Pregenerated sensors for SMARCA1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031099Ensembl transcript IDs: ENSMUST00000077569.11, ENSMUST00000088973.11, ENSMUST00000101616.9, ENSMUST00000141084.3, ENSMUST00000153548.9, ENSMUST00000153587.2
Found 139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGTTCTTTTGTATACACAGTTCCACAAAGATCAAACAACTTATTTaGTCAACTCAGGTTTCAGTCTTCACACCATCCCATCACTACTCT | + |
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Preference number: 1 (lower is better) Translates to: GFFCIHSSTKIKQLI*STQVSVFTPSHHYS Trigger: AGAGTAGTGATGGGATGGTGTGAAGACTGAAACCTGAGTTGATCAAATAAGTTGTTTGATCTTTGTGGAACTGTGTATACAAAAGAACCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
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| 3UTR CAA 90 bp | AGGGTTCTTTTGTATACACAGTTCCACAAAGATCAAACAACTTATTaGATCAACTCAGGTTTCAGTCTTCACACCATCCCATCACTACTC | + |
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Preference number: 2 (lower is better) Translates to: RVLLYTQFHKDQTTY*INSGFSLHTIPSLL Trigger: GAGTAGTGATGGGATGGTGTGAAGACTGAAACCTGAGTTGATCAAATAAGTTGTTTGATCTTTGTGGAACTGTGTATACAAAAGAACCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
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| 3UTR-3UTR TCA 90 bp | ACTTATTGCCAAAACAGGCTATCTTGTCTGCTCAGGGTTCTTTTGTATACACAGAGAGAAGTACGTTTGTaGTGTGATTCTTCTTTGATC | + |
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Preference number: 2 (lower is better) Translates to: TYCQNRLSCLLRVLLYTQREVRL*CDSSLI Trigger: GATCAAAGAAGAATCACATCACAAACGTACTTCTCT...CTGTGTATACAAAAGAACCCTGAGCAGACAAGATAGCCTGTTTTGGCAATAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
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| 3UTR-3UTR GCA 90 bp | AAAATGGAAACAGATTTAATGTTCTGCTCCAATATGCACACTTTTAAATGGCCCACAGGCTATCTTGTCTaGTCAGGGTTCTTTTGTATA | + |
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Preference number: 2 (lower is better) Translates to: KMETDLMFCSNMHTFKWPTGYLV*SGFFCI Trigger: TATACAAAAGAACCCTGAGCAGACAAGATAGCCTGT...GGGCCATTTAAAAGTGTGCATATTGGAGCAGAACATTAAATCTGTTTCCATTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
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| 3UTR TCA 72 bp | GCCAGCAAGATGGCTCTCAGGGTCAGCATAATAACATaGGTTCGATTCCCCAAAACCCACATAAAGATGCTA | + |
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Preference number: 3 (lower is better) Translates to: ASKMALRVSIIT*VRFPKTHIKML Trigger: TAGCATCTTTATGTGGGTTTTGGGGAATCGAACTCATGTTATTATGCTGACCCTGAGAGCCATCTTGCTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141084.3 |
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| 3UTR-3UTR CAA 90 bp | TATACACAGCAACCCAACAGGATTAAAATCACATTTTTATCCAGCAGTGAACTTCTGCTCAGGGTTCTTTaGTATACACAGTTCCACAAA | + |
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Preference number: 3 (lower is better) Translates to: YTQQPNRIKITFLSSSELLLRVL*YTQFHK Trigger: TTTGTGGAACTGTGTATACAAAAGAACCCTGAGCAG...AAGTTCACTGCTGGATAAAAATGTGATTTTAATCCTGTTGGGTTGCTGTGTATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
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| 3UTR TCA 72 bp | AAATTTAATGAAAAGGTTGGATACACCACTATGAACTaGGTCTCTCTTATCAGTGTGGTAACAATGTGCTAT | + |
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Preference number: 3 (lower is better) Translates to: KFNEKVGYTTMN*VSLISVVTMCY Trigger: ATAGCACATTGTTACCACACTGATAAGAGAGACTCAGTTCATAGTGGTGTATCCAACCTTTTCATTAAATTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141084.3 |
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| CDS-3UTR GCA 90 bp | GGCTTTAGGCTGGGATGGGAGATCAATAGTAAAGCATTAGCTAAGCACCCTGGCAACTGCCACGGTGGCTaGCTCTGTGGCCGTGTCCGG | + |
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Preference number: 4 (lower is better) Translates to: GFRLGWEINSKALAKHPGNCHGG*LCGRVR Trigger: CCGGACACGGCCACAGAGGCAGCCACCGTGGCAGTT...GCCAGGGTGCTTAGCTAATGCTTTACTATTGATCTCCCATCCCAGCCTAAAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141084.3 |
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| CDS-3UTR CCA 90 bp | GGCTTTAGGCTGGGATGGGAGATCAATAGTAAAGCATTAGCTAAGCACCCTGGCCCGAAACTGCCACGGTaGCTGCCTCTGTGGCCGTGT | + |
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Preference number: 4 (lower is better) Translates to: GFRLGWEINSKALAKHPGPKLPR*LPLWPC Trigger: ACACGGCCACAGAGGCAGCCACCGTGGCAGTTTCGG...GCCAGGGTGCTTAGCTAATGCTTTACTATTGATCTCCCATCCCAGCCTAAAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141084.3 |
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| CDS-3UTR GCA 90 bp | ACTTATTGCCAAAACAGGCTATCTTGTCTGCTCAGGGTTCTTTTGTATACACAGAACTGCCACGGTGGCTaGCTCTGTGGCCGTGTCCGG | + |
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Preference number: 4 (lower is better) Translates to: TYCQNRLSCLLRVLLYTQNCHGG*LCGRVR Trigger: CCGGACACGGCCACAGAGGCAGCCACCGTGGCAGTT...CTGTGTATACAAAAGAACCCTGAGCAGACAAGATAGCCTGTTTTGGCAATAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
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| CDS-3UTR GCA 90 bp | ACTTATTGCCAAAACAGGCTATCTTGTCTGCTCAGGGTTCTTTTGTATACACAGTCTCAGTGGCCGTGGTaGCTTCGGTGGCGGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: TYCQNRLSCLLRVLLYTQSQWPW*LRWRQQ Trigger: CTGCTGCCGCCACCGAAGGCACCACGGCCACTGAGA...CTGTGTATACAAAAGAACCCTGAGCAGACAAGATAGCCTGTTTTGGCAATAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
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| CDS-3UTR GCA 90 bp | AACAACTTATTTGATCAACTCAGGTTTCAGTCTTCACACCATCCCATCACTACTGTGGACGGCCCGGGCTaGTCATCCTCTACAACCACG | + |
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Preference number: 4 (lower is better) Translates to: NNLFDQLRFQSSHHPITTVDGPG*SSSTTT Trigger: CGTGGTTGTAGAGGATGAGCAGCCCGGGCCGTCCAC...AGTAGTGATGGGATGGTGTGAAGACTGAAACCTGAGTTGATCAAATAAGTTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
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| CDS-3UTR CCA 90 bp | AACAACTTATTTGATCAACTCAGGTTTCAGTCTTCACACCATCCCATCACTACTCCGAAACTGCCACGGTaGCTGCCTCTGTGGCCGTGT | + |
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Preference number: 4 (lower is better) Translates to: NNLFDQLRFQSSHHPITTPKLPR*LPLWPC Trigger: ACACGGCCACAGAGGCAGCCACCGTGGCAGTTTCGG...AGTAGTGATGGGATGGTGTGAAGACTGAAACCTGAGTTGATCAAATAAGTTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
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| CDS-3UTR GCA 90 bp | GAATATATATTAAGATGGATGGCTTTAGGCTGGGATGGGAGATCAATAGTAAAGGTGGACGGCCCGGGCTaGTCATCCTCTACAACCACG | + |
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Preference number: 4 (lower is better) Translates to: EYILRWMALGWDGRSIVKVDGPG*SSSTTT Trigger: CGTGGTTGTAGAGGATGAGCAGCCCGGGCCGTCCAC...CTTTACTATTGATCTCCCATCCCAGCCTAAAGCCATCCATCTTAATATATATTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141084.3 |
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| CDS-3UTR CCA 90 bp | GAAAGCATCATAGATTTGATGAAATATGGTGCACTACTTAACACACTCAAACAGTCTCGCCCTTCTCAGTaGCCGTGGTGCCTTCGGTGG | + |
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Preference number: 4 (lower is better) Translates to: ESIIDLMKYGALLNTLKQSRPSQ*PWCLRW Trigger: CCACCGAAGGCACCACGGCCACTGAGAAGGGCGAGA...CTGTTTGAGTGTGTTAAGTAGTGCACCATATTTCATCAAATCTATGATGCTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
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| CDS-3UTR GCA 90 bp | GGCTTTAGGCTGGGATGGGAGATCAATAGTAAAGCATTAGCTAAGCACCCTGGCATCACGAATAAAAGCTaGTCTCACATCTTTGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: GFRLGWEINSKALAKHPGITNKS*SHIFVS Trigger: GGAGACAAAGATGTGAGAGCAGCTTTTATTCGTGAT...GCCAGGGTGCTTAGCTAATGCTTTACTATTGATCTCCCATCCCAGCCTAAAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141084.3 |
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| CDS-3UTR GCA 90 bp | GGCTTTAGGCTGGGATGGGAGATCAATAGTAAAGCATTAGCTAAGCACCCTGGCACGGAAATCAAGCTCTaGTTGTCATCTTTCTTTACT | + |
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Preference number: 4 (lower is better) Translates to: GFRLGWEINSKALAKHPGTEIKL*LSSFFT Trigger: AGTAAAGAAAGATGACAAGCAGAGCTTGATTTCCGT...GCCAGGGTGCTTAGCTAATGCTTTACTATTGATCTCCCATCCCAGCCTAAAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141084.3 |
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| CDS-3UTR CCA 90 bp | AACAACTTATTTGATCAACTCAGGTTTCAGTCTTCACACCATCCCATCACTACTCTACAACCACGACTGTaGCTCTGGCATCCGAAACTG | + |
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Preference number: 4 (lower is better) Translates to: NNLFDQLRFQSSHHPITTLQPRL*LWHPKL Trigger: CAGTTTCGGATGCCAGAGCCACAGTCGTGGTTGTAG...AGTAGTGATGGGATGGTGTGAAGACTGAAACCTGAGTTGATCAAATAAGTTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
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| CDS-3UTR CCA 90 bp | GGCTTTAGGCTGGGATGGGAGATCAATAGTAAAGCATTAGCTAAGCACCCTGGCAATAACACGGAGAGATaGAACCCATCGTTTAAATTC | + |
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Preference number: 4 (lower is better) Translates to: GFRLGWEINSKALAKHPGNNTER*NPSFKF Trigger: GAATTTAAACGATGGGTTCCATCTCTCCGTGTTATT...GCCAGGGTGCTTAGCTAATGCTTTACTATTGATCTCCCATCCCAGCCTAAAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141084.3 |
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| CDS-3UTR CCA 90 bp | ACTTATTGCCAAAACAGGCTATCTTGTCTGCTCAGGGTTCTTTTGTATACACAGACGGAAGACTCGTACTaGCTTCTTCTGACCAATGCG | + |
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Preference number: 4 (lower is better) Translates to: TYCQNRLSCLLRVLLYTQTEDSY*LLLTNA Trigger: CGCATTGGTCAGAAGAAGCCAGTACGAGTCTTCCGT...CTGTGTATACAAAAGAACCCTGAGCAGACAAGATAGCCTGTTTTGGCAATAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
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| CDS-3UTR CCA 90 bp | TATACACAGCAACCCAACAGGATTAAAATCACATTTTTATCCAGCAGTGAACTTAGGCCGAGGAGCCTTTaGGATCTTTGGCTCGCTGAC | + |
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Preference number: 4 (lower is better) Translates to: YTQQPNRIKITFLSSSELRPRSL*DLWLAD Trigger: GTCAGCGAGCCAAAGATCCCAAAGGCTCCTCGGCCT...AAGTTCACTGCTGGATAAAAATGTGATTTTAATCCTGTTGGGTTGCTGTGTATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
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| CDS-3UTR CCA 90 bp | GAATATATATTAAGATGGATGGCTTTAGGCTGGGATGGGAGATCAATAGTAAAGCTACAACCACGACTGTaGCTCTGGCATCCGAAACTG | + |
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Preference number: 4 (lower is better) Translates to: EYILRWMALGWDGRSIVKLQPRL*LWHPKL Trigger: CAGTTTCGGATGCCAGAGCCACAGTCGTGGTTGTAG...CTTTACTATTGATCTCCCATCCCAGCCTAAAGCCATCCATCTTAATATATATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141084.3 |
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| CDS-3UTR CCA 90 bp | ACTTATTGCCAAAACAGGCTATCTTGTCTGCTCAGGGTTCTTTTGTATACACAGCTCTCTTTCTTCATGTaGGGTTTGTCCATCCAGTCG | + |
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Preference number: 4 (lower is better) Translates to: TYCQNRLSCLLRVLLYTQLSFFM*GLSIQS Trigger: CGACTGGATGGACAAACCCCACATGAAGAAAGAGAG...CTGTGTATACAAAAGAACCCTGAGCAGACAAGATAGCCTGTTTTGGCAATAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
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| CDS-3UTR TCA 90 bp | ACTTATTGCCAAAACAGGCTATCTTGTCTGCTCAGGGTTCTTTTGTATACACAGTTCCCAAAATACAGCTaGATACTCCATGACCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: TYCQNRLSCLLRVLLYTQFPKYS*ILHDLL Trigger: GAGGAGGTCATGGAGTATTCAGCTGTATTTTGGGAA...CTGTGTATACAAAAGAACCCTGAGCAGACAAGATAGCCTGTTTTGGCAATAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
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| CDS-3UTR GCA 90 bp | ACTTATTGCCAAAACAGGCTATCTTGTCTGCTCAGGGTTCTTTTGTATACACAGCTCCCATTTTCTGCATaGGTTCATTCATCTCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: TYCQNRLSCLLRVLLYTQLPFSA*VHSSLQ Trigger: CTGCAGAGATGAATGAACGCATGCAGAAAATGGGAG...CTGTGTATACAAAAGAACCCTGAGCAGACAAGATAGCCTGTTTTGGCAATAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
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| CDS-3UTR GCA 90 bp | AACAACTTATTTGATCAACTCAGGTTTCAGTCTTCACACCATCCCATCACTACTAAAGTAGGCATCCACTaGATAGTTGGCTTTGCGTTC | + |
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Preference number: 4 (lower is better) Translates to: NNLFDQLRFQSSHHPITTKVGIH*IVGFAF Trigger: GAACGCAAAGCCAACTATGCAGTGGATGCCTACTTT...AGTAGTGATGGGATGGTGTGAAGACTGAAACCTGAGTTGATCAAATAAGTTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
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| CDS-3UTR CCA 90 bp | AAAATGGAAACAGATTTAATGTTCTGCTCCAATATGCACACTTTTAAATGGCCCATCTGTCGTATAAGGTaGACCAGGCTCTGCTCCATC | + |
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Preference number: 4 (lower is better) Translates to: KMETDLMFCSNMHTFKWPICRIR*TRLCSI Trigger: GATGGAGCAGAGCCTGGTCCACCTTATACGACAGAT...GGGCCATTTAAAAGTGTGCATATTGGAGCAGAACATTAAATCTGTTTCCATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
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| CDS-3UTR CCA 90 bp | GAAAGCATCATAGATTTGATGAAATATGGTGCACTACTTAACACACTCAAACAGAACATTTGGCTGTTTTaGAGGCCGAGGAGCCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: ESIIDLMKYGALLNTLKQNIWLF*RPRSLW Trigger: CCAAAGGCTCCTCGGCCTCCAAAACAGCCAAATGTT...CTGTTTGAGTGTGTTAAGTAGTGCACCATATTTCATCAAATCTATGATGCTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
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| CDS-3UTR CCA 90 bp | TATACACAGCAACCCAACAGGATTAAAATCACATTTTTATCCAGCAGTGAACTTCTCTTCAGTCTCTTGTaGTGTAAGAGGTTCCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: YTQQPNRIKITFLSSSELLFSLL*CKRFRS Trigger: GGAGCGGAACCTCTTACACCACAAGAGACTGAAGAG...AAGTTCACTGCTGGATAAAAATGTGATTTTAATCCTGTTGGGTTGCTGTGTATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
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| CDS-3UTR CCA 90 bp | AACAACTTATTTGATCAACTCAGGTTTCAGTCTTCACACCATCCCATCACTACTCAGTCAAATCTAAACTaGGGAGCATTCCGTACACAC | + |
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Preference number: 4 (lower is better) Translates to: NNLFDQLRFQSSHHPITTQSNLN*GAFRTH Trigger: GTGTGTACGGAATGCTCCCCAGTTTAGATTTGACTG...AGTAGTGATGGGATGGTGTGAAGACTGAAACCTGAGTTGATCAAATAAGTTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
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| CDS-3UTR TCA 90 bp | GAATATATATTAAGATGGATGGCTTTAGGCTGGGATGGGAGATCAATAGTAAAGGTGCTGAAGGCTGAATaGAATGTGCAAAAAGTTCCG | + |
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Preference number: 4 (lower is better) Translates to: EYILRWMALGWDGRSIVKVLKAE*NVQKVP Trigger: CGGAACTTTTTGCACATTTCATTCAGCCTTCAGCAC...CTTTACTATTGATCTCCCATCCCAGCCTAAAGCCATCCATCTTAATATATATTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141084.3 |
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| CDS-3UTR TCA 90 bp | GAAAGCATCATAGATTTGATGAAATATGGTGCACTACTTAACACACTCAAACAGTGTTTTCCTACTCTCTaGGAGAAGCTCCTCATCCTC | + |
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Preference number: 4 (lower is better) Translates to: ESIIDLMKYGALLNTLKQCFPTL*EKLLIL Trigger: GAGGATGAGGAGCTTCTCTCAGAGAGTAGGAAAACA...CTGTTTGAGTGTGTTAAGTAGTGCACCATATTTCATCAAATCTATGATGCTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
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| CDS-3UTR TCA 90 bp | TATACACAGCAACCCAACAGGATTAAAATCACATTTTTATCCAGCAGTGAACTTTTTTGCTCTTCTCTTTaGGCTATAGCTGGGTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: YTQQPNRIKITFLSSSELFCSSL*AIAGLG Trigger: CCCCAACCCAGCTATAGCTCAAAGAGAAGAGCAAAA...AAGTTCACTGCTGGATAAAAATGTGATTTTAATCCTGTTGGGTTGCTGTGTATA 40% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
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| CDS-3UTR GCA 90 bp | ATTAAGATGGATGGCTTTAGGCTGGGATGGGAGATCAATAGTAAAGCATTAGCTTCATGCAAGTTATTCTaGAAAGGTGTCCCAGTTAGA | + |
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Preference number: 4 (lower is better) Translates to: IKMDGFRLGWEINSKALASCKLF*KGVPVR Trigger: TCTAACTGGGACACCTTTGCAGAATAACTTGCATGA...AGCTAATGCTTTACTATTGATCTCCCATCCCAGCCTAAAGCCATCCATCTTAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141084.3 |
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| CDS-3UTR GCA 90 bp | AACAACTTATTTGATCAACTCAGGTTTCAGTCTTCACACCATCCCATCACTACTAATGCCCAGAGCTCATaGAAGTTATTCTGCAAAGGT | + |
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Preference number: 4 (lower is better) Translates to: NNLFDQLRFQSSHHPITTNAQSS*KLFCKG Trigger: ACCTTTGCAGAATAACTTGCATGAGCTCTGGGCATT...AGTAGTGATGGGATGGTGTGAAGACTGAAACCTGAGTTGATCAAATAAGTTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
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| CDS-3UTR GCA 90 bp | AAAATGGAAACAGATTTAATGTTCTGCTCCAATATGCACACTTTTAAATGGCCCGACCACATCAGCACTTaGCAAGTTAATTCCGAGTCC | + |
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Preference number: 4 (lower is better) Translates to: KMETDLMFCSNMHTFKWPDHIST*QVNSES Trigger: GGACTCGGAATTAACTTGGCAAGTGCTGATGTGGTC...GGGCCATTTAAAAGTGTGCATATTGGAGCAGAACATTAAATCTGTTTCCATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
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| CDS-3UTR CCA 90 bp | ACTTATTGCCAAAACAGGCTATCTTGTCTGCTCAGGGTTCTTTTGTATACACAGAACCAAGCAAGGCAATaGTTTGTAAAGTCTTCCCAA | + |
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Preference number: 4 (lower is better) Translates to: TYCQNRLSCLLRVLLYTQNQARQ*FVKSSQ Trigger: TTGGGAAGACTTTACAAACCATTGCCTTGCTTGGTT...CTGTGTATACAAAAGAACCCTGAGCAGACAAGATAGCCTGTTTTGGCAATAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
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| CDS-3UTR CCA 90 bp | ATTAAGATGGATGGCTTTAGGCTGGGATGGGAGATCAATAGTAAAGCATTAGCTAACCAAGCAAGGCAATaGTTTGTAAAGTCTTCCCAA | + |
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Preference number: 4 (lower is better) Translates to: IKMDGFRLGWEINSKALANQARQ*FVKSSQ Trigger: TTGGGAAGACTTTACAAACCATTGCCTTGCTTGGTT...AGCTAATGCTTTACTATTGATCTCCCATCCCAGCCTAAAGCCATCCATCTTAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141084.3 |
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| CDS-3UTR TCA 90 bp | AACAACTTATTTGATCAACTCAGGTTTCAGTCTTCACACCATCCCATCACTACTGCAGCAAGTTTGAGTTaGAATGGAGAAGTGATTTTC | + |
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Preference number: 4 (lower is better) Translates to: NNLFDQLRFQSSHHPITTAASLS*NGEVIF Trigger: GAAAATCACTTCTCCATTTCAACTCAAACTTGCTGC...AGTAGTGATGGGATGGTGTGAAGACTGAAACCTGAGTTGATCAAATAAGTTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
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| CDS-3UTR TCA 90 bp | GAAAGCATCATAGATTTGATGAAATATGGTGCACTACTTAACACACTCAAACAGGTGCTGAAGGCTGAATaGAATGTGCAAAAAGTTCCG | + |
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Preference number: 4 (lower is better) Translates to: ESIIDLMKYGALLNTLKQVLKAE*NVQKVP Trigger: CGGAACTTTTTGCACATTTCATTCAGCCTTCAGCAC...CTGTTTGAGTGTGTTAAGTAGTGCACCATATTTCATCAAATCTATGATGCTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
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| CDS-3UTR TCA 90 bp | AAAATGGAAACAGATTTAATGTTCTGCTCCAATATGCACACTTTTAAATGGCCCCTGAATCATATAGGATaGCCACATCAGCACTTGCCA | + |
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Preference number: 4 (lower is better) Translates to: KMETDLMFCSNMHTFKWPLNHIG*PHQHLP Trigger: TGGCAAGTGCTGATGTGGTCATCCTATATGATTCAG...GGGCCATTTAAAAGTGTGCATATTGGAGCAGAACATTAAATCTGTTTCCATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
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| CDS-3UTR TCA 90 bp | TATACACAGCAACCCAACAGGATTAAAATCACATTTTTATCCAGCAGTGAACTTATACTGATCCTTCGCTaGATTCTTGCTTCTCCACGT | + |
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Preference number: 4 (lower is better) Translates to: YTQQPNRIKITFLSSSELILILR*ILASPR Trigger: ACGTGGAGAAGCAAGAATTCAGCGAAGGATCAGTAT...AAGTTCACTGCTGGATAAAAATGTGATTTTAATCCTGTTGGGTTGCTGTGTATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
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| CDS-3UTR TCA 90 bp | GAAAGCATCATAGATTTGATGAAATATGGTGCACTACTTAACACACTCAAACAGGTATTACAGCGTCTCTaGAATTCCATGGCAGTTCTC | + |
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Preference number: 4 (lower is better) Translates to: ESIIDLMKYGALLNTLKQVLQRL*NSMAVL Trigger: GAGAACTGCCATGGAATTTCAGAGACGCTGTAATAC...CTGTTTGAGTGTGTTAAGTAGTGCACCATATTTCATCAAATCTATGATGCTTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
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| CDS-3UTR GCA 90 bp | TATACACAGCAACCCAACAGGATTAAAATCACATTTTTATCCAGCAGTGAACTTTCTCTTTGCGCGGTCTaGTTTCAAGGGCATATTTAC | + |
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Preference number: 4 (lower is better) Translates to: YTQQPNRIKITFLSSSELSLCAV*FQGHIY Trigger: GTAAATATGCCCTTGAAAGCAGACCGCGCAAAGAGA...AAGTTCACTGCTGGATAAAAATGTGATTTTAATCCTGTTGGGTTGCTGTGTATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
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| CDS-3UTR GCA 90 bp | AACAACTTATTTGATCAACTCAGGTTTCAGTCTTCACACCATCCCATCACTACTTCATGCAAGTTATTCTaGAAAGGTGTCCCAGTTAGA | + |
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Preference number: 4 (lower is better) Translates to: NNLFDQLRFQSSHHPITTSCKLF*KGVPVR Trigger: TCTAACTGGGACACCTTTGCAGAATAACTTGCATGA...AGTAGTGATGGGATGGTGTGAAGACTGAAACCTGAGTTGATCAAATAAGTTGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
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| CDS-3UTR GCA 90 bp | GAATATATATTAAGATGGATGGCTTTAGGCTGGGATGGGAGATCAATAGTAAAGAATGCCCAGAGCTCATaGAAGTTATTCTGCAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: EYILRWMALGWDGRSIVKNAQSS*KLFCKG Trigger: ACCTTTGCAGAATAACTTGCATGAGCTCTGGGCATT...CTTTACTATTGATCTCCCATCCCAGCCTAAAGCCATCCATCTTAATATATATTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141084.3 |
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| CDS-3UTR GCA 90 bp | GAAAGCATCATAGATTTGATGAAATATGGTGCACTACTTAACACACTCAAACAGTGGAGCCTTGTATCTTaGAATTTTGGCATCCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ESIIDLMKYGALLNTLKQWSLVS*NFGIQC Trigger: GCACTGGATGCCAAAATTGCAAGATACAAGGCTCCA...CTGTTTGAGTGTGTTAAGTAGTGCACCATATTTCATCAAATCTATGATGCTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
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| CDS-3UTR CCA 90 bp | AACAACTTATTTGATCAACTCAGGTTTCAGTCTTCACACCATCCCATCACTACTACGCAACTGATGAAATaGAGCCTTGTATCTTGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: NNLFDQLRFQSSHHPITTTQLMK*SLVSCN Trigger: ATTGCAAGATACAAGGCTCCATTTCATCAGTTGCGT...AGTAGTGATGGGATGGTGTGAAGACTGAAACCTGAGTTGATCAAATAAGTTGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
||
| CDS-3UTR TCA 90 bp | GAATATATATTAAGATGGATGGCTTTAGGCTGGGATGGGAGATCAATAGTAAAGGCAGCAAGTTTGAGTTaGAATGGAGAAGTGATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: EYILRWMALGWDGRSIVKAASLS*NGEVIF Trigger: GAAAATCACTTCTCCATTTCAACTCAAACTTGCTGC...CTTTACTATTGATCTCCCATCCCAGCCTAAAGCCATCCATCTTAATATATATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141084.3 |
||
| CDS-3UTR GCA 90 bp | ATTAAGATGGATGGCTTTAGGCTGGGATGGGAGATCAATAGTAAAGCATTAGCTGCAAAAAGTTCCGTCTaGTTCAGTAAAAACTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: IKMDGFRLGWEINSKALAAKSSV*FSKNSN Trigger: ATTTGAGTTTTTACTGAAGCAGACGGAACTTTTTGC...AGCTAATGCTTTACTATTGATCTCCCATCCCAGCCTAAAGCCATCCATCTTAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000141084.3 |
||
| CDS-3UTR GCA 90 bp | GAAAGCATCATAGATTTGATGAAATATGGTGCACTACTTAACACACTCAAACAGGTATACCATTCTCGTTaGATTTTACTCAGGCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: ESIIDLMKYGALLNTLKQVYHSR*ILLRPK Trigger: CTTGGGCCTGAGTAAAATGCAACGAGAATGGTATAC...CTGTTTGAGTGTGTTAAGTAGTGCACCATATTTCATCAAATCTATGATGCTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
||
| CDS-3UTR GCA 90 bp | AAAATGGAAACAGATTTAATGTTCTGCTCCAATATGCACACTTTTAAATGGCCCCCATTTTACCACTATTaGCGACAATGTGCTCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: KMETDLMFCSNMHTFKWPPFYHY*RQCAHL Trigger: CAGATGAGCACATTGTCGGCAATAGTGGTAAAATGG...GGGCCATTTAAAAGTGTGCATATTGGAGCAGAACATTAAATCTGTTTCCATTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
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| CDS-3UTR GCA 90 bp | GAAAGCATCATAGATTTGATGAAATATGGTGCACTACTTAACACACTCAAACAGGACTCTCCCATTTTCTaGATGCGTTCATTCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ESIIDLMKYGALLNTLKQDSPIF*MRSFIS Trigger: AGAGATGAATGAACGCATGCAGAAAATGGGAGAGTC...CTGTTTGAGTGTGTTAAGTAGTGCACCATATTTCATCAAATCTATGATGCTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
||
| CDS-3UTR GCA 90 bp | TATACACAGCAACCCAACAGGATTAAAATCACATTTTTATCCAGCAGTGAACTTCCTTCGCTGAATTCTTaGTTCTCCACGTTCAATTTG | + |
|
Preference number: 4 (lower is better) Translates to: YTQQPNRIKITFLSSSELPSLNS*FSTFNL Trigger: CAAATTGAACGTGGAGAAGCAAGAATTCAGCGAAGG...AAGTTCACTGCTGGATAAAAATGTGATTTTAATCCTGTTGGGTTGCTGTGTATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
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| CDS-3UTR GCA 90 bp | ACTTATTGCCAAAACAGGCTATCTTGTCTGCTCAGGGTTCTTTTGTATACACAGAATTTTGGCATCCAGTaGTTTCTTAATACTGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: TYCQNRLSCLLRVLLYTQNFGIQ*FLNTDP Trigger: AGGATCAGTATTAAGAAAGCACTGGATGCCAAAATT...CTGTGTATACAAAAGAACCCTGAGCAGACAAGATAGCCTGTTTTGGCAATAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
||
| CDS-3UTR CCA 90 bp | AACAACTTATTTGATCAACTCAGGTTTCAGTCTTCACACCATCCCATCACTACTGGTTTTAAAACTGCATaGAGTCTTTCCACAAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NNLFDQLRFQSSHHPITTGFKTA*SLSTSF Trigger: AAAGCTTGTGGAAAGACTCCATGCAGTTTTAAAACC...AGTAGTGATGGGATGGTGTGAAGACTGAAACCTGAGTTGATCAAATAAGTTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
||
| CDS-3UTR GCA 90 bp | TATACACAGCAACCCAACAGGATTAAAATCACATTTTTATCCAGCAGTGAACTTATCACGAATAAAAGCTaGTCTCACATCTTTGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: YTQQPNRIKITFLSSSELITNKS*SHIFVS Trigger: GGAGACAAAGATGTGAGAGCAGCTTTTATTCGTGAT...AAGTTCACTGCTGGATAAAAATGTGATTTTAATCCTGTTGGGTTGCTGTGTATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
||
| CDS-3UTR GCA 90 bp | GAAAGCATCATAGATTTGATGAAATATGGTGCACTACTTAACACACTCAAACAGCAACACTTTCGGAGCTaGATCAGAATATTCAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: ESIIDLMKYGALLNTLKQQHFRS*IRIFKS Trigger: ACTCTTGAATATTCTGATGCAGCTCCGAAAGTGTTG...CTGTTTGAGTGTGTTAAGTAGTGCACCATATTTCATCAAATCTATGATGCTTTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
||
| CDS-3UTR GCA 90 bp | TATACACAGCAACCCAACAGGATTAAAATCACATTTTTATCCAGCAGTGAACTTTGTCCTGTAATTCATTaGAGCGTTCCCAAAATACAG | + |
|
Preference number: 4 (lower is better) Translates to: YTQQPNRIKITFLSSSELCPVIH*SVPKIQ Trigger: CTGTATTTTGGGAACGCTGCAATGAATTACAGGACA...AAGTTCACTGCTGGATAAAAATGTGATTTTAATCCTGTTGGGTTGCTGTGTATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
||
| CDS-3UTR GCA 90 bp | GAAAGCATCATAGATTTGATGAAATATGGTGCACTACTTAACACACTCAAACAGCATTGGAGTTTTAGTTaGCCGTTTCTTCTTTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ESIIDLMKYGALLNTLKQHWSFS*PFLLFC Trigger: GCAGAAAAGAAGAAACGGGCAACTAAAACTCCAATG...CTGTTTGAGTGTGTTAAGTAGTGCACCATATTTCATCAAATCTATGATGCTTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
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| CDS-3UTR CCA 90 bp | TATACACAGCAACCCAACAGGATTAAAATCACATTTTTATCCAGCAGTGAACTTAGCTTGTTAGATTGTTaGTCAATGAGTCTTCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: YTQQPNRIKITFLSSSELSLLDC*SMSLPC Trigger: GCAAGGAAGACTCATTGACCAACAATCTAACAAGCT...AAGTTCACTGCTGGATAAAAATGTGATTTTAATCCTGTTGGGTTGCTGTGTATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
||
| CDS-3UTR CCA 90 bp | AAAATGGAAACAGATTTAATGTTCTGCTCCAATATGCACACTTTTAAATGGCCCGATCTCAGGATTTCTTaGGACCTTGTAACCTATAGT | + |
|
Preference number: 4 (lower is better) Translates to: KMETDLMFCSNMHTFKWPDLRIS*DLVTYS Trigger: ACTATAGGTTACAAGGTCCCAAGAAATCCTGAGATC...GGGCCATTTAAAAGTGTGCATATTGGAGCAGAACATTAAATCTGTTTCCATTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
||
| CDS-3UTR TCA 90 bp | AAAATGGAAACAGATTTAATGTTCTGCTCCAATATGCACACTTTTAAATGGCCCCTTTCCACAAGCTTTTaGTCACCAAGGCAATTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: KMETDLMFCSNMHTFKWPLSTSF*SPRQFL Trigger: TAAAAATTGCCTTGGTGATCAAAAGCTTGTGGAAAG...GGGCCATTTAAAAGTGTGCATATTGGAGCAGAACATTAAATCTGTTTCCATTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
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| CDS-3UTR TCA 90 bp | AAAATGGAAACAGATTTAATGTTCTGCTCCAATATGCACACTTTTAAATGGCCCTCTCCACGTTCAATTTaGGCCATAATTTTCTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: KMETDLMFCSNMHTFKWPSPRSI*AIIFSM Trigger: CATTGAGAAAATTATGGCTCAAATTGAACGTGGAGA...GGGCCATTTAAAAGTGTGCATATTGGAGCAGAACATTAAATCTGTTTCCATTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
||
| CDS-3UTR GCA 90 bp | GAAAGCATCATAGATTTGATGAAATATGGTGCACTACTTAACACACTCAAACAGACGGAAATCAAGCTCTaGTTGTCATCTTTCTTTACT | + |
|
Preference number: 4 (lower is better) Translates to: ESIIDLMKYGALLNTLKQTEIKL*LSSFFT Trigger: AGTAAAGAAAGATGACAAGCAGAGCTTGATTTCCGT...CTGTTTGAGTGTGTTAAGTAGTGCACCATATTTCATCAAATCTATGATGCTTTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
||
| CDS-3UTR GCA 90 bp | GAAAGCATCATAGATTTGATGAAATATGGTGCACTACTTAACACACTCAAACAGAGAATCAAAGTCATCTaGAGAATTAAAGACATCCGG | + |
|
Preference number: 4 (lower is better) Translates to: ESIIDLMKYGALLNTLKQRIKVI*RIKDIR Trigger: CCGGATGTCTTTAATTCTGCAGATGACTTTGATTCT...CTGTTTGAGTGTGTTAAGTAGTGCACCATATTTCATCAAATCTATGATGCTTTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
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| CDS-3UTR CCA 90 bp | AAAATGGAAACAGATTTAATGTTCTGCTCCAATATGCACACTTTTAAATGGCCCAATAACACGGAGAGATaGAACCCATCGTTTAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: KMETDLMFCSNMHTFKWPNNTER*NPSFKF Trigger: GAATTTAAACGATGGGTTCCATCTCTCCGTGTTATT...GGGCCATTTAAAAGTGTGCATATTGGAGCAGAACATTAAATCTGTTTCCATTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
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| CDS-3UTR CCA 90 bp | TATACACAGCAACCCAACAGGATTAAAATCACATTTTTATCCAGCAGTGAACTTGAATTTGCTGCTATTTaGAGCATTGAAGGCATCTAT | + |
|
Preference number: 4 (lower is better) Translates to: YTQQPNRIKITFLSSSELEFAAI*SIEGIY Trigger: ATAGATGCCTTCAATGCTCCAAATAGCAGCAAATTC...AAGTTCACTGCTGGATAAAAATGTGATTTTAATCCTGTTGGGTTGCTGTGTATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
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| CDS-3UTR GCA 90 bp | GAAAGCATCATAGATTTGATGAAATATGGTGCACTACTTAACACACTCAAACAGGCAAAAAGTTCCGTCTaGTTCAGTAAAAACTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: ESIIDLMKYGALLNTLKQAKSSV*FSKNSN Trigger: ATTTGAGTTTTTACTGAAGCAGACGGAACTTTTTGC...CTGTTTGAGTGTGTTAAGTAGTGCACCATATTTCATCAAATCTATGATGCTTTC 34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
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| CDS CCA 90 bp | TGGACGGCCCGGGCTGCTCATCCTCTACAACCACGACTGTGGCTCTaGCATCCGAAACTGCCACGGTGGCTGCCTCTGTGGCCGTGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: WTARAAHPLQPRLWL*HPKLPRWLPLWPCP Trigger: CGGACACGGCCACAGAGGCAGCCACCGTGGCAGTTTCGGATGCCAGAGCCACAGTCGTGGTTGTAGAGGATGAGCAGCCCGGGCCGTCCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000077569.11 ENSMUST00000088973.11 ENSMUST00000101616.9 ENSMUST00000141084.3 ENSMUST00000153548.9 ENSMUST00000153587.2 |
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| CDS CCA 90 bp | CGACTGTGGCTCTGGCATCCGAAACTGCCACGGTGGCTGCCTCTGTaGCCGTGTCCGGCTCCATGGCGTTGGAGCGGGAAAGACGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RLWLWHPKLPRWLPL*PCPAPWRWSGKDEV Trigger: CACCTCGTCTTTCCCGCTCCAACGCCATGGAGCCGGACACGGCCACAGAGGCAGCCACCGTGGCAGTTTCGGATGCCAGAGCCACAGTCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153587.2 |
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| CDS CCA 90 bp | CCTCTACAACCACGACTGTGGCTCTGGCATCCGAAACTGCCACGGTaGCTGCCTCTGTGGCCGTGTCCGGCTCCATGGCGTTGGAGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: PLQPRLWLWHPKLPR*LPLWPCPAPWRWSG Trigger: CCCGCTCCAACGCCATGGAGCCGGACACGGCCACAGAGGCAGCCACCGTGGCAGTTTCGGATGCCAGAGCCACAGTCGTGGTTGTAGAGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153587.2 |
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| CDS GCA 90 bp | TACAACCACGACTGTGGCTCTGGCATCCGAAACTGCCACGGTGGCTaGCTCTGTGGCCGTGTCCGGCTCCATGGCGTTGGAGCGGGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: YNHDCGSGIRNCHGG*LCGRVRLHGVGAGK Trigger: CTTTCCCGCTCCAACGCCATGGAGCCGGACACGGCCACAGAGGCAGCCACCGTGGCAGTTTCGGATGCCAGAGCCACAGTCGTGGTTGTA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153587.2 |
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| CDS-3UTR CAA 90 bp | ACTTATTGCCAAAACAGGCTATCTTGTCTGCTCAGGGTTCTTTTGTATACACAGCTCCTCATCCTCTTCTaGTTCTGTACGCCTGTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: TYCQNRLSCLLRVLLYTQLLILF*FCTPVA Trigger: CGCCACAGGCGTACAGAACAAGAAGAGGATGAGGAG...CTGTGTATACAAAAGAACCCTGAGCAGACAAGATAGCCTGTTTTGGCAATAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
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| CDS-3UTR CAA 90 bp | ATTAAGATGGATGGCTTTAGGCTGGGATGGGAGATCAATAGTAAAGCATTAGCTCTCCTCATCCTCTTCTaGTTCTGTACGCCTGTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: IKMDGFRLGWEINSKALALLILF*FCTPVA Trigger: CGCCACAGGCGTACAGAACAAGAAGAGGATGAGGAG...AGCTAATGCTTTACTATTGATCTCCCATCCCAGCCTAAAGCCATCCATCTTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141084.3 |
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| CDS-3UTR CAA 90 bp | GAAAGCATCATAGATTTGATGAAATATGGTGCACTACTTAACACACTCAAACAGACCTCCTCAGGGGACTaGCCCTCCACCTCTCGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: ESIIDLMKYGALLNTLKQTSSGD*PSTSRA Trigger: AGCTCGAGAGGTGGAGGGCAAGTCCCCTGAGGAGGT...CTGTTTGAGTGTGTTAAGTAGTGCACCATATTTCATCAAATCTATGATGCTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
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| CDS-3UTR CAA 90 bp | GGCTTTAGGCTGGGATGGGAGATCAATAGTAAAGCATTAGCTAAGCACCCTGGCAAGCGATTAGTTGACTaGAACTCACGAACAATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GFRLGWEINSKALAKHPGKRLVD*NSRTIS Trigger: AGAGATTGTTCGTGAGTTCAAGTCAACTAATCGCTT...GCCAGGGTGCTTAGCTAATGCTTTACTATTGATCTCCCATCCCAGCCTAAAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141084.3 |
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| CDS-3UTR CAA 90 bp | GAATATATATTAAGATGGATGGCTTTAGGCTGGGATGGGAGATCAATAGTAAAGCGAGCCAGTTTCATGTaGAGAGGAGATGTTGGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: EYILRWMALGWDGRSIVKRASFM*RGDVGD Trigger: GTCTCCAACATCTCCTCTCAACATGAAACTGGCTCG...CTTTACTATTGATCTCCCATCCCAGCCTAAAGCCATCCATCTTAATATATATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141084.3 |
||
| CDS-3UTR CAA 90 bp | ACTTATTGCCAAAACAGGCTATCTTGTCTGCTCAGGGTTCTTTTGTATACACAGTGCCAGCTTGTTAGATaGTTGGTCAATGAGTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: TYCQNRLSCLLRVLLYTQCQLVR*LVNESS Trigger: GGAAGACTCATTGACCAACAATCTAACAAGCTGGCA...CTGTGTATACAAAAGAACCCTGAGCAGACAAGATAGCCTGTTTTGGCAATAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
||
| CDS-3UTR CAA 90 bp | ACTTATTGCCAAAACAGGCTATCTTGTCTGCTCAGGGTTCTTTTGTATACACAGTTTTTGCTCTTCTCTTaGAGCTATAGCTGGGTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: TYCQNRLSCLLRVLLYTQFLLFS*SYSWVG Trigger: CCCAACCCAGCTATAGCTCAAAGAGAAGAGCAAAAA...CTGTGTATACAAAAGAACCCTGAGCAGACAAGATAGCCTGTTTTGGCAATAAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
||
| CDS TCA 90 bp | TCTGTCAGCTCACTTTCTTTACAGGCAAAAACATGTGTAGCTCCATaGCGGATCATTTGTAGCATTTCCTCTTTTGCCAGCTTGTTAGAT | + |
|
Preference number: 5 (lower is better) Translates to: SVSSLSLQAKTCVAP*RIICSISSFASLLD Trigger: ATCTAACAAGCTGGCAAAAGAGGAAATGCTACAAATGATCCGTCATGGAGCTACACATGTTTTTGCCTGTAAAGAAAGTGAGCTGACAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000077569.11 ENSMUST00000088973.11 ENSMUST00000101616.9 ENSMUST00000153548.9 |
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| CDS-3UTR CAA 90 bp | GAAAGCATCATAGATTTGATGAAATATGGTGCACTACTTAACACACTCAAACAGCGAGCCAGTTTCATGTaGAGAGGAGATGTTGGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: ESIIDLMKYGALLNTLKQRASFM*RGDVGD Trigger: GTCTCCAACATCTCCTCTCAACATGAAACTGGCTCG...CTGTTTGAGTGTGTTAAGTAGTGCACCATATTTCATCAAATCTATGATGCTTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
||
| CDS-3UTR CAA 90 bp | AACAACTTATTTGATCAACTCAGGTTTCAGTCTTCACACCATCCCATCACTACTTTCTTCATGTGGGGTTaGTCCATCCAGTCGAGAATA | + |
|
Preference number: 5 (lower is better) Translates to: NNLFDQLRFQSSHHPITTFFMWG*SIQSRI Trigger: TATTCTCGACTGGATGGACAAACCCCACATGAAGAA...AGTAGTGATGGGATGGTGTGAAGACTGAAACCTGAGTTGATCAAATAAGTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
||
| CDS-3UTR CAA 90 bp | AAAATGGAAACAGATTTAATGTTCTGCTCCAATATGCACACTTTTAAATGGCCCCTTCTCTTCAGTCTCTaGTGGTGTAAGAGGTTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: KMETDLMFCSNMHTFKWPLLFSL*WCKRFR Trigger: GCGGAACCTCTTACACCACAAGAGACTGAAGAGAAG...GGGCCATTTAAAAGTGTGCATATTGGAGCAGAACATTAAATCTGTTTCCATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
||
| CDS-3UTR CAA 90 bp | AACAACTTATTTGATCAACTCAGGTTTCAGTCTTCACACCATCCCATCACTACTATGGAGCCTTGTATCTaGCAATTTTGGCATCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: NNLFDQLRFQSSHHPITTMEPCI*QFWHPV Trigger: CACTGGATGCCAAAATTGCAAGATACAAGGCTCCAT...AGTAGTGATGGGATGGTGTGAAGACTGAAACCTGAGTTGATCAAATAAGTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
||
| CDS CCA 90 bp | TTTAATTACCATCTCATAAGAAGTCACGCAAACATCCCACTCTCCTaGCATCATTTCATCACGAATAAAAGCTGCTCTCACATCTTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: FNYHLIRSHANIPLS*HHFITNKSCSHIFV Trigger: GACAAAGATGTGAGAGCAGCTTTTATTCGTGATGAAATGATGCCAGGAGAGTGGGATGTTTGCGTGACTTCTTATGAGATGGTAATTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000077569.11 ENSMUST00000088973.11 ENSMUST00000101616.9 ENSMUST00000141084.3 ENSMUST00000153548.9 |
||
| CDS-3UTR CAA 90 bp | ACTTATTGCCAAAACAGGCTATCTTGTCTGCTCAGGGTTCTTTTGTATACACAGAAGCGATTAGTTGACTaGAACTCACGAACAATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TYCQNRLSCLLRVLLYTQKRLVD*NSRTIS Trigger: AGAGATTGTTCGTGAGTTCAAGTCAACTAATCGCTT...CTGTGTATACAAAAGAACCCTGAGCAGACAAGATAGCCTGTTTTGGCAATAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
||
| CDS-3UTR CAA 90 bp | AACAACTTATTTGATCAACTCAGGTTTCAGTCTTCACACCATCCCATCACTACTACCATTTTACCACTATaGCCGACAATGTGCTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: NNLFDQLRFQSSHHPITTTILPL*PTMCSS Trigger: AGATGAGCACATTGTCGGCAATAGTGGTAAAATGGT...AGTAGTGATGGGATGGTGTGAAGACTGAAACCTGAGTTGATCAAATAAGTTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
||
| CDS-3UTR CAA 90 bp | TATACACAGCAACCCAACAGGATTAAAATCACATTTTTATCCAGCAGTGAACTTCTGCTATTTGGAGCATaGAAGGCATCTATCGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: YTQQPNRIKITFLSSSELLLFGA*KASIAS Trigger: GGAAGCGATAGATGCCTTCAATGCTCCAAATAGCAG...AAGTTCACTGCTGGATAAAAATGTGATTTTAATCCTGTTGGGTTGCTGTGTATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
||
| CDS-3UTR CAA 90 bp | AAAATGGAAACAGATTTAATGTTCTGCTCCAATATGCACACTTTTAAATGGCCCCTCTCTTCCACTGTGTaGTCTGTAATGAGACGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: KMETDLMFCSNMHTFKWPLSSTV*SVMRRK Trigger: CTTCCGTCTCATTACAGACAACACAGTGGAAGAGAG...GGGCCATTTAAAAGTGTGCATATTGGAGCAGAACATTAAATCTGTTTCCATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
||
| CDS-3UTR CAA 90 bp | ACTTATTGCCAAAACAGGCTATCTTGTCTGCTCAGGGTTCTTTTGTATACACAGCCAGTTTGTGAAACCTaGTGTGAGAAGTTTATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: TYCQNRLSCLLRVLLYTQPVCET*CEKFIL Trigger: AAGGATAAACTTCTCACACAAGGTTTCACAAACTGG...CTGTGTATACAAAAGAACCCTGAGCAGACAAGATAGCCTGTTTTGGCAATAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
||
| CDS-3UTR CAA 90 bp | ATTAAGATGGATGGCTTTAGGCTGGGATGGGAGATCAATAGTAAAGCATTAGCTAAAACTCAAATCTCTTaGCGCGGTCTGCTTTCATTT | + |
|
Preference number: 5 (lower is better) Translates to: IKMDGFRLGWEINSKALAKTQIS*RGLLSF Trigger: AAATGAAAGCAGACCGCGCAAAGAGATTTGAGTTTT...AGCTAATGCTTTACTATTGATCTCCCATCCCAGCCTAAAGCCATCCATCTTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141084.3 |
||
| CDS CCA 90 bp | GTTCTTTCCTTTACTGGTTCCATACTGAATACGCAACTGATGAAATaGAGCCTTGTATCTTGCAATTTTGGCATCCAGTGCTTTCTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: VLSFTGSILNTQLMK*SLVSCNFGIQCFLN Trigger: ATTAAGAAAGCACTGGATGCCAAAATTGCAAGATACAAGGCTCCATTTCATCAGTTGCGTATTCAGTATGGAACCAGTAAAGGAAAGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077569.11 ENSMUST00000088973.11 ENSMUST00000101616.9 |
||
| CDS-3UTR CAA 90 bp | GAAAGCATCATAGATTTGATGAAATATGGTGCACTACTTAACACACTCAAACAGAAAACTCAAATCTCTTaGCGCGGTCTGCTTTCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: ESIIDLMKYGALLNTLKQKTQIS*RGLLSR Trigger: CCTTGAAAGCAGACCGCGCAAAGAGATTTGAGTTTT...CTGTTTGAGTGTGTTAAGTAGTGCACCATATTTCATCAAATCTATGATGCTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
||
| CDS-3UTR CAA 90 bp | AACAACTTATTTGATCAACTCAGGTTTCAGTCTTCACACCATCCCATCACTACTGAAATCAAGCTCTGCTaGTCATCTTTCTTTACTCGA | + |
|
Preference number: 5 (lower is better) Translates to: NNLFDQLRFQSSHHPITTEIKLC*SSFFTR Trigger: TCGAGTAAAGAAAGATGACAAGCAGAGCTTGATTTC...AGTAGTGATGGGATGGTGTGAAGACTGAAACCTGAGTTGATCAAATAAGTTGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
||
| CDS-3UTR CAA 90 bp | ACTTATTGCCAAAACAGGCTATCTTGTCTGCTCAGGGTTCTTTTGTATACACAGTCTTTCCACAAGCTTTaGATCACCAAGGCAATTTTT | + |
|
Preference number: 5 (lower is better) Translates to: TYCQNRLSCLLRVLLYTQSFHKL*ITKAIF Trigger: AAAAATTGCCTTGGTGATCAAAAGCTTGTGGAAAGA...CTGTGTATACAAAAGAACCCTGAGCAGACAAGATAGCCTGTTTTGGCAATAAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
||
| CDS-3UTR CAA 90 bp | GAAAGCATCATAGATTTGATGAAATATGGTGCACTACTTAACACACTCAAACAGCGCATCTTGTCCATCTaGCCAGAAGAGTTTAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: ESIIDLMKYGALLNTLKQRILSI*PEEFKT Trigger: TGTCTTAAACTCTTCTGGCAAGATGGACAAGATGCG...CTGTTTGAGTGTGTTAAGTAGTGCACCATATTTCATCAAATCTATGATGCTTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
||
| CDS-3UTR CAA 90 bp | ACTTATTGCCAAAACAGGCTATCTTGTCTGCTCAGGGTTCTTTTGTATACACAGTTGTATCTTGCAATTTaGGCATCCAGTGCTTTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: TYCQNRLSCLLRVLLYTQLYLAI*ASSAFL Trigger: TAAGAAAGCACTGGATGCCAAAATTGCAAGATACAA...CTGTGTATACAAAAGAACCCTGAGCAGACAAGATAGCCTGTTTTGGCAATAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
||
| CDS-3UTR CAA 90 bp | GAATATATATTAAGATGGATGGCTTTAGGCTGGGATGGGAGATCAATAGTAAAGGAAATCAAGCTCTGCTaGTCATCTTTCTTTACTCGA | + |
|
Preference number: 5 (lower is better) Translates to: EYILRWMALGWDGRSIVKEIKLC*SSFFTR Trigger: TCGAGTAAAGAAAGATGACAAGCAGAGCTTGATTTC...CTTTACTATTGATCTCCCATCCCAGCCTAAAGCCATCCATCTTAATATATATTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141084.3 |
||
| CDS-3UTR CAA 90 bp | AACAACTTATTTGATCAACTCAGGTTTCAGTCTTCACACCATCCCATCACTACTTTATGTAAAGTAGACTaGGGAACTAAAACCATGTGG | + |
|
Preference number: 5 (lower is better) Translates to: NNLFDQLRFQSSHHPITTLCKVD*GTKTMW Trigger: CCACATGGTTTTAGTTCCCAAGTCTACTTTACATAA...AGTAGTGATGGGATGGTGTGAAGACTGAAACCTGAGTTGATCAAATAAGTTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
||
| CDS-3UTR CAA 90 bp | TATACACAGCAACCCAACAGGATTAAAATCACATTTTTATCCAGCAGTGAACTTTGTATACCATTCTCGTaGCATTTTACTCAGGCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: YTQQPNRIKITFLSSSELCIPFS*HFTQAQ Trigger: TTGGGCCTGAGTAAAATGCAACGAGAATGGTATACA...AAGTTCACTGCTGGATAAAAATGTGATTTTAATCCTGTTGGGTTGCTGTGTATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
||
| CDS-3UTR CAA 90 bp | TATACACAGCAACCCAACAGGATTAAAATCACATTTTTATCCAGCAGTGAACTTCAGCTTGTTAGATTGTaGGTCAATGAGTCTTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: YTQQPNRIKITFLSSSELQLVRL*VNESSL Trigger: CAAGGAAGACTCATTGACCAACAATCTAACAAGCTG...AAGTTCACTGCTGGATAAAAATGTGATTTTAATCCTGTTGGGTTGCTGTGTATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
||
| CDS-3UTR CAA 90 bp | AAAATGGAAACAGATTTAATGTTCTGCTCCAATATGCACACTTTTAAATGGCCCTCCTCTTTTGCCAGCTaGTTAGATTGTTGGTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: KMETDLMFCSNMHTFKWPSSFAS*LDCWSM Trigger: CATTGACCAACAATCTAACAAGCTGGCAAAAGAGGA...GGGCCATTTAAAAGTGTGCATATTGGAGCAGAACATTAAATCTGTTTCCATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
||
| CDS-3UTR CAA 90 bp | TATACACAGCAACCCAACAGGATTAAAATCACATTTTTATCCAGCAGTGAACTTTCCTTCGCTGAATTCTaGCTTCTCCACGTTCAATTT | + |
|
Preference number: 5 (lower is better) Translates to: YTQQPNRIKITFLSSSELSFAEF*LLHVQF Trigger: AAATTGAACGTGGAGAAGCAAGAATTCAGCGAAGGA...AAGTTCACTGCTGGATAAAAATGTGATTTTAATCCTGTTGGGTTGCTGTGTATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
||
| CDS-3UTR CAA 90 bp | GAATATATATTAAGATGGATGGCTTTAGGCTGGGATGGGAGATCAATAGTAAAGTTATGTAAAGTAGACTaGGGAACTAAAACCATGTGG | + |
|
Preference number: 5 (lower is better) Translates to: EYILRWMALGWDGRSIVKLCKVD*GTKTMW Trigger: CCACATGGTTTTAGTTCCCAAGTCTACTTTACATAA...CTTTACTATTGATCTCCCATCCCAGCCTAAAGCCATCCATCTTAATATATATTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141084.3 |
||
| CDS-3UTR CAA 90 bp | TATACACAGCAACCCAACAGGATTAAAATCACATTTTTATCCAGCAGTGAACTTCACTGTACCCAGCTTTaGTTTTTCTCTGTAATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: YTQQPNRIKITFLSSSELHCTQL*FFSVIF Trigger: GAAGATTACAGAGAAAAACAAAAGCTGGGTACAGTG...AAGTTCACTGCTGGATAAAAATGTGATTTTAATCCTGTTGGGTTGCTGTGTATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
||
| CDS-3UTR CAA 90 bp | TATACACAGCAACCCAACAGGATTAAAATCACATTTTTATCCAGCAGTGAACTTATGTCCTGTAATTCATaGCAGCGTTCCCAAAATACA | + |
|
Preference number: 5 (lower is better) Translates to: YTQQPNRIKITFLSSSELMSCNS*QRSQNT Trigger: TGTATTTTGGGAACGCTGCAATGAATTACAGGACAT...AAGTTCACTGCTGGATAAAAATGTGATTTTAATCCTGTTGGGTTGCTGTGTATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
||
| CDS-3UTR CAA 90 bp | TATACACAGCAACCCAACAGGATTAAAATCACATTTTTATCCAGCAGTGAACTTAGCATAAAGATGAATTaGCTGCTATTTGGAGCATTG | + |
|
Preference number: 5 (lower is better) Translates to: YTQQPNRIKITFLSSSELSIKMN*LLFGAL Trigger: CAATGCTCCAAATAGCAGCAAATTCATCTTTATGCT...AAGTTCACTGCTGGATAAAAATGTGATTTTAATCCTGTTGGGTTGCTGTGTATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
||
| CDS-3UTR CAA 90 bp | GAAAGCATCATAGATTTGATGAAATATGGTGCACTACTTAACACACTCAAACAGCTGTCAAAACCCATTTaGTGTAACATACAGATCAAG | + |
|
Preference number: 5 (lower is better) Translates to: ESIIDLMKYGALLNTLKQLSKPI*CNIQIK Trigger: CTTGATCTGTATGTTACACAAAATGGGTTTTGACAG...CTGTTTGAGTGTGTTAAGTAGTGCACCATATTTCATCAAATCTATGATGCTTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088973.11 |
||
| CDS CCA 72 bp | CCACGGTGGCTGCCTCTGTGGCCGTGTCCGGCTCCATaGCGTTGGAGCGGGAAAGACGAGGTGGGACGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: PRWLPLWPCPAP*RWSGKDEVGRG Trigger: TCCTCGTCCCACCTCGTCTTTCCCGCTCCAACGCCATGGAGCCGGACACGGCCACAGAGGCAGCCACCGTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153587.2 |
||
| CDS CAA 72 bp | GTGGCTGCCTCTGTGGCCGTGTCCGGCTCCATGGCGTaGGAGCGGGAAAGACGAGGTGGGACGAGGAAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: VAASVAVSGSMA*ERERRGGTRKG Trigger: CCCCTTCCTCGTCCCACCTCGTCTTTCCCGCTCCAACGCCATGGAGCCGGACACGGCCACAGAGGCAGCCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153587.2 |
||
| CDS CCA 72 bp | TGGCTGCCTCTGTGGCCGTGTCCGGCTCCATGGCGTTaGAGCGGGAAAGACGAGGTGGGACGAGGAAGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: WLPLWPCPAPWR*SGKDEVGRGRG Trigger: TCCCCTTCCTCGTCCCACCTCGTCTTTCCCGCTCCAACGCCATGGAGCCGGACACGGCCACAGAGGCAGCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153587.2 |
||
| CDS CCA 72 bp | CCACGACTGTGGCTCTGGCATCCGAAACTGCCACGGTaGCTGCCTCTGTGGCCGTGTCCGGCTCCATGGCGT | + |
|
Preference number: 6 (lower is better) Translates to: PRLWLWHPKLPR*LPLWPCPAPWR Trigger: ACGCCATGGAGCCGGACACGGCCACAGAGGCAGCCACCGTGGCAGTTTCGGATGCCAGAGCCACAGTCGTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153587.2 |
||
| CDS GCA 72 bp | GACTGTGGCTCTGGCATCCGAAACTGCCACGGTGGCTaGCTCTGTGGCCGTGTCCGGCTCCATGGCGTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: DCGSGIRNCHGG*LCGRVRLHGVG Trigger: TCCAACGCCATGGAGCCGGACACGGCCACAGAGGCAGCCACCGTGGCAGTTTCGGATGCCAGAGCCACAGTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153587.2 |
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| CDS CCA 72 bp | CTCTGGCATCCGAAACTGCCACGGTGGCTGCCTCTGTaGCCGTGTCCGGCTCCATGGCGTTGGAGCGGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: LWHPKLPRWLPL*PCPAPWRWSGK Trigger: TTTCCCGCTCCAACGCCATGGAGCCGGACACGGCCACAGAGGCAGCCACCGTGGCAGTTTCGGATGCCAGAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153587.2 |
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| CDS GCA 72 bp | CTCTACAACCACGACTGTGGCTCTGGCATCCGAAACTaGCACGGTGGCTGCCTCTGTGGCCGTGTCCGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LYNHDCGSGIRN*HGGCLCGRVRL Trigger: GAGCCGGACACGGCCACAGAGGCAGCCACCGTGGCAGTTTCGGATGCCAGAGCCACAGTCGTGGTTGTAGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000077569.11 ENSMUST00000088973.11 ENSMUST00000101616.9 ENSMUST00000141084.3 ENSMUST00000153548.9 ENSMUST00000153587.2 |
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| CDS CCA 72 bp | CGGGCTGCTCATCCTCTACAACCACGACTGTGGCTCTaGCATCCGAAACTGCCACGGTGGCTGCCTCTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: RAAHPLQPRLWL*HPKLPRWLPLW Trigger: CCACAGAGGCAGCCACCGTGGCAGTTTCGGATGCCAGAGCCACAGTCGTGGTTGTAGAGGATGAGCAGCCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000077569.11 ENSMUST00000088973.11 ENSMUST00000101616.9 ENSMUST00000141084.3 ENSMUST00000153548.9 ENSMUST00000153587.2 |
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| CDS CCA 72 bp | CACTGTGTTGTCTGTAATGAGACGGAAGACTCGTACTaGCTTCTTCTGACCAATGCGATGTGCCCGATCCAT | + |
|
Preference number: 6 (lower is better) Translates to: HCVVCNETEDSY*LLLTNAMCPIH Trigger: ATGGATCGGGCACATCGCATTGGTCAGAAGAAGCCAGTACGAGTCTTCCGTCTCATTACAGACAACACAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077569.11 ENSMUST00000088973.11 ENSMUST00000101616.9 ENSMUST00000153548.9 |
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| CDS CAA 90 bp | CGTTCCCAAAATACAGCTGAATACTCCATGACCTCCTCAGGGGACTaGCCCTCCACCTCTCGAGCTATATTATCAATGTCATCTCTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: RSQNTAEYSMTSSGD*PSTSRAILSMSSLP Trigger: TGGGAGAGATGACATTGATAATATAGCTCGAGAGGTGGAGGGCAAGTCCCCTGAGGAGGTCATGGAGTATTCAGCTGTATTTTGGGAACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000077569.11 ENSMUST00000088973.11 ENSMUST00000101616.9 |
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| CDS TCA 72 bp | CATCTTTCTTTACTCGAGGACGAGCCAGTTTCATGTTaGGAGGAGATGTTGGAGACTTCTGTGCTGAAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: HLSLLEDEPVSC*EEMLETSVLKA Trigger: AGCCTTCAGCACAGAAGTCTCCAACATCTCCTCTCAACATGAAACTGGCTCGTCCTCGAGTAAAGAAAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000077569.11 ENSMUST00000088973.11 ENSMUST00000101616.9 ENSMUST00000141084.3 ENSMUST00000153548.9 |
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| CDS CAA 72 bp | TCATCTTTCTTTACTCGAGGACGAGCCAGTTTCATGTaGAGAGGAGATGTTGGAGACTTCTGTGCTGAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SSFFTRGRASFM*RGDVGDFCAEG Trigger: GCCTTCAGCACAGAAGTCTCCAACATCTCCTCTCAACATGAAACTGGCTCGTCCTCGAGTAAAGAAAGATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000077569.11 ENSMUST00000088973.11 ENSMUST00000101616.9 ENSMUST00000141084.3 ENSMUST00000153548.9 |
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| CDS CAA 72 bp | ATCTCAGCTCTTTCTACAATCCTCTCTTCCACTGTGTaGTCTGTAATGAGACGGAAGACTCGTACTGGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: ISALSTILSSTV*SVMRRKTRTGF Trigger: GAAGCCAGTACGAGTCTTCCGTCTCATTACAGACAACACAGTGGAAGAGAGGATTGTAGAAAGAGCTGAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077569.11 ENSMUST00000088973.11 ENSMUST00000101616.9 ENSMUST00000153548.9 |
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| CDS CAA 72 bp | AGTCCTCCAGCCCTAGTACTCAGCATAAAGATGAATTaGCTGCTATTTGGAGCATTGAAGGCATCTATCGCT | + |
|
Preference number: 6 (lower is better) Translates to: SPPALVLSIKMN*LLFGALKASIA Trigger: AGCGATAGATGCCTTCAATGCTCCAAATAGCAGCAAATTCATCTTTATGCTGAGTACTAGGGCTGGAGGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077569.11 ENSMUST00000088973.11 ENSMUST00000101616.9 ENSMUST00000153548.9 |
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| CDS CAA 90 bp | TTAATTCCGAGTCCTCCAGCCCTAGTACTCAGCATAAAGATGAATTaGCTGCTATTTGGAGCATTGAAGGCATCTATCGCTTCCTCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LIPSPPALVLSIKMN*LLFGALKASIASSL Trigger: AAGAGAGGAAGCGATAGATGCCTTCAATGCTCCAAATAGCAGCAAATTCATCTTTATGCTGAGTACTAGGGCTGGAGGACTCGGAATTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077569.11 ENSMUST00000088973.11 ENSMUST00000101616.9 |
||
| CDS TCA 72 bp | CTATTTGGAGCATTGAAGGCATCTATCGCTTCCCTTTaGCCCAATAATTCCACTTCCAGGAACTTATCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LFGALKASIASL*PNNSTSRNLSS Trigger: AGAGGATAAGTTCCTGGAAGTGGAATTATTGGGTCAAAGGGAAGCGATAGATGCCTTCAATGCTCCAAATAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153548.9 |
||
| CDS CCA 72 bp | TTGAGCTATAGCTGGGTTGGGGATCTCAGGATTTCTTaGGACCTTGTAACCTATAGTCTTCCGATAATAAAG | + |
|
Preference number: 6 (lower is better) Translates to: LSYSWVGDLRIS*DLVTYSLPIIK Trigger: CTTTATTATCGGAAGACTATAGGTTACAAGGTCCCAAGAAATCCTGAGATCCCCAACCCAGCTATAGCTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077569.11 ENSMUST00000088973.11 ENSMUST00000101616.9 |
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| CDS TCA 72 bp | TCACTTTCTTTACAGGCAAAAACATGTGTAGCTCCATaGCGGATCATTTGTAGCATTTCCTCTTTTGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SLSLQAKTCVAP*RIICSISSFAS Trigger: GCTGGCAAAAGAGGAAATGCTACAAATGATCCGTCATGGAGCTACACATGTTTTTGCCTGTAAAGAAAGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000077569.11 ENSMUST00000088973.11 ENSMUST00000101616.9 ENSMUST00000153548.9 |
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| CDS GCA 72 bp | CCACTCTCCTGGCATCATTTCATCACGAATAAAAGCTaGTCTCACATCTTTGTCTCCAACGAAACAAATAAC | + |
|
Preference number: 6 (lower is better) Translates to: PLSWHHFITNKS*SHIFVSNETNN Trigger: GTTATTTGTTTCGTTGGAGACAAAGATGTGAGAGCAGCTTTTATTCGTGATGAAATGATGCCAGGAGAGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000077569.11 ENSMUST00000088973.11 ENSMUST00000101616.9 ENSMUST00000141084.3 ENSMUST00000153548.9 |
||
| CDS CCA 72 bp | TTTACTGGTTCCATACTGAATACGCAACTGATGAAATaGAGCCTTGTATCTTGCAATTTTGGCATCCAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: FTGSILNTQLMK*SLVSCNFGIQC Trigger: GCACTGGATGCCAAAATTGCAAGATACAAGGCTCCATTTCATCAGTTGCGTATTCAGTATGGAACCAGTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077569.11 ENSMUST00000088973.11 ENSMUST00000101616.9 |
||
| CDS CAA 72 bp | ACCTTGTGTGAGAAGTTTATCCTTCTCTTCAGTCTCTaGTGGTGTAAGAGGTTCCGCTCCATCAATCTTTTT | + |
|
Preference number: 6 (lower is better) Translates to: TLCEKFILLFSL*WCKRFRSINLF Trigger: AAAAAGATTGATGGAGCGGAACCTCTTACACCACAAGAGACTGAAGAGAAGGATAAACTTCTCACACAAGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077569.11 ENSMUST00000088973.11 ENSMUST00000101616.9 |
||
| CDS GCA 72 bp | AAATGGAGCCTTGTATCTTGCAATTTTGGCATCCAGTaGTTTCTTAATACTGATCCTTCGCTGAATTCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: KWSLVSCNFGIQ*FLNTDPSLNSC Trigger: GCAAGAATTCAGCGAAGGATCAGTATTAAGAAAGCACTGGATGCCAAAATTGCAAGATACAAGGCTCCATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077569.11 ENSMUST00000088973.11 ENSMUST00000101616.9 |
||
| CDS CAA 72 bp | AAAGTTCCGTCTGCTTCAGTAAAAACTCAAATCTCTTaGCGCGGTCTGCTTTCAAGGGCATATTTACCATTT | + |
|
Preference number: 6 (lower is better) Translates to: KVPSASVKTQIS*RGLLSRAYLPF Trigger: AAATGGTAAATATGCCCTTGAAAGCAGACCGCGCAAAGAGATTTGAGTTTTTACTGAAGCAGACGGAACTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077569.11 ENSMUST00000088973.11 ENSMUST00000101616.9 |
||
| CDS GCA 72 bp | AAATTAAGTAATGCCCAGAGCTCATGCAAGTTATTCTaGAAAGGTGTCCCAGTTAGAAGTAAGCGATTAGTT | + |
|
Preference number: 6 (lower is better) Translates to: KLSNAQSSCKLF*KGVPVRSKRLV Trigger: AACTAATCGCTTACTTCTAACTGGGACACCTTTGCAGAATAACTTGCATGAGCTCTGGGCATTACTTAATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000077569.11 ENSMUST00000088973.11 ENSMUST00000101616.9 ENSMUST00000141084.3 ENSMUST00000153548.9 |
||
| CDS TCA 72 bp | TTTTCAATCAATGAAATCAAAGTATTACAGCGTCTCTaGAATTCCATGGCAGTTCTCGACTTGATGAACCAG | + |
|
Preference number: 6 (lower is better) Translates to: FSINEIKVLQRL*NSMAVLDLMNQ Trigger: CTGGTTCATCAAGTCGAGAACTGCCATGGAATTTCAGAGACGCTGTAATACTTTGATTTCATTGATTGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077569.11 ENSMUST00000088973.11 ENSMUST00000101616.9 |
||
| CDS CCA 72 bp | ATCTTTGTCTCCAACGAAACAAATAACACGGAGAGATaGAACCCATCGTTTAAATTCATTCATCCAGTTATG | + |
|
Preference number: 6 (lower is better) Translates to: IFVSNETNNTER*NPSFKFIHPVM Trigger: CATAACTGGATGAATGAATTTAAACGATGGGTTCCATCTCTCCGTGTTATTTGTTTCGTTGGAGACAAAGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000077569.11 ENSMUST00000088973.11 ENSMUST00000101616.9 ENSMUST00000141084.3 ENSMUST00000153548.9 |
||
| CDS CCA 72 bp | TGTAGCATTTCCTCTTTTGCCAGCTTGTTAGATTGTTaGTCAATGAGTCTTCCTTGCTGTATAACAATTGAA | + |
|
Preference number: 6 (lower is better) Translates to: CSISSFASLLDC*SMSLPCCITIE Trigger: TTCAATTGTTATACAGCAAGGAAGACTCATTGACCAACAATCTAACAAGCTGGCAAAAGAGGAAATGCTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077569.11 ENSMUST00000088973.11 ENSMUST00000101616.9 ENSMUST00000153548.9 |
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| CDS CAA 72 bp | TGCATCAGAATATTCAAGAGTCGCATCTTGTCCATCTaGCCAGAAGAGTTTAAGACATCAATATCTTTCATC | + |
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Preference number: 6 (lower is better) Translates to: CIRIFKSRILSI*PEEFKTSISFI Trigger: GATGAAAGATATTGATGTCTTAAACTCTTCTGGCAAGATGGACAAGATGCGACTCTTGAATATTCTGATGCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077569.11 ENSMUST00000088973.11 ENSMUST00000101616.9 ENSMUST00000153548.9 |
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| CDS CAA 90 bp | TTTCGGAGCTGCATCAGAATATTCAAGAGTCGCATCTTGTCCATCTaGCCAGAAGAGTTTAAGACATCAATATCTTTCATCAGAATTTTT | + |
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Preference number: 6 (lower is better) Translates to: FRSCIRIFKSRILSI*PEEFKTSISFIRIF Trigger: AAAAATTCTGATGAAAGATATTGATGTCTTAAACTCTTCTGGCAAGATGGACAAGATGCGACTCTTGAATATTCTGATGCAGCTCCGAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077569.11 ENSMUST00000088973.11 ENSMUST00000101616.9 ENSMUST00000153548.9 |
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| CDS TCA 72 bp | TTGTTGGTCAATGAGTCTTCCTTGCTGTATAACAATTaGATCAAGTCTCAGTTTTATCTCAGCTCTTTCTAC | + |
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Preference number: 6 (lower is better) Translates to: LLVNESSLLYNN*IKSQFYLSSFY Trigger: GTAGAAAGAGCTGAGATAAAACTGAGACTTGATTCAATTGTTATACAGCAAGGAAGACTCATTGACCAACAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077569.11 ENSMUST00000088973.11 ENSMUST00000101616.9 ENSMUST00000153548.9 |
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