Pregenerated sensors for SMAP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026155Ensembl transcript IDs: ENSMUST00000027339.14, ENSMUST00000129254.8
Found 128 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTTCCCAATGTGGCTTAGGACATCATGGGGAGTATGAGCAAAGCTaGCCTCCACACAGATGGTTTCTCAACCTGCTTTCACATCCAATT | + |
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Preference number: 1 (lower is better) Translates to: ASQCGLGHHGEYEQS*PPHRWFLNLLSHPI Trigger: AATTGGATGTGAAAGCAGGTTGAGAAACCATCTGTGTGGAGGGCAGCTTTGCTCATACTCCCCATGATGTCCTAAGCCACATTGGGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027339.14 |
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| 3UTR GCA 90 bp | GGGAGTATGAGCAAAGCTGCCCTCCACACAGATGGTTTCTCAACCTaGTTTCACATCCAATTTAATCAGCACAGACCAACACGGTCAATC | + |
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Preference number: 1 (lower is better) Translates to: GSMSKAALHTDGFST*FHIQFNQHRPTRSI Trigger: GATTGACCGTGTTGGTCTGTGCTGATTAAATTGGATGTGAAAGCAGGTTGAGAAACCATCTGTGTGGAGGGCAGCTTTGCTCATACTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027339.14 |
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| 3UTR TCA 90 bp | TATGTACATGAGAAGAGGCCCACATTACAAGAGGCAATGGAAATTTaGATTCTGAAACCTTCATTGAGTTTTACAGTAGCATCCAGGTTT | + |
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Preference number: 1 (lower is better) Translates to: YVHEKRPTLQEAMEI*ILKPSLSFTVASRF Trigger: AAACCTGGATGCTACTGTAAAACTCAATGAAGGTTTCAGAATTCAAATTTCCATTGCCTCTTGTAATGTGGGCCTCTTCTCATGTACATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027339.14 |
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| 3UTR-3UTR TCA 90 bp | CAGTACCTTTCTACAGGATTACTGGCTAATTTGGGGGTGGGGTTTATACTGTTAACATCATGGGGAGTATaGGCAAAGCTGCCCTCCACA | + |
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Preference number: 2 (lower is better) Translates to: QYLSTGLLANLGVGFILLTSWGV*AKLPST Trigger: TGTGGAGGGCAGCTTTGCTCATACTCCCCATGATGT...TAACAGTATAAACCCCACCCCCAAATTAGCCAGTAATCCTGTAGAAAGGTACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027339.14 |
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| 3UTR-3UTR CCA 90 bp | TCAGCACAGACCAACACGGTCAATCAGGTCATTCTTAATGTGAGCAAATGGGGGATGTACATGAATAAATaGGAACTAGATGCCTTTGCA | + |
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Preference number: 2 (lower is better) Translates to: SAQTNTVNQVILNVSKWGMYMNK*ELDAFA Trigger: TGCAAAGGCATCTAGTTCCCATTTATTCATGTACAT...CCCCCATTTGCTCACATTAAGAATGACCTGATTGACCGTGTTGGTCTGTGCTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027339.14 |
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| 3UTR-3UTR CCA 90 bp | GTTTATCTCCGTTCACTAACCACGTTCCCTGTTAAGCACATCATAACAACAGCAGATTACTGGCTAATTTaGGGGTGGGGTTTATACTGT | + |
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Preference number: 2 (lower is better) Translates to: VYLRSLTTFPVKHIITTADYWLI*GWGLYC Trigger: ACAGTATAAACCCCACCCCCAAATTAGCCAGTAATC...TGCTGTTGTTATGATGTGCTTAACAGGGAACGTGGTTAGTGAACGGAGATAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027339.14 |
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| 3UTR-3UTR GCA 90 bp | GGCACCATAAAATGTAAACACAATTACTGTCATAAACCTGGATATACCTTCAAGGAGTATGAGCAAAGCTaGCCTCCACACAGATGGTTT | + |
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Preference number: 2 (lower is better) Translates to: GTIKCKHNYCHKPGYTFKEYEQS*PPHRWF Trigger: AAACCATCTGTGTGGAGGGCAGCTTTGCTCATACTC...CTTGAAGGTATATCCAGGTTTATGACAGTAATTGTGTTTACATTTTATGGTGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027339.14 |
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| 3UTR-3UTR TCA 90 bp | GGCACCATAAAATGTAAACACAATTACTGTCATAAACCTGGATATACCTTCAAGTTAGCACTATGTACATaGGAAGAGGCCCACATTACA | + |
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Preference number: 2 (lower is better) Translates to: GTIKCKHNYCHKPGYTFKLALCT*EEAHIT Trigger: TGTAATGTGGGCCTCTTCTCATGTACATAGTGCTAA...CTTGAAGGTATATCCAGGTTTATGACAGTAATTGTGTTTACATTTTATGGTGCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027339.14 |
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| 3UTR TCA 72 bp | AGCTTCCCAATGTGGCTTAGGACATCATGGGGAGTATaGGCAAAGCTGCCCTCCACACAGATGGTTTCTCAA | + |
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Preference number: 3 (lower is better) Translates to: SFPMWLRTSWGV*AKLPSTQMVSQ Trigger: TTGAGAAACCATCTGTGTGGAGGGCAGCTTTGCTCATACTCCCCATGATGTCCTAAGCCACATTGGGAAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027339.14 |
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| 3UTR GCA 72 bp | TGTGGCTTAGGACATCATGGGGAGTATGAGCAAAGCTaGCCTCCACACAGATGGTTTCTCAACCTGCTTTCA | + |
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Preference number: 3 (lower is better) Translates to: CGLGHHGEYEQS*PPHRWFLNLLS Trigger: TGAAAGCAGGTTGAGAAACCATCTGTGTGGAGGGCAGCTTTGCTCATACTCCCCATGATGTCCTAAGCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027339.14 |
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| 3UTR GCA 72 bp | AGCAAAGCTGCCCTCCACACAGATGGTTTCTCAACCTaGTTTCACATCCAATTTAATCAGCACAGACCAACA | + |
|
Preference number: 3 (lower is better) Translates to: SKAALHTDGFST*FHIQFNQHRPT Trigger: TGTTGGTCTGTGCTGATTAAATTGGATGTGAAAGCAGGTTGAGAAACCATCTGTGTGGAGGGCAGCTTTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027339.14 |
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| CDS-3UTR CCA 90 bp | TGGGAACTAGATGCCTTTGCAGCGAGGAATGTTGGGGTCGGTTCTGGATGGAACCCCATCGGGGACCTTTaGCCTCGCAGTCGGCGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: WELDAFAARNVGVGSGWNPIGDL*PRSRRS Trigger: ACTGCGCCGACTGCGAGGCCAAAGGTCCCCGATGGG...GTTCCATCCAGAACCGACCCCAACATTCCTCGCTGCAAAGGCATCTAGTTCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027339.14 |
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| CDS-3UTR GCA 90 bp | AAATGGGAACTAGATGCCTTTGCAGCGAGGAATGTTGGGGTCGGTTCTGGATGGGCTTCCAGACCACCCTaGTGTCGTGCTGGGAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: KWELDAFAARNVGVGSGWASRPP*CRAGRL Trigger: CAGCCTCCCAGCACGACAGCAGGGTGGTCTGGAAGC...CCATCCAGAACCGACCCCAACATTCCTCGCTGCAAAGGCATCTAGTTCCCATTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
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| CDS-3UTR TCA 90 bp | AATAAATGGGAACTAGATGCCTTTGCAGCGAGGAATGTTGGGGTCGGTTCTGGACAGCGTCTGCCCCGATaGGCTTCCAGACCACCCTGC | + |
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Preference number: 4 (lower is better) Translates to: NKWELDAFAARNVGVGSGQRLPR*ASRPPC Trigger: GCAGGGTGGTCTGGAAGCTCATCGGGGCAGACGCTG...TCCAGAACCGACCCCAACATTCCTCGCTGCAAAGGCATCTAGTTCCCATTTATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
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| CDS-3UTR GCA 90 bp | AAATGGGAACTAGATGCCTTTGCAGCGAGGAATGTTGGGGTCGGTTCTGGATGGACCACCCTGCTGTCGTaGTGGGAGGCTGGCCAAAAC | + |
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Preference number: 4 (lower is better) Translates to: KWELDAFAARNVGVGSGWTTLLS*WEAGQN Trigger: GTTTTGGCCAGCCTCCCAGCACGACAGCAGGGTGGT...CCATCCAGAACCGACCCCAACATTCCTCGCTGCAAAGGCATCTAGTTCCCATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
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| CDS-3UTR GCA 90 bp | TGGGAACTAGATGCCTTTGCAGCGAGGAATGTTGGGGTCGGTTCTGGATGGAACTGTGTGCTCAGCGTCTaGCCCGATGAGCTTCCAGAC | + |
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Preference number: 4 (lower is better) Translates to: WELDAFAARNVGVGSGWNCVLSV*PDELPD Trigger: GTCTGGAAGCTCATCGGGGCAGACGCTGAGCACACA...GTTCCATCCAGAACCGACCCCAACATTCCTCGCTGCAAAGGCATCTAGTTCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
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| CDS-3UTR GCA 90 bp | TGGGAACTAGATGCCTTTGCAGCGAGGAATGTTGGGGTCGGTTCTGGATGGAACACTTCCACAGCTGTGTaGTCAGCGTCTGCCCCGATG | + |
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Preference number: 4 (lower is better) Translates to: WELDAFAARNVGVGSGWNTSTAV*SASAPM Trigger: CATCGGGGCAGACGCTGAGCACACAGCTGTGGAAGT...GTTCCATCCAGAACCGACCCCAACATTCCTCGCTGCAAAGGCATCTAGTTCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
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| CDS-3UTR CCA 90 bp | AAATGGGAACTAGATGCCTTTGCAGCGAGGAATGTTGGGGTCGGTTCTGGATGGTGGCTGGGTTTCCATTaGTCACGGGTGCCTCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: KWELDAFAARNVGVGSGWWLGFH*SRVPQQ Trigger: CTGCTGAGGCACCCGTGACCAATGGAAACCCAGCCA...CCATCCAGAACCGACCCCAACATTCCTCGCTGCAAAGGCATCTAGTTCCCATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
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| CDS-3UTR TCA 90 bp | TCAGCACAGACCAACACGGTCAATCAGGTCATTCTTAATGTGAGCAAATGGGGGTGTGAGAGGTTCCACTaGGGCTGCTGGGCTTGTGGC | + |
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Preference number: 4 (lower is better) Translates to: SAQTNTVNQVILNVSKWGCERFH*GCWACG Trigger: GCCACAAGCCCAGCAGCCTCAGTGGAACCTCTCACA...CCCCCATTTGCTCACATTAAGAATGACCTGATTGACCGTGTTGGTCTGTGCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027339.14 |
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| CDS-3UTR TCA 90 bp | AATAAATGGGAACTAGATGCCTTTGCAGCGAGGAATGTTGGGGTCGGTTCTGGATGTGAGAGGTTCCACTaGGGCTGCTGGGCTTGTGGC | + |
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Preference number: 4 (lower is better) Translates to: NKWELDAFAARNVGVGSGCERFH*GCWACG Trigger: GCCACAAGCCCAGCAGCCTCAGTGGAACCTCTCACA...TCCAGAACCGACCCCAACATTCCTCGCTGCAAAGGCATCTAGTTCCCATTTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
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| CDS-3UTR TCA 90 bp | TGGGAACTAGATGCCTTTGCAGCGAGGAATGTTGGGGTCGGTTCTGGATGGAACCTGCTGATTCATCTGTaGGAGGTTCCACTGAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: WELDAFAARNVGVGSGWNLLIHL*EVPLRL Trigger: CAGCCTCAGTGGAACCTCTCACAGATGAATCAGCAG...GTTCCATCCAGAACCGACCCCAACATTCCTCGCTGCAAAGGCATCTAGTTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
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| CDS-3UTR CCA 90 bp | TGGGAACTAGATGCCTTTGCAGCGAGGAATGTTGGGGTCGGTTCTGGATGGAACTTGGACAGGATGAGCTaGTGCTGCTCGTTCAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: WELDAFAARNVGVGSGWNLDRMS*CCSFSF Trigger: GAAGCTGAACGAGCAGCACCAGCTCATCCTGTCCAA...GTTCCATCCAGAACCGACCCCAACATTCCTCGCTGCAAAGGCATCTAGTTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027339.14 |
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| CDS-3UTR TCA 90 bp | AAATGGGAACTAGATGCCTTTGCAGCGAGGAATGTTGGGGTCGGTTCTGGATGGGGGCCAACAACATTCTaGGGAAGTGGCATCACTCCA | + |
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Preference number: 4 (lower is better) Translates to: KWELDAFAARNVGVGSGWGPTTF*GSGITP Trigger: TGGAGTGATGCCACTTCCTCAGAATGTTGTTGGCCC...CCATCCAGAACCGACCCCAACATTCCTCGCTGCAAAGGCATCTAGTTCCCATTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
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| CDS-3UTR GCA 90 bp | ATGAATAAATGGGAACTAGATGCCTTTGCAGCGAGGAATGTTGGGGTCGGTTCTAGACAGGGTAGCAGGTaGTGGTACGGAGGCAGTCCC | + |
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Preference number: 4 (lower is better) Translates to: MNKWELDAFAARNVGVGSRQGSR*WYGGSP Trigger: GGGACTGCCTCCGTACCAGCACCTGCTACCCTGTCT...AGAACCGACCCCAACATTCCTCGCTGCAAAGGCATCTAGTTCCCATTTATTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
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| CDS-3UTR GCA 90 bp | AATAAATGGGAACTAGATGCCTTTGCAGCGAGGAATGTTGGGGTCGGTTCTGGAACTTCCACAGCTGTGTaGTCAGCGTCTGCCCCGATG | + |
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Preference number: 4 (lower is better) Translates to: NKWELDAFAARNVGVGSGTSTAV*SASAPM Trigger: CATCGGGGCAGACGCTGAGCACACAGCTGTGGAAGT...TCCAGAACCGACCCCAACATTCCTCGCTGCAAAGGCATCTAGTTCCCATTTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
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| CDS-3UTR CCA 90 bp | TACATGAATAAATGGGAACTAGATGCCTTTGCAGCGAGGAATGTTGGGGTCGGTACCCTGCTGTCGTGCTaGGAGGCTGGCCAAAACCTG | + |
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Preference number: 4 (lower is better) Translates to: YMNKWELDAFAARNVGVGTLLSC*EAGQNL Trigger: CAGGTTTTGGCCAGCCTCCCAGCACGACAGCAGGGT...ACCGACCCCAACATTCCTCGCTGCAAAGGCATCTAGTTCCCATTTATTCATGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
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| CDS-3UTR TCA 90 bp | ATCATACAGTACCTTTCTACAGGATTACTGGCTAATTTGGGGGTGGGGTTTATACAGCGTCTGCCCCGATaGGCTTCCAGACCACCCTGC | + |
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Preference number: 4 (lower is better) Translates to: IIQYLSTGLLANLGVGFIQRLPR*ASRPPC Trigger: GCAGGGTGGTCTGGAAGCTCATCGGGGCAGACGCTG...TATAAACCCCACCCCCAAATTAGCCAGTAATCCTGTAGAAAGGTACTGTATGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027339.14 |
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| CDS-3UTR GCA 90 bp | AAATGGGAACTAGATGCCTTTGCAGCGAGGAATGTTGGGGTCGGTTCTGGATGGAGGCTGGCCAAAACCTaGACTAGCGTTAGCACTACT | + |
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Preference number: 4 (lower is better) Translates to: KWELDAFAARNVGVGSGWRLAKT*TSVSTT Trigger: AGTAGTGCTAACGCTAGTGCAGGTTTTGGCCAGCCT...CCATCCAGAACCGACCCCAACATTCCTCGCTGCAAAGGCATCTAGTTCCCATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
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| CDS-3UTR GCA 90 bp | GTTATGTACATGAATAAATGGGAACTAGATGCCTTTGCAGCGAGGAATGTTGGGGCTTCCAGACCACCCTaGTGTCGTGCTGGGAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: VMYMNKWELDAFAARNVGASRPP*CRAGRL Trigger: CAGCCTCCCAGCACGACAGCAGGGTGGTCTGGAAGC...CCCAACATTCCTCGCTGCAAAGGCATCTAGTTCCCATTTATTCATGTACATAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
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| CDS-3UTR GCA 90 bp | TACATGAATAAATGGGAACTAGATGCCTTTGCAGCGAGGAATGTTGGGGTCGGTTGTGTGCTCAGCGTCTaGCCCGATGAGCTTCCAGAC | + |
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Preference number: 4 (lower is better) Translates to: YMNKWELDAFAARNVGVGCVLSV*PDELPD Trigger: GTCTGGAAGCTCATCGGGGCAGACGCTGAGCACACA...ACCGACCCCAACATTCCTCGCTGCAAAGGCATCTAGTTCCCATTTATTCATGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
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| CDS-3UTR CCA 90 bp | AAATGGGAACTAGATGCCTTTGCAGCGAGGAATGTTGGGGTCGGTTCTGGATGGGCACTGGGACGCCCATaGAAGGAAAACCTTGAAATG | + |
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Preference number: 4 (lower is better) Translates to: KWELDAFAARNVGVGSGWALGRP*KENLEM Trigger: CATTTCAAGGTTTTCCTTCCATGGGCGTCCCAGTGC...CCATCCAGAACCGACCCCAACATTCCTCGCTGCAAAGGCATCTAGTTCCCATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
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| CDS-3UTR CCA 90 bp | TGGGAACTAGATGCCTTTGCAGCGAGGAATGTTGGGGTCGGTTCTGGATGGAACAACATTCTGAGGAAGTaGCATCACTCCAGTCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: WELDAFAARNVGVGSGWNNILRK*HHSSLC Trigger: GCACAGACTGGAGTGATGCCACTTCCTCAGAATGTT...GTTCCATCCAGAACCGACCCCAACATTCCTCGCTGCAAAGGCATCTAGTTCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
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| CDS-3UTR TCA 90 bp | AATAAATGGGAACTAGATGCCTTTGCAGCGAGGAATGTTGGGGTCGGTTCTGGATCTGTGCGTTTCCCATaGACCCATTGTGCATGGGCA | + |
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Preference number: 4 (lower is better) Translates to: NKWELDAFAARNVGVGSGSVRFP*THCAWA Trigger: TGCCCATGCACAATGGGTTCATGGGAAACGCACAGA...TCCAGAACCGACCCCAACATTCCTCGCTGCAAAGGCATCTAGTTCCCATTTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
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| CDS-3UTR GCA 90 bp | GTTATGTACATGAATAAATGGGAACTAGATGCCTTTGCAGCGAGGAATGTTGGGAGACAGGGTAGCAGGTaGTGGTACGGAGGCAGTCCC | + |
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Preference number: 4 (lower is better) Translates to: VMYMNKWELDAFAARNVGRQGSR*WYGGSP Trigger: GGGACTGCCTCCGTACCAGCACCTGCTACCCTGTCT...CCCAACATTCCTCGCTGCAAAGGCATCTAGTTCCCATTTATTCATGTACATAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
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| CDS-3UTR GCA 90 bp | ATGAATAAATGGGAACTAGATGCCTTTGCAGCGAGGAATGTTGGGGTCGGTTCTCCCATGAACCCATTGTaGATGGGCATGCCCACCATC | + |
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Preference number: 4 (lower is better) Translates to: MNKWELDAFAARNVGVGSPMNPL*MGMPTI Trigger: GATGGTGGGCATGCCCATGCACAATGGGTTCATGGG...AGAACCGACCCCAACATTCCTCGCTGCAAAGGCATCTAGTTCCCATTTATTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
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| CDS-3UTR GCA 90 bp | GTTATGTACATGAATAAATGGGAACTAGATGCCTTTGCAGCGAGGAATGTTGGGACCACCCTGCTGTCGTaGTGGGAGGCTGGCCAAAAC | + |
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Preference number: 4 (lower is better) Translates to: VMYMNKWELDAFAARNVGTTLLS*WEAGQN Trigger: GTTTTGGCCAGCCTCCCAGCACGACAGCAGGGTGGT...CCCAACATTCCTCGCTGCAAAGGCATCTAGTTCCCATTTATTCATGTACATAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
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| CDS-3UTR CCA 90 bp | GTTATGTACATGAATAAATGGGAACTAGATGCCTTTGCAGCGAGGAATGTTGGGGTCGTGCTGGGAGGCTaGCCAAAACCTGCACTAGCG | + |
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Preference number: 4 (lower is better) Translates to: VMYMNKWELDAFAARNVGVVLGG*PKPALA Trigger: CGCTAGTGCAGGTTTTGGCCAGCCTCCCAGCACGAC...CCCAACATTCCTCGCTGCAAAGGCATCTAGTTCCCATTTATTCATGTACATAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
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| CDS-3UTR CCA 90 bp | GTTTATCTCCGTTCACTAACCACGTTCCCTGTTAAGCACATCATAACAACAGCAACCCTGCTGTCGTGCTaGGAGGCTGGCCAAAACCTG | + |
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Preference number: 4 (lower is better) Translates to: VYLRSLTTFPVKHIITTATLLSC*EAGQNL Trigger: CAGGTTTTGGCCAGCCTCCCAGCACGACAGCAGGGT...TGCTGTTGTTATGATGTGCTTAACAGGGAACGTGGTTAGTGAACGGAGATAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027339.14 |
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| CDS-3UTR TCA 90 bp | TACATGAATAAATGGGAACTAGATGCCTTTGCAGCGAGGAATGTTGGGGTCGGTTCTGTGCGTTTCCCATaGACCCATTGTGCATGGGCA | + |
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Preference number: 4 (lower is better) Translates to: YMNKWELDAFAARNVGVGSVRFP*THCAWA Trigger: TGCCCATGCACAATGGGTTCATGGGAAACGCACAGA...ACCGACCCCAACATTCCTCGCTGCAAAGGCATCTAGTTCCCATTTATTCATGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
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| CDS-3UTR TCA 90 bp | TACATGAATAAATGGGAACTAGATGCCTTTGCAGCGAGGAATGTTGGGGTCGGTCTGCTGATTCATCTGTaGGAGGTTCCACTGAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: YMNKWELDAFAARNVGVGLLIHL*EVPLRL Trigger: CAGCCTCAGTGGAACCTCTCACAGATGAATCAGCAG...ACCGACCCCAACATTCCTCGCTGCAAAGGCATCTAGTTCCCATTTATTCATGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
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| CDS-3UTR TCA 90 bp | TCAGCACAGACCAACACGGTCAATCAGGTCATTCTTAATGTGAGCAAATGGGGGATGGCAGCCATCTGCTaGTTCATCTGTGAGAGGTTC | + |
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Preference number: 4 (lower is better) Translates to: SAQTNTVNQVILNVSKWGMAAIC*FICERF Trigger: GAACCTCTCACAGATGAATCAGCAGATGGCTGCCAT...CCCCCATTTGCTCACATTAAGAATGACCTGATTGACCGTGTTGGTCTGTGCTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027339.14 |
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| CDS-3UTR TCA 90 bp | AATAAATGGGAACTAGATGCCTTTGCAGCGAGGAATGTTGGGGTCGGTTCTGGAATGGCAGCCATCTGCTaGTTCATCTGTGAGAGGTTC | + |
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Preference number: 4 (lower is better) Translates to: NKWELDAFAARNVGVGSGMAAIC*FICERF Trigger: GAACCTCTCACAGATGAATCAGCAGATGGCTGCCAT...TCCAGAACCGACCCCAACATTCCTCGCTGCAAAGGCATCTAGTTCCCATTTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
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| CDS-3UTR GCA 90 bp | AATAAATGGGAACTAGATGCCTTTGCAGCGAGGAATGTTGGGGTCGGTTCTGGACATTGTGCATGGGCATaGCCACCATCATGCCAGTAT | + |
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Preference number: 4 (lower is better) Translates to: NKWELDAFAARNVGVGSGHCAWA*PPSCQY Trigger: ATACTGGCATGATGGTGGGCATGCCCATGCACAATG...TCCAGAACCGACCCCAACATTCCTCGCTGCAAAGGCATCTAGTTCCCATTTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
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| CDS-3UTR GCA 90 bp | AGTATGAGCAAAGCTGCCCTCCACACAGATGGTTTCTCAACCTGCTTTCACATCAGGCTGGCCAAAACCTaGACTAGCGTTAGCACTACT | + |
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Preference number: 4 (lower is better) Translates to: SMSKAALHTDGFSTCFHIRLAKT*TSVSTT Trigger: AGTAGTGCTAACGCTAGTGCAGGTTTTGGCCAGCCT...GATGTGAAAGCAGGTTGAGAAACCATCTGTGTGGAGGGCAGCTTTGCTCATACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027339.14 |
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| CDS-3UTR CCA 90 bp | GTTATGTACATGAATAAATGGGAACTAGATGCCTTTGCAGCGAGGAATGTTGGGTGGCTGGGTTTCCATTaGTCACGGGTGCCTCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VMYMNKWELDAFAARNVGWLGFH*SRVPQQ Trigger: CTGCTGAGGCACCCGTGACCAATGGAAACCCAGCCA...CCCAACATTCCTCGCTGCAAAGGCATCTAGTTCCCATTTATTCATGTACATAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
||
| CDS-3UTR TCA 90 bp | TCTACAGGATTACTGGCTAATTTGGGGGTGGGGTTTATACTGTTAGAGGTATTATGCTCGTTCAGCTTCTaGGCCTTCTCCCGACAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: STGLLANLGVGFILLEVLCSFSF*AFSRQE Trigger: CTCCTGTCGGGAGAAGGCTCAGAAGCTGAACGAGCA...TAATACCTCTAACAGTATAAACCCCACCCCCAAATTAGCCAGTAATCCTGTAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027339.14 |
||
| CDS-3UTR GCA 90 bp | TGGGAACTAGATGCCTTTGCAGCGAGGAATGTTGGGGTCGGTTCTGGATGGAACTCTGACTTTGTAGTTTaGTCAGTAAACAGATCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: WELDAFAARNVGVGSGWNSDFVV*SVNRSR Trigger: CCTGGATCTGTTTACTGAGCAAACTACAAAGTCAGA...GTTCCATCCAGAACCGACCCCAACATTCCTCGCTGCAAAGGCATCTAGTTCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
||
| CDS-3UTR GCA 90 bp | GTTATGTACATGAATAAATGGGAACTAGATGCCTTTGCAGCGAGGAATGTTGGGCCCATGAACCCATTGTaGATGGGCATGCCCACCATC | + |
|
Preference number: 4 (lower is better) Translates to: VMYMNKWELDAFAARNVGPMNPL*MGMPTI Trigger: GATGGTGGGCATGCCCATGCACAATGGGTTCATGGG...CCCAACATTCCTCGCTGCAAAGGCATCTAGTTCCCATTTATTCATGTACATAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
||
| CDS-3UTR GCA 90 bp | AATAAATGGGAACTAGATGCCTTTGCAGCGAGGAATGTTGGGGTCGGTTCTGGACATCACTCCAGTCTGTaGGTTTCCCATGAACCCATT | + |
|
Preference number: 4 (lower is better) Translates to: NKWELDAFAARNVGVGSGHHSSL*VSHEPI Trigger: AATGGGTTCATGGGAAACGCACAGACTGGAGTGATG...TCCAGAACCGACCCCAACATTCCTCGCTGCAAAGGCATCTAGTTCCCATTTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
||
| CDS-3UTR CCA 90 bp | GTTATGTACATGAATAAATGGGAACTAGATGCCTTTGCAGCGAGGAATGTTGGGAGGCTGCTGGGCTTGTaGCAAGCCGAACTTACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VMYMNKWELDAFAARNVGRLLGL*QAELTL Trigger: CAGAGTAAGTTCGGCTTGCCACAAGCCCAGCAGCCT...CCCAACATTCCTCGCTGCAAAGGCATCTAGTTCCCATTTATTCATGTACATAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
||
| CDS-3UTR TCA 90 bp | AAATGGGAACTAGATGCCTTTGCAGCGAGGAATGTTGGGGTCGGTTCTGGATGGCTTTGCTACTTCTTCTaGCTTTGTAGTTTGCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KWELDAFAARNVGVGSGWLCYFF*LCSLLS Trigger: ACTGAGCAAACTACAAAGTCAGAAGAAGTAGCAAAG...CCATCCAGAACCGACCCCAACATTCCTCGCTGCAAAGGCATCTAGTTCCCATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
||
| CDS-3UTR TCA 90 bp | CAGTACCTTTCTACAGGATTACTGGCTAATTTGGGGGTGGGGTTTATACTGTTAGGGCCAACAACATTCTaGGGAAGTGGCATCACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QYLSTGLLANLGVGFILLGPTTF*GSGITP Trigger: TGGAGTGATGCCACTTCCTCAGAATGTTGTTGGCCC...TAACAGTATAAACCCCACCCCCAAATTAGCCAGTAATCCTGTAGAAAGGTACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027339.14 |
||
| CDS-3UTR GCA 90 bp | TACATGAATAAATGGGAACTAGATGCCTTTGCAGCGAGGAATGTTGGGGTCGGTCATCACTCCAGTCTGTaGGTTTCCCATGAACCCATT | + |
|
Preference number: 4 (lower is better) Translates to: YMNKWELDAFAARNVGVGHHSSL*VSHEPI Trigger: AATGGGTTCATGGGAAACGCACAGACTGGAGTGATG...ACCGACCCCAACATTCCTCGCTGCAAAGGCATCTAGTTCCCATTTATTCATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
||
| CDS-3UTR GCA 90 bp | ATGAATAAATGGGAACTAGATGCCTTTGCAGCGAGGAATGTTGGGGTCGGTTCTGAACTTACTCTGTGGTaGACCCATTTGTCCCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: MNKWELDAFAARNVGVGSELTLW*THLSHH Trigger: ATGGTGGGACAAATGGGTGCACCACAGAGTAAGTTC...AGAACCGACCCCAACATTCCTCGCTGCAAAGGCATCTAGTTCCCATTTATTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
||
| CDS-3UTR CCA 90 bp | GTTATGTACATGAATAAATGGGAACTAGATGCCTTTGCAGCGAGGAATGTTGGGGCCGAACTTACTCTGTaGTGCACCCATTTGTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VMYMNKWELDAFAARNVGAELTL*CTHLSH Trigger: GTGGGACAAATGGGTGCACCACAGAGTAAGTTCGGC...CCCAACATTCCTCGCTGCAAAGGCATCTAGTTCCCATTTATTCATGTACATAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
||
| CDS-3UTR GCA 90 bp | GTTATGTACATGAATAAATGGGAACTAGATGCCTTTGCAGCGAGGAATGTTGGGGCATGCCCACCATCATaGCAGTATTCTGTCCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: VMYMNKWELDAFAARNVGACPPS*QYSVPS Trigger: TGATGGGACAGAATACTGGCATGATGGTGGGCATGC...CCCAACATTCCTCGCTGCAAAGGCATCTAGTTCCCATTTATTCATGTACATAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
||
| CDS-3UTR CCA 90 bp | CAGTACCTTTCTACAGGATTACTGGCTAATTTGGGGGTGGGGTTTATACTGTTAGCACTGGGACGCCCATaGAAGGAAAACCTTGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: QYLSTGLLANLGVGFILLALGRP*KENLEM Trigger: CATTTCAAGGTTTTCCTTCCATGGGCGTCCCAGTGC...TAACAGTATAAACCCCACCCCCAAATTAGCCAGTAATCCTGTAGAAAGGTACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027339.14 |
||
| CDS-3UTR TCA 90 bp | TCAGCACAGACCAACACGGTCAATCAGGTCATTCTTAATGTGAGCAAATGGGGGCTTTGCTACTTCTTCTaGCTTTGTAGTTTGCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SAQTNTVNQVILNVSKWGLCYFF*LCSLLS Trigger: ACTGAGCAAACTACAAAGTCAGAAGAAGTAGCAAAG...CCCCCATTTGCTCACATTAAGAATGACCTGATTGACCGTGTTGGTCTGTGCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027339.14 |
||
| CDS-3UTR TCA 90 bp | TACATGAATAAATGGGAACTAGATGCCTTTGCAGCGAGGAATGTTGGGGTCGGTTGCAGTCGGTGCTTGTaGGGTAAATGGTATATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: YMNKWELDAFAARNVGVGCSRCL*GKWYIC Trigger: ACAAATATACCATTTACCTCACAAGCACCGACTGCA...ACCGACCCCAACATTCCTCGCTGCAAAGGCATCTAGTTCCCATTTATTCATGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
||
| CDS-3UTR GCA 90 bp | GTTATGTACATGAATAAATGGGAACTAGATGCCTTTGCAGCGAGGAATGTTGGGAGGAGTGCTTTGCTGTaGTCCTGTACCATACAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VMYMNKWELDAFAARNVGRSALL*SCTIQR Trigger: TCTCTGTATGGTACAGGAGCACAGCAAAGCACTCCT...CCCAACATTCCTCGCTGCAAAGGCATCTAGTTCCCATTTATTCATGTACATAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
||
| CDS-3UTR GCA 90 bp | TCTACAGGATTACTGGCTAATTTGGGGGTGGGGTTTATACTGTTAGAGGTATTAGCATGCCCACCATCATaGCAGTATTCTGTCCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: STGLLANLGVGFILLEVLACPPS*QYSVPS Trigger: TGATGGGACAGAATACTGGCATGATGGTGGGCATGC...TAATACCTCTAACAGTATAAACCCCACCCCCAAATTAGCCAGTAATCCTGTAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027339.14 |
||
| CDS-3UTR GCA 90 bp | CAGTACCTTTCTACAGGATTACTGGCTAATTTGGGGGTGGGGTTTATACTGTTAGAACTTACTCTGTGGTaGACCCATTTGTCCCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: QYLSTGLLANLGVGFILLELTLW*THLSHH Trigger: ATGGTGGGACAAATGGGTGCACCACAGAGTAAGTTC...TAACAGTATAAACCCCACCCCCAAATTAGCCAGTAATCCTGTAGAAAGGTACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027339.14 |
||
| CDS-3UTR CCA 90 bp | GTTTATCTCCGTTCACTAACCACGTTCCCTGTTAAGCACATCATAACAACAGCAAACATTCTGAGGAAGTaGCATCACTCCAGTCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VYLRSLTTFPVKHIITTANILRK*HHSSLC Trigger: GCACAGACTGGAGTGATGCCACTTCCTCAGAATGTT...TGCTGTTGTTATGATGTGCTTAACAGGGAACGTGGTTAGTGAACGGAGATAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027339.14 |
||
| CDS-3UTR TCA 90 bp | GGCACCATAAAATGTAAACACAATTACTGTCATAAACCTGGATATACCTTCAAGGCAGTTTGGACAGGATaGGCTGGTGCTGCTCGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GTIKCKHNYCHKPGYTFKAVWTG*AGAARS Trigger: TGAACGAGCAGCACCAGCTCATCCTGTCCAAACTGC...CTTGAAGGTATATCCAGGTTTATGACAGTAATTGTGTTTACATTTTATGGTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027339.14 |
||
| CDS-3UTR CCA 90 bp | GGCACCATAAAATGTAAACACAATTACTGTCATAAACCTGGATATACCTTCAAGAGGCTGCTGGGCTTGTaGCAAGCCGAACTTACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GTIKCKHNYCHKPGYTFKRLLGL*QAELTL Trigger: CAGAGTAAGTTCGGCTTGCCACAAGCCCAGCAGCCT...CTTGAAGGTATATCCAGGTTTATGACAGTAATTGTGTTTACATTTTATGGTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027339.14 |
||
| CDS-3UTR CCA 90 bp | TCTACAGGATTACTGGCTAATTTGGGGGTGGGGTTTATACTGTTAGAGGTATTATGTTCTGGTGTCCATTaGTCTAGGTTGACTGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: STGLLANLGVGFILLEVLCSGVH*SRLTDL Trigger: CAAGTCAGTCAACCTAGACCAATGGACACCAGAACA...TAATACCTCTAACAGTATAAACCCCACCCCCAAATTAGCCAGTAATCCTGTAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027339.14 |
||
| CDS-3UTR CCA 90 bp | TACATGAATAAATGGGAACTAGATGCCTTTGCAGCGAGGAATGTTGGGGTCGGTCATACAGAGATAAGATaGAGTCTTTGGAGAGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: YMNKWELDAFAARNVGVGHTEIR*SLWRVV Trigger: AACAACTCTCCAAAGACTCCATCTTATCTCTGTATG...ACCGACCCCAACATTCCTCGCTGCAAAGGCATCTAGTTCCCATTTATTCATGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
||
| CDS-3UTR GCA 90 bp | CAGTACCTTTCTACAGGATTACTGGCTAATTTGGGGGTGGGGTTTATACTGTTAGTATTTCCCATATCTTaGATGCACTGTATCTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QYLSTGLLANLGVGFILLVFPIS*MHCICS Trigger: AGAACAGATACAGTGCATGCAAGATATGGGAAATAC...TAACAGTATAAACCCCACCCCCAAATTAGCCAGTAATCCTGTAGAAAGGTACTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027339.14 |
||
| CDS-3UTR CCA 90 bp | CAGTACCTTTCTACAGGATTACTGGCTAATTTGGGGGTGGGGTTTATACTGTTACATACAGAGATAAGATaGAGTCTTTGGAGAGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QYLSTGLLANLGVGFILLHTEIR*SLWRVV Trigger: AACAACTCTCCAAAGACTCCATCTTATCTCTGTATG...TAACAGTATAAACCCCACCCCCAAATTAGCCAGTAATCCTGTAGAAAGGTACTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027339.14 |
||
| 3UTR CAA 72 bp | ATCATACAGTACCTTTCTACAGGATTACTGGCTAATTaGGGGGTGGGGTTTATACTGTTAGAGGTATTACTA | + |
|
Preference number: 4 (lower is better) Translates to: IIQYLSTGLLAN*GVGFILLEVLL Trigger: TAGTAATACCTCTAACAGTATAAACCCCACCCCCAAATTAGCCAGTAATCCTGTAGAAAGGTACTGTATGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027339.14 |
||
| CDS-3UTR CAA 90 bp | TGGGAACTAGATGCCTTTGCAGCGAGGAATGTTGGGGTCGGTTCTGGATGGAACGCCCATCGGGGACCTTaGGCCTCGCAGTCGGCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: WELDAFAARNVGVGSGWNAHRGP*ASQSAQ Trigger: CTGCGCCGACTGCGAGGCCAAAGGTCCCCGATGGGC...GTTCCATCCAGAACCGACCCCAACATTCCTCGCTGCAAAGGCATCTAGTTCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027339.14 |
||
| CDS TCA 90 bp | CGGCGCAGTACTTGTTGTCCTCCTCCCTCAGCAGTTTGGACAGGATaGGCTGGTGCTGCTCGTTCAGCTTCTGAGCCTTCTCCCGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: RRSTCCPPPSAVWTG*AGAARSASEPSPDR Trigger: CCTGTCGGGAGAAGGCTCAGAAGCTGAACGAGCAGCACCAGCTCATCCTGTCCAAACTGCTGAGGGAGGAGGACAACAAGTACTGCGCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027339.14 |
||
| CDS CCA 90 bp | TGCCCCGATGAGCTTCCAGACCACCCTGCTGTCGTGCTGGGAGGCTaGCCAAAACCTGCACTAGCGTTAGCACTACTGAGGTTCATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: CPDELPDHPAVVLGG*PKPALALALLRFMA Trigger: TGCCATGAACCTCAGTAGTGCTAACGCTAGTGCAGGTTTTGGCCAGCCTCCCAGCACGACAGCAGGGTGGTCTGGAAGCTCATCGGGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
||
| CDS CCA 90 bp | TGGTCCAAAAATGTCCAGATCATCACTCAGGGCTGGCGCTGTGGCTaGGTTTCCATTGGTCACGGGTGCCTCAGCAGGACCATCAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: WSKNVQIITQGWRCG*VSIGHGCLSRTIKS Trigger: GGACTTGATGGTCCTGCTGAGGCACCCGTGACCAATGGAAACCCAGCCACAGCGCCAGCCCTGAGTGATGATCTGGACATTTTTGGACCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
||
| CDS CCA 90 bp | TGTCCAGATCATCACTCAGGGCTGGCGCTGTGGCTGGGTTTCCATTaGTCACGGGTGCCTCAGCAGGACCATCAAGTCCTAGAAGATCAA | + |
|
Preference number: 5 (lower is better) Translates to: CPDHHSGLALWLGFH*SRVPQQDHQVLEDQ Trigger: TTGATCTTCTAGGACTTGATGGTCCTGCTGAGGCACCCGTGACCAATGGAAACCCAGCCACAGCGCCAGCCCTGAGTGATGATCTGGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
||
| CDS CCA 90 bp | TCATTGGTCCAAAAATGTCCAGATCATCACTCAGGGCTGGCGCTGTaGCTGGGTTTCCATTGGTCACGGGTGCCTCAGCAGGACCATCAA | + |
|
Preference number: 5 (lower is better) Translates to: SLVQKCPDHHSGLAL*LGFHWSRVPQQDHQ Trigger: TTGATGGTCCTGCTGAGGCACCCGTGACCAATGGAAACCCAGCCACAGCGCCAGCCCTGAGTGATGATCTGGACATTTTTGGACCAATGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
||
| CDS TCA 90 bp | GTTAGCACTACTGAGGTTCATGGCAGCCATCTGCTGATTCATCTGTaGGAGGTTCCACTGAGGCTGCTGGGCTTGTGGCAAGCCGAACTT | + |
|
Preference number: 5 (lower is better) Translates to: VSTTEVHGSHLLIHL*EVPLRLLGLWQAEL Trigger: AAGTTCGGCTTGCCACAAGCCCAGCAGCCTCAGTGGAACCTCTCACAGATGAATCAGCAGATGGCTGCCATGAACCTCAGTAGTGCTAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
||
| CDS GCA 90 bp | CTGAGGGCCAACAACATTCTGAGGAAGTGGCATCACTCCAGTCTGTaGGTTTCCCATGAACCCATTGTGCATGGGCATGCCCACCATCAT | + |
|
Preference number: 5 (lower is better) Translates to: LRANNILRKWHHSSL*VSHEPIVHGHAHHH Trigger: ATGATGGTGGGCATGCCCATGCACAATGGGTTCATGGGAAACGCACAGACTGGAGTGATGCCACTTCCTCAGAATGTTGTTGGCCCTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
||
| CDS CCA 90 bp | GTTAGAAATCATTGGTCCAAAAATGTCCAGATCATCACTCAGGGCTaGCGCTGTGGCTGGGTTTCCATTGGTCACGGGTGCCTCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VRNHWSKNVQIITQG*RCGWVSIGHGCLSR Trigger: CCTGCTGAGGCACCCGTGACCAATGGAAACCCAGCCACAGCGCCAGCCCTGAGTGATGATCTGGACATTTTTGGACCAATGATTTCTAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
||
| CDS-3UTR CAA 90 bp | AAATGGGAACTAGATGCCTTTGCAGCGAGGAATGTTGGGGTCGGTTCTGGATGGTTTCCCATGAACCCATaGTGCATGGGCATGCCCACC | + |
|
Preference number: 5 (lower is better) Translates to: KWELDAFAARNVGVGSGWFPMNP*CMGMPT Trigger: GGTGGGCATGCCCATGCACAATGGGTTCATGGGAAA...CCATCCAGAACCGACCCCAACATTCCTCGCTGCAAAGGCATCTAGTTCCCATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
||
| CDS GCA 90 bp | GGAAGTGGCATCACTCCAGTCTGTGCGTTTCCCATGAACCCATTGTaGATGGGCATGCCCACCATCATGCCAGTATTCTGTCCCATCATA | + |
|
Preference number: 5 (lower is better) Translates to: GSGITPVCAFPMNPL*MGMPTIMPVFCPII Trigger: TATGATGGGACAGAATACTGGCATGATGGTGGGCATGCCCATGCACAATGGGTTCATGGGAAACGCACAGACTGGAGTGATGCCACTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
||
| CDS CCA 90 bp | TTGTCCCACCATTCCTCCCTGAGGGCCAACAACATTCTGAGGAAGTaGCATCACTCCAGTCTGTGCGTTTCCCATGAACCCATTGTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: LSHHSSLRANNILRK*HHSSLCVSHEPIVH Trigger: ATGCACAATGGGTTCATGGGAAACGCACAGACTGGAGTGATGCCACTTCCTCAGAATGTTGTTGGCCCTCAGGGAGGAATGGTGGGACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
||
| CDS-3UTR CAA 90 bp | TCAGCACAGACCAACACGGTCAATCAGGTCATTCTTAATGTGAGCAAATGGGGGTCCTCCCTCAGCAGTTaGGACAGGATGAGCTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SAQTNTVNQVILNVSKWGSSLSS*DRMSWC Trigger: GCACCAGCTCATCCTGTCCAAACTGCTGAGGGAGGA...CCCCCATTTGCTCACATTAAGAATGACCTGATTGACCGTGTTGGTCTGTGCTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027339.14 |
||
| CDS-3UTR CAA 90 bp | TGGGAACTAGATGCCTTTGCAGCGAGGAATGTTGGGGTCGGTTCTGGATGGAACCCGTTGTTAGTGGTTTaGCAGGCTTTTCTGGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: WELDAFAARNVGVGSGWNPLLVV*QAFLAP Trigger: AGGAGCCAGAAAAGCCTGCAAAACCACTAACAACGG...GTTCCATCCAGAACCGACCCCAACATTCCTCGCTGCAAAGGCATCTAGTTCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
||
| CDS-3UTR CAA 90 bp | AAATGGGAACTAGATGCCTTTGCAGCGAGGAATGTTGGGGTCGGTTCTGGATGGCACACCAGGAGTGCTTaGCTGTGCTCCTGTACCATA | + |
|
Preference number: 5 (lower is better) Translates to: KWELDAFAARNVGVGSGWHTRSA*LCSCTI Trigger: TATGGTACAGGAGCACAGCAAAGCACTCCTGGTGTG...CCATCCAGAACCGACCCCAACATTCCTCGCTGCAAAGGCATCTAGTTCCCATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
||
| CDS CCA 90 bp | ATTCTGTCCCATCATATTTCCTATAAGACCGGGAGCTGCAGGCACTaGGACGCCCATGGAAGGAAAACCTTGAAATGCAGTCGGTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ILSHHISYKTGSCRH*DAHGRKTLKCSRCL Trigger: CAAGCACCGACTGCATTTCAAGGTTTTCCTTCCATGGGCGTCCCAGTGCCTGCAGCTCCCGGTCTTATAGGAAATATGATGGGACAGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
||
| CDS-3UTR CAA 90 bp | TCCCAATGTGGCTTAGGACATCATGGGGAGTATGAGCAAAGCTGCCCTCCACACCATGGAAGGAAAACCTaGAAATGCAGTCGGTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SQCGLGHHGEYEQSCPPHHGRKT*KCSRCL Trigger: CAAGCACCGACTGCATTTCAAGGTTTTCCTTCCATG...GTGTGGAGGGCAGCTTTGCTCATACTCCCCATGATGTCCTAAGCCACATTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027339.14 |
||
| CDS-3UTR CAA 90 bp | TACATGAATAAATGGGAACTAGATGCCTTTGCAGCGAGGAATGTTGGGGTCGGTCTGTGGTGCACCCATTaGTCCCACCATTCCTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: YMNKWELDAFAARNVGVGLWCTH*SHHSSL Trigger: CAGGGAGGAATGGTGGGACAAATGGGTGCACCACAG...ACCGACCCCAACATTCCTCGCTGCAAAGGCATCTAGTTCCCATTTATTCATGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
||
| CDS-3UTR CAA 90 bp | CAGTACCTTTCTACAGGATTACTGGCTAATTTGGGGGTGGGGTTTATACTGTTATCGGCGCAGTACTTGTaGTCCTCCTCCCTCAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: QYLSTGLLANLGVGFILLSAQYL*SSSLSS Trigger: ACTGCTGAGGGAGGAGGACAACAAGTACTGCGCCGA...TAACAGTATAAACCCCACCCCCAAATTAGCCAGTAATCCTGTAGAAAGGTACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027339.14 |
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| CDS-3UTR CAA 90 bp | ATCATACAGTACCTTTCTACAGGATTACTGGCTAATTTGGGGGTGGGGTTTATACAGTCGGCGCAGTACTaGTTGTCCTCCTCCCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: IIQYLSTGLLANLGVGFIQSAQY*LSSSLS Trigger: GCTGAGGGAGGAGGACAACAAGTACTGCGCCGACTG...TATAAACCCCACCCCCAAATTAGCCAGTAATCCTGTAGAAAGGTACTGTATGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027339.14 |
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| CDS-3UTR CAA 90 bp | TCAGCACAGACCAACACGGTCAATCAGGTCATTCTTAATGTGAGCAAATGGGGGCCGTTGTTAGTGGTTTaGCAGGCTTTTCTGGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SAQTNTVNQVILNVSKWGPLLVV*QAFLAP Trigger: AGGAGCCAGAAAAGCCTGCAAAACCACTAACAACGG...CCCCCATTTGCTCACATTAAGAATGACCTGATTGACCGTGTTGGTCTGTGCTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027339.14 |
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| CDS-3UTR CAA 90 bp | TGGGAACTAGATGCCTTTGCAGCGAGGAATGTTGGGGTCGGTTCTGGATGGAACGGAGTCTTTGGAGAGTaGTTTCTTTGCTACTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: WELDAFAARNVGVGSGWNGVFGE*FLCYFF Trigger: GAAGAAGTAGCAAAGAAACAACTCTCCAAAGACTCC...GTTCCATCCAGAACCGACCCCAACATTCCTCGCTGCAAAGGCATCTAGTTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
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| CDS-3UTR CAA 90 bp | GTTTATCTCCGTTCACTAACCACGTTCCCTGTTAAGCACATCATAACAACAGCACTGTGGTGCACCCATTaGTCCCACCATTCCTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: VYLRSLTTFPVKHIITTALWCTH*SHHSSL Trigger: CAGGGAGGAATGGTGGGACAAATGGGTGCACCACAG...TGCTGTTGTTATGATGTGCTTAACAGGGAACGTGGTTAGTGAACGGAGATAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027339.14 |
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| CDS TCA 90 bp | TGGGACGCCCATGGAAGGAAAACCTTGAAATGCAGTCGGTGCTTGTaGGGTAAATGGTATATTTGTGGGTCCCATAAACACACCAGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: WDAHGRKTLKCSRCL*GKWYICGSHKHTRS Trigger: ACTCCTGGTGTGTTTATGGGACCCACAAATATACCATTTACCTCACAAGCACCGACTGCATTTCAAGGTTTTCCTTCCATGGGCGTCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
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| CDS-3UTR CAA 90 bp | AAATGGGAACTAGATGCCTTTGCAGCGAGGAATGTTGGGGTCGGTTCTGGATGGTTTCTTAGGCTCAAGTaGTTGCTCTTCTTTCTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: KWELDAFAARNVGVGSGWFLRLK*LLFFLR Trigger: CCGAAGAAAGAAGAGCAACAACTTGAGCCTAAGAAA...CCATCCAGAACCGACCCCAACATTCCTCGCTGCAAAGGCATCTAGTTCCCATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
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| CDS-3UTR CAA 90 bp | TGGGAACTAGATGCCTTTGCAGCGAGGAATGTTGGGGTCGGTTCTGGATGGAACGATAAGATGGAGTCTTaGGAGAGTTGTTTCTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: WELDAFAARNVGVGSGWNDKMES*ESCFFA Trigger: AGCAAAGAAACAACTCTCCAAAGACTCCATCTTATC...GTTCCATCCAGAACCGACCCCAACATTCCTCGCTGCAAAGGCATCTAGTTCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
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| CDS-3UTR CAA 90 bp | GTTTATCTCCGTTCACTAACCACGTTCCCTGTTAAGCACATCATAACAACAGCATTTCCCATGAACCCATaGTGCATGGGCATGCCCACC | + |
|
Preference number: 5 (lower is better) Translates to: VYLRSLTTFPVKHIITTAFPMNP*CMGMPT Trigger: GGTGGGCATGCCCATGCACAATGGGTTCATGGGAAA...TGCTGTTGTTATGATGTGCTTAACAGGGAACGTGGTTAGTGAACGGAGATAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027339.14 |
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| CDS-3UTR CAA 90 bp | AATAAATGGGAACTAGATGCCTTTGCAGCGAGGAATGTTGGGGTCGGTTCTGGAGAAAAACTCTACTGCTaGATCTGTCTGTGGTCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: NKWELDAFAARNVGVGSGEKLYC*ICLWSS Trigger: CGAAGACCACAGACAGATCAAGCAGTAGAGTTTTTC...TCCAGAACCGACCCCAACATTCCTCGCTGCAAAGGCATCTAGTTCCCATTTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
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| CDS-3UTR CAA 90 bp | GTTATGTACATGAATAAATGGGAACTAGATGCCTTTGCAGCGAGGAATGTTGGGCACACCAGGAGTGCTTaGCTGTGCTCCTGTACCATA | + |
|
Preference number: 5 (lower is better) Translates to: VMYMNKWELDAFAARNVGHTRSA*LCSCTI Trigger: TATGGTACAGGAGCACAGCAAAGCACTCCTGGTGTG...CCCAACATTCCTCGCTGCAAAGGCATCTAGTTCCCATTTATTCATGTACATAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
||
| CDS-3UTR CAA 90 bp | AGTATGAGCAAAGCTGCCCTCCACACAGATGGTTTCTCAACCTGCTTTCACATCGGAGTCTTTGGAGAGTaGTTTCTTTGCTACTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SMSKAALHTDGFSTCFHIGVFGE*FLCYFF Trigger: GAAGAAGTAGCAAAGAAACAACTCTCCAAAGACTCC...GATGTGAAAGCAGGTTGAGAAACCATCTGTGTGGAGGGCAGCTTTGCTCATACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027339.14 |
||
| CDS-3UTR CAA 90 bp | GTTTATCTCCGTTCACTAACCACGTTCCCTGTTAAGCACATCATAACAACAGCAGTCCATTGGTCTAGGTaGACTGACTTGACTCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: VYLRSLTTFPVKHIITTAVHWSR*TDLTLD Trigger: ATCCAGAGTCAAGTCAGTCAACCTAGACCAATGGAC...TGCTGTTGTTATGATGTGCTTAACAGGGAACGTGGTTAGTGAACGGAGATAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027339.14 |
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| CDS-3UTR CAA 90 bp | TCAGCACAGACCAACACGGTCAATCAGGTCATTCTTAATGTGAGCAAATGGGGGAGTATTTCCCATATCTaGCATGCACTGTATCTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SAQTNTVNQVILNVSKWGSISHI*HALYLF Trigger: GAACAGATACAGTGCATGCAAGATATGGGAAATACT...CCCCCATTTGCTCACATTAAGAATGACCTGATTGACCGTGTTGGTCTGTGCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027339.14 |
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| CDS-3UTR CAA 90 bp | GTTATGTACATGAATAAATGGGAACTAGATGCCTTTGCAGCGAGGAATGTTGGGCATGGAAGGAAAACCTaGAAATGCAGTCGGTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VMYMNKWELDAFAARNVGHGRKT*KCSRCL Trigger: CAAGCACCGACTGCATTTCAAGGTTTTCCTTCCATG...CCCAACATTCCTCGCTGCAAAGGCATCTAGTTCCCATTTATTCATGTACATAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
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| CDS-3UTR CAA 90 bp | GTTATGTACATGAATAAATGGGAACTAGATGCCTTTGCAGCGAGGAATGTTGGGGAAAAACTCTACTGCTaGATCTGTCTGTGGTCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: VMYMNKWELDAFAARNVGEKLYC*ICLWSS Trigger: CGAAGACCACAGACAGATCAAGCAGTAGAGTTTTTC...CCCAACATTCCTCGCTGCAAAGGCATCTAGTTCCCATTTATTCATGTACATAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
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| CDS-3UTR CAA 90 bp | ATCATACAGTACCTTTCTACAGGATTACTGGCTAATTTGGGGGTGGGGTTTATATTTCTTAGGCTCAAGTaGTTGCTCTTCTTTCTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: IIQYLSTGLLANLGVGFIFLRLK*LLFFLR Trigger: CCGAAGAAAGAAGAGCAACAACTTGAGCCTAAGAAA...TATAAACCCCACCCCCAAATTAGCCAGTAATCCTGTAGAAAGGTACTGTATGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027339.14 |
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| CDS TCA 72 bp | GACAGGGTAGCAGGTGCTGGTACGGAGGCAGTCCCCTaGGCCGGGGGCATGACAGCTGCAGGTAAAGGGTTA | + |
|
Preference number: 6 (lower is better) Translates to: DRVAGAGTEAVP*AGGMTAAGKGL Trigger: TAACCCTTTACCTGCAGCTGTCATGCCCCCGGCTCAGGGGACTGCCTCCGTACCAGCACCTGCTACCCTGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
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| CDS CAA 90 bp | GAAGCCCATCGGGGACCTTTGGCCTCGCAGTCGGCGCAGTACTTGTaGTCCTCCTCCCTCAGCAGTTTGGACAGGATGAGCTGGTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: EAHRGPLASQSAQYL*SSSLSSLDRMSWCC Trigger: GCAGCACCAGCTCATCCTGTCCAAACTGCTGAGGGAGGAGGACAACAAGTACTGCGCCGACTGCGAGGCCAAAGGTCCCCGATGGGCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027339.14 |
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| CDS CAA 90 bp | CAGGAAGCCCATCGGGGACCTTTGGCCTCGCAGTCGGCGCAGTACTaGTTGTCCTCCTCCCTCAGCAGTTTGGACAGGATGAGCTGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: QEAHRGPLASQSAQY*LSSSLSSLDRMSWC Trigger: GCACCAGCTCATCCTGTCCAAACTGCTGAGGGAGGAGGACAACAAGTACTGCGCCGACTGCGAGGCCAAAGGTCCCCGATGGGCTTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027339.14 |
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| CDS CAA 72 bp | CGGGGACCTTTGGCCTCGCAGTCGGCGCAGTACTTGTaGTCCTCCTCCCTCAGCAGTTTGGACAGGATGAGC | + |
|
Preference number: 6 (lower is better) Translates to: RGPLASQSAQYL*SSSLSSLDRMS Trigger: GCTCATCCTGTCCAAACTGCTGAGGGAGGAGGACAACAAGTACTGCGCCGACTGCGAGGCCAAAGGTCCCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027339.14 |
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| CDS GCA 72 bp | CTGCTGGGCTTGTGGCAAGCCGAACTTACTCTGTGGTaGACCCATTTGTCCCACCATTCCTCCCTGAGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LLGLWQAELTLW*THLSHHSSLRA Trigger: GGCCCTCAGGGAGGAATGGTGGGACAAATGGGTGCACCACAGAGTAAGTTCGGCTTGCCACAAGCCCAGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
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| CDS CCA 72 bp | CATCACTCAGGGCTGGCGCTGTGGCTGGGTTTCCATTaGTCACGGGTGCCTCAGCAGGACCATCAAGTCCTA | + |
|
Preference number: 6 (lower is better) Translates to: HHSGLALWLGFH*SRVPQQDHQVL Trigger: TAGGACTTGATGGTCCTGCTGAGGCACCCGTGACCAATGGAAACCCAGCCACAGCGCCAGCCCTGAGTGATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
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| CDS CCA 72 bp | AATGTCCAGATCATCACTCAGGGCTGGCGCTGTGGCTaGGTTTCCATTGGTCACGGGTGCCTCAGCAGGACC | + |
|
Preference number: 6 (lower is better) Translates to: NVQIITQGWRCG*VSIGHGCLSRT Trigger: GGTCCTGCTGAGGCACCCGTGACCAATGGAAACCCAGCCACAGCGCCAGCCCTGAGTGATGATCTGGACATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
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| CDS CCA 72 bp | GAGCTTCCAGACCACCCTGCTGTCGTGCTGGGAGGCTaGCCAAAACCTGCACTAGCGTTAGCACTACTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: ELPDHPAVVLGG*PKPALALALLR Trigger: CCTCAGTAGTGCTAACGCTAGTGCAGGTTTTGGCCAGCCTCCCAGCACGACAGCAGGGTGGTCTGGAAGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
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| CDS CAA 72 bp | CATCGGGGACCTTTGGCCTCGCAGTCGGCGCAGTACTaGTTGTCCTCCTCCCTCAGCAGTTTGGACAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: HRGPLASQSAQY*LSSSLSSLDRM Trigger: CATCCTGTCCAAACTGCTGAGGGAGGAGGACAACAAGTACTGCGCCGACTGCGAGGCCAAAGGTCCCCGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027339.14 |
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| CDS CAA 72 bp | TCATCACTCAGGGCTGGCGCTGTGGCTGGGTTTCCATaGGTCACGGGTGCCTCAGCAGGACCATCAAGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SSLRAGAVAGFP*VTGASAGPSSP Trigger: AGGACTTGATGGTCCTGCTGAGGCACCCGTGACCAATGGAAACCCAGCCACAGCGCCAGCCCTGAGTGATGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
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| CDS CCA 72 bp | AGGCTGCTGGGCTTGTGGCAAGCCGAACTTACTCTGTaGTGCACCCATTTGTCCCACCATTCCTCCCTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: RLLGLWQAELTL*CTHLSHHSSLR Trigger: CCTCAGGGAGGAATGGTGGGACAAATGGGTGCACCACAGAGTAAGTTCGGCTTGCCACAAGCCCAGCAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
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| CDS CCA 72 bp | CAAAAATGTCCAGATCATCACTCAGGGCTGGCGCTGTaGCTGGGTTTCCATTGGTCACGGGTGCCTCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: QKCPDHHSGLAL*LGFHWSRVPQQ Trigger: CTGCTGAGGCACCCGTGACCAATGGAAACCCAGCCACAGCGCCAGCCCTGAGTGATGATCTGGACATTTTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
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| CDS CAA 72 bp | TCGGCGCAGTACTTGTTGTCCTCCTCCCTCAGCAGTTaGGACAGGATGAGCTGGTGCTGCTCGTTCAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SAQYLLSSSLSS*DRMSWCCSFSF Trigger: GAAGCTGAACGAGCAGCACCAGCTCATCCTGTCCAAACTGCTGAGGGAGGAGGACAACAAGTACTGCGCCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027339.14 |
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| CDS CAA 90 bp | ATGTCCAGATCATCACTCAGGGCTGGCGCTGTGGCTGGGTTTCCATaGGTCACGGGTGCCTCAGCAGGACCATCAAGTCCTAGAAGATCA | + |
|
Preference number: 6 (lower is better) Translates to: MSRSSLRAGAVAGFP*VTGASAGPSSPRRS Trigger: TGATCTTCTAGGACTTGATGGTCCTGCTGAGGCACCCGTGACCAATGGAAACCCAGCCACAGCGCCAGCCCTGAGTGATGATCTGGACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
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| CDS CAA 90 bp | CTGCTGGGCTTGTGGCAAGCCGAACTTACTCTGTGGTGCACCCATTaGTCCCACCATTCCTCCCTGAGGGCCAACAACATTCTGAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LLGLWQAELTLWCTH*SHHSSLRANNILRK Trigger: CTTCCTCAGAATGTTGTTGGCCCTCAGGGAGGAATGGTGGGACAAATGGGTGCACCACAGAGTAAGTTCGGCTTGCCACAAGCCCAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
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| CDS CCA 72 bp | CATTGGTCCAAAAATGTCCAGATCATCACTCAGGGCTaGCGCTGTGGCTGGGTTTCCATTGGTCACGGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: HWSKNVQIITQG*RCGWVSIGHGC Trigger: GCACCCGTGACCAATGGAAACCCAGCCACAGCGCCAGCCCTGAGTGATGATCTGGACATTTTTGGACCAATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
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| CDS TCA 72 bp | ACTTGTTGTCCTCCTCCCTCAGCAGTTTGGACAGGATaGGCTGGTGCTGCTCGTTCAGCTTCTGAGCCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: TCCPPPSAVWTG*AGAARSASEPS Trigger: AGAAGGCTCAGAAGCTGAACGAGCAGCACCAGCTCATCCTGTCCAAACTGCTGAGGGAGGAGGACAACAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027339.14 |
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| CDS CCA 72 bp | CATTCCTCCCTGAGGGCCAACAACATTCTGAGGAAGTaGCATCACTCCAGTCTGTGCGTTTCCCATGAACCC | + |
|
Preference number: 6 (lower is better) Translates to: HSSLRANNILRK*HHSSLCVSHEP Trigger: GGGTTCATGGGAAACGCACAGACTGGAGTGATGCCACTTCCTCAGAATGTTGTTGGCCCTCAGGGAGGAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
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| CDS CAA 72 bp | GGCATCACTCCAGTCTGTGCGTTTCCCATGAACCCATaGTGCATGGGCATGCCCACCATCATGCCAGTATTC | + |
|
Preference number: 6 (lower is better) Translates to: GITPVCAFPMNP*CMGMPTIMPVF Trigger: GAATACTGGCATGATGGTGGGCATGCCCATGCACAATGGGTTCATGGGAAACGCACAGACTGGAGTGATGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
||
| CDS CAA 72 bp | TTGTGGCAAGCCGAACTTACTCTGTGGTGCACCCATTaGTCCCACCATTCCTCCCTGAGGGCCAACAACATT | + |
|
Preference number: 6 (lower is better) Translates to: LWQAELTLWCTH*SHHSSLRANNI Trigger: AATGTTGTTGGCCCTCAGGGAGGAATGGTGGGACAAATGGGTGCACCACAGAGTAAGTTCGGCTTGCCACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
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| CDS GCA 72 bp | ATCACTCCAGTCTGTGCGTTTCCCATGAACCCATTGTaGATGGGCATGCCCACCATCATGCCAGTATTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: ITPVCAFPMNPL*MGMPTIMPVFC Trigger: ACAGAATACTGGCATGATGGTGGGCATGCCCATGCACAATGGGTTCATGGGAAACGCACAGACTGGAGTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
||
| CDS TCA 72 bp | CATGGAAGGAAAACCTTGAAATGCAGTCGGTGCTTGTaGGGTAAATGGTATATTTGTGGGTCCCATAAACAC | + |
|
Preference number: 6 (lower is better) Translates to: HGRKTLKCSRCL*GKWYICGSHKH Trigger: GTGTTTATGGGACCCACAAATATACCATTTACCTCACAAGCACCGACTGCATTTCAAGGTTTTCCTTCCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
||
| CDS TCA 72 bp | GGAGTCTTTGGAGAGTTGTTTCTTTGCTACTTCTTCTaGCTTTGTAGTTTGCTCAGTAAACAGATCCAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: GVFGELFLCYFF*LCSLLSKQIQV Trigger: GACCTGGATCTGTTTACTGAGCAAACTACAAAGTCAGAAGAAGTAGCAAAGAAACAACTCTCCAAAGACTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027339.14 ENSMUST00000129254.8 |
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