Pregenerated sensors for SMAGP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053559Ensembl transcript IDs: ENSMUST00000066068.7, ENSMUST00000172334.9, ENSMUST00000229307.2, ENSMUST00000229965.2, ENSMUST00000230280.2, ENSMUST00000230517.2
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCTGGACCCTGGAGTCAGTGATTCCGGTATTGGGGGCTGTGTCCTaGGAGGTGAGTGGATGTGCCAGTATCACCCAACGCCACTCCCTG | + |
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Preference number: 1 (lower is better) Translates to: LWTLESVIPVLGAVS*EVSGCASITQRHSL Trigger: CAGGGAGTGGCGTTGGGTGATACTGGCACATCCACTCACCTCCCAGGACACAGCCCCCAATACCGGAATCACTGACTCCAGGGTCCAGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 ENSMUST00000229965.2 ENSMUST00000230280.2 |
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| 3UTR CCA 90 bp | GGAGTCAGTGATTCCGGTATTGGGGGCTGTGTCCTGGGAGGTGAGTaGATGTGCCAGTATCACCCAACGCCACTCCCTGGCTTTAGAGCA | + |
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Preference number: 1 (lower is better) Translates to: GVSDSGIGGCVLGGE*MCQYHPTPLPGFRA Trigger: TGCTCTAAAGCCAGGGAGTGGCGTTGGGTGATACTGGCACATCCACTCACCTCCCAGGACACAGCCCCCAATACCGGAATCACTGACTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 ENSMUST00000229965.2 ENSMUST00000230280.2 |
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| 3UTR TCA 90 bp | TGGGAAGCATTAGATGAAGTACTCTTCCTTCTCTCTGCCCTTGGCTaGGTCAGTCTCCATCTGGAGGATGGCGCTGGGCTCCCCTTCTGC | + |
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Preference number: 1 (lower is better) Translates to: WEALDEVLFLLSALG*VSLHLEDGAGLPFC Trigger: GCAGAAGGGGAGCCCAGCGCCATCCTCCAGATGGAGACTGACTCAGCCAAGGGCAGAGAGAAGGAAGAGTACTTCATCTAATGCTTCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000229965.2 ENSMUST00000230280.2 |
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| 3UTR GCA 90 bp | AGTGATTCCGGTATTGGGGGCTGTGTCCTGGGAGGTGAGTGGATGTaGCAGTATCACCCAACGCCACTCCCTGGCTTTAGAGCAAACGTT | + |
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Preference number: 1 (lower is better) Translates to: SDSGIGGCVLGGEWM*QYHPTPLPGFRANV Trigger: AACGTTTGCTCTAAAGCCAGGGAGTGGCGTTGGGTGATACTGGCACATCCACTCACCTCCCAGGACACAGCCCCCAATACCGGAATCACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 ENSMUST00000229965.2 ENSMUST00000230280.2 |
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| 3UTR CCA 90 bp | GTCCTTATCAAGGCCCAGCATCATGAACAGCTTTCTCCGTGTCTCTaGACCCTGGAGTCAGTGATTCCGGTATTGGGGGCTGTGTCCTGG | + |
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Preference number: 1 (lower is better) Translates to: VLIKAQHHEQLSPCL*TLESVIPVLGAVSW Trigger: CCAGGACACAGCCCCCAATACCGGAATCACTGACTCCAGGGTCCAGAGACACGGAGAAAGCTGTTCATGATGCTGGGCCTTGATAAGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 ENSMUST00000230280.2 |
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| 3UTR TCA 90 bp | TTGGTGGTCGGTTTCGAGCACTGTCCTTATCAAGGCCCAGCATCATaGACAGCTTTCTCCGTGTCTCTGGACCCTGGAGTCAGTGATTCC | + |
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Preference number: 1 (lower is better) Translates to: LVVGFEHCPYQGPAS*TAFSVSLDPGVSDS Trigger: GGAATCACTGACTCCAGGGTCCAGAGACACGGAGAAAGCTGTTCATGATGCTGGGCCTTGATAAGGACAGTGCTCGAAACCGACCACCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 ENSMUST00000230280.2 |
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| 3UTR CCA 90 bp | AGATCAAACAAAGGCAGTAACATTCTCAGACTCCTATCCCCTCCCTaGTCTGACCCCTCCCTGTGGTGTCCTGCCTCCAGAAAGACTGGA | + |
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Preference number: 1 (lower is better) Translates to: RSNKGSNILRLLSPP*SDPSLWCPASRKTG Trigger: TCCAGTCTTTCTGGAGGCAGGACACCACAGGGAGGGGTCAGACCAGGGAGGGGATAGGAGTCTGAGAATGTTACTGCCTTTGTTTGATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066068.7 ENSMUST00000230280.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGACCCTGGAGTCAGTGATTCCGGTATTGGGGGCTGTGTCCTGGGAGGTGAGTTGGGGGCTGTGTCCTaGGAGGTGAGTGGATGTGCC | + |
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Preference number: 2 (lower is better) Translates to: LDPGVSDSGIGGCVLGGELGAVS*EVSGCA Trigger: GGCACATCCACTCACCTCCCAGGACACAGCCCCCAA...CTCACCTCCCAGGACACAGCCCCCAATACCGGAATCACTGACTCCAGGGTCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 ENSMUST00000229965.2 ENSMUST00000230280.2 |
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| 3UTR-3UTR CCA 90 bp | GTCCTGGGAGGTGAGTGGATGTGCCAGTATCACCCAACGCCACTCCCTGGCTTTTCTCCATCTGGAGGATaGCGCTGGGCTCCCCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: VLGGEWMCQYHPTPLPGFSPSGG*RWAPLL Trigger: CAGAAGGGGAGCCCAGCGCCATCCTCCAGATGGAGA...AAAGCCAGGGAGTGGCGTTGGGTGATACTGGCACATCCACTCACCTCCCAGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000229965.2 ENSMUST00000230280.2 |
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| 3UTR-3UTR CCA 90 bp | CTTTCTCCGTGTCTCTGGACCCTGGAGTCAGTGATTCCGGTATTGGGGGCTGTGTCTCCATCTGGAGGATaGCGCTGGGCTCCCCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: LSPCLWTLESVIPVLGAVSPSGG*RWAPLL Trigger: CAGAAGGGGAGCCCAGCGCCATCCTCCAGATGGAGA...CACAGCCCCCAATACCGGAATCACTGACTCCAGGGTCCAGAGACACGGAGAAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000229965.2 ENSMUST00000230280.2 |
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| 3UTR CAA 90 bp | CAGCTTTCTCCGTGTCTCTGGACCCTGGAGTCAGTGATTCCGGTATaGGGGGCTGTGTCCTGGGAGGTGAGTGGATGTGCCAGTATCACC | + |
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Preference number: 2 (lower is better) Translates to: QLSPCLWTLESVIPV*GAVSWEVSGCASIT Trigger: GGTGATACTGGCACATCCACTCACCTCCCAGGACACAGCCCCCAATACCGGAATCACTGACTCCAGGGTCCAGAGACACGGAGAAAGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 ENSMUST00000229965.2 ENSMUST00000230280.2 |
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| 3UTR-3UTR TCA 90 bp | TCTCCGTGTCTCTGGACCCTGGAGTCAGTGATTCCGGTATTGGGGGCTGTGTCCCAAGGCCCAGCATCATaGACAGCTTTCTCCGTGTCT | + |
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Preference number: 2 (lower is better) Translates to: SPCLWTLESVIPVLGAVSQGPAS*TAFSVS Trigger: AGACACGGAGAAAGCTGTTCATGATGCTGGGCCTTG...GGACACAGCCCCCAATACCGGAATCACTGACTCCAGGGTCCAGAGACACGGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 ENSMUST00000229965.2 ENSMUST00000230280.2 |
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| 3UTR-3UTR GCA 90 bp | TGTGTCCTGGGAGGTGAGTGGATGTGCCAGTATCACCCAACGCCACTCCCTGGCACTCTTCCTTCTCTCTaGCCTTGGCTGAGTCAGTCT | + |
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Preference number: 2 (lower is better) Translates to: CVLGGEWMCQYHPTPLPGTLPSL*PWLSQS Trigger: AGACTGACTCAGCCAAGGGCAGAGAGAAGGAAGAGT...GCCAGGGAGTGGCGTTGGGTGATACTGGCACATCCACTCACCTCCCAGGACACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000229965.2 ENSMUST00000230280.2 |
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| 3UTR-3UTR CCA 90 bp | GCTTTCTCCGTGTCTCTGGACCCTGGAGTCAGTGATTCCGGTATTGGGGGCTGTGTCCTGGGAGGTGAGTaGATGTGCCAGTATCACCCA | + |
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Preference number: 2 (lower is better) Translates to: AFSVSLDPGVSDSGIGGCVLGGE*MCQYHP Trigger: TGGGTGATACTGGCACATCCACTCACCTCCCAGGAC...ACAGCCCCCAATACCGGAATCACTGACTCCAGGGTCCAGAGACACGGAGAAAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 ENSMUST00000229965.2 ENSMUST00000230280.2 |
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| 3UTR-3UTR CCA 90 bp | GTGACCTCACTTCCAACTCAGGCATGGCCCCTCTTTGGTGGTCGGTTTCGAGCAGTCCTGGGAGGTGAGTaGATGTGCCAGTATCACCCA | + |
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Preference number: 2 (lower is better) Translates to: VTSLPTQAWPLFGGRFRAVLGGE*MCQYHP Trigger: TGGGTGATACTGGCACATCCACTCACCTCCCAGGAC...TGCTCGAAACCGACCACCAAAGAGGGGCCATGCCTGAGTTGGAAGTGAGGTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 ENSMUST00000230280.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGGATGTGCCAGTATCACCCAACGCCACTCCCTGGCTTTAGAGCAAACGTTCTTGGGGGCTGTGTCCTaGGAGGTGAGTGGATGTGCC | + |
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Preference number: 2 (lower is better) Translates to: SGCASITQRHSLALEQTFLGAVS*EVSGCA Trigger: GGCACATCCACTCACCTCCCAGGACACAGCCCCCAA...GAACGTTTGCTCTAAAGCCAGGGAGTGGCGTTGGGTGATACTGGCACATCCACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 ENSMUST00000229965.2 ENSMUST00000230280.2 |
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| 3UTR-3UTR CCA 90 bp | GGGAGGGGACAAAGTGGACCAGCATGTGACCTCACTTCCAACTCAGGCATGGCCCCTTCTCTCTGCCCTTaGCTGAGTCAGTCTCCATCT | + |
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Preference number: 2 (lower is better) Translates to: GRGQSGPACDLTSNSGMAPSLCP*LSQSPS Trigger: AGATGGAGACTGACTCAGCCAAGGGCAGAGAGAAGG...GGCCATGCCTGAGTTGGAAGTGAGGTCACATGCTGGTCCACTTTGTCCCCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230280.2 |
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| 3UTR-3UTR TCA 90 bp | GTGACCTCACTTCCAACTCAGGCATGGCCCCTCTTTGGTGGTCGGTTTCGAGCACAAGGCCCAGCATCATaGACAGCTTTCTCCGTGTCT | + |
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Preference number: 2 (lower is better) Translates to: VTSLPTQAWPLFGGRFRAQGPAS*TAFSVS Trigger: AGACACGGAGAAAGCTGTTCATGATGCTGGGCCTTG...TGCTCGAAACCGACCACCAAAGAGGGGCCATGCCTGAGTTGGAAGTGAGGTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 ENSMUST00000230280.2 |
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| 3UTR-3UTR TCA 90 bp | CCTCTTTGGTGGTCGGTTTCGAGCACTGTCCTTATCAAGGCCCAGCATCATGAACTGTGTCCTGGGAGGTaGGTGGATGTGCCAGTATCA | + |
|
Preference number: 2 (lower is better) Translates to: PLWWSVSSTVLIKAQHHELCPGR*VDVPVS Trigger: TGATACTGGCACATCCACTCACCTCCCAGGACACAG...TTCATGATGCTGGGCCTTGATAAGGACAGTGCTCGAAACCGACCACCAAAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 ENSMUST00000230280.2 |
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| 3UTR-3UTR TCA 90 bp | GGGAGGGGACAAAGTGGACCAGCATGTGACCTCACTTCCAACTCAGGCATGGCCCTGGGAAGCATTAGATaGAGTACTCTTCCTTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: GRGQSGPACDLTSNSGMALGSIR*STLPSL Trigger: GAGAGAAGGAAGAGTACTTCATCTAATGCTTCCCAG...GGCCATGCCTGAGTTGGAAGTGAGGTCACATGCTGGTCCACTTTGTCCCCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230280.2 |
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| 3UTR-3UTR GCA 90 bp | AGTGGATGTGCCAGTATCACCCAACGCCACTCCCTGGCTTTAGAGCAAACGTTCACTCTTCCTTCTCTCTaGCCTTGGCTGAGTCAGTCT | + |
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Preference number: 2 (lower is better) Translates to: SGCASITQRHSLALEQTFTLPSL*PWLSQS Trigger: AGACTGACTCAGCCAAGGGCAGAGAGAAGGAAGAGT...GAACGTTTGCTCTAAAGCCAGGGAGTGGCGTTGGGTGATACTGGCACATCCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000229965.2 ENSMUST00000230280.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGGATGTGCCAGTATCACCCAACGCCACTCCCTGGCTTTAGAGCAAACGTTCTTGGCCCCTCCAGCCTaGGAAGCATTAGATGAAGTA | + |
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Preference number: 2 (lower is better) Translates to: SGCASITQRHSLALEQTFLAPPA*EALDEV Trigger: TACTTCATCTAATGCTTCCCAGGCTGGAGGGGCCAA...GAACGTTTGCTCTAAAGCCAGGGAGTGGCGTTGGGTGATACTGGCACATCCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000229965.2 ENSMUST00000230280.2 |
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| 3UTR-3UTR GCA 90 bp | AACAGTAGAAGTTTGAGGCTGATTGGGGAACAGTGGGGCTCAGATCAAACAAAGCTCCCTGTGGTGTCCTaGCTCCAGAAAGACTGGATA | + |
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Preference number: 2 (lower is better) Translates to: NSRSLRLIGEQWGSDQTKLPVVS*LQKDWI Trigger: TATCCAGTCTTTCTGGAGGCAGGACACCACAGGGAG...CTTTGTTTGATCTGAGCCCCACTGTTCCCCAATCAGCCTCAAACTTCTACTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066068.7 ENSMUST00000230280.2 |
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| 3UTR-3UTR CCA 90 bp | AACAGTAGAAGTTTGAGGCTGATTGGGGAACAGTGGGGCTCAGATCAAACAAAGAAGTTTGAGGCTGATTaGGGAACAGTGGGGCTCAGA | + |
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Preference number: 2 (lower is better) Translates to: NSRSLRLIGEQWGSDQTKKFEAD*GTVGLR Trigger: TCTGAGCCCCACTGTTCCCCAATCAGCCTCAAACTT...CTTTGTTTGATCTGAGCCCCACTGTTCCCCAATCAGCCTCAAACTTCTACTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066068.7 ENSMUST00000230280.2 |
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| 3UTR CCA 72 bp | GATTCCGGTATTGGGGGCTGTGTCCTGGGAGGTGAGTaGATGTGCCAGTATCACCCAACGCCACTCCCTGGC | + |
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Preference number: 3 (lower is better) Translates to: DSGIGGCVLGGE*MCQYHPTPLPG Trigger: GCCAGGGAGTGGCGTTGGGTGATACTGGCACATCCACTCACCTCCCAGGACACAGCCCCCAATACCGGAATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 ENSMUST00000229965.2 ENSMUST00000230280.2 |
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| 3UTR-3UTR CAA 90 bp | CTGGACCCTGGAGTCAGTGATTCCGGTATTGGGGGCTGTGTCCTGGGAGGTGAGTCCTTCTCTCTGCCCTaGGCTGAGTCAGTCTCCATC | + |
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Preference number: 3 (lower is better) Translates to: LDPGVSDSGIGGCVLGGESFSLP*AESVSI Trigger: GATGGAGACTGACTCAGCCAAGGGCAGAGAGAAGGA...CTCACCTCCCAGGACACAGCCCCCAATACCGGAATCACTGACTCCAGGGTCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000229965.2 ENSMUST00000230280.2 |
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| 3UTR-3UTR CAA 90 bp | TTGGGGGCTGTGTCCTGGGAGGTGAGTGGATGTGCCAGTATCACCCAACGCCACTCCTTCTCTCTGCCCTaGGCTGAGTCAGTCTCCATC | + |
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Preference number: 3 (lower is better) Translates to: LGAVSWEVSGCASITQRHSFSLP*AESVSI Trigger: GATGGAGACTGACTCAGCCAAGGGCAGAGAGAAGGA...GTGGCGTTGGGTGATACTGGCACATCCACTCACCTCCCAGGACACAGCCCCCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000229965.2 ENSMUST00000230280.2 |
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| 3UTR GCA 72 bp | GGTATTGGGGGCTGTGTCCTGGGAGGTGAGTGGATGTaGCAGTATCACCCAACGCCACTCCCTGGCTTTAGA | + |
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Preference number: 3 (lower is better) Translates to: GIGGCVLGGEWM*QYHPTPLPGFR Trigger: TCTAAAGCCAGGGAGTGGCGTTGGGTGATACTGGCACATCCACTCACCTCCCAGGACACAGCCCCCAATACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 ENSMUST00000229965.2 ENSMUST00000230280.2 |
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| 3UTR CCA 72 bp | CTGGAGTCAGTGATTCCGGTATTGGGGGCTGTGTCCTaGGAGGTGAGTGGATGTGCCAGTATCACCCAACGC | + |
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Preference number: 3 (lower is better) Translates to: LESVIPVLGAVS*EVSGCASITQR Trigger: GCGTTGGGTGATACTGGCACATCCACTCACCTCCCAGGACACAGCCCCCAATACCGGAATCACTGACTCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 ENSMUST00000229965.2 ENSMUST00000230280.2 |
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| 3UTR CCA 72 bp | GTGGACCAGCATGTGACCTCACTTCCAACTCAGGCATaGCCCCTCTTTGGTGGTCGGTTTCGAGCACTGTCC | + |
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Preference number: 3 (lower is better) Translates to: VDQHVTSLPTQA*PLFGGRFRALS Trigger: GGACAGTGCTCGAAACCGACCACCAAAGAGGGGCCATGCCTGAGTTGGAAGTGAGGTCACATGCTGGTCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 ENSMUST00000230280.2 |
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| 3UTR-3UTR CAA 90 bp | ACTCAGGCATGGCCCCTCTTTGGTGGTCGGTTTCGAGCACTGTCCTTATCAAGGTCAGTGATTCCGGTATaGGGGGCTGTGTCCTGGGAG | + |
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Preference number: 3 (lower is better) Translates to: TQAWPLFGGRFRALSLSRSVIPV*GAVSWE Trigger: CTCCCAGGACACAGCCCCCAATACCGGAATCACTGA...CCTTGATAAGGACAGTGCTCGAAACCGACCACCAAAGAGGGGCCATGCCTGAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 ENSMUST00000230280.2 |
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| 3UTR CCA 72 bp | GACCTCACTTCCAACTCAGGCATGGCCCCTCTTTGGTaGTCGGTTTCGAGCACTGTCCTTATCAAGGCCCAG | + |
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Preference number: 3 (lower is better) Translates to: DLTSNSGMAPLW*SVSSTVLIKAQ Trigger: CTGGGCCTTGATAAGGACAGTGCTCGAAACCGACCACCAAAGAGGGGCCATGCCTGAGTTGGAAGTGAGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 ENSMUST00000230280.2 |
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| 3UTR TCA 72 bp | TCGTCAACTAGGGAGGGGACAAAGTGGACCAGCATGTaGCCTCACTTCCAACTCAGGCATGGCCCCTCTTTG | + |
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Preference number: 3 (lower is better) Translates to: SSTREGTKWTSM*PHFQLRHGPSL Trigger: CAAAGAGGGGCCATGCCTGAGTTGGAAGTGAGGTCACATGCTGGTCCACTTTGTCCCCTCCCTAGTTGACGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 ENSMUST00000230280.2 |
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| 3UTR CCA 72 bp | TGTGACCTCACTTCCAACTCAGGCATGGCCCCTCTTTaGTGGTCGGTTTCGAGCACTGTCCTTATCAAGGCC | + |
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Preference number: 3 (lower is better) Translates to: CDLTSNSGMAPL*WSVSSTVLIKA Trigger: GGCCTTGATAAGGACAGTGCTCGAAACCGACCACCAAAGAGGGGCCATGCCTGAGTTGGAAGTGAGGTCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 ENSMUST00000230280.2 |
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| 3UTR TCA 72 bp | GGTTTCGAGCACTGTCCTTATCAAGGCCCAGCATCATaGACAGCTTTCTCCGTGTCTCTGGACCCTGGAGTC | + |
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Preference number: 3 (lower is better) Translates to: GFEHCPYQGPAS*TAFSVSLDPGV Trigger: GACTCCAGGGTCCAGAGACACGGAGAAAGCTGTTCATGATGCTGGGCCTTGATAAGGACAGTGCTCGAAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 ENSMUST00000230280.2 |
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| 3UTR-3UTR CAA 90 bp | AGATCAAACAAAGGCAGTAACATTCTCAGACTCCTATCCCCTCCCTGGTCTGACTCAGTGATTCCGGTATaGGGGGCTGTGTCCTGGGAG | + |
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Preference number: 3 (lower is better) Translates to: RSNKGSNILRLLSPPWSDSVIPV*GAVSWE Trigger: CTCCCAGGACACAGCCCCCAATACCGGAATCACTGA...GTCAGACCAGGGAGGGGATAGGAGTCTGAGAATGTTACTGCCTTTGTTTGATCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066068.7 ENSMUST00000230280.2 |
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| CDS-3UTR CCA 90 bp | GTATTGGGGGCTGTGTCCTGGGAGGTGAGTGGATGTGCCAGTATCACCCAACGCGGCCTCTTCAGCTTGTaGGGACAGGGTCTCAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: VLGAVSWEVSGCASITQRGLFSL*GQGLRG Trigger: GCCCCTGAGACCCTGTCCCCACAAGCTGAAGAGGCC...GCGTTGGGTGATACTGGCACATCCACTCACCTCCCAGGACACAGCCCCCAATAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 ENSMUST00000229965.2 ENSMUST00000230280.2 |
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| CDS-3UTR CCA 90 bp | GTGTCTCTGGACCCTGGAGTCAGTGATTCCGGTATTGGGGGCTGTGTCCTGGGAGGCCTCTTCAGCTTGTaGGGACAGGGTCTCAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: VSLDPGVSDSGIGGCVLGGLFSL*GQGLRG Trigger: GCCCCTGAGACCCTGTCCCCACAAGCTGAAGAGGCC...TCCCAGGACACAGCCCCCAATACCGGAATCACTGACTCCAGGGTCCAGAGACAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 ENSMUST00000229965.2 ENSMUST00000230280.2 |
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| CDS-3UTR CCA 90 bp | TGGACCCTGGAGTCAGTGATTCCGGTATTGGGGGCTGTGTCCTGGGAGGTGAGTTCTGGAGGATGGCGCTaGGCTCCCCTTCTGCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: WTLESVIPVLGAVSWEVSSGGWR*APLLQA Trigger: AGCCTGCAGAAGGGGAGCCCAGCGCCATCCTCCAGA...ACTCACCTCCCAGGACACAGCCCCCAATACCGGAATCACTGACTCCAGGGTCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 |
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| 3UTR CAA 72 bp | CCGTGTCTCTGGACCCTGGAGTCAGTGATTCCGGTATaGGGGGCTGTGTCCTGGGAGGTGAGTGGATGTGCC | + |
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Preference number: 4 (lower is better) Translates to: PCLWTLESVIPV*GAVSWEVSGCA Trigger: GGCACATCCACTCACCTCCCAGGACACAGCCCCCAATACCGGAATCACTGACTCCAGGGTCCAGAGACACGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 ENSMUST00000229965.2 ENSMUST00000230280.2 |
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| CDS-3UTR CCA 90 bp | GGAGGTGAGTGGATGTGCCAGTATCACCCAACGCCACTCCCTGGCTTTAGAGCAGGCCTCTTCAGCTTGTaGGGACAGGGTCTCAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: GGEWMCQYHPTPLPGFRAGLFSL*GQGLRG Trigger: GCCCCTGAGACCCTGTCCCCACAAGCTGAAGAGGCC...TGCTCTAAAGCCAGGGAGTGGCGTTGGGTGATACTGGCACATCCACTCACCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 ENSMUST00000229307.2 ENSMUST00000229965.2 ENSMUST00000230280.2 |
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| CDS-3UTR GCA 90 bp | GAGTCAGTGATTCCGGTATTGGGGGCTGTGTCCTGGGAGGTGAGTGGATGTGCCGCTGGGCTCCCCTTCTaGAGGCTCATAGGTGACGTA | + |
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Preference number: 4 (lower is better) Translates to: ESVIPVLGAVSWEVSGCAAGLPF*RLIGDV Trigger: TACGTCACCTATGAGCCTGCAGAAGGGGAGCCCAGC...GGCACATCCACTCACCTCCCAGGACACAGCCCCCAATACCGGAATCACTGACTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 |
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| CDS-3UTR CCA 90 bp | AGCGGCTTAGTGTTGGAGCCAAGAATTGGCCCCTCCAGCCTGGGAAGCATTAGAGGCCTCTTCAGCTTGTaGGGACAGGGTCTCAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: SGLVLEPRIGPSSLGSIRGLFSL*GQGLRG Trigger: GCCCCTGAGACCCTGTCCCCACAAGCTGAAGAGGCC...TCTAATGCTTCCCAGGCTGGAGGGGCCAATTCTTGGCTCCAACACTAAGCCGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000229965.2 ENSMUST00000230280.2 |
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| CDS-3UTR CCA 90 bp | GAGGTGAGTGGATGTGCCAGTATCACCCAACGCCACTCCCTGGCTTTAGAGCAATCTGGAGGATGGCGCTaGGCTCCCCTTCTGCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: EVSGCASITQRHSLALEQSGGWR*APLLQA Trigger: AGCCTGCAGAAGGGGAGCCCAGCGCCATCCTCCAGA...TTGCTCTAAAGCCAGGGAGTGGCGTTGGGTGATACTGGCACATCCACTCACCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 ENSMUST00000229307.2 |
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| CDS-3UTR CCA 90 bp | GTGGACCAGCATGTGACCTCACTTCCAACTCAGGCATGGCCCCTCTTTGGTGGTTCTCCATCTGGAGGATaGCGCTGGGCTCCCCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: VDQHVTSLPTQAWPLFGGSPSGG*RWAPLL Trigger: CAGAAGGGGAGCCCAGCGCCATCCTCCAGATGGAGA...ACCACCAAAGAGGGGCCATGCCTGAGTTGGAAGTGAGGTCACATGCTGGTCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 |
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| CDS-3UTR CCA 90 bp | CAACGCCACTCCCTGGCTTTAGAGCAAACGTTCCCTAACTACAGAGGCAGCGGCTCTCCATCTGGAGGATaGCGCTGGGCTCCCCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: QRHSLALEQTFPNYRGSGSPSGG*RWAPLL Trigger: CAGAAGGGGAGCCCAGCGCCATCCTCCAGATGGAGA...GCCGCTGCCTCTGTAGTTAGGGAACGTTTGCTCTAAAGCCAGGGAGTGGCGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 ENSMUST00000229307.2 |
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| CDS-3UTR TCA 90 bp | CTACAGAGGCAGCGGCTTAGTGTTGGAGCCAAGAATTGGCCCCTCCAGCCTGGGCTGCAGGCTCATAGGTaGCGTAGCTGCCTTTGTTCT | + |
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Preference number: 4 (lower is better) Translates to: LQRQRLSVGAKNWPLQPGLQAHR*RSCLCS Trigger: AGAACAAAGGCAGCTACGTCACCTATGAGCCTGCAG...CCCAGGCTGGAGGGGCCAATTCTTGGCTCCAACACTAAGCCGCTGCCTCTGTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 ENSMUST00000229307.2 ENSMUST00000230517.2 |
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| CDS-3UTR GCA 90 bp | GTGACCTCACTTCCAACTCAGGCATGGCCCCTCTTTGGTGGTCGGTTTCGAGCAGCTGGGCTCCCCTTCTaGAGGCTCATAGGTGACGTA | + |
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Preference number: 4 (lower is better) Translates to: VTSLPTQAWPLFGGRFRAAGLPF*RLIGDV Trigger: TACGTCACCTATGAGCCTGCAGAAGGGGAGCCCAGC...TGCTCGAAACCGACCACCAAAGAGGGGCCATGCCTGAGTTGGAAGTGAGGTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 |
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| CDS-3UTR GCA 90 bp | CCTAACTACAGAGGCAGCGGCTTAGTGTTGGAGCCAAGAATTGGCCCCTCCAGCGCTGGGCTCCCCTTCTaGAGGCTCATAGGTGACGTA | + |
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Preference number: 4 (lower is better) Translates to: PNYRGSGLVLEPRIGPSSAGLPF*RLIGDV Trigger: TACGTCACCTATGAGCCTGCAGAAGGGGAGCCCAGC...GCTGGAGGGGCCAATTCTTGGCTCCAACACTAAGCCGCTGCCTCTGTAGTTAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 ENSMUST00000229307.2 ENSMUST00000230517.2 |
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| CDS-3UTR CCA 90 bp | CACTCCCTGGCTTTAGAGCAAACGTTCCCTAACTACAGAGGCAGCGGCTTAGTGTCTGGAGGATGGCGCTaGGCTCCCCTTCTGCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: HSLALEQTFPNYRGSGLVSGGWR*APLLQA Trigger: AGCCTGCAGAAGGGGAGCCCAGCGCCATCCTCCAGA...CACTAAGCCGCTGCCTCTGTAGTTAGGGAACGTTTGCTCTAAAGCCAGGGAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 ENSMUST00000229307.2 |
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| CDS-3UTR CCA 90 bp | AGAGGCAGCGGCTTAGTGTTGGAGCCAAGAATTGGCCCCTCCAGCCTGGGAAGCCCTTCTCTCTGCCCTTaGCTGAGTCAGTCTCCATCT | + |
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Preference number: 4 (lower is better) Translates to: RGSGLVLEPRIGPSSLGSPSLCP*LSQSPS Trigger: AGATGGAGACTGACTCAGCCAAGGGCAGAGAGAAGG...GCTTCCCAGGCTGGAGGGGCCAATTCTTGGCTCCAACACTAAGCCGCTGCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 ENSMUST00000229307.2 ENSMUST00000230517.2 |
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| CDS-3UTR CCA 90 bp | CAAACGTTCCCTAACTACAGAGGCAGCGGCTTAGTGTTGGAGCCAAGAATTGGCTCTGGAGGATGGCGCTaGGCTCCCCTTCTGCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: QTFPNYRGSGLVLEPRIGSGGWR*APLLQA Trigger: AGCCTGCAGAAGGGGAGCCCAGCGCCATCCTCCAGA...GCCAATTCTTGGCTCCAACACTAAGCCGCTGCCTCTGTAGTTAGGGAACGTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 ENSMUST00000229307.2 ENSMUST00000230517.2 |
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| CDS-3UTR CCA 90 bp | CAACTCAGGCATGGCCCCTCTTTGGTGGTCGGTTTCGAGCACTGTCCTTATCAATCTCCATCTGGAGGATaGCGCTGGGCTCCCCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: QLRHGPSLVVGFEHCPYQSPSGG*RWAPLL Trigger: CAGAAGGGGAGCCCAGCGCCATCCTCCAGATGGAGA...TTGATAAGGACAGTGCTCGAAACCGACCACCAAAGAGGGGCCATGCCTGAGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 |
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| CDS-3UTR TCA 90 bp | TCCTGGGAGGTGAGTGGATGTGCCAGTATCACCCAACGCCACTCCCTGGCTTTACTGCAGGCTCATAGGTaGCGTAGCTGCCTTTGTTCT | + |
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Preference number: 4 (lower is better) Translates to: SWEVSGCASITQRHSLALLQAHR*RSCLCS Trigger: AGAACAAAGGCAGCTACGTCACCTATGAGCCTGCAG...TAAAGCCAGGGAGTGGCGTTGGGTGATACTGGCACATCCACTCACCTCCCAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 |
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| CDS-3UTR TCA 90 bp | CCTAACTACAGAGGCAGCGGCTTAGTGTTGGAGCCAAGAATTGGCCCCTCCAGCCTGCAGGCTCATAGGTaGCGTAGCTGCCTTTGTTCT | + |
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Preference number: 4 (lower is better) Translates to: PNYRGSGLVLEPRIGPSSLQAHR*RSCLCS Trigger: AGAACAAAGGCAGCTACGTCACCTATGAGCCTGCAG...GCTGGAGGGGCCAATTCTTGGCTCCAACACTAAGCCGCTGCCTCTGTAGTTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 ENSMUST00000229307.2 ENSMUST00000230517.2 |
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| CDS-3UTR TCA 90 bp | TGGATGTGCCAGTATCACCCAACGCCACTCCCTGGCTTTAGAGCAAACGTTCCCGCCTTTGTTCTGCAATaGGCGCTGTGCTGGCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: WMCQYHPTPLPGFRANVPAFVLQ*ALCWPL Trigger: AAGAGGCCAGCACAGCGCTCATTGCAGAACAAAGGC...GGGAACGTTTGCTCTAAAGCCAGGGAGTGGCGTTGGGTGATACTGGCACATCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000229965.2 ENSMUST00000230280.2 |
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| CDS-3UTR GCA 90 bp | AGTGGATGTGCCAGTATCACCCAACGCCACTCCCTGGCTTTAGAGCAAACGTTCGCTGGGCTCCCCTTCTaGAGGCTCATAGGTGACGTA | + |
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Preference number: 4 (lower is better) Translates to: SGCASITQRHSLALEQTFAGLPF*RLIGDV Trigger: TACGTCACCTATGAGCCTGCAGAAGGGGAGCCCAGC...GAACGTTTGCTCTAAAGCCAGGGAGTGGCGTTGGGTGATACTGGCACATCCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 ENSMUST00000229307.2 |
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| CDS-3UTR GCA 90 bp | GTCCTGGGAGGTGAGTGGATGTGCCAGTATCACCCAACGCCACTCCCTGGCTTTACTCTTCCTTCTCTCTaGCCTTGGCTGAGTCAGTCT | + |
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Preference number: 4 (lower is better) Translates to: VLGGEWMCQYHPTPLPGFTLPSL*PWLSQS Trigger: AGACTGACTCAGCCAAGGGCAGAGAGAAGGAAGAGT...AAAGCCAGGGAGTGGCGTTGGGTGATACTGGCACATCCACTCACCTCCCAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 |
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| CDS-3UTR CCA 90 bp | AGTATCACCCAACGCCACTCCCTGGCTTTAGAGCAAACGTTCCCTAACTACAGAGGCCTCTTCAGCTTGTaGGGACAGGGTCTCAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: SITQRHSLALEQTFPNYRGLFSL*GQGLRG Trigger: GCCCCTGAGACCCTGTCCCCACAAGCTGAAGAGGCC...TCTGTAGTTAGGGAACGTTTGCTCTAAAGCCAGGGAGTGGCGTTGGGTGATACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 ENSMUST00000229307.2 ENSMUST00000229965.2 ENSMUST00000230280.2 |
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| CDS-3UTR CCA 90 bp | CAAACGTTCCCTAACTACAGAGGCAGCGGCTTAGTGTTGGAGCCAAGAATTGGCTCTCCATCTGGAGGATaGCGCTGGGCTCCCCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: QTFPNYRGSGLVLEPRIGSPSGG*RWAPLL Trigger: CAGAAGGGGAGCCCAGCGCCATCCTCCAGATGGAGA...GCCAATTCTTGGCTCCAACACTAAGCCGCTGCCTCTGTAGTTAGGGAACGTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 ENSMUST00000229307.2 ENSMUST00000230517.2 |
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| CDS-3UTR TCA 90 bp | CGCCACTCCCTGGCTTTAGAGCAAACGTTCCCTAACTACAGAGGCAGCGGCTTACTGCAGGCTCATAGGTaGCGTAGCTGCCTTTGTTCT | + |
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Preference number: 4 (lower is better) Translates to: RHSLALEQTFPNYRGSGLLQAHR*RSCLCS Trigger: AGAACAAAGGCAGCTACGTCACCTATGAGCCTGCAG...TAAGCCGCTGCCTCTGTAGTTAGGGAACGTTTGCTCTAAAGCCAGGGAGTGGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 ENSMUST00000229307.2 |
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| CDS-3UTR CCA 90 bp | ACGTTCCCTAACTACAGAGGCAGCGGCTTAGTGTTGGAGCCAAGAATTGGCCCCCCTTCTCTCTGCCCTTaGCTGAGTCAGTCTCCATCT | + |
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Preference number: 4 (lower is better) Translates to: TFPNYRGSGLVLEPRIGPPSLCP*LSQSPS Trigger: AGATGGAGACTGACTCAGCCAAGGGCAGAGAGAAGG...GGGGCCAATTCTTGGCTCCAACACTAAGCCGCTGCCTCTGTAGTTAGGGAACGT 54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 4 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 ENSMUST00000229307.2 ENSMUST00000230517.2 |
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| CDS-3UTR CCA 90 bp | GAGGTGAGTGGATGTGCCAGTATCACCCAACGCCACTCCCTGGCTTTAGAGCAACCTTCTCTCTGCCCTTaGCTGAGTCAGTCTCCATCT | + |
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Preference number: 4 (lower is better) Translates to: EVSGCASITQRHSLALEQPSLCP*LSQSPS Trigger: AGATGGAGACTGACTCAGCCAAGGGCAGAGAGAAGG...TTGCTCTAAAGCCAGGGAGTGGCGTTGGGTGATACTGGCACATCCACTCACCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 ENSMUST00000229307.2 |
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| CDS-3UTR CCA 90 bp | TTAGAGCAAACGTTCCCTAACTACAGAGGCAGCGGCTTAGTGTTGGAGCCAAGACCTTCTCTCTGCCCTTaGCTGAGTCAGTCTCCATCT | + |
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Preference number: 4 (lower is better) Translates to: LEQTFPNYRGSGLVLEPRPSLCP*LSQSPS Trigger: AGATGGAGACTGACTCAGCCAAGGGCAGAGAGAAGG...TCTTGGCTCCAACACTAAGCCGCTGCCTCTGTAGTTAGGGAACGTTTGCTCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 ENSMUST00000229307.2 ENSMUST00000230517.2 |
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| CDS-3UTR CAA 90 bp | GTATTGGGGGCTGTGTCCTGGGAGGTGAGTGGATGTGCCAGTATCACCCAACGCGCTGGCCTCTTCAGCTaGTGGGGACAGGGTCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: VLGAVSWEVSGCASITQRAGLFS*WGQGLR Trigger: CCTGAGACCCTGTCCCCACAAGCTGAAGAGGCCAGC...GCGTTGGGTGATACTGGCACATCCACTCACCTCCCAGGACACAGCCCCCAATAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 ENSMUST00000229965.2 ENSMUST00000230280.2 |
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| CDS-3UTR CAA 90 bp | GTCAGTGATTCCGGTATTGGGGGCTGTGTCCTGGGAGGTGAGTGGATGTGCCAGGCTGGCCTCTTCAGCTaGTGGGGACAGGGTCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: VSDSGIGGCVLGGEWMCQAGLFS*WGQGLR Trigger: CCTGAGACCCTGTCCCCACAAGCTGAAGAGGCCAGC...CTGGCACATCCACTCACCTCCCAGGACACAGCCCCCAATACCGGAATCACTGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 ENSMUST00000229965.2 ENSMUST00000230280.2 |
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| CDS-3UTR CAA 90 bp | ATTGGGGGCTGTGTCCTGGGAGGTGAGTGGATGTGCCAGTATCACCCAACGCCAGCTGGCCTCTTCAGCTaGTGGGGACAGGGTCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: IGGCVLGGEWMCQYHPTPAGLFS*WGQGLR Trigger: CCTGAGACCCTGTCCCCACAAGCTGAAGAGGCCAGC...TGGCGTTGGGTGATACTGGCACATCCACTCACCTCCCAGGACACAGCCCCCAAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 ENSMUST00000229965.2 ENSMUST00000230280.2 |
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| CDS-3UTR CAA 90 bp | TGGACCCTGGAGTCAGTGATTCCGGTATTGGGGGCTGTGTCCTGGGAGGTGAGTGCTGGCCTCTTCAGCTaGTGGGGACAGGGTCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: WTLESVIPVLGAVSWEVSAGLFS*WGQGLR Trigger: CCTGAGACCCTGTCCCCACAAGCTGAAGAGGCCAGC...ACTCACCTCCCAGGACACAGCCCCCAATACCGGAATCACTGACTCCAGGGTCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 ENSMUST00000229965.2 ENSMUST00000230280.2 |
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| CDS-3UTR CAA 90 bp | CAACGCCACTCCCTGGCTTTAGAGCAAACGTTCCCTAACTACAGAGGCAGCGGCGCTGGCCTCTTCAGCTaGTGGGGACAGGGTCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: QRHSLALEQTFPNYRGSGAGLFS*WGQGLR Trigger: CCTGAGACCCTGTCCCCACAAGCTGAAGAGGCCAGC...GCCGCTGCCTCTGTAGTTAGGGAACGTTTGCTCTAAAGCCAGGGAGTGGCGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 ENSMUST00000229307.2 ENSMUST00000229965.2 ENSMUST00000230280.2 |
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| CDS-3UTR CAA 90 bp | TGTGTCCTGGGAGGTGAGTGGATGTGCCAGTATCACCCAACGCCACTCCCTGGCTCCTTCTCTCTGCCCTaGGCTGAGTCAGTCTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: CVLGGEWMCQYHPTPLPGSFSLP*AESVSI Trigger: GATGGAGACTGACTCAGCCAAGGGCAGAGAGAAGGA...GCCAGGGAGTGGCGTTGGGTGATACTGGCACATCCACTCACCTCCCAGGACACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 |
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| CDS CCA 90 bp | CTGCCTTTGTTCTGCAATGAGCGCTGTGCTGGCCTCTTCAGCTTGTaGGGACAGGGTCTCAGGGGCCTGAAAAACCGGCGTGGTCATCAA | + |
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Preference number: 5 (lower is better) Translates to: LPLFCNERCAGLFSL*GQGLRGLKNRRGHQ Trigger: TTGATGACCACGCCGGTTTTTCAGGCCCCTGAGACCCTGTCCCCACAAGCTGAAGAGGCCAGCACAGCGCTCATTGCAGAACAAAGGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000229965.2 ENSMUST00000230280.2 |
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| CDS-3UTR CAA 90 bp | TACAGAGGCAGCGGCTTAGTGTTGGAGCCAAGAATTGGCCCCTCCAGCCTGGGATCCTTCTCTCTGCCCTaGGCTGAGTCAGTCTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: YRGSGLVLEPRIGPSSLGSFSLP*AESVSI Trigger: GATGGAGACTGACTCAGCCAAGGGCAGAGAGAAGGA...TCCCAGGCTGGAGGGGCCAATTCTTGGCTCCAACACTAAGCCGCTGCCTCTGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 ENSMUST00000229307.2 ENSMUST00000230517.2 |
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| CDS CCA 90 bp | GGTGATAACAACTGCAATGAGCGCTGTGCTGGCCTCTTCAGCTTGTaGGGACAGGGTCTCAGGGGCCTGAAAAACCGGCGTGGTCATCAA | + |
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Preference number: 5 (lower is better) Translates to: GDNNCNERCAGLFSL*GQGLRGLKNRRGHQ Trigger: TTGATGACCACGCCGGTTTTTCAGGCCCCTGAGACCCTGTCCCCACAAGCTGAAGAGGCCAGCACAGCGCTCATTGCAGTTGTTATCACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 |
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| CDS-3UTR CAA 90 bp | CCTAACTACAGAGGCAGCGGCTTAGTGTTGGAGCCAAGAATTGGCCCCTCCAGCTCCTTCTCTCTGCCCTaGGCTGAGTCAGTCTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: PNYRGSGLVLEPRIGPSSSFSLP*AESVSI Trigger: GATGGAGACTGACTCAGCCAAGGGCAGAGAGAAGGA...GCTGGAGGGGCCAATTCTTGGCTCCAACACTAAGCCGCTGCCTCTGTAGTTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 ENSMUST00000229307.2 ENSMUST00000230517.2 |
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| CDS-3UTR CAA 90 bp | TGGATGTGCCAGTATCACCCAACGCCACTCCCTGGCTTTAGAGCAAACGTTCCCTCCTTCTCTCTGCCCTaGGCTGAGTCAGTCTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: WMCQYHPTPLPGFRANVPSFSLP*AESVSI Trigger: GATGGAGACTGACTCAGCCAAGGGCAGAGAGAAGGA...GGGAACGTTTGCTCTAAAGCCAGGGAGTGGCGTTGGGTGATACTGGCACATCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 ENSMUST00000229307.2 |
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| CDS CCA 72 bp | AACTGCAATGAGCGCTGTGCTGGCCTCTTCAGCTTGTaGGGACAGGGTCTCAGGGGCCTGAAAAACCGGCGT | + |
|
Preference number: 6 (lower is better) Translates to: NCNERCAGLFSL*GQGLRGLKNRR Trigger: ACGCCGGTTTTTCAGGCCCCTGAGACCCTGTCCCCACAAGCTGAAGAGGCCAGCACAGCGCTCATTGCAGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 ENSMUST00000229307.2 ENSMUST00000230517.2 |
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| CDS CCA 72 bp | TTCTGCAATGAGCGCTGTGCTGGCCTCTTCAGCTTGTaGGGACAGGGTCTCAGGGGCCTGAAAAACCGGCGT | + |
|
Preference number: 6 (lower is better) Translates to: FCNERCAGLFSL*GQGLRGLKNRR Trigger: ACGCCGGTTTTTCAGGCCCCTGAGACCCTGTCCCCACAAGCTGAAGAGGCCAGCACAGCGCTCATTGCAGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000229965.2 ENSMUST00000230280.2 |
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| CDS GCA 72 bp | CGAGAGCAGGGTGAGGAACACCACGGTGATAACAACTaGAATGAGCGCTGTGCTGGCCTCTTCAGCTTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: REQGEEHHGDNN*NERCAGLFSLW Trigger: CCACAAGCTGAAGAGGCCAGCACAGCGCTCATTGCAGTTGTTATCACCGTGGTGTTCCTCACCCTGCTCTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 ENSMUST00000229307.2 ENSMUST00000230517.2 |
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| CDS GCA 72 bp | AGTCTCCATCTGGAGGATGGCGCTGGGCTCCCCTTCTaGAGGCTCATAGGTGACGTAGCTGCCTTTGTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SLHLEDGAGLPF*RLIGDVAAFVL Trigger: AAGAACAAAGGCAGCTACGTCACCTATGAGCCTGCAGAAGGGGAGCCCAGCGCCATCCTCCAGATGGAGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066068.7 ENSMUST00000172334.9 ENSMUST00000229307.2 ENSMUST00000230517.2 |
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