMUST00000204620.3 |
||
| 3UTR-3UTR GCA 90 bp | TATGGTGGAGGCTGGAACAACAATCAAATGAGGCCCTTTATTACCCTCTTGAAAGTGAATGTCCTTGAATaGACCAAGTTGATATGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: YGGGWNNNQMRPFITLLKVNVLE*TKLICP Trigger: AGGACATATCAACTTGGTGCATTCAAGGACATTCAC...TTTCAAGAGGGTAATAAAGGGCCTCATTTGATTGTTGTTCCAGCCTCCACCATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204620.3 |
||
| 3UTR-3UTR CCA 90 bp | AACAATGGCTTCTCTTCAGGTGGTTCTGTATTGGAAATCCTGGGAACTGGTAAAGTTAATCTGTTCTGCTaGACTAGAAATATGCCACCA | + |
|
Preference number: 2 (lower is better) Translates to: NNGFSSGGSVLEILGTGKVNLFC*TRNMPP Trigger: TGGTGGCATATTTCTAGTCCAGCAGAACAGATTAAC...TTTACCAGTTCCCAGGATTTCCAATACAGAACCACCTGAAGAGAAGCCATTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031984.9 ENSMUST00000204620.3 |
||
| 3UTR-3UTR CCA 90 bp | AACAATGGCTTCTCTTCAGGTGGTTCTGTATTGGAAATCCTGGGAACTGGTAAAATGCCAGGAATGCAATaGCTTGAATGGTTTTTCCTA | + |
|
Preference number: 2 (lower is better) Translates to: NNGFSSGGSVLEILGTGKMPGMQ*LEWFFL Trigger: TAGGAAAAACCATTCAAGCCATTGCATTCCTGGCAT...TTTACCAGTTCCCAGGATTTCCAATACAGAACCACCTGAAGAGAAGCCATTGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204620.3 |
||
| 3UTR-3UTR TCA 90 bp | CAGGTGGTTCTGTATTGGAAATCCTGGGAACTGGTAAATTATATTTTGTTAAGATGGAATGCCACCTTGTaGTTCAGGCTGAGTTCTTAC | + |
|
Preference number: 2 (lower is better) Translates to: QVVLYWKSWELVNYILLRWNATL*FRLSSY Trigger: GTAAGAACTCAGCCTGAATCACAAGGTGGCATTCCA...TCTTAACAAAATATAATTTACCAGTTCCCAGGATTTCCAATACAGAACCACCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031984.9 ENSMUST00000204620.3 |
||
| 3UTR-3UTR CCA 90 bp | ACTGCGGTCATCAGAGCTGCTGATTGCACAATTATACGTTGTAACAATTACATTTGGCTTCTCTTCAGGTaGTTCTGTATTGGAAATCCT | + |
|
Preference number: 2 (lower is better) Translates to: TAVIRAADCTIIRCNNYIWLLFR*FCIGNP Trigger: AGGATTTCCAATACAGAACCACCTGAAGAGAAGCCA...AATGTAATTGTTACAACGTATAATTGTGCAATCAGCAGCTCTGATGACCGCAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204620.3 |
||
| 3UTR CAA 90 bp | CATGCCTTTCTTTCGCCTACACTTGAATTCTATGCTTCCACAACTTaGCTATTTTTCCAATTAAAAATGCTGCAGCTTGCTACACTCCAT | + |
|
Preference number: 2 (lower is better) Translates to: HAFLSPTLEFYASTT*LFFQLKMLQLATLH Trigger: ATGGAGTGTAGCAAGCTGCAGCATTTTTAATTGGAAAAATAGCAAAGTTGTGGAAGCATAGAATTCAAGTGTAGGCGAAAGAAAGGCATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000203411.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTCTTTCGCCTACACTTGAATTCTATGCTTCCACAACTTTGCTATTTTTCCAACTACACTCCATCAAATaGCCACGTTGTTTAACCAGG | + |
|
Preference number: 2 (lower is better) Translates to: FLSPTLEFYASTTLLFFQLHSIK*PRCLTR Trigger: CCTGGTTAAACAACGTGGCCATTTGATGGAGTGTAG...TTGGAAAAATAGCAAAGTTGTGGAAGCATAGAATTCAAGTGTAGGCGAAAGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203411.2 |
||
| 3UTR-3UTR CCA 90 bp | ACTGCGGTCATCAGAGCTGCTGATTGCACAATTATACGTTGTAACAATTACATTTATCTAGCATTACCTTaGTATGAAGTCACATCCAGT | + |
|
Preference number: 2 (lower is better) Translates to: TAVIRAADCTIIRCNNYIYLALP*YEVTSS Trigger: ACTGGATGTGACTTCATACCAAGGTAATGCTAGATA...AATGTAATTGTTACAACGTATAATTGTGCAATCAGCAGCTCTGATGACCGCAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204620.3 |
||
| 3UTR-3UTR CAA 90 bp | GCTCCTGCTTCTCTGACATCGCACATAGCTCAATCCGATCCTTCTTGGGAGGCACAACATCTGCTGATCTaGGTGATTCAGCAGAAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: APASLTSHIAQSDPSWEAQHLLI*VIQQKE Trigger: TTCCTTCTGCTGAATCACCAAGATCAGCAGATGTTG...TGCCTCCCAAGAAGGATCGGATTGAGCTATGTGCGATGTCAGAGAAGCAGGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204620.3 |
||
| 3UTR TCA 72 bp | ACGCCAGCCAGTTCAACCCAACCTTCTGATAGGGCTTaGGTGACAAACTTTGGTTTAGAAGGGAGGGCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: TPASSTQPSDRA*VTNFGLEGRAV Trigger: AACAGCCCTCCCTTCTAAACCAAAGTTTGTCACTCAAGCCCTATCAGAAGGTTGGGTTGAACTGGCTGGCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203411.2 ENSMUST00000204620.3 |
||
| 3UTR-3UTR CAA 90 bp | TTCGCGTGGGCTATTCTCTCCTTTTCGTATATACTCTGCTCGTCTGCTGGTTTCCTTCTGCAGACTCATTaGATTCTTCTCCACGGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: FAWAILSFSYILCSSAGFLLQTH*ILLHGP Trigger: GGGACCGTGGAGAAGAATCAAATGAGTCTGCAGAAG...GAAACCAGCAGACGAGCAGAGTATATACGAAAAGGAGAGAATAGCCCACGCGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204620.3 |
||
| 3UTR-3UTR CAA 90 bp | GCATTAGCTGAGACATCTCCTTCAGTTTCTCAGGTGTGTAATACTGGCGGTGTATCTTGCTTTTCCCAGTaGCTGCTGGCTTCTGCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: ALAETSPSVSQVCNTGGVSCFSQ*LLASAD Trigger: GTCTGCAGAAGCCAGCAGCAACTGGGAAAAGCAAGA...TACACCGCCAGTATTACACACCTGAGAAACTGAAGGAGATGTCTCAGCTAATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204620.3 |
||
| 3UTR-3UTR CAA 90 bp | GAAGAAGAGGACCTGGGGACATTAGTGGATGGAATGCCACCTTGTGATTCAGGCGAGTTCTTACTGACATaGGTGAACATCTGCATCAAA | + |
|
Preference number: 3 (lower is better) Translates to: EEEDLGTLVDGMPPCDSGEFLLT*VNICIK Trigger: TTTGATGCAGATGTTCACCAATGTCAGTAAGAACTC...GCCTGAATCACAAGGTGGCATTCCATCCACTAATGTCCCCAGGTCCTCTTCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031984.9 ENSMUST00000204620.3 |
||
| 3UTR CCA 72 bp | GATCACAAGGAGGTAGCATTAACACCTGCAAATTCCTaGCAGCCCCGTAGTGGGGAGATAAATTTGATACAG | + |
|
Preference number: 3 (lower is better) Translates to: DHKEVALTPANS*QPRSGEINLIQ Trigger: CTGTATCAAATTTATCTCCCCACTACGGGGCTGCCAGGAATTTGCAGGTGTTAATGCTACCTCCTTGTGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
||
| 3UTR CCA 72 bp | CTCCTGAGGATGAAGGGCTTAATGATTTGCTTCGCGTaGGCTATTCTCTCCTTTTCGTATATACTCTGCTCG | + |
|
Preference number: 3 (lower is better) Translates to: LLRMKGLMICFA*AILSFSYILCS Trigger: CGAGCAGAGTATATACGAAAAGGAGAGAATAGCCCACGCGAAGCAAATCATTAAGCCCTTCATCCTCAGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204620.3 |
||
| 3UTR-3UTR CAA 90 bp | TTCGCGTGGGCTATTCTCTCCTTTTCGTATATACTCTGCTCGTCTGCTGGTTTCTTGCTTACGCTCTTCTaGAGAACCATAGTAACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: FAWAILSFSYILCSSAGFLLTLF*RTIVTE Trigger: CTCTGTTACTATGGTTCTCAAGAAGAGCGTAAGCAA...GAAACCAGCAGACGAGCAGAGTATATACGAAAAGGAGAGAATAGCCCACGCGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204620.3 |
||
| 3UTR-3UTR CAA 90 bp | TCCAACAACTTGACTAAGCGACCTGGGTACTGTGATCACAAGGAGGTAGCATTACTTCTAAATTTCACTTaGTCACCCACACTGAACTGG | + |
|
Preference number: 3 (lower is better) Translates to: SNNLTKRPGYCDHKEVALLLNFT*SPTLNW Trigger: CCAGTTCAGTGTGGGTGACAAAGTGAAATTTAGAAG...TAATGCTACCTCCTTGTGATCACAGTACCCAGGTCGCTTAGTCAAGTTGTTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
||
| 3UTR-3UTR CAA 90 bp | AAACCCCATGGTCACCGTGATGTGAATGTCCTTGAATGCACCAAGTTGATATGTAGCACTGGGGGTGTCTaGAAAAGTATGAGCTACAAT | + |
|
Preference number: 3 (lower is better) Translates to: KPHGHRDVNVLECTKLICSTGGV*KSMSYN Trigger: ATTGTAGCTCATACTTTTCAAGACACCCCCAGTGCT...ACATATCAACTTGGTGCATTCAAGGACATTCACATCACGGTGACCATGGGGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGCTGATCTTGGTGATTCAGCAGAAGGAAATGTGTAAGAGAAAACTGGAGCAGCCCTTTATTACCCTCTaGAAAGAGGTATGCCAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: LLILVIQQKEMCKRKLEQPFITL*KEVCQE Trigger: TTCCTGGCATACCTCTTTCAAGAGGGTAATAAAGGG...CTGCTCCAGTTTTCTCTTACACATTTCCTTCTGCTGAATCACCAAGATCAGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204620.3 |
||
| 3UTR TCA 72 bp | TTTGTAACTTCACTTTGTGAAGCACACTGCACGTCTTaGTCTTCCGCAAACACTTTCAGAGACTCCAAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: FVTSLCEAHCTS*SSANTFRDSKA Trigger: AGCCTTGGAGTCTCTGAAAGTGTTTGCGGAAGATCAAGACGTGCAGTGTGCTTCACAAAGTGAAGTTACAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204620.3 |
||
| 3UTR GCA 72 bp | CTAGATGTTATCTTCAAGCATCTGTCACATCTAGCTTaGAGAAAAGATCAGTGCTGGGGGAAGCATGAAACC | + |
|
Preference number: 3 (lower is better) Translates to: LDVIFKHLSHLA*RKDQCWGKHET Trigger: GGTTTCATGCTTCCCCCAGCACTGATCTTTTCTGCAAGCTAGATGTGACAGATGCTTGAAGATAACATCTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000204696.3 ENSMUST00000204955.2 ENSMUST00000205118.3 |
||
| 3UTR GCA 72 bp | TCCTTCACTCTCCTGAGGATGAAGGGCTTAATGATTTaGTTCGCGTGGGCTATTCTCTCCTTTTCGTATATA | + |
|
Preference number: 3 (lower is better) Translates to: SFTLLRMKGLMI*FAWAILSFSYI Trigger: TATATACGAAAAGGAGAGAATAGCCCACGCGAAGCAAATCATTAAGCCCTTCATCCTCAGGAGAGTGAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204620.3 |
||
| 3UTR-3UTR CAA 90 bp | TTCGCGTGGGCTATTCTCTCCTTTTCGTATATACTCTGCTCGTCTGCTGGTTTCGTTAGTGGCAAAAAGTaGTCCATACTATGTGAAATG | + |
|
Preference number: 3 (lower is better) Translates to: FAWAILSFSYILCSSAGFVSGKK*SILCEM Trigger: CATTTCACATAGTATGGACAACTTTTTGCCACTAAC...GAAACCAGCAGACGAGCAGAGTATATACGAAAAGGAGAGAATAGCCCACGCGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204620.3 |
||
| 3UTR-3UTR CAA 90 bp | AACAATGGCTTCTCTTCAGGTGGTTCTGTATTGGAAATCCTGGGAACTGGTAAACAACATCTGCTGATCTaGGTGATTCAGCAGAAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: NNGFSSGGSVLEILGTGKQHLLI*VIQQKE Trigger: TTCCTTCTGCTGAATCACCAAGATCAGCAGATGTTG...TTTACCAGTTCCCAGGATTTCCAATACAGAACCACCTGAAGAGAAGCCATTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031984.9 ENSMUST00000204620.3 |
||
| 3UTR-3UTR CAA 90 bp | TTCGCGTGGGCTATTCTCTCCTTTTCGTATATACTCTGCTCGTCTGCTGGTTTCAACTACGTCCCTTTCTaGAATTACCGTTTTGCAATT | + |
|
Preference number: 3 (lower is better) Translates to: FAWAILSFSYILCSSAGFNYVPF*NYRFAI Trigger: AATTGCAAAACGGTAATTCAAGAAAGGGACGTAGTT...GAAACCAGCAGACGAGCAGAGTATATACGAAAAGGAGAGAATAGCCCACGCGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204620.3 |
||
| 3UTR TCA 72 bp | ACATTAGTGGATGGAATGCCACCTTGTGATTCAGGCTaGGTTCTTACTGACATTGGTGAACATCTGCATCAA | + |
|
Preference number: 3 (lower is better) Translates to: TLVDGMPPCDSG*VLTDIGEHLHQ Trigger: TTGATGCAGATGTTCACCAATGTCAGTAAGAACTCAGCCTGAATCACAAGGTGGCATTCCATCCACTAATGT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031984.9 ENSMUST00000204620.3 |
||
| 3UTR GCA 72 bp | AAACCCCATGGTCACCGTGATGTGAATGTCCTTGAATaGACCAAGTTGATATGTCCTCATCAATCAGGAATT | + |
|
Preference number: 3 (lower is better) Translates to: KPHGHRDVNVLE*TKLICPHQSGI Trigger: AATTCCTGATTGATGAGGACATATCAACTTGGTGCATTCAAGGACATTCACATCACGGTGACCATGGGGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031984.9 ENSMUST00000204620.3 |
||
| 3UTR CCA 72 bp | CTGCTGGCATACTTCCTTCATCAGCTTCATCTACTGTaGTCATGTCTTGCTCTAGTTTCAACTTTTGTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: LLAYFLHQLHLL*SCLALVSTFVG Trigger: ACCAACAAAAGTTGAAACTAGAGCAAGACATGACCACAGTAGATGAAGCTGATGAAGGAAGTATGCCAGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204620.3 |
||
| 3UTR CCA 72 bp | CTCTCCTTCACAGGCCCATTGATGTTTTTAGTAATGTaGCTATATCTGCTGGCATACTTCCTTCATCAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: LSFTGPLMFLVM*LYLLAYFLHQL Trigger: AAGCTGATGAAGGAAGTATGCCAGCAGATATAGCCACATTACTAAAAACATCAATGGGCCTGTGAAGGAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204620.3 |
||
| 3UTR-3UTR CAA 90 bp | CAACAATCAAATGAGGCCCTTTATTACCCTCTTGAAAGAGGTATGCCAGGAATGCATCAAATGGCCACGTaGTTTAACCAGGAGAAACAT | + |
|
Preference number: 3 (lower is better) Translates to: QQSNEALYYPLERGMPGMHQMAT*FNQEKH Trigger: ATGTTTCTCCTGGTTAAACAACGTGGCCATTTGATG...CATTCCTGGCATACCTCTTTCAAGAGGGTAATAAAGGGCCTCATTTGATTGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203411.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCCATCCGCCTCCATTCCCGGTGAGCATCGTAACTTGTTTGGTCAGTTTATTTAACTACGTCCCTTTCTaGAATTACCGTTTTGCAATT | + |
|
Preference number: 3 (lower is better) Translates to: FHPPPFPVSIVTCLVSLFNYVPF*NYRFAI Trigger: AATTGCAAAACGGTAATTCAAGAAAGGGACGTAGTT...AAATAAACTGACCAAACAAGTTACGATGCTCACCGGGAATGGAGGCGGATGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000203411.2 ENSMUST00000204620.3 |
||
| 3UTR TCA 72 bp | CTAAATTTCACTTTGTCACCCACACTGAACTGGAATTaGACAATGGCTTCTCTTCAGGTGGTTCTGTATTGG | + |
|
Preference number: 3 (lower is better) Translates to: LNFTLSPTLNWN*TMASLQVVLYW Trigger: CCAATACAGAACCACCTGAAGAGAAGCCATTGTTCAATTCCAGTTCAGTGTGGGTGACAAAGTGAAATTTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031984.9 ENSMUST00000204620.3 |
||
| 3UTR GCA 72 bp | CAACTCTATCACCCTTCTGTTTCAACTCAGACAAGATaGATCCTAAGGCTCGGAATTTCCCAGAATCTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: QLYHPSVSTQTR*ILRLGISQNLK Trigger: TTTTAGATTCTGGGAAATTCCGAGCCTTAGGATGCATCTTGTCTGAGTTGAAACAGAAGGGTGATAGAGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204620.3 |
||
| 3UTR-3UTR CAA 90 bp | AACAATGGCTTCTCTTCAGGTGGTTCTGTATTGGAAATCCTGGGAACTGGTAAACTTGAATGCACCAAGTaGATATGTCCTCATCAATCA | + |
|
Preference number: 3 (lower is better) Translates to: NNGFSSGGSVLEILGTGKLECTK*ICPHQS Trigger: TGATTGATGAGGACATATCAACTTGGTGCATTCAAG...TTTACCAGTTCCCAGGATTTCCAATACAGAACCACCTGAAGAGAAGCCATTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031984.9 ENSMUST00000204620.3 |
||
| 3UTR-3UTR CAA 90 bp | AACAATGGCTTCTCTTCAGGTGGTTCTGTATTGGAAATCCTGGGAACTGGTAAAGAGTTCTTACTGACATaGGTGAACATCTGCATCAAA | + |
|
Preference number: 3 (lower is better) Translates to: NNGFSSGGSVLEILGTGKEFLLT*VNICIK Trigger: TTTGATGCAGATGTTCACCAATGTCAGTAAGAACTC...TTTACCAGTTCCCAGGATTTCCAATACAGAACCACCTGAAGAGAAGCCATTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031984.9 ENSMUST00000204620.3 |
||
| 3UTR-3UTR CAA 90 bp | CTGGCATACTTCCTTCATCAGCTTCATCTACTGTGGTCATGTCTTGCTCTAGTTGGCCTTCATCAAAAATaGCATAATTCAGTTTCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: LAYFLHQLHLLWSCLALVGLHQK*HNSVSV Trigger: GACTGAAACTGAATTATGCAATTTTTGATGAAGGCC...AACTAGAGCAAGACATGACCACAGTAGATGAAGCTGATGAAGGAAGTATGCCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204620.3 |
||
| 3UTR-3UTR CAA 90 bp | GTGGGAGACACATTTCACACAGAAAAGTTAAGGGAAATTCACTGTGGGTTTAAAGTTAGTGGCAAAAAGTaGTCCATACTATGTGAAATG | + |
|
Preference number: 3 (lower is better) Translates to: VGDTFHTEKLREIHCGFKVSGKK*SILCEM Trigger: CATTTCACATAGTATGGACAACTTTTTGCCACTAAC...TTTAAACCCACAGTGAATTTCCCTTAACTTTTCTGTGTGAAATGTGTCTCCCAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
||
| 3UTR GCA 72 bp | CTTCCTTCATCAGCTTCATCTACTGTGGTCATGTCTTaGTCTAGTTTCAACTTTTGTTGGTTAATTTTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: LPSSASSTVVMS*SSFNFCWLIFS Trigger: GCTAAAAATTAACCAACAAAAGTTGAAACTAGAGCAAGACATGACCACAGTAGATGAAGCTGATGAAGGAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204620.3 |
||
| 3UTR TCA 72 bp | GCATTACCTTGGTATGAAGTCACATCCAGTTTCCTTTaGAGTGAAAGTATCTTTAAGTTAATCTGTTCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: ALPWYEVTSSFL*SESIFKLICSA Trigger: AGCAGAACAGATTAACTTAAAGATACTTTCACTTCAAAGGAAACTGGATGTGACTTCATACCAAGGTAATGC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031984.9 ENSMUST00000204620.3 |
||
| CDS-3UTR TCA 90 bp | AAAAGCCAGGAAAAGATGTCAGGTGCGGTGACATGTGGCTGGAATCCCAGCAACCGGGCCTGGGAGGGCTaGGGGGCTGCTTCGGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KSQEKMSGAVTCGWNPSNRAWEG*GAASGA Trigger: AGCACCCGAAGCAGCCCCTCAGCCCTCCCAGGCCCG...GTTGCTGGGATTCCAGCCACATGTCACCGCACCTGACATCTTTTCCTGGCTTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000204696.3 ENSMUST00000204955.2 ENSMUST00000205118.3 |
||
| CDS-3UTR TCA 90 bp | TCTGCAATCACTGGAGAAGGTAAGGCAGGGAGGGACACTGCTTTCAAAAAGCCACGGGCCTGGGAGGGCTaGGGGGCTGCTTCGGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SAITGEGKAGRDTAFKKPRAWEG*GAASGA Trigger: AGCACCCGAAGCAGCCCCTCAGCCCTCCCAGGCCCG...TGGCTTTTTGAAAGCAGTGTCCCTCCCTGCCTTACCTTCTCCAGTGATTGCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000204696.3 ENSMUST00000204955.2 ENSMUST00000205118.3 |
||
| CDS-3UTR TCA 90 bp | GGTCACCGTGATGTGAATGTCCTTGAATGCACCAAGTTGATATGTCCTCATCAACGGGCCTGGGAGGGCTaGGGGGCTGCTTCGGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GHRDVNVLECTKLICPHQRAWEG*GAASGA Trigger: AGCACCCGAAGCAGCCCCTCAGCCCTCCCAGGCCCG...TTGATGAGGACATATCAACTTGGTGCATTCAAGGACATTCACATCACGGTGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031984.9 ENSMUST00000204620.3 |
||
| CDS-3UTR TCA 90 bp | CTGCTGATCTTGGTGATTCAGCAGAAGGAAATGTGTAAGAGAAAACTGGAGCAGCGGGCCTGGGAGGGCTaGGGGGCTGCTTCGGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLILVIQQKEMCKRKLEQRAWEG*GAASGA Trigger: AGCACCCGAAGCAGCCCCTCAGCCCTCCCAGGCCCG...CTGCTCCAGTTTTCTCTTACACATTTCCTTCTGCTGAATCACCAAGATCAGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031984.9 ENSMUST00000204620.3 |
||
| CDS-3UTR TCA 90 bp | CTTCTGTGTTCAAGGCACCACATCAGTAGAGATAACAAAAGGCTCCAGAAAGAACGGGCCTGGGAGGGCTaGGGGGCTGCTTCGGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLCSRHHISRDNKRLQKERAWEG*GAASGA Trigger: AGCACCCGAAGCAGCCCCTCAGCCCTCCCAGGCCCG...TTCTTTCTGGAGCCTTTTGTTATCTCTACTGATGTGGTGCCTTGAACACAGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204114.3 |
||
| CDS-3UTR GCA 90 bp | CTGCAATCACTGGAGAAGGTAAGGCAGGGAGGGACACTGCTTTCAAAAAGCCAGGGAGGGCTGAGGGGCTaGTTCGGGTGCTTCCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LQSLEKVRQGGTLLSKSQGGLRG*FGCFLN Trigger: ATTGAGGAAGCACCCGAAGCAGCCCCTCAGCCCTCC...CTGGCTTTTTGAAAGCAGTGTCCCTCCCTGCCTTACCTTCTCCAGTGATTGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000204696.3 ENSMUST00000204955.2 ENSMUST00000205118.3 |
||
| CDS-3UTR GCA 90 bp | CAACTGGGAGGCAGAGGCAGAAGGATCACAAGTTCAAAGCCATCCAGTCCACGCAGGGGCTGCTTCGGGTaGTTCCTCAATCTTACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QLGGRGRRITSSKPSSPRRGCFG*FLNLTP Trigger: AGGAGTAAGATTGAGGAAGCACCCGAAGCAGCCCCT...GCGTGGACTGGATGGCTTTGAACTTGTGATCCTTCTGCCTCTGCCTCCCAGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000204696.3 ENSMUST00000204955.2 ENSMUST00000205118.3 |
||
| CDS-3UTR GCA 90 bp | GCTTTCAAAAAGCCAGGAAAAGATGTCAGGTGCGGTGACATGTGGCTGGAATCCGGAGGGCTGAGGGGCTaGTTCGGGTGCTTCCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: AFKKPGKDVRCGDMWLESGGLRG*FGCFLN Trigger: ATTGAGGAAGCACCCGAAGCAGCCCCTCAGCCCTCC...GGATTCCAGCCACATGTCACCGCACCTGACATCTTTTCCTGGCTTTTTGAAAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000204696.3 ENSMUST00000204955.2 ENSMUST00000205118.3 |
||
| CDS-3UTR GCA 90 bp | ACTGGAGAAGGTAAGGCAGGGAGGGACACTGCTTTCAAAAAGCCAGGAAAAGATGGAGGGCTGAGGGGCTaGTTCGGGTGCTTCCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: TGEGKAGRDTAFKKPGKDGGLRG*FGCFLN Trigger: ATTGAGGAAGCACCCGAAGCAGCCCCTCAGCCCTCC...ATCTTTTCCTGGCTTTTTGAAAGCAGTGTCCCTCCCTGCCTTACCTTCTCCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000204696.3 ENSMUST00000204955.2 ENSMUST00000205118.3 |
||
| CDS-3UTR GCA 90 bp | AAAAGCCAGGAAAAGATGTCAGGTGCGGTGACATGTGGCTGGAATCCCAGCAACCTGGGGTGTTTGCCCTaGTACCTTCCCCTTCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KSQEKMSGAVTCGWNPSNLGCLP*YLPLQH Trigger: ATGCTGAAGGGGAAGGTAGCAGGGCAAACACCCCAG...GTTGCTGGGATTCCAGCCACATGTCACCGCACCTGACATCTTTTCCTGGCTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000204696.3 ENSMUST00000204955.2 ENSMUST00000205118.3 |
||
| CDS-3UTR TCA 90 bp | CCAGGAAAAGATGTCAGGTGCGGTGACATGTGGCTGGAATCCCAGCAACTGGGATTTCTCAGTTACATCTaGGTCTGGGGTGTTTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PGKDVRCGDMWLESQQLGFLSYI*VWGVCP Trigger: AGGGCAAACACCCCAGACTCAGATGTAACTGAGAAA...TCCCAGTTGCTGGGATTCCAGCCACATGTCACCGCACCTGACATCTTTTCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000204696.3 ENSMUST00000204955.2 ENSMUST00000205118.3 |
||
| CDS-3UTR TCA 90 bp | CCAGCAACTGGGAGGCAGAGGCAGAAGGATCACAAGTTCAAAGCCATCCAGTCCTTTCTCAGTTACATCTaGGTCTGGGGTGTTTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PATGRQRQKDHKFKAIQSFLSYI*VWGVCP Trigger: AGGGCAAACACCCCAGACTCAGATGTAACTGAGAAA...GGACTGGATGGCTTTGAACTTGTGATCCTTCTGCCTCTGCCTCCCAGTTGCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000204696.3 ENSMUST00000204955.2 ENSMUST00000205118.3 |
||
| CDS-3UTR GCA 90 bp | GGAGAAGGTAAGGCAGGGAGGGACACTGCTTTCAAAAAGCCAGGAAAAGATGTCCTGGGGTGTTTGCCCTaGTACCTTCCCCTTCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GEGKAGRDTAFKKPGKDVLGCLP*YLPLQH Trigger: ATGCTGAAGGGGAAGGTAGCAGGGCAAACACCCCAG...GACATCTTTTCCTGGCTTTTTGAAAGCAGTGTCCCTCCCTGCCTTACCTTCTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000204696.3 ENSMUST00000204955.2 ENSMUST00000205118.3 |
||
| CDS-3UTR GCA 90 bp | AAACCCCATGGTCACCGTGATGTGAATGTCCTTGAATGCACCAAGTTGATATGTGGAGGGCTGAGGGGCTaGTTCGGGTGCTTCCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: KPHGHRDVNVLECTKLICGGLRG*FGCFLN Trigger: ATTGAGGAAGCACCCGAAGCAGCCCCTCAGCCCTCC...ACATATCAACTTGGTGCATTCAAGGACATTCACATCACGGTGACCATGGGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031984.9 ENSMUST00000204620.3 |
||
| CDS-3UTR GCA 90 bp | TGGAGGCTGGAACAACAATCAAATGAGGCCCTTTATTACCCTCTTGAAAGAGGTGGAGGGCTGAGGGGCTaGTTCGGGTGCTTCCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: WRLEQQSNEALYYPLERGGGLRG*FGCFLN Trigger: ATTGAGGAAGCACCCGAAGCAGCCCCTCAGCCCTCC...ACCTCTTTCAAGAGGGTAATAAAGGGCCTCATTTGATTGTTGTTCCAGCCTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204620.3 |
||
| CDS-3UTR GCA 90 bp | ACTGCTTTCAAAAAGCCAGGAAAAGATGTCAGGTGCGGTGACATGTGGCTGGAACTGGGGTGTTTGCCCTaGTACCTTCCCCTTCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TAFKKPGKDVRCGDMWLELGCLP*YLPLQH Trigger: ATGCTGAAGGGGAAGGTAGCAGGGCAAACACCCCAG...TTCCAGCCACATGTCACCGCACCTGACATCTTTTCCTGGCTTTTTGAAAGCAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000204696.3 ENSMUST00000204955.2 ENSMUST00000205118.3 |
||
| CDS-3UTR GCA 90 bp | CTTCTGTGTTCAAGGCACCACATCAGTAGAGATAACAAAAGGCTCCAGAAAGAAGGAGGGCTGAGGGGCTaGTTCGGGTGCTTCCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LLCSRHHISRDNKRLQKEGGLRG*FGCFLN Trigger: ATTGAGGAAGCACCCGAAGCAGCCCCTCAGCCCTCC...TTCTTTCTGGAGCCTTTTGTTATCTCTACTGATGTGGTGCCTTGAACACAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204114.3 |
||
| CDS-3UTR TCA 90 bp | TCCAACAACTTGACTAAGCGACCTGGGTACTGTGATCACAAGGAGGTAGCATTAGCACAGGTGTGCCTGTaGGCAATAAACGGTTACGTG | + |
|
Preference number: 4 (lower is better) Translates to: SNNLTKRPGYCDHKEVALAQVCL*AINGYV Trigger: CACGTAACCGTTTATTGCTCACAGGCACACCTGTGC...TAATGCTACCTCCTTGTGATCACAGTACCCAGGTCGCTTAGTCAAGTTGTTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
||
| CDS-3UTR TCA 90 bp | GAAGAAGAGGACCTGGGGACATTAGTGGATGGAATGCCACCTTGTGATTCAGGCACTTTTTCAATCTGTTaGAGAGGCCCGAGTAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: EEEDLGTLVDGMPPCDSGTFSIC*RGPSRA Trigger: AGCTCTACTCGGGCCTCTTCAACAGATTGAAAAAGT...GCCTGAATCACAAGGTGGCATTCCATCCACTAATGTCCCCAGGTCCTCTTCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
||
| CDS-3UTR GCA 90 bp | CCAAATGCCTTCTGTGTTCAAGGCACCACATCAGTAGAGATAACAAAAGGCTCCAGGGGCTGCTTCGGGTaGTTCCTCAATCTTACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PNAFCVQGTTSVEITKGSRGCFG*FLNLTP Trigger: AGGAGTAAGATTGAGGAAGCACCCGAAGCAGCCCCT...GGAGCCTTTTGTTATCTCTACTGATGTGGTGCCTTGAACACAGAAGGCATTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204114.3 |
||
| CDS-3UTR GCA 90 bp | AAACCCCATGGTCACCGTGATGTGAATGTCCTTGAATGCACCAAGTTGATATGTCTGGGGTGTTTGCCCTaGTACCTTCCCCTTCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KPHGHRDVNVLECTKLICLGCLP*YLPLQH Trigger: ATGCTGAAGGGGAAGGTAGCAGGGCAAACACCCCAG...ACATATCAACTTGGTGCATTCAAGGACATTCACATCACGGTGACCATGGGGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031984.9 ENSMUST00000204620.3 |
||
| CDS-3UTR GCA 90 bp | TCCAACAACTTGACTAAGCGACCTGGGTACTGTGATCACAAGGAGGTAGCATTAGGGTTGGCCTCACAGTaGGTAGGTTCCTTCAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: SNNLTKRPGYCDHKEVALGLASQ*VGSFSI Trigger: AATGCTGAAGGAACCTACGCACTGTGAGGCCAACCC...TAATGCTACCTCCTTGTGATCACAGTACCCAGGTCGCTTAGTCAAGTTGTTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
||
| 3UTR CAA 72 bp | GTCATAACTTCCATGTCTTCAAAGATCAGGTCAGGGTaGGCCTCACAGTGCGTAGGTTCCTTCAGCATTAGC | + |
|
Preference number: 4 (lower is better) Translates to: VITSMSSKIRSG*ASQCVGSFSIS Trigger: GCTAATGCTGAAGGAACCTACGCACTGTGAGGCCAACCCTGACCTGATCTTTGAAGACATGGAAGTTATGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204620.3 |
||
| CDS-3UTR TCA 90 bp | ACTGCTTTCAAAAAGCCAGGAAAAGATGTCAGGTGCGGTGACATGTGGCTGGAATTTCTCAGTTACATCTaGGTCTGGGGTGTTTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: TAFKKPGKDVRCGDMWLEFLSYI*VWGVCP Trigger: AGGGCAAACACCCCAGACTCAGATGTAACTGAGAAA...TTCCAGCCACATGTCACCGCACCTGACATCTTTTCCTGGCTTTTTGAAAGCAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000204696.3 ENSMUST00000204955.2 ENSMUST00000205118.3 |
||
| CDS-3UTR TCA 90 bp | TCCAACAACTTGACTAAGCGACCTGGGTACTGTGATCACAAGGAGGTAGCATTATTCTGCAGACTCATTTaGTTCTTCTCCACGGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SNNLTKRPGYCDHKEVALFCRLI*FFSTVP Trigger: GGGGACCGTGGAGAAGAATCAAATGAGTCTGCAGAA...TAATGCTACCTCCTTGTGATCACAGTACCCAGGTCGCTTAGTCAAGTTGTTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
||
| CDS-3UTR GCA 90 bp | TTCACTGTGGGTTTAAAAGGTACAATTTCCAACAACTTGACTAAGCGACCTGGGCTGGGGTGTTTGCCCTaGTACCTTCCCCTTCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FTVGLKGTISNNLTKRPGLGCLP*YLPLQH Trigger: ATGCTGAAGGGGAAGGTAGCAGGGCAAACACCCCAG...CCCAGGTCGCTTAGTCAAGTTGTTGGAAATTGTACCTTTTAAACCCACAGTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
||
| CDS-3UTR GCA 90 bp | TCCAACAACTTGACTAAGCGACCTGGGTACTGTGATCACAAGGAGGTAGCATTAGCTTTTCCCAGTTGCTaGTGGCTTCTGCAGACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SNNLTKRPGYCDHKEVALAFPSC*WLLQTH Trigger: ATGAGTCTGCAGAAGCCAGCAGCAACTGGGAAAAGC...TAATGCTACCTCCTTGTGATCACAGTACCCAGGTCGCTTAGTCAAGTTGTTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
||
| CDS-3UTR CCA 90 bp | GAAGAAGAGGACCTGGGGACATTAGTGGATGGAATGCCACCTTGTGATTCAGGCATCTATGGTGGAGGCTaGAACAACAATCAAATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EEEDLGTLVDGMPPCDSGIYGGG*NNNQMR Trigger: CCTCATTTGATTGTTGTTCCAGCCTCCACCATAGAT...GCCTGAATCACAAGGTGGCATTCCATCCACTAATGTCCCCAGGTCCTCTTCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
||
| CDS-3UTR TCA 90 bp | GAAGAAGAGGACCTGGGGACATTAGTGGATGGAATGCCACCTTGTGATTCAGGCATCTTCAGATGGCTCTaGAACTATAATCACTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: EEEDLGTLVDGMPPCDSGIFRWL*NYNHCV Trigger: GACACAGTGATTATAGTTTCAGAGCCATCTGAAGAT...GCCTGAATCACAAGGTGGCATTCCATCCACTAATGTCCCCAGGTCCTCTTCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
||
| CDS-3UTR GCA 90 bp | TTCACTGTGGGTTTAAAAGGTACAATTTCCAACAACTTGACTAAGCGACCTGGGAGGGGCTGCTTCGGGTaGTTCCTCAATCTTACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FTVGLKGTISNNLTKRPGRGCFG*FLNLTP Trigger: AGGAGTAAGATTGAGGAAGCACCCGAAGCAGCCCCT...CCCAGGTCGCTTAGTCAAGTTGTTGGAAATTGTACCTTTTAAACCCACAGTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
||
| CDS-3UTR GCA 90 bp | ATCTTAGCCAAATGCCTTCTGTGTTCAAGGCACCACATCAGTAGAGATAACAAACTGGGGTGTTTGCCCTaGTACCTTCCCCTTCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ILAKCLLCSRHHISRDNKLGCLP*YLPLQH Trigger: ATGCTGAAGGGGAAGGTAGCAGGGCAAACACCCCAG...TTTGTTATCTCTACTGATGTGGTGCCTTGAACACAGAAGGCATTTGGCTAAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204114.3 |
||
| 3UTR CAA 72 bp | GGTCACCGTGATGTGAATGTCCTTGAATGCACCAAGTaGATATGTCCTCATCAATCAGGAATTCCGCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GHRDVNVLECTK*ICPHQSGIPRS Trigger: AGAGCGCGGAATTCCTGATTGATGAGGACATATCAACTTGGTGCATTCAAGGACATTCACATCACGGTGACC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031984.9 ENSMUST00000204620.3 |
||
| CDS-3UTR TCA 90 bp | GGTCACCGTGATGTGAATGTCCTTGAATGCACCAAGTTGATATGTCCTCATCAATTTCTCAGTTACATCTaGGTCTGGGGTGTTTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GHRDVNVLECTKLICPHQFLSYI*VWGVCP Trigger: AGGGCAAACACCCCAGACTCAGATGTAACTGAGAAA...TTGATGAGGACATATCAACTTGGTGCATTCAAGGACATTCACATCACGGTGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031984.9 ENSMUST00000204620.3 |
||
| CDS-3UTR TCA 90 bp | CTGGCATACTTCCTTCATCAGCTTCATCTACTGTGGTCATGTCTTGCTCTAGTTTTTCTCAGTTACATCTaGGTCTGGGGTGTTTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LAYFLHQLHLLWSCLALVFLSYI*VWGVCP Trigger: AGGGCAAACACCCCAGACTCAGATGTAACTGAGAAA...AACTAGAGCAAGACATGACCACAGTAGATGAAGCTGATGAAGGAAGTATGCCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204620.3 |
||
| CDS-3UTR TCA 90 bp | TCCAACAACTTGACTAAGCGACCTGGGTACTGTGATCACAAGGAGGTAGCATTAGGTCATCAGAGCTGCTaGTTGCACAATTATACGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SNNLTKRPGYCDHKEVALGHQSC*LHNYTL Trigger: CAACGTATAATTGTGCAATCAGCAGCTCTGATGACC...TAATGCTACCTCCTTGTGATCACAGTACCCAGGTCGCTTAGTCAAGTTGTTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
||
| CDS-3UTR GCA 90 bp | TTAACCAGTTATCTATGGTGGAGGCTGGAACAACAATCAAATGAGGCCCTTTATAGGGGCTGCTTCGGGTaGTTCCTCAATCTTACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LTSYLWWRLEQQSNEALYRGCFG*FLNLTP Trigger: AGGAGTAAGATTGAGGAAGCACCCGAAGCAGCCCCT...ATAAAGGGCCTCATTTGATTGTTGTTCCAGCCTCCACCATAGATAACTGGTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204620.3 |
||
| CDS-3UTR GCA 90 bp | TGTGAGGATCTGGAGAATCCAGTTAGTGGCAAAAAGTTGTCCATACTATGTGAACCTGGGTCCACCACCTaGATCACCAAACATCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: CEDLENPVSGKKLSILCEPGSTT*ITKHQQ Trigger: TTGCTGATGTTTGGTGATGCAGGTGGTGGACCCAGG...TTCACATAGTATGGACAACTTTTTGCCACTAACTGGATTCTCCAGATCCTCACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
||
| CDS-3UTR GCA 90 bp | AACAATGGCTTCTCTTCAGGTGGTTCTGTATTGGAAATCCTGGGAACTGGTAAACTTGCTTTTCCCAGTTaGTGCTGGCTTCTGCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: NNGFSSGGSVLEILGTGKLAFPS*CWLLQT Trigger: AGTCTGCAGAAGCCAGCAGCAACTGGGAAAAGCAAG...TTTACCAGTTCCCAGGATTTCCAATACAGAACCACCTGAAGAGAAGCCATTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
||
| CDS-3UTR GCA 90 bp | GGTCACCGTGATGTGAATGTCCTTGAATGCACCAAGTTGATATGTCCTCATCAAATGCCATTAAGTCCATaGTTATGCACCAACGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GHRDVNVLECTKLICPHQMPLSP*LCTNAS Trigger: GCTGGCGTTGGTGCATAAGCATGGACTTAATGGCAT...TTGATGAGGACATATCAACTTGGTGCATTCAAGGACATTCACATCACGGTGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
||
| 3UTR CAA 72 bp | CTCCTTCACTCTCCTGAGGATGAAGGGCTTAATGATTaGCTTCGCGTGGGCTATTCTCTCCTTTTCGTATAT | + |
|
Preference number: 4 (lower is better) Translates to: LLHSPEDEGLND*LRVGYSLLFVY Trigger: ATATACGAAAAGGAGAGAATAGCCCACGCGAAGCAAATCATTAAGCCCTTCATCCTCAGGAGAGTGAAGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204620.3 |
||
| 3UTR CAA 72 bp | TCAATCAGGAATTCCGCGCTCTCCTTCACAGGCCCATaGATGTTTTTAGTAATGTGGCTATATCTGCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SIRNSALSFTGP*MFLVMWLYLLA Trigger: TGCCAGCAGATATAGCCACATTACTAAAAACATCAATGGGCCTGTGAAGGAGAGCGCGGAATTCCTGATTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204620.3 |
||
| CDS-3UTR TCA 90 bp | TGTGTTCAAGGCACCACATCAGTAGAGATAACAAAAGGCTCCAGAAAGAAGGTATTTCTCAGTTACATCTaGGTCTGGGGTGTTTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CVQGTTSVEITKGSRKKVFLSYI*VWGVCP Trigger: AGGGCAAACACCCCAGACTCAGATGTAACTGAGAAA...TACCTTCTTTCTGGAGCCTTTTGTTATCTCTACTGATGTGGTGCCTTGAACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204114.3 |
||
| CDS-3UTR GCA 90 bp | TCCAACAACTTGACTAAGCGACCTGGGTACTGTGATCACAAGGAGGTAGCATTAGAGGTATGCCAGGAATaGAATGGCTTGAATGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SNNLTKRPGYCDHKEVALEVCQE*NGLNGF Trigger: AAAACCATTCAAGCCATTGCATTCCTGGCATACCTC...TAATGCTACCTCCTTGTGATCACAGTACCCAGGTCGCTTAGTCAAGTTGTTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
||
| CDS-3UTR GCA 90 bp | GAAGAAGAGGACCTGGGGACATTAGTGGATGGAATGCCACCTTGTGATTCAGGCTGTCATTGTATGGATTaGAATCAATGTCGTGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: EEEDLGTLVDGMPPCDSGCHCMD*NQCREV Trigger: TACTTCACGACATTGATTGCAATCCATACAATGACA...GCCTGAATCACAAGGTGGCATTCCATCCACTAATGTCCCCAGGTCCTCTTCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
||
| CDS-3UTR CCA 90 bp | AAACCCCATGGTCACCGTGATGTGAATGTCCTTGAATGCACCAAGTTGATATGTATAATTTCCTTTTCCTaGGTCCACCACCTGCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: KPHGHRDVNVLECTKLICIISFS*VHHLHH Trigger: GTGATGCAGGTGGTGGACCCAGGAAAAGGAAATTAT...ACATATCAACTTGGTGCATTCAAGGACATTCACATCACGGTGACCATGGGGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
||
| CDS-3UTR CCA 90 bp | TCCAACAACTTGACTAAGCGACCTGGGTACTGTGATCACAAGGAGGTAGCATTATTGAGTGACAAACTTTaGTTTAGAAGGGAGGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SNNLTKRPGYCDHKEVALLSDKL*FRREGC Trigger: ACAGCCCTCCCTTCTAAACCAAAGTTTGTCACTCAA...TAATGCTACCTCCTTGTGATCACAGTACCCAGGTCGCTTAGTCAAGTTGTTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
||
| CDS-3UTR CCA 90 bp | AAACCCCATGGTCACCGTGATGTGAATGTCCTTGAATGCACCAAGTTGATATGTATGATTTGCTTCGCGTaGGCTATTCTCTCCTTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: KPHGHRDVNVLECTKLICMICFA*AILSFS Trigger: CGAAAAGGAGAGAATAGCCCACGCGAAGCAAATCAT...ACATATCAACTTGGTGCATTCAAGGACATTCACATCACGGTGACCATGGGGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
||
| CDS-3UTR CCA 90 bp | GGTCACCGTGATGTGAATGTCCTTGAATGCACCAAGTTGATATGTCCTCATCAATGTGGCTATATCTGCTaGCATACTTCCTTCATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GHRDVNVLECTKLICPHQCGYIC*HTSFIS Trigger: GCTGATGAAGGAAGTATGCCAGCAGATATAGCCACA...TTGATGAGGACATATCAACTTGGTGCATTCAAGGACATTCACATCACGGTGACC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
||
| 3UTR CAA 72 bp | CATCCGCCTCCATTCCCGGTGAGCATCGTAACTTGTTaGGTCAGTTTATTTGAAATGTCCTCACATTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HPPPFPVSIVTC*VSLFEMSSHLF Trigger: GAACAAATGTGAGGACATTTCAAATAAACTGACCAAACAAGTTACGATGCTCACCGGGAATGGAGGCGGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203411.2 ENSMUST00000204620.3 |
||
| CDS-3UTR TCA 90 bp | TCCAACAACTTGACTAAGCGACCTGGGTACTGTGATCACAAGGAGGTAGCATTATTCTCAATTGCATCATaGCATTGCACATCTCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SNNLTKRPGYCDHKEVALFSIAS*HCTSLC Trigger: ACACAGAGATGTGCAATGTCATGATGCAATTGAGAA...TAATGCTACCTCCTTGTGATCACAGTACCCAGGTCGCTTAGTCAAGTTGTTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
||
| CDS-3UTR GCA 90 bp | AAACCCCATGGTCACCGTGATGTGAATGTCCTTGAATGCACCAAGTTGATATGTGTGTACATCCACTCATaGTCCTTAAGCACTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KPHGHRDVNVLECTKLICVYIHS*SLSTSL Trigger: AAGAGAAGTGCTTAAGGAGCATGAGTGGATGTACAC...ACATATCAACTTGGTGCATTCAAGGACATTCACATCACGGTGACCATGGGGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
||
| CDS-3UTR GCA 90 bp | AAACCCCATGGTCACCGTGATGTGAATGTCCTTGAATGCACCAAGTTGATATGTTCACTTCTTCACAACTaGTATAGTCCTCATCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: KPHGHRDVNVLECTKLICSLLHN*YSPHPV Trigger: CACTGGATGAGGACTATAGCAGTTGTGAAGAAGTGA...ACATATCAACTTGGTGCATTCAAGGACATTCACATCACGGTGACCATGGGGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
||
| CDS-3UTR GCA 90 bp | CAACATCTGCTGATCTTGGTGATTCAGCAGAAGGAAATGTGTAAGAGAAAACTGTTAAGTCCATGCTTATaGACCAACGCCAGCCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QHLLILVIQQKEMCKRKLLSPCL*TNASQF Trigger: GAACTGGCTGGCGTTGGTGCATAAGCATGGACTTAA...CAGTTTTCTCTTACACATTTCCTTCTGCTGAATCACCAAGATCAGCAGATGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
||
| CDS-3UTR GCA 90 bp | CAACATCTGCTGATCTTGGTGATTCAGCAGAAGGAAATGTGTAAGAGAAAACTGTCTAGCAGATTATTCTaGACAGGTGTGCCTGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QHLLILVIQQKEMCKRKLSSRLF*TGVPVS Trigger: GCTCACAGGCACACCTGTGCAGAATAATCTGCTAGA...CAGTTTTCTCTTACACATTTCCTTCTGCTGAATCACCAAGATCAGCAGATGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
||
| CDS-3UTR GCA 90 bp | AAACCCCATGGTCACCGTGATGTGAATGTCCTTGAATGCACCAAGTTGATATGTTCAACTCAGACAAGATaGATCCTAAGGCTCGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: KPHGHRDVNVLECTKLICSTQTR*ILRLGI Trigger: AATTCCGAGCCTTAGGATGCATCTTGTCTGAGTTGA...ACATATCAACTTGGTGCATTCAAGGACATTCACATCACGGTGACCATGGGGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
||
| 3UTR CAA 72 bp | TTCACTGTGGGTTTAAAAGGTACAATTTCCAACAACTaGACTAAGCGACCTGGGTACTGTGATCACAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FTVGLKGTISNN*TKRPGYCDHKE Trigger: CTCCTTGTGATCACAGTACCCAGGTCGCTTAGTCAAGTTGTTGGAAATTGTACCTTTTAAACCCACAGTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
||
| CDS-3UTR GCA 90 bp | CAAGTGAATTCTGGAGATTTCCAAAAAGTTAGGTGGAAGGAGTATTTCTTTAACAGGGGCTGCTTCGGGTaGTTCCTCAATCTTACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QVNSGDFQKVRWKEYFFNRGCFG*FLNLTP Trigger: AGGAGTAAGATTGAGGAAGCACCCGAAGCAGCCCCT...GTTAAAGAAATACTCCTTCCACCTAACTTTTTGGAAATCTCCAGAATTCACTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204696.3 |
||
| CDS-3UTR GCA 90 bp | CTGCTGATCTTGGTGATTCAGCAGAAGGAAATGTGTAAGAGAAAACTGGAGCAGAACACAATACTTTCTTaGTTTTCCCAGTTGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLILVIQQKEMCKRKLEQNTILS*FSQLLL Trigger: CAGCAGCAACTGGGAAAAGCAAGAAAGTATTGTGTT...CTGCTCCAGTTTTCTCTTACACATTTCCTTCTGCTGAATCACCAAGATCAGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
||
| CDS-3UTR CCA 90 bp | CTGCTGATCTTGGTGATTCAGCAGAAGGAAATGTGTAAGAGAAAACTGGAGCAGATGCCAGGAATGCAATaGCTTGAATGGTTTTTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: LLILVIQQKEMCKRKLEQMPGMQ*LEWFFL Trigger: TAGGAAAAACCATTCAAGCCATTGCATTCCTGGCAT...CTGCTCCAGTTTTCTCTTACACATTTCCTTCTGCTGAATCACCAAGATCAGCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
||
| 3UTR CAA 72 bp | TGGAACAACAATCAAATGAGGCCCTTTATTACCCTCTaGAAAGAGGTATGCCAGGAATGCAATGGCTTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: WNNNQMRPFITL*KEVCQECNGLN Trigger: ATTCAAGCCATTGCATTCCTGGCATACCTCTTTCAAGAGGGTAATAAAGGGCCTCATTTGATTGTTGTTCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203411.2 ENSMUST00000204620.3 |
||
| CDS-3UTR TCA 90 bp | TGTGAGGATCTGGAGAATCCAGTTAGTGGCAAAAAGTTGTCCATACTATGTGAAGGCTGTTTTACAGACTaGTCATCATTAACGTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: CEDLENPVSGKKLSILCEGCFTD*SSLTSS Trigger: GGATGACGTTAATGATGATCAGTCTGTAAAACAGCC...TTCACATAGTATGGACAACTTTTTGCCACTAACTGGATTCTCCAGATCCTCACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
||
| CDS-3UTR TCA 90 bp | CAACATCTGCTGATCTTGGTGATTCAGCAGAAGGAAATGTGTAAGAGAAAACTGGGAACAACAATCAAATaGGGCCCTTTATTACCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QHLLILVIQQKEMCKRKLGTTIK*GPLLPS Trigger: AGAGGGTAATAAAGGGCCTCATTTGATTGTTGTTCC...CAGTTTTCTCTTACACATTTCCTTCTGCTGAATCACCAAGATCAGCAGATGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
||
| CDS-3UTR TCA 90 bp | TTCACTGTGGGTTTAAAAGGTACAATTTCCAACAACTTGACTAAGCGACCTGGGATCCTTTCAGAAATCTaGGTCTTTCCATCTAATCGG | + |
|
Preference number: 4 (lower is better) Translates to: FTVGLKGTISNNLTKRPGILSEI*VFPSNR Trigger: CCGATTAGATGGAAAGACTCAGATTTCTGAAAGGAT...CCCAGGTCGCTTAGTCAAGTTGTTGGAAATTGTACCTTTTAAACCCACAGTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
||
| CDS-3UTR TCA 90 bp | AAACCCCATGGTCACCGTGATGTGAATGTCCTTGAATGCACCAAGTTGATATGTTCCACCAGCTTTAGTTaGCAAGAGAAATACAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: KPHGHRDVNVLECTKLICSTSFS*QEKYKD Trigger: ATCTTTGTATTTCTCTTGTCAACTAAAGCTGGTGGA...ACATATCAACTTGGTGCATTCAAGGACATTCACATCACGGTGACCATGGGGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
||
| CDS-3UTR GCA 90 bp | GGTCACCGTGATGTGAATGTCCTTGAATGCACCAAGTTGATATGTCCTCATCAAATCAGAGCTGCTGATTaGACAATTATACGTTGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: GHRDVNVLECTKLICPHQIRAAD*TIIRCN Trigger: GTTACAACGTATAATTGTGCAATCAGCAGCTCTGAT...TTGATGAGGACATATCAACTTGGTGCATTCAAGGACATTCACATCACGGTGACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
||
| CDS-3UTR CCA 90 bp | CAACATCTGCTGATCTTGGTGATTCAGCAGAAGGAAATGTGTAAGAGAAAACTGATTGTCTGGCGGTTCTaGAACACTAGAATCTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QHLLILVIQQKEMCKRKLIVWRF*NTRIFC Trigger: ACAGAAGATTCTAGTGTTCCAGAACCGCCAGACAAT...CAGTTTTCTCTTACACATTTCCTTCTGCTGAATCACCAAGATCAGCAGATGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031984.9 ENSMUST00000204620.3 |
||
| CDS-3UTR CCA 90 bp | TTAACCAGTTATCTATGGTGGAGGCTGGAACAACAATCAAATGAGGCCCTTTATATTGTCTGGCGGTTCTaGAACACTAGAATCTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LTSYLWWRLEQQSNEALYIVWRF*NTRIFC Trigger: ACAGAAGATTCTAGTGTTCCAGAACCGCCAGACAAT...ATAAAGGGCCTCATTTGATTGTTGTTCCAGCCTCCACCATAGATAACTGGTTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204620.3 |
||
| CDS-3UTR CCA 90 bp | AAACCCCATGGTCACCGTGATGTGAATGTCCTTGAATGCACCAAGTTGATATGTACTGTCACTTCTTTGTaGAAACAGTTCCTTCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: KPHGHRDVNVLECTKLICTVTSL*KQFLQC Trigger: ACATTGAAGGAACTGTTTCCACAAAGAAGTGACAGT...ACATATCAACTTGGTGCATTCAAGGACATTCACATCACGGTGACCATGGGGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
||
| CDS-3UTR CCA 90 bp | AAACCCCATGGTCACCGTGATGTGAATGTCCTTGAATGCACCAAGTTGATATGTGTAGTAAAGGGTGATTaGCCATTTTTCTCAATTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KPHGHRDVNVLECTKLICVVKGD*PFFSIA Trigger: TGCAATTGAGAAAAATGGCCAATCACCCTTTACTAC...ACATATCAACTTGGTGCATTCAAGGACATTCACATCACGGTGACCATGGGGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
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| CDS-3UTR TCA 90 bp | GTGGGAGACACATTTCACACAGAAAAGTTAAGGGAAATTCACTGTGGGTTTAAAAAGGTCTTCCAGTTCTaGACTGTCATTTCTTCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VGDTFHTEKLREIHCGFKKVFQF*TVISSC Trigger: ACACGAAGAAATGACAGTTCAGAACTGGAAGACCTT...TTTAAACCCACAGTGAATTTCCCTTAACTTTTCTGTGTGAAATGTGTCTCCCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
||
| CDS-3UTR TCA 90 bp | TTCACTGTGGGTTTAAAAGGTACAATTTCCAACAACTTGACTAAGCGACCTGGGAGTTCCTTCAATGTCTaGAGCTTAGCATCTTTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FTVGLKGTISNNLTKRPGSSFNV*SLASLR Trigger: TCTTAAAGATGCTAAGCTTCAGACATTGAAGGAACT...CCCAGGTCGCTTAGTCAAGTTGTTGGAAATTGTACCTTTTAAACCCACAGTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
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| CDS-3UTR TCA 90 bp | TGGAACAACAATCAAATGAGGCCCTTTATTACCCTCTTGAAAGAGGTATGCCAGAGTCAGTTCAGCAATTaGAGAAACTTGAAGGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: WNNNQMRPFITLLKEVCQSQFSN*RNLKEM Trigger: CATTTCCTTCAAGTTTCTTCAATTGCTGAACTGACT...CTGGCATACCTCTTTCAAGAGGGTAATAAAGGGCCTCATTTGATTGTTGTTCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203411.2 |
||
| CDS-3UTR TCA 90 bp | GTGGGAGACACATTTCACACAGAAAAGTTAAGGGAAATTCACTGTGGGTTTAAACCTTTATTACCCTCTTaGAAGAGGTATGCCAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: VGDTFHTEKLREIHCGFKPLLPS*KRYARN Trigger: ATTCCTGGCATACCTCTTTCAAGAGGGTAATAAAGG...TTTAAACCCACAGTGAATTTCCCTTAACTTTTCTGTGTGAAATGTGTCTCCCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
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| CDS-3UTR TCA 90 bp | GTGGGAGACACATTTCACACAGAAAAGTTAAGGGAAATTCACTGTGGGTTTAAAAATACTTCTTTAGTCTaGCCAACTCTATGGCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: VGDTFHTEKLREIHCGFKNTSLV*PTLWHL Trigger: CAGGTGCCATAGAGTTGGTCAGACTAAAGAAGTATT...TTTAAACCCACAGTGAATTTCCCTTAACTTTTCTGTGTGAAATGTGTCTCCCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
||
| CDS-3UTR GCA 90 bp | AACAATGGCTTCTCTTCAGGTGGTTCTGTATTGGAAATCCTGGGAACTGGTAAAACTGTGGTCATGTCTTaGTCTAGTTTCAACTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NNGFSSGGSVLEILGTGKTVVMS*SSFNFC Trigger: ACAAAAGTTGAAACTAGAGCAAGACATGACCACAGT...TTTACCAGTTCCCAGGATTTCCAATACAGAACCACCTGAAGAGAAGCCATTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
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| CDS-3UTR CCA 90 bp | CAGGTGGTTCTGTATTGGAAATCCTGGGAACTGGTAAATTATATTTTGTTAAGATTTCCCAGTTGCTGCTaGCTTCTGCAGACTCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: QVVLYWKSWELVNYILLRFPSCC*LLQTHL Trigger: CAAATGAGTCTGCAGAAGCCAGCAGCAACTGGGAAA...TCTTAACAAAATATAATTTACCAGTTCCCAGGATTTCCAATACAGAACCACCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
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| CDS-3UTR CCA 90 bp | CAACATCTGCTGATCTTGGTGATTCAGCAGAAGGAAATGTGTAAGAGAAAACTGTTAACCAGTTATCTATaGTGGAGGCTGGAACAACAA | + |
|
Preference number: 4 (lower is better) Translates to: QHLLILVIQQKEMCKRKLLTSYL*WRLEQQ Trigger: TTGTTGTTCCAGCCTCCACCATAGATAACTGGTTAA...CAGTTTTCTCTTACACATTTCCTTCTGCTGAATCACCAAGATCAGCAGATGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
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| CDS-3UTR CCA 90 bp | CTGCTGATCTTGGTGATTCAGCAGAAGGAAATGTGTAAGAGAAAACTGGAGCAGAGCATCATGGTAAACTaGCTGAATAATACAACTCTA | + |
|
Preference number: 4 (lower is better) Translates to: LLILVIQQKEMCKRKLEQSIMVN*LNNTTL Trigger: TAGAGTTGTATTATTCAGCCAGTTTACCATGATGCT...CTGCTCCAGTTTTCTCTTACACATTTCCTTCTGCTGAATCACCAAGATCAGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
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| CDS-3UTR CCA 90 bp | CTGCTGATCTTGGTGATTCAGCAGAAGGAAATGTGTAAGAGAAAACTGGAGCAGTTGTTTGTCATTGTATaGATTGCAATCAATGTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLILVIQQKEMCKRKLEQLFVIV*IAINVV Trigger: CACGACATTGATTGCAATCCATACAATGACAAACAA...CTGCTCCAGTTTTCTCTTACACATTTCCTTCTGCTGAATCACCAAGATCAGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
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| CDS-3UTR CCA 90 bp | GGTCACCGTGATGTGAATGTCCTTGAATGCACCAAGTTGATATGTCCTCATCAAATGTTTTTAGTAATGTaGCTATATCTGCTGGCATAC | + |
|
Preference number: 4 (lower is better) Translates to: GHRDVNVLECTKLICPHQMFLVM*LYLLAY Trigger: GTATGCCAGCAGATATAGCCACATTACTAAAAACAT...TTGATGAGGACATATCAACTTGGTGCATTCAAGGACATTCACATCACGGTGACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
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| CDS-3UTR TCA 90 bp | CAACATCTGCTGATCTTGGTGATTCAGCAGAAGGAAATGTGTAAGAGAAAACTGAGTCAGTTCAGCAATTaGAGAAACTTGAAGGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: QHLLILVIQQKEMCKRKLSQFSN*RNLKEM Trigger: CATTTCCTTCAAGTTTCTTCAATTGCTGAACTGACT...CAGTTTTCTCTTACACATTTCCTTCTGCTGAATCACCAAGATCAGCAGATGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
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| CDS-3UTR GCA 90 bp | TGTGAGGATCTGGAGAATCCAGTTAGTGGCAAAAAGTTGTCCATACTATGTGAAGCCATTTTTCTCAATTaGATCATGACATTGCACATC | + |
|
Preference number: 4 (lower is better) Translates to: CEDLENPVSGKKLSILCEAIFLN*IMTLHI Trigger: GATGTGCAATGTCATGATGCAATTGAGAAAAATGGC...TTCACATAGTATGGACAACTTTTTGCCACTAACTGGATTCTCCAGATCCTCACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
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| CDS-3UTR CCA 90 bp | GTGGGAGACACATTTCACACAGAAAAGTTAAGGGAAATTCACTGTGGGTTTAAAACAGAAGGAAGGTCATaGGATTCTTCATCTTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VGDTFHTEKLREIHCGFKTEGRS*DSSSSD Trigger: ATCTGAAGATGAAGAATCCCATGACCTTCCTTCTGT...TTTAAACCCACAGTGAATTTCCCTTAACTTTTCTGTGTGAAATGTGTCTCCCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
||
| CDS-3UTR TCA 90 bp | CAGGTGGTTCTGTATTGGAAATCCTGGGAACTGGTAAATTATATTTTGTTAAGACCTTCTGATAGGGCTTaGGTGACAAACTTTGGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: QVVLYWKSWELVNYILLRPSDRA*VTNFGL Trigger: TAAACCAAAGTTTGTCACTCAAGCCCTATCAGAAGG...TCTTAACAAAATATAATTTACCAGTTCCCAGGATTTCCAATACAGAACCACCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
||
| CDS-3UTR CCA 90 bp | TGTGAGGATCTGGAGAATCCAGTTAGTGGCAAAAAGTTGTCCATACTATGTGAATGTACTGGAACAATTTaGAGAAACATCTTCAGTATC | + |
|
Preference number: 4 (lower is better) Translates to: CEDLENPVSGKKLSILCECTGTI*RNIFSI Trigger: GATACTGAAGATGTTTCTCCAAATTGTTCCAGTACA...TTCACATAGTATGGACAACTTTTTGCCACTAACTGGATTCTCCAGATCCTCACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031984.9 ENSMUST00000204620.3 |
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| CDS-3UTR CCA 90 bp | CAGGTGGTTCTGTATTGGAAATCCTGGGAACTGGTAAATTATATTTTGTTAAGAACCAGTTATCTATGGTaGAGGCTGGAACAACAATCA | + |
|
Preference number: 4 (lower is better) Translates to: QVVLYWKSWELVNYILLRTSYLW*RLEQQS Trigger: TGATTGTTGTTCCAGCCTCCACCATAGATAACTGGT...TCTTAACAAAATATAATTTACCAGTTCCCAGGATTTCCAATACAGAACCACCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
||
| CDS-3UTR CCA 90 bp | CAGGTGGTTCTGTATTGGAAATCCTGGGAACTGGTAAATTATATTTTGTTAAGACAGCTTCATCTACTGTaGTCATGTCTTGCTCTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: QVVLYWKSWELVNYILLRQLHLL*SCLALV Trigger: AACTAGAGCAAGACATGACCACAGTAGATGAAGCTG...TCTTAACAAAATATAATTTACCAGTTCCCAGGATTTCCAATACAGAACCACCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
||
| CDS-3UTR GCA 90 bp | CAGGTGGTTCTGTATTGGAAATCCTGGGAACTGGTAAATTATATTTTGTTAAGAGGAAATGAAGAATTTTaGCTTTATAGCCGTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QVVLYWKSWELVNYILLRGNEEF*LYSRPP Trigger: TGGAGGACGGCTATAAAGGCAAAATTCTTCATTTCC...TCTTAACAAAATATAATTTACCAGTTCCCAGGATTTCCAATACAGAACCACCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
||
| CDS-3UTR CCA 90 bp | ACTGCGGTCATCAGAGCTGCTGATTGCACAATTATACGTTGTAACAATTACATTTGTACTGGAACAATTTaGAGAAACATCTTCAGTATC | + |
|
Preference number: 4 (lower is better) Translates to: TAVIRAADCTIIRCNNYICTGTI*RNIFSI Trigger: GATACTGAAGATGTTTCTCCAAATTGTTCCAGTACA...AATGTAATTGTTACAACGTATAATTGTGCAATCAGCAGCTCTGATGACCGCAGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204620.3 |
||
| CDS-3UTR CCA 90 bp | GTGGGAGACACATTTCACACAGAAAAGTTAAGGGAAATTCACTGTGGGTTTAAATCTCTTGAACTGTACTaGAACAATTTGGAGAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: VGDTFHTEKLREIHCGFKSLELY*NNLEKH Trigger: ATGTTTCTCCAAATTGTTCCAGTACAGTTCAAGAGA...TTTAAACCCACAGTGAATTTCCCTTAACTTTTCTGTGTGAAATGTGTCTCCCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
||
| CDS-3UTR CAA 90 bp | GAAGAAGAGGACCTGGGGACATTAGTGGATGGAATGCCACCTTGTGATTCAGGCCCCTTTATTACCCTCTaGAAAGAGGTATGCCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: EEEDLGTLVDGMPPCDSGPFITL*KEVCQE Trigger: TTCCTGGCATACCTCTTTCAAGAGGGTAATAAAGGG...GCCTGAATCACAAGGTGGCATTCCATCCACTAATGTCCCCAGGTCCTCTTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
||
| CDS-3UTR CAA 90 bp | GGTCACCGTGATGTGAATGTCCTTGAATGCACCAAGTTGATATGTCCTCATCAAAAGATCAGGTCAGGGTaGGCCTCACAGTGCGTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: GHRDVNVLECTKLICPHQKIRSG*ASQCVG Trigger: ACCTACGCACTGTGAGGCCAACCCTGACCTGATCTT...TTGATGAGGACATATCAACTTGGTGCATTCAAGGACATTCACATCACGGTGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
||
| CDS-3UTR CAA 90 bp | TTCACTGTGGGTTTAAAAGGTACAATTTCCAACAACTTGACTAAGCGACCTGGGTCTTGCTTTTCCCAGTaGCTGCTGGCTTCTGCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: FTVGLKGTISNNLTKRPGSCFSQ*LLASAD Trigger: GTCTGCAGAAGCCAGCAGCAACTGGGAAAAGCAAGA...CCCAGGTCGCTTAGTCAAGTTGTTGGAAATTGTACCTTTTAAACCCACAGTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
||
| CDS-3UTR CAA 90 bp | AACAATGGCTTCTCTTCAGGTGGTTCTGTATTGGAAATCCTGGGAACTGGTAAACTTCTGCAGACTCATTaGATTCTTCTCCACGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: NNGFSSGGSVLEILGTGKLLQTH*ILLHGP Trigger: GGGACCGTGGAGAAGAATCAAATGAGTCTGCAGAAG...TTTACCAGTTCCCAGGATTTCCAATACAGAACCACCTGAAGAGAAGCCATTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
||
| CDS-3UTR CAA 90 bp | AACAATGGCTTCTCTTCAGGTGGTTCTGTATTGGAAATCCTGGGAACTGGTAAATTGCTTACGCTCTTCTaGAGAACCATAGTAACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: NNGFSSGGSVLEILGTGKLLTLF*RTIVTE Trigger: CTCTGTTACTATGGTTCTCAAGAAGAGCGTAAGCAA...TTTACCAGTTCCCAGGATTTCCAATACAGAACCACCTGAAGAGAAGCCATTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
||
| CDS-3UTR CAA 90 bp | CTGCTGATCTTGGTGATTCAGCAGAAGGAAATGTGTAAGAGAAAACTGGAGCAGGGCCATTTTTCTCAATaGCATCATGACATTGCACAT | + |
|
Preference number: 5 (lower is better) Translates to: LLILVIQQKEMCKRKLEQGHFSQ*HHDIAH Trigger: ATGTGCAATGTCATGATGCAATTGAGAAAAATGGCC...CTGCTCCAGTTTTCTCTTACACATTTCCTTCTGCTGAATCACCAAGATCAGCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
||
| CDS-3UTR CAA 90 bp | AACAATGGCTTCTCTTCAGGTGGTTCTGTATTGGAAATCCTGGGAACTGGTAAAGCACCTGTCTTCTGCTaGTTTGTCATTGTATGGATT | + |
|
Preference number: 5 (lower is better) Translates to: NNGFSSGGSVLEILGTGKAPVFC*FVIVWI Trigger: AATCCATACAATGACAAACAAGCAGAAGACAGGTGC...TTTACCAGTTCCCAGGATTTCCAATACAGAACCACCTGAAGAGAAGCCATTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
||
| CDS-3UTR CAA 90 bp | AAACCCCATGGTCACCGTGATGTGAATGTCCTTGAATGCACCAAGTTGATATGTGATGTTGAATCTAATTaGCTTACGCTCTTCTTGAGA | + |
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Preference number: 5 (lower is better) Translates to: KPHGHRDVNVLECTKLICDVESN*LTLFLR Trigger: TCTCAAGAAGAGCGTAAGCAAATTAGATTCAACATC...ACATATCAACTTGGTGCATTCAAGGACATTCACATCACGGTGACCATGGGGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
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| CDS-3UTR CAA 90 bp | AGTCTGACCAACTCTATGGCACCTGTCTTCTGCTTGTTTGTCATTGTATGGATTCTGTACTGGAACAATTaGGAGAAACATCTTCAGTAT | + |
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Preference number: 5 (lower is better) Translates to: SLTNSMAPVFCLFVIVWILYWNN*EKHLQY Trigger: ATACTGAAGATGTTTCTCCAAATTGTTCCAGTACAG...AATCCATACAATGACAAACAAGCAGAAGACAGGTGCCATAGAGTTGGTCAGACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204620.3 |
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| CDS-3UTR CAA 90 bp | TGTGAGGATCTGGAGAATCCAGTTAGTGGCAAAAAGTTGTCCATACTATGTGAAATCACTGTCACTTCTTaGTGGAAACAGTTCCTTCAA | + |
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Preference number: 5 (lower is better) Translates to: CEDLENPVSGKKLSILCEITVTS*WKQFLQ Trigger: TTGAAGGAACTGTTTCCACAAAGAAGTGACAGTGAT...TTCACATAGTATGGACAACTTTTTGCCACTAACTGGATTCTCCAGATCCTCACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
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| CDS TCA 90 bp | AGAAGATCACTGTCACTTCTTTGTGGAAACAGTTCCTTCAATGTCTaGAGCTTAGCATCTTTAAGATCTTCCAATTCTGAAAGGTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: RRSLSLLCGNSSFNV*SLASLRSSNSERSS Trigger: GGAAGACCTTTCAGAATTGGAAGATCTTAAAGATGCTAAGCTTCAGACATTGAAGGAACTGTTTCCACAAAGAAGTGACAGTGATCTTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
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| CDS-3UTR CAA 90 bp | CAACATCTGCTGATCTTGGTGATTCAGCAGAAGGAAATGTGTAAGAGAAAACTGTCTGCTTGTTTGTCATaGTATGGATTGCAATCAATG | + |
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Preference number: 5 (lower is better) Translates to: QHLLILVIQQKEMCKRKLSACLS*YGLQSM Trigger: CATTGATTGCAATCCATACAATGACAAACAAGCAGA...CAGTTTTCTCTTACACATTTCCTTCTGCTGAATCACCAAGATCAGCAGATGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
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| CDS-3UTR CAA 90 bp | GTGGGAGACACATTTCACACAGAAAAGTTAAGGGAAATTCACTGTGGGTTTAAACTGTACTGGAACAATTaGGAGAAACATCTTCAGTAT | + |
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Preference number: 5 (lower is better) Translates to: VGDTFHTEKLREIHCGFKLYWNN*EKHLQY Trigger: ATACTGAAGATGTTTCTCCAAATTGTTCCAGTACAG...TTTAAACCCACAGTGAATTTCCCTTAACTTTTCTGTGTGAAATGTGTCTCCCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
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| CDS-3UTR CAA 90 bp | GTGGGAGACACATTTCACACAGAAAAGTTAAGGGAAATTCACTGTGGGTTTAAAAACTACGTCCCTTTCTaGAATTACCGTTTTGCAATT | + |
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Preference number: 5 (lower is better) Translates to: VGDTFHTEKLREIHCGFKNYVPF*NYRFAI Trigger: AATTGCAAAACGGTAATTCAAGAAAGGGACGTAGTT...TTTAAACCCACAGTGAATTTCCCTTAACTTTTCTGTGTGAAATGTGTCTCCCAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
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| CDS-3UTR CAA 90 bp | GTGGGAGACACATTTCACACAGAAAAGTTAAGGGAAATTCACTGTGGGTTTAAAGGCCTTCATCAAAAATaGCATAATTCAGTTTCAGTC | + |
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Preference number: 5 (lower is better) Translates to: VGDTFHTEKLREIHCGFKGLHQK*HNSVSV Trigger: GACTGAAACTGAATTATGCAATTTTTGATGAAGGCC...TTTAAACCCACAGTGAATTTCCCTTAACTTTTCTGTGTGAAATGTGTCTCCCAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
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| CDS TCA 72 bp | TTCAGCATTCTCCTCTTCAGCACTAAGAGAAATTGGTaGCGAAGGACGGGCCTGGGAGGGCTGAGGGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: FSILLFSTKRNW*RRTGLGGLRGC Trigger: GCAGCCCCTCAGCCCTCCCAGGCCCGTCCTTCGTCACCAATTTCTCTTAGTGCTGAAGAGGAGAATGCTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000031984.9 ENSMUST00000204114.3 ENSMUST00000204620.3 ENSMUST00000204696.3 ENSMUST00000204801.3 ENSMUST00000204955.2 ENSMUST00000205118.3 |
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| CDS TCA 72 bp | CTGTCACTTCTTTGTGGAAACAGTTCCTTCAATGTCTaGAGCTTAGCATCTTTAAGATCTTCCAATTCTGAA | + |
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Preference number: 6 (lower is better) Translates to: LSLLCGNSSFNV*SLASLRSSNSE Trigger: TTCAGAATTGGAAGATCTTAAAGATGCTAAGCTTCAGACATTGAAGGAACTGTTTCCACAAAGAAGTGACAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031984.9 |
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