Pregenerated sensors for SMAD9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027796Ensembl transcript IDs: ENSMUST00000029371.3
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCCTCTCAGGCCGGTTTCCCTTAAGAGCCTTGGCTTTGCTTGCCTaGCTGCCCACCCGCCTGCCCGCCCGCCCGCCCGCCTGCCTGCCT | + |
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Preference number: 1 (lower is better) Translates to: LLSGRFPLRALALLA*LPTRLPARPPACLP Trigger: AGGCAGGCAGGCGGGCGGGCGGGCGGGCAGGCGGGTGGGCAGGCAGGCAAGCAAAGCCAAGGCTCTTAAGGGAAACCGGCCTGAGAGGAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| 3UTR GCA 90 bp | AAGCCTCCTCTCAGGCCGGTTTCCCTTAAGAGCCTTGGCTTTGCTTaGCTGCCTGCCCACCCGCCTGCCCGCCCGCCCGCCCGCCTGCCT | + |
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Preference number: 1 (lower is better) Translates to: KPPLRPVSLKSLGFA*LPAHPPARPPARLP Trigger: AGGCAGGCGGGCGGGCGGGCGGGCAGGCGGGTGGGCAGGCAGGCAAGCAAAGCCAAGGCTCTTAAGGGAAACCGGCCTGAGAGGAGGCTT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| 3UTR TCA 90 bp | GTGGGCAAGCCAAACCGATACAGATCTCCATTGCCTGACCCTGCCTaGGGCAACTTGCAGTGTGCAAAGGCCTGGCTGCCCACTTTCCCC | + |
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Preference number: 1 (lower is better) Translates to: VGKPNRYRSPLPDPA*GNLQCAKAWLPTFP Trigger: GGGGAAAGTGGGCAGCCAGGCCTTTGCACACTGCAAGTTGCCTCAGGCAGGGTCAGGCAATGGAGATCTGTATCGGTTTGGCTTGCCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| 3UTR GCA 90 bp | CAACCTTCCAGTCTACAGCTTCATCTCTGCACGGGGTTTGTAGTGTaGACAGGGCAGGCAGCCATCTGCAAGGTCAGACAGGAGGGACGG | + |
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Preference number: 1 (lower is better) Translates to: QPSSLQLHLCTGFVV*TGQAAICKVRQEGR Trigger: CCGTCCCTCCTGTCTGACCTTGCAGATGGCTGCCTGCCCTGTGCACACTACAAACCCCGTGCAGAGATGAAGCTGTAGACTGGAAGGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| 3UTR TCA 90 bp | AGGCCTGAATTCACAGGGATCCACCTGCCTCTGTCTCCCTGCTGCTaGGATCAAAGGCAGGTACCACGGTACCACTACACCCTGAAGCTC | + |
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Preference number: 1 (lower is better) Translates to: RPEFTGIHLPLSPCC*DQRQVPRYHYTLKL Trigger: GAGCTTCAGGGTGTAGTGGTACCGTGGTACCTGCCTTTGATCTCAGCAGCAGGGAGACAGAGGCAGGTGGATCCCTGTGAATTCAGGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| 3UTR GCA 90 bp | AATTGCTATTTGTCACCAGGAGGAAAAATGAGGCAAGGGATGCCCTaGCTAGCCTGCACTTCCCTCCCAACCTTCCAGTCTACAGCTTCA | + |
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Preference number: 1 (lower is better) Translates to: NCYLSPGGKMRQGMP*LACTSLPTFQSTAS Trigger: TGAAGCTGTAGACTGGAAGGTTGGGAGGGAAGTGCAGGCTAGGCAGGGCATCCCTTGCCTCATTTTTCCTCCTGGTGACAAATAGCAATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| 3UTR CCA 90 bp | CTACTCCTGAATAGTTTCTTACAACTACAGATTGCCAGGGATATTTaGCCACTTGTGAGGAGATCAAAGGGGCGGTGGGAAATCTGGGAC | + |
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Preference number: 1 (lower is better) Translates to: LLLNSFLQLQIARDI*PLVRRSKGRWEIWD Trigger: GTCCCAGATTTCCCACCGCCCCTTTGATCTCCTCACAAGTGGCCAAATATCCCTGGCAATCTGTAGTTGTAAGAAACTATTCAGGAGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| 3UTR CCA 90 bp | CAAAGGGGCGGTGGGAAATCTGGGACAATGCTTTGTGTCCTTAGATaGGTACACATGGCTTTTCCAAGGAAGAAACCAGGAGAAATATCA | + |
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Preference number: 1 (lower is better) Translates to: QRGGGKSGTMLCVLR*VHMAFPRKKPGEIS Trigger: TGATATTTCTCCTGGTTTCTTCCTTGGAAAAGCCATGTGTACCCATCTAAGGACACAAAGCATTGTCCCAGATTTCCCACCGCCCCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| 3UTR TCA 90 bp | ATAGTTTCTTACAACTACAGATTGCCAGGGATATTTGGCCACTTGTaGGGAGATCAAAGGGGCGGTGGGAAATCTGGGACAATGCTTTGT | + |
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Preference number: 1 (lower is better) Translates to: IVSYNYRLPGIFGHL*GDQRGGGKSGTMLC Trigger: ACAAAGCATTGTCCCAGATTTCCCACCGCCCCTTTGATCTCCTCACAAGTGGCCAAATATCCCTGGCAATCTGTAGTTGTAAGAAACTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| 3UTR TCA 90 bp | AAGAGTAATCTTGGCTGTCTGTTTTATATACATTCGAATTTATCATaGGAGCCGGACGTGGTGGTGCACGCCTTTAATCCCAGCACTCGG | + |
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Preference number: 1 (lower is better) Translates to: KSNLGCLFYIHSNLS*EPDVVVHAFNPSTR Trigger: CCGAGTGCTGGGATTAAAGGCGTGCACCACCACGTCCGGCTCTCATGATAAATTCGAATGTATATAAAACAGACAGCCAAGATTACTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| 3UTR-3UTR GCA 90 bp | ACCCTGCCTGAGGCAACTTGCAGTGTGCAAAGGCCTGGCTGCCCACTTTCCCCTCTTTGCTTGCCTGCCTaGCCACCCGCCTGCCCGCCC | + |
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Preference number: 2 (lower is better) Translates to: TLPEATCSVQRPGCPLSPLCLPA*PPACPP Trigger: GGGCGGGCAGGCGGGTGGGCAGGCAGGCAAGCAAAG...AGGGGAAAGTGGGCAGCCAGGCCTTTGCACACTGCAAGTTGCCTCAGGCAGGGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| 3UTR-3UTR GCA 90 bp | ACCCTGCCTGAGGCAACTTGCAGTGTGCAAAGGCCTGGCTGCCCACTTTCCCCTTCACAGGGATCCACCTaGCTCTGTCTCCCTGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: TLPEATCSVQRPGCPLSPSQGST*LCLPAA Trigger: AGCAGCAGGGAGACAGAGGCAGGTGGATCCCTGTGA...AGGGGAAAGTGGGCAGCCAGGCCTTTGCACACTGCAAGTTGCCTCAGGCAGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| 3UTR-3UTR CCA 90 bp | GCCTCTGTCTCCCTGCTGCTGAGATCAAAGGCAGGTACCACGGTACCACTACACGGGCACAACCTCCTGTaGAGTGACGATGAGCTGACT | + |
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Preference number: 2 (lower is better) Translates to: ASVSLLLRSKAGTTVPLHGHNLL*SDDELT Trigger: AGTCAGCTCATCGTCACTCCACAGGAGGTTGTGCCC...GTGTAGTGGTACCGTGGTACCTGCCTTTGATCTCAGCAGCAGGGAGACAGAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| 3UTR-3UTR GCA 90 bp | CCTTGCAAAGTTCGGCTCTTGACTCTAGCAGGTAAGACGATGTGGAATGCATGGCACGATGGAAGCCCCTaGCCGAGTCTGTTCTGTGGC | + |
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Preference number: 2 (lower is better) Translates to: PCKVRLLTLAGKTMWNAWHDGSP*PSLFCG Trigger: GCCACAGAACAGACTCGGGCAGGGGCTTCCATCGTG...CCATGCATTCCACATCGTCTTACCTGCTAGAGTCAAGAGCCGAACTTTGCAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| 3UTR-3UTR GCA 90 bp | TATCATTGTCTAGCACAGACTACCAAAGTGTGGTGTGTGGCATTTCAGGAAGGCGCCCGCCCGCCTGCCTaGCTGCCTGCTTGCTTGTTT | + |
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Preference number: 2 (lower is better) Translates to: YHCLAQTTKVWCVAFQEGARPPA*LPACLF Trigger: AAACAAGCAAGCAGGCAGGCAGGCAGGCGGGCGGGC...GCCTTCCTGAAATGCCACACACCACACTTTGGTAGTCTGTGCTAGACAATGATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| 3UTR-3UTR GCA 90 bp | CCTTGCAAAGTTCGGCTCTTGACTCTAGCAGGTAAGACGATGTGGAATGCATGGGGGCAGGCAGCCATCTaGAAGGTCAGACAGGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: PCKVRLLTLAGKTMWNAWGQAAI*KVRQEG Trigger: TCCCTCCTGTCTGACCTTGCAGATGGCTGCCTGCCC...CCATGCATTCCACATCGTCTTACCTGCTAGAGTCAAGAGCCGAACTTTGCAAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| 3UTR-3UTR CCA 90 bp | GCCTCTGTCTCCCTGCTGCTGAGATCAAAGGCAGGTACCACGGTACCACTACACTTCCAGGAGGTGGGGTaGCTAGGAATGGAAGTAGTT | + |
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Preference number: 2 (lower is better) Translates to: ASVSLLLRSKAGTTVPLHFQEVG*LGMEVV Trigger: AACTACTTCCATTCCTAGCCACCCCACCTCCTGGAA...GTGTAGTGGTACCGTGGTACCTGCCTTTGATCTCAGCAGCAGGGAGACAGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| 3UTR-3UTR TCA 90 bp | ACCCTGCCTGAGGCAACTTGCAGTGTGCAAAGGCCTGGCTGCCCACTTTCCCCTGTCACTCAGAGGAGTTaGAGTCAAGGATTACGTTAT | + |
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Preference number: 2 (lower is better) Translates to: TLPEATCSVQRPGCPLSPVTQRS*SQGLRY Trigger: ATAACGTAATCCTTGACTTCAACTCCTCTGAGTGAC...AGGGGAAAGTGGGCAGCCAGGCCTTTGCACACTGCAAGTTGCCTCAGGCAGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| 3UTR-3UTR TCA 90 bp | CCTTGCAAAGTTCGGCTCTTGACTCTAGCAGGTAAGACGATGTGGAATGCATGGTTGCCTGACCCTGCCTaGGGCAACTTGCAGTGTGCA | + |
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Preference number: 2 (lower is better) Translates to: PCKVRLLTLAGKTMWNAWLPDPA*GNLQCA Trigger: TGCACACTGCAAGTTGCCTCAGGCAGGGTCAGGCAA...CCATGCATTCCACATCGTCTTACCTGCTAGAGTCAAGAGCCGAACTTTGCAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| 3UTR-3UTR CCA 90 bp | GCCTCTGTCTCCCTGCTGCTGAGATCAAAGGCAGGTACCACGGTACCACTACACCTCTCACAGAAGACTTaGCTCCCATCAGAGAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: ASVSLLLRSKAGTTVPLHLSQKT*LPSERN Trigger: GTTTCTCTCTGATGGGAGCCAAGTCTTCTGTGAGAG...GTGTAGTGGTACCGTGGTACCTGCCTTTGATCTCAGCAGCAGGGAGACAGAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| 3UTR-3UTR TCA 90 bp | CCTTGCAAAGTTCGGCTCTTGACTCTAGCAGGTAAGACGATGTGGAATGCATGGAGACCAGGTCAGGCCTaGATTCACAGGGATCCACCT | + |
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Preference number: 2 (lower is better) Translates to: PCKVRLLTLAGKTMWNAWRPGQA*IHRDPP Trigger: AGGTGGATCCCTGTGAATTCAGGCCTGACCTGGTCT...CCATGCATTCCACATCGTCTTACCTGCTAGAGTCAAGAGCCGAACTTTGCAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| 3UTR-3UTR GCA 90 bp | ACCCTGCCTGAGGCAACTTGCAGTGTGCAAAGGCCTGGCTGCCCACTTTCCCCTTCATCTGTCACTAATTaGTATTTGTCACCAGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: TLPEATCSVQRPGCPLSPSSVTN*YLSPGG Trigger: TCCTCCTGGTGACAAATAGCAATTAGTGACAGATGA...AGGGGAAAGTGGGCAGCCAGGCCTTTGCACACTGCAAGTTGCCTCAGGCAGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| 3UTR-3UTR CCA 90 bp | GCCTCTGTCTCCCTGCTGCTGAGATCAAAGGCAGGTACCACGGTACCACTACACGTCCCTGGACAAGCTTaGTTTTCTTTCTTGACACTC | + |
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Preference number: 2 (lower is better) Translates to: ASVSLLLRSKAGTTVPLHVPGQA*FSFLTL Trigger: GAGTGTCAAGAAAGAAAACCAAGCTTGTCCAGGGAC...GTGTAGTGGTACCGTGGTACCTGCCTTTGATCTCAGCAGCAGGGAGACAGAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| 3UTR-3UTR CCA 90 bp | CCTTGCAAAGTTCGGCTCTTGACTCTAGCAGGTAAGACGATGTGGAATGCATGGAGATGGCTTCCAGAGTaGACGCAGGAGTTCCCTGTG | + |
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Preference number: 2 (lower is better) Translates to: PCKVRLLTLAGKTMWNAWRWLPE*TQEFPV Trigger: CACAGGGAACTCCTGCGTCCACTCTGGAAGCCATCT...CCATGCATTCCACATCGTCTTACCTGCTAGAGTCAAGAGCCGAACTTTGCAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| 3UTR-3UTR CCA 90 bp | ACCCTGCCTGAGGCAACTTGCAGTGTGCAAAGGCCTGGCTGCCCACTTTCCCCTTTAGATGGGTACACATaGCTTTTCCAAGGAAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: TLPEATCSVQRPGCPLSPLDGYT*LFQGRN Trigger: GTTTCTTCCTTGGAAAAGCCATGTGTACCCATCTAA...AGGGGAAAGTGGGCAGCCAGGCCTTTGCACACTGCAAGTTGCCTCAGGCAGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| 3UTR-3UTR GCA 90 bp | GCCTCTGTCTCCCTGCTGCTGAGATCAAAGGCAGGTACCACGGTACCACTACACGCTTTCCCAAGGCTTTaGTCTTGTTTGAATCATCTG | + |
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Preference number: 2 (lower is better) Translates to: ASVSLLLRSKAGTTVPLHAFPRL*SCLNHL Trigger: CAGATGATTCAAACAAGAGCAAAGCCTTGGGAAAGC...GTGTAGTGGTACCGTGGTACCTGCCTTTGATCTCAGCAGCAGGGAGACAGAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| 3UTR-3UTR GCA 90 bp | GCTACTCTTCTTTCTGTTGTCGTTATGAGGATAACTCCACCCTTAGAACACAATAGCCTTGGCTTTGCTTaGCTGCCTGCCCACCCGCCT | + |
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Preference number: 2 (lower is better) Translates to: ATLLSVVVMRITPPLEHNSLGFA*LPAHPP Trigger: AGGCGGGTGGGCAGGCAGGCAAGCAAAGCCAAGGCT...ATTGTGTTCTAAGGGTGGAGTTATCCTCATAACGACAACAGAAAGAAGAGTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| 3UTR-3UTR GCA 90 bp | GTTCGGCTCTTGACTCTAGCAGGTAAGACGATGTGGAATGCATGGTATATTTTAGTGCAAAGGCCTGGCTaGCCACTTTCCCCTTCACCC | + |
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Preference number: 2 (lower is better) Translates to: VRLLTLAGKTMWNAWYILVQRPG*PLSPSP Trigger: GGGTGAAGGGGAAAGTGGGCAGCCAGGCCTTTGCAC...TAAAATATACCATGCATTCCACATCGTCTTACCTGCTAGAGTCAAGAGCCGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| 3UTR-3UTR CCA 90 bp | CCTTGCAAAGTTCGGCTCTTGACTCTAGCAGGTAAGACGATGTGGAATGCATGGAGATCAAAGGGGCGGTaGGAAATCTGGGACAATGCT | + |
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Preference number: 2 (lower is better) Translates to: PCKVRLLTLAGKTMWNAWRSKGR*EIWDNA Trigger: AGCATTGTCCCAGATTTCCCACCGCCCCTTTGATCT...CCATGCATTCCACATCGTCTTACCTGCTAGAGTCAAGAGCCGAACTTTGCAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| 3UTR-3UTR TCA 90 bp | GCCTCTGTCTCCCTGCTGCTGAGATCAAAGGCAGGTACCACGGTACCACTACACACAGAGGGAATGAGCTaGTATATGCATGTCTATATA | + |
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Preference number: 2 (lower is better) Translates to: ASVSLLLRSKAGTTVPLHTEGMS*YMHVYI Trigger: TATATAGACATGCATATATCAGCTCATTCCCTCTGT...GTGTAGTGGTACCGTGGTACCTGCCTTTGATCTCAGCAGCAGGGAGACAGAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| 3UTR-3UTR TCA 90 bp | GCCTCTGTCTCCCTGCTGCTGAGATCAAAGGCAGGTACCACGGTACCACTACACCCTTTTCAAAGGGCTTaGAGTAAACTTAGAAGCAAT | + |
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Preference number: 2 (lower is better) Translates to: ASVSLLLRSKAGTTVPLHPFQRA*SKLRSN Trigger: ATTGCTTCTAAGTTTACTTCAAGCCCTTTGAAAAGG...GTGTAGTGGTACCGTGGTACCTGCCTTTGATCTCAGCAGCAGGGAGACAGAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| 3UTR-3UTR CCA 90 bp | CCTTGCAAAGTTCGGCTCTTGACTCTAGCAGGTAAGACGATGTGGAATGCATGGACATTCTGGGTCTTGTaGGCAAGCCAAACCGATACA | + |
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Preference number: 2 (lower is better) Translates to: PCKVRLLTLAGKTMWNAWTFWVL*ASQTDT Trigger: TGTATCGGTTTGGCTTGCCCACAAGACCCAGAATGT...CCATGCATTCCACATCGTCTTACCTGCTAGAGTCAAGAGCCGAACTTTGCAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| 3UTR CAA 90 bp | CCCAAGGCTTTGCTCTTGTTTGAATCATCTGTCACTAATTGCTATTaGTCACCAGGAGGAAAAATGAGGCAAGGGATGCCCTGCCTAGCC | + |
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Preference number: 2 (lower is better) Translates to: PKALLLFESSVTNCY*SPGGKMRQGMPCLA Trigger: GGCTAGGCAGGGCATCCCTTGCCTCATTTTTCCTCCTGGTGACAAATAGCAATTAGTGACAGATGATTCAAACAAGAGCAAAGCCTTGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| 3UTR-3UTR GCA 90 bp | GCTACTCTTCTTTCTGTTGTCGTTATGAGGATAACTCCACCCTTAGAACACAATACGGGGTTTGTAGTGTaGACAGGGCAGGCAGCCATC | + |
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Preference number: 2 (lower is better) Translates to: ATLLSVVVMRITPPLEHNTGFVV*TGQAAI Trigger: GATGGCTGCCTGCCCTGTGCACACTACAAACCCCGT...ATTGTGTTCTAAGGGTGGAGTTATCCTCATAACGACAACAGAAAGAAGAGTAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| 3UTR-3UTR CCA 90 bp | CCTTGCAAAGTTCGGCTCTTGACTCTAGCAGGTAAGACGATGTGGAATGCATGGGAGATAAAGTTTCTGTaGCTTTATCTCACAGGTCCC | + |
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Preference number: 2 (lower is better) Translates to: PCKVRLLTLAGKTMWNAWEIKFL*LYLTGP Trigger: GGGACCTGTGAGATAAAGCCACAGAAACTTTATCTC...CCATGCATTCCACATCGTCTTACCTGCTAGAGTCAAGAGCCGAACTTTGCAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| 3UTR-3UTR TCA 90 bp | ACTGATCATGTCTTATTTTTGCTAAGACTCACACATACTGACTTGTACACAGTGCTGTCTCCCTGCTGCTaGGATCAAAGGCAGGTACCA | + |
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Preference number: 2 (lower is better) Translates to: TDHVLFLLRLTHTDLYTVLSPCC*DQRQVP Trigger: TGGTACCTGCCTTTGATCTCAGCAGCAGGGAGACAG...CACTGTGTACAAGTCAGTATGTGTGAGTCTTAGCAAAAATAAGACATGATCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| 3UTR-3UTR TCA 90 bp | GCTACTCTTCTTTCTGTTGTCGTTATGAGGATAACTCCACCCTTAGAACACAATCCACTTGTGTGTGACTaGTTTTGCTCTAGTGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: ATLLSVVVMRITPPLEHNPLVCD*FCSSAP Trigger: AGGAGCACTAGAGCAAAATCAGTCACACACAAGTGG...ATTGTGTTCTAAGGGTGGAGTTATCCTCATAACGACAACAGAAAGAAGAGTAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| 3UTR-3UTR CCA 90 bp | ACTGATCATGTCTTATTTTTGCTAAGACTCACACATACTGACTTGTACACAGTGGGGCGGTGGGAAATCTaGGACAATGCTTTGTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: TDHVLFLLRLTHTDLYTVGRWEI*DNALCP Trigger: AGGACACAAAGCATTGTCCCAGATTTCCCACCGCCC...CACTGTGTACAAGTCAGTATGTGTGAGTCTTAGCAAAAATAAGACATGATCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| 3UTR-3UTR CCA 90 bp | TATCATTGTCTAGCACAGACTACCAAAGTGTGGTGTGTGGCATTTCAGGAAGGCATGTACCTTGAAGTCTaGAGGATATTTCCCTTATCA | + |
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Preference number: 2 (lower is better) Translates to: YHCLAQTTKVWCVAFQEGMYLEV*RIFPLS Trigger: TGATAAGGGAAATATCCTCCAGACTTCAAGGTACAT...GCCTTCCTGAAATGCCACACACCACACTTTGGTAGTCTGTGCTAGACAATGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| 3UTR-3UTR CCA 90 bp | GTTCGGCTCTTGACTCTAGCAGGTAAGACGATGTGGAATGCATGGTATATTTTACTTTGTGTCCTTAGATaGGTACACATGGCTTTTCCA | + |
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Preference number: 2 (lower is better) Translates to: VRLLTLAGKTMWNAWYILLCVLR*VHMAFP Trigger: TGGAAAAGCCATGTGTACCCATCTAAGGACACAAAG...TAAAATATACCATGCATTCCACATCGTCTTACCTGCTAGAGTCAAGAGCCGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| 3UTR CAA 90 bp | ATTCACTTTTTAATAACAACAGCTTTACCATACAAAGGGTTTGAGTaGTGTGTCCTGGTGCTAAGCTGGGGAGCAGTAGTTAAACACCTC | + |
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Preference number: 2 (lower is better) Translates to: IHFLITTALPYKGFE*CVLVLSWGAVVKHL Trigger: GAGGTGTTTAACTACTGCTCCCCAGCTTAGCACCAGGACACACAACTCAAACCCTTTGTATGGTAAAGCTGTTGTTATTAAAAAGTGAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| 3UTR-3UTR TCA 90 bp | GTTCGGCTCTTGACTCTAGCAGGTAAGACGATGTGGAATGCATGGTATATTTTACACTCACATTGCAAGTaGGGTCTTTTTAAAACCACT | + |
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Preference number: 2 (lower is better) Translates to: VRLLTLAGKTMWNAWYILHSHCK*GLFKTT Trigger: AGTGGTTTTAAAAAGACCTCACTTGCAATGTGAGTG...TAAAATATACCATGCATTCCACATCGTCTTACCTGCTAGAGTCAAGAGCCGAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| 3UTR-3UTR CCA 90 bp | ACTGATCATGTCTTATTTTTGCTAAGACTCACACATACTGACTTGTACACAGTGCATTCCTACTTCACCTaGGAAGCTATATCCAGGTAT | + |
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Preference number: 2 (lower is better) Translates to: TDHVLFLLRLTHTDLYTVHSYFT*EAISRY Trigger: ATACCTGGATATAGCTTCCCAGGTGAAGTAGGAATG...CACTGTGTACAAGTCAGTATGTGTGAGTCTTAGCAAAAATAAGACATGATCAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| 3UTR-3UTR TCA 90 bp | ACTGATCATGTCTTATTTTTGCTAAGACTCACACATACTGACTTGTACACAGTGCACGCTTCAATATTTTaGTTTCTTAACACTGCAAGG | + |
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Preference number: 2 (lower is better) Translates to: TDHVLFLLRLTHTDLYTVHASIF*FLNTAR Trigger: CCTTGCAGTGTTAAGAAATCAAAATATTGAAGCGTG...CACTGTGTACAAGTCAGTATGTGTGAGTCTTAGCAAAAATAAGACATGATCAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| 3UTR TCA 72 bp | ATGTGGGGCACAACCTCCTGTGGAGTGACGATGAGCTaGCTCGGTGGCCTTGAGTCCTGCCGACGCCCTCAC | + |
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Preference number: 3 (lower is better) Translates to: MWGTTSCGVTMS*LGGLESCRRPH Trigger: GTGAGGGCGTCGGCAGGACTCAAGGCCACCGAGTCAGCTCATCGTCACTCCACAGGAGGTTGTGCCCCACAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| 3UTR-3UTR CAA 90 bp | CCTTGCAAAGTTCGGCTCTTGACTCTAGCAGGTAAGACGATGTGGAATGCATGGGAGCCTTGGCTTTGCTaGCCTGCCTGCCCACCCGCC | + |
|
Preference number: 3 (lower is better) Translates to: PCKVRLLTLAGKTMWNAWEPWLC*PACPPA Trigger: GGCGGGTGGGCAGGCAGGCAAGCAAAGCCAAGGCTC...CCATGCATTCCACATCGTCTTACCTGCTAGAGTCAAGAGCCGAACTTTGCAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
||
| 3UTR TCA 72 bp | CCAAACCGATACAGATCTCCATTGCCTGACCCTGCCTaGGGCAACTTGCAGTGTGCAAAGGCCTGGCTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: PNRYRSPLPDPA*GNLQCAKAWLP Trigger: GGGCAGCCAGGCCTTTGCACACTGCAAGTTGCCTCAGGCAGGGTCAGGCAATGGAGATCTGTATCGGTTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
||
| 3UTR GCA 72 bp | CTTCCCTCCCAACCTTCCAGTCTACAGCTTCATCTCTaGACGGGGTTTGTAGTGTGCACAGGGCAGGCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: LPSQPSSLQLHL*TGFVVCTGQAA Trigger: GGCTGCCTGCCCTGTGCACACTACAAACCCCGTGCAGAGATGAAGCTGTAGACTGGAAGGTTGGGAGGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
||
| 3UTR TCA 72 bp | TTCACAGGGATCCACCTGCCTCTGTCTCCCTGCTGCTaGGATCAAAGGCAGGTACCACGGTACCACTACACC | + |
|
Preference number: 3 (lower is better) Translates to: FTGIHLPLSPCC*DQRQVPRYHYT Trigger: GGTGTAGTGGTACCGTGGTACCTGCCTTTGATCTCAGCAGCAGGGAGACAGAGGCAGGTGGATCCCTGTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
||
| 3UTR-3UTR CAA 90 bp | TGTAGTGTGCACAGGGCAGGCAGCCATCTGCAAGGTCAGACAGGAGGGACGGGAGGTCCCTGGACAAGCTaGGTTTTCTTTCTTGACACT | + |
|
Preference number: 3 (lower is better) Translates to: CSVHRAGSHLQGQTGGTGGPWTS*VFFLDT Trigger: AGTGTCAAGAAAGAAAACCAAGCTTGTCCAGGGACC...TCCCGTCCCTCCTGTCTGACCTTGCAGATGGCTGCCTGCCCTGTGCACACTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
||
| 3UTR GCA 72 bp | TTGTCACCAGGAGGAAAAATGAGGCAAGGGATGCCCTaGCTAGCCTGCACTTCCCTCCCAACCTTCCAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: LSPGGKMRQGMP*LACTSLPTFQS Trigger: AGACTGGAAGGTTGGGAGGGAAGTGCAGGCTAGGCAGGGCATCCCTTGCCTCATTTTTCCTCCTGGTGACAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
||
| 3UTR-3UTR CAA 90 bp | ACCCTGCCTGAGGCAACTTGCAGTGTGCAAAGGCCTGGCTGCCCACTTTCCCCTTCTTACAACTACAGATaGCCAGGGATATTTGGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: TLPEATCSVQRPGCPLSPSYNYR*PGIFGH Trigger: GTGGCCAAATATCCCTGGCAATCTGTAGTTGTAAGA...AGGGGAAAGTGGGCAGCCAGGCCTTTGCACACTGCAAGTTGCCTCAGGCAGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
||
| 3UTR-3UTR CAA 90 bp | ACCCTGCCTGAGGCAACTTGCAGTGTGCAAAGGCCTGGCTGCCCACTTTCCCCTGGTCACTCAGAGGAGTaGAAGTCAAGGATTACGTTA | + |
|
Preference number: 3 (lower is better) Translates to: TLPEATCSVQRPGCPLSPGHSEE*KSRITL Trigger: TAACGTAATCCTTGACTTCAACTCCTCTGAGTGACC...AGGGGAAAGTGGGCAGCCAGGCCTTTGCACACTGCAAGTTGCCTCAGGCAGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
||
| 3UTR GCA 72 bp | TACATTCGAATTTATCATGAGAGCCGGACGTGGTGGTaGACGCCTTTAATCCCAGCACTCGGGAGGCAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: YIRIYHESRTWW*TPLIPALGRQR Trigger: CCTCTGCCTCCCGAGTGCTGGGATTAAAGGCGTGCACCACCACGTCCGGCTCTCATGATAAATTCGAATGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
||
| 3UTR-3UTR CAA 90 bp | TGTAGTGTGCACAGGGCAGGCAGCCATCTGCAAGGTCAGACAGGAGGGACGGGAGCTTGGTTTTCTTTCTaGACACTCACATTGCAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: CSVHRAGSHLQGQTGGTGAWFSF*TLTLQV Trigger: CACTTGCAATGTGAGTGTCAAGAAAGAAAACCAAGC...TCCCGTCCCTCCTGTCTGACCTTGCAGATGGCTGCCTGCCCTGTGCACACTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
||
| 3UTR TCA 72 bp | CTGTCCTGTAACTCCTTATATAGACCAGGTCAGGCCTaGATTCACAGGGATCCACCTGCCTCTGTCTCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: LSCNSLYRPGQA*IHRDPPASVSL Trigger: CAGGGAGACAGAGGCAGGTGGATCCCTGTGAATTCAGGCCTGACCTGGTCTATATAAGGAGTTACAGGACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
||
| 3UTR-3UTR CAA 90 bp | ATCAAGCCTCCTCTCAGGCCGGTTTCCCTTAAGAGCCTTGGCTTTGCTTGCCTGCTTGCTTGTTTTAGATaGAGGCCACTGACTCCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: IKPPLRPVSLKSLGFACLLACFR*RPLTPS Trigger: GCTTGGAGTCAGTGGCCTCAATCTAAAACAAGCAAG...CAGGCAAGCAAAGCCAAGGCTCTTAAGGGAAACCGGCCTGAGAGGAGGCTTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
||
| 3UTR TCA 72 bp | TACAACTACAGATTGCCAGGGATATTTGGCCACTTGTaGGGAGATCAAAGGGGCGGTGGGAAATCTGGGACA | + |
|
Preference number: 3 (lower is better) Translates to: YNYRLPGIFGHL*GDQRGGGKSGT Trigger: TGTCCCAGATTTCCCACCGCCCCTTTGATCTCCTCACAAGTGGCCAAATATCCCTGGCAATCTGTAGTTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
||
| 3UTR GCA 72 bp | GAGGAGATCAAAGGGGCGGTGGGAAATCTGGGACAATaGTTTGTGTCCTTAGATGGGTACACATGGCTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: EEIKGAVGNLGQ*FVSLDGYTWLF Trigger: GAAAAGCCATGTGTACCCATCTAAGGACACAAAGCATTGTCCCAGATTTCCCACCGCCCCTTTGATCTCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
||
| 3UTR-3UTR CAA 90 bp | CCTTGCAAAGTTCGGCTCTTGACTCTAGCAGGTAAGACGATGTGGAATGCATGGCTACGCAGCATAAGTTaGCTTGTCAGCTTCATGGAA | + |
|
Preference number: 3 (lower is better) Translates to: PCKVRLLTLAGKTMWNAWLRSIS*LVSFME Trigger: TTCCATGAAGCTGACAAGCAAACTTATGCTGCGTAG...CCATGCATTCCACATCGTCTTACCTGCTAGAGTCAAGAGCCGAACTTTGCAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
||
| 3UTR TCA 72 bp | CTACGCAGCATAAGTTTGCTTGTCAGCTTCATGGAATaGTCGCCACATGGTCACTCAGAGGAGTTGAAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LRSISLLVSFME*SPHGHSEELKS Trigger: TGACTTCAACTCCTCTGAGTGACCATGTGGCGATCATTCCATGAAGCTGACAAGCAAACTTATGCTGCGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
||
| 3UTR TCA 72 bp | CTTGGCTGTCTGTTTTATATACATTCGAATTTATCATaGGAGCCGGACGTGGTGGTGCACGCCTTTAATCCC | + |
|
Preference number: 3 (lower is better) Translates to: LGCLFYIHSNLS*EPDVVVHAFNP Trigger: GGGATTAAAGGCGTGCACCACCACGTCCGGCTCTCATGATAAATTCGAATGTATATAAAACAGACAGCCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
||
| 3UTR GCA 72 bp | TTCAAAGGGCTTGAAGTAAACTTAGAAGCAATGGGGTaGCTAATGAGTGGCATGTACCTTGAAGTCTGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: FKGLEVNLEAMG*LMSGMYLEVWR Trigger: CCTCCAGACTTCAAGGTACATGCCACTCATTAGGCACCCCATTGCTTCTAAGTTTACTTCAAGCCCTTTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
||
| 3UTR CCA 72 bp | AATAGTTTCTTACAACTACAGATTGCCAGGGATATTTaGCCACTTGTGAGGAGATCAAAGGGGCGGTGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: NSFLQLQIARDI*PLVRRSKGRWE Trigger: TTCCCACCGCCCCTTTGATCTCCTCACAAGTGGCCAAATATCCCTGGCAATCTGTAGTTGTAAGAAACTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
||
| 3UTR CCA 72 bp | GCTATGTGTATTTCAGCTTCGGAGATAAAGTTTCTGTaGCTTTATCTCACAGGTCCCTGGACAAGCTTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: AMCISASEIKFL*LYLTGPWTSLV Trigger: AACCAAGCTTGTCCAGGGACCTGTGAGATAAAGCCACAGAAACTTTATCTCCGAAGCTGAAATACACATAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
||
| 3UTR CCA 72 bp | CTGGGACAATGCTTTGTGTCCTTAGATGGGTACACATaGCTTTTCCAAGGAAGAAACCAGGAGAAATATCAG | + |
|
Preference number: 3 (lower is better) Translates to: LGQCFVSLDGYT*LFQGRNQEKYQ Trigger: CTGATATTTCTCCTGGTTTCTTCCTTGGAAAAGCCATGTGTACCCATCTAAGGACACAAAGCATTGTCCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
||
| 3UTR CCA 72 bp | AAGTTTGCTTGTCAGCTTCATGGAATGATCGCCACATaGTCACTCAGAGGAGTTGAAGTCAAGGATTACGTT | + |
|
Preference number: 3 (lower is better) Translates to: KFACQLHGMIAT*SLRGVEVKDYV Trigger: AACGTAATCCTTGACTTCAACTCCTCTGAGTGACCATGTGGCGATCATTCCATGAAGCTGACAAGCAAACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
||
| 3UTR-3UTR CAA 90 bp | ACTGATCATGTCTTATTTTTGCTAAGACTCACACATACTGACTTGTACACAGTGTTTCCCTTAAGAGCCTaGGCTTTGCTTGCCTGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: TDHVLFLLRLTHTDLYTVFPLRA*ALLACL Trigger: CAGGCAGGCAAGCAAAGCCAAGGCTCTTAAGGGAAA...CACTGTGTACAAGTCAGTATGTGTGAGTCTTAGCAAAAATAAGACATGATCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
||
| 3UTR TCA 72 bp | CTTTTTAATAACAACAGCTTTACCATACAAAGGGTTTaGGTTGTGTGTCCTGGTGCTAAGCTGGGGAGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: LFNNNSFTIQRV*VVCPGAKLGSS Trigger: ACTGCTCCCCAGCTTAGCACCAGGACACACAACTCAAACCCTTTGTATGGTAAAGCTGTTGTTATTAAAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
||
| 3UTR-3UTR CAA 90 bp | GCTACTCTTCTTTCTGTTGTCGTTATGAGGATAACTCCACCCTTAGAACACAATCCCAAGGCTTTGCTCTaGTTTGAATCATCTGTCACT | + |
|
Preference number: 3 (lower is better) Translates to: ATLLSVVVMRITPPLEHNPKALL*FESSVT Trigger: AGTGACAGATGATTCAAACAAGAGCAAAGCCTTGGG...ATTGTGTTCTAAGGGTGGAGTTATCCTCATAACGACAACAGAAAGAAGAGTAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
||
| 3UTR TCA 72 bp | TCATGGAATGATCGCCACATGGTCACTCAGAGGAGTTaGAGTCAAGGATTACGTTATGATACGTTTAGATCT | + |
|
Preference number: 3 (lower is better) Translates to: SWNDRHMVTQRS*SQGLRYDTFRS Trigger: AGATCTAAACGTATCATAACGTAATCCTTGACTTCAACTCCTCTGAGTGACCATGTGGCGATCATTCCATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
||
| 3UTR-3UTR CAA 90 bp | ACTGATCATGTCTTATTTTTGCTAAGACTCACACATACTGACTTGTACACAGTGACTCTAAGTGGTAGTTaGAGACGAAATGAGTTTCCG | + |
|
Preference number: 3 (lower is better) Translates to: TDHVLFLLRLTHTDLYTVTLSGS*RRNEFP Trigger: CGGAAACTCATTTCGTCTCAAACTACCACTTAGAGT...CACTGTGTACAAGTCAGTATGTGTGAGTCTTAGCAAAAATAAGACATGATCAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
||
| 3UTR TCA 72 bp | ATAAATGCCATCCTACATAATCCTTTTCAAAGGGCTTaGAGTAAACTTAGAAGCAATGGGGTGCCTAATGAG | + |
|
Preference number: 3 (lower is better) Translates to: INAILHNPFQRA*SKLRSNGVPNE Trigger: CTCATTAGGCACCCCATTGCTTCTAAGTTTACTTCAAGCCCTTTGAAAAGGATTATGTAGGATGGCATTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
||
| 3UTR-3UTR CAA 90 bp | ACTGATCATGTCTTATTTTTGCTAAGACTCACACATACTGACTTGTACACAGTGGTCACTAATTGCTATTaGTCACCAGGAGGAAAAATG | + |
|
Preference number: 3 (lower is better) Translates to: TDHVLFLLRLTHTDLYTVVTNCY*SPGGKM Trigger: CATTTTTCCTCCTGGTGACAAATAGCAATTAGTGAC...CACTGTGTACAAGTCAGTATGTGTGAGTCTTAGCAAAAATAAGACATGATCAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
||
| 3UTR-3UTR CAA 90 bp | ACTGATCATGTCTTATTTTTGCTAAGACTCACACATACTGACTTGTACACAGTGAGGCTTTGCTCTTGTTaGAATCATCTGTCACTAATT | + |
|
Preference number: 3 (lower is better) Translates to: TDHVLFLLRLTHTDLYTVRLCSC*NHLSLI Trigger: AATTAGTGACAGATGATTCAAACAAGAGCAAAGCCT...CACTGTGTACAAGTCAGTATGTGTGAGTCTTAGCAAAAATAAGACATGATCAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
||
| 3UTR CAA 72 bp | TCAAGCCTCCTCTCAGGCCGGTTTCCCTTAAGAGCCTaGGCTTTGCTTGCCTGCCTGCCCACCCGCCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SSLLSGRFPLRA*ALLACLPTRLP Trigger: GGGCAGGCGGGTGGGCAGGCAGGCAAGCAAAGCCAAGGCTCTTAAGGGAAACCGGCCTGAGAGGAGGCTTGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
||
| CDS-3UTR CCA 90 bp | ACCCTGCCTGAGGCAACTTGCAGTGTGCAAAGGCCTGGCTGCCCACTTTCCCCTAGTGCGGGTAGCTGGTaGGGCATGGAGACTGCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TLPEATCSVQRPGCPLSPSAGSW*GMETAE Trigger: TTCCGCAGTCTCCATGCCCCACCAGCTACCCGCACT...AGGGGAAAGTGGGCAGCCAGGCCTTTGCACACTGCAAGTTGCCTCAGGCAGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
||
| CDS-3UTR TCA 90 bp | GCCTCTGTCTCCCTGCTGCTGAGATCAAAGGCAGGTACCACGGTACCACTACACACACGCGGCAGTAGATaGCGTGGGGCAGCCCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ASVSLLLRSKAGTTVPLHTRGSR*RGAAPF Trigger: GAAAGGGGCTGCCCCACGTCATCTACTGCCGCGTGT...GTGTAGTGGTACCGTGGTACCTGCCTTTGATCTCAGCAGCAGGGAGACAGAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
||
| CDS-3UTR TCA 90 bp | GCCTCTGTCTCCCTGCTGCTGAGATCAAAGGCAGGTACCACGGTACCACTACACACTTGGCCAGGAGGCTaGGCTGAGGGTTGTACTCGC | + |
|
Preference number: 4 (lower is better) Translates to: ASVSLLLRSKAGTTVPLHTWPGG*AEGCTR Trigger: GCGAGTACAACCCTCAGCTCAGCCTCCTGGCCAAGT...GTGTAGTGGTACCGTGGTACCTGCCTTTGATCTCAGCAGCAGGGAGACAGAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
||
| CDS-3UTR TCA 90 bp | ACCCTGCCTGAGGCAACTTGCAGTGTGCAAAGGCCTGGCTGCCCACTTTCCCCTTTGATAGGGACTGTCTaGCTCGGAAGGACTTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: TLPEATCSVQRPGCPLSPLIGTV*LGRTSG Trigger: CCCGGAAGTCCTTCCGAGTCAGACAGTCCCTATCAA...AGGGGAAAGTGGGCAGCCAGGCCTTTGCACACTGCAAGTTGCCTCAGGCAGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
||
| CDS-3UTR TCA 90 bp | ACCCTGCCTGAGGCAACTTGCAGTGTGCAAAGGCCTGGCTGCCCACTTTCCCCTTGTGGGGAGCCCATCTaGGTGAGCACCTTATCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: TLPEATCSVQRPGCPLSPCGEPI*VSTLSN Trigger: GTTGGATAAGGTGCTCACTCAGATGGGCTCCCCACA...AGGGGAAAGTGGGCAGCCAGGCCTTTGCACACTGCAAGTTGCCTCAGGCAGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
||
| CDS-3UTR GCA 90 bp | ACCCTGCCTGAGGCAACTTGCAGTGTGCAAAGGCCTGGCTGCCCACTTTCCCCTATGCAGACCTCCTTCTaGTTGGAGCCGAACGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: TLPEATCSVQRPGCPLSPMQTSF*LEPNGN Trigger: GTTCCCGTTCGGCTCCAAGCAGAAGGAGGTCTGCAT...AGGGGAAAGTGGGCAGCCAGGCCTTTGCACACTGCAAGTTGCCTCAGGCAGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
||
| CDS-3UTR GCA 90 bp | ACCCTGCCTGAGGCAACTTGCAGTGTGCAAAGGCCTGGCTGCCCACTTTCCCCTAGCCGTGCTGGTAGTTaGAGTTCCGGCTCTGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: TLPEATCSVQRPGCPLSPSRAGS*SSGSGQ Trigger: TTGTCCAGAGCCGGAACTGCAACTACCAGCACGGCT...AGGGGAAAGTGGGCAGCCAGGCCTTTGCACACTGCAAGTTGCCTCAGGCAGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
||
| CDS-3UTR CCA 90 bp | TGTAGTGTGCACAGGGCAGGCAGCCATCTGCAAGGTCAGACAGGAGGGACGGGAAGACCTCCTTCTGCTTaGAGCCGAACGGGAACTCAC | + |
|
Preference number: 4 (lower is better) Translates to: CSVHRAGSHLQGQTGGTGRPPSA*SRTGTH Trigger: GTGAGTTCCCGTTCGGCTCCAAGCAGAAGGAGGTCT...TCCCGTCCCTCCTGTCTGACCTTGCAGATGGCTGCCTGCCCTGTGCACACTACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
||
| CDS-3UTR GCA 90 bp | ACCCTGCCTGAGGCAACTTGCAGTGTGCAAAGGCCTGGCTGCCCACTTTCCCCTCTGGCGATGATACTCTaGTCCCCAGCCCTTCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: TLPEATCSVQRPGCPLSPLAMIL*SPALHK Trigger: TTTGTGAAGGGCTGGGGAGCAGAGTATCATCGCCAG...AGGGGAAAGTGGGCAGCCAGGCCTTTGCACACTGCAAGTTGCCTCAGGCAGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
||
| CDS-3UTR CCA 90 bp | ACCCTGCCTGAGGCAACTTGCAGTGTGCAAAGGCCTGGCTGCCCACTTTCCCCTAGAGATAGGGTTGTGTaGGGAGCCCATCTGAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TLPEATCSVQRPGCPLSPRDRVV*GAHLSE Trigger: CTCACTCAGATGGGCTCCCCACACAACCCTATCTCT...AGGGGAAAGTGGGCAGCCAGGCCTTTGCACACTGCAAGTTGCCTCAGGCAGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
||
| CDS-3UTR GCA 90 bp | CCTTGCAAAGTTCGGCTCTTGACTCTAGCAGGTAAGACGATGTGGAATGCATGGAGCCGCTGGGGATCTTaGAGACGGTGGCCGGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PCKVRLLTLAGKTMWNAWSRWGS*RRWPGG Trigger: TCCACCCGGCCACCGTCTGCAAGATCCCCAGCGGCT...CCATGCATTCCACATCGTCTTACCTGCTAGAGTCAAGAGCCGAACTTTGCAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
||
| CDS-3UTR CCA 90 bp | ATCAAGCCTCCTCTCAGGCCGGTTTCCCTTAAGAGCCTTGGCTTTGCTTGCCTGGTAGCTGGTGGGGCATaGAGACTGCGGAAACACATG | + |
|
Preference number: 4 (lower is better) Translates to: IKPPLRPVSLKSLGFACLVAGGA*RLRKHM Trigger: CATGTGTTTCCGCAGTCTCCATGCCCCACCAGCTAC...CAGGCAAGCAAAGCCAAGGCTCTTAAGGGAAACCGGCCTGAGAGGAGGCTTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
||
| CDS-3UTR GCA 90 bp | CCTTGCAAAGTTCGGCTCTTGACTCTAGCAGGTAAGACGATGTGGAATGCATGGCAGCAGCCGCTTCACTaGGGGGCTGGTGAAGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PCKVRLLTLAGKTMWNAWQQPLH*GAGEGE Trigger: TTCTCCTTCACCAGCCCCGCAGTGAAGCGGCTGCTG...CCATGCATTCCACATCGTCTTACCTGCTAGAGTCAAGAGCCGAACTTTGCAAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
||
| 3UTR CAA 72 bp | AGCACTCGGGAGGCAGAGGCAAGCAGATTTCTGAGTTaGAGGCCAGCCTGTTCTACAAAGCGAGTTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: STREAEASRFLS*RPACSTKRVPG Trigger: TCCTGGAACTCGCTTTGTAGAACAGGCTGGCCTCAAACTCAGAAATCTGCTTGCCTCTGCCTCCCGAGTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
||
| CDS-3UTR TCA 90 bp | CCTTGCAAAGTTCGGCTCTTGACTCTAGCAGGTAAGACGATGTGGAATGCATGGAAGGGCTTCAGCTCATaGTGGGACTGCAGGTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PCKVRLLTLAGKTMWNAWKGFSS*WDCRSG Trigger: GCCAGACCTGCAGTCCCATCATGAGCTGAAGCCCTT...CCATGCATTCCACATCGTCTTACCTGCTAGAGTCAAGAGCCGAACTTTGCAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
||
| CDS-3UTR GCA 90 bp | TATCATTGTCTAGCACAGACTACCAAAGTGTGGTGTGTGGCATTTCAGGAAGGCTCCTCTTCATCTCCCTaGTTCCAGCCCAGCAGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: YHCLAQTTKVWCVAFQEGSSSSP*FQPSSR Trigger: GCGGCTGCTGGGCTGGAAGCAGGGAGATGAAGAGGA...GCCTTCCTGAAATGCCACACACCACACTTTGGTAGTCTGTGCTAGACAATGATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
||
| CDS-3UTR GCA 90 bp | ATCAAGCCTCCTCTCAGGCCGGTTTCCCTTAAGAGCCTTGGCTTTGCTTGCCTGAGCTCATCCGAATCGTaGACATCTTCGTCAGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: IKPPLRPVSLKSLGFACLSSSES*TSSSAH Trigger: ATGAGCTGACGAAGATGTGCACGATTCGGATGAGCT...CAGGCAAGCAAAGCCAAGGCTCTTAAGGGAAACCGGCCTGAGAGGAGGCTTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
||
| CDS-3UTR CCA 90 bp | GTTCGGCTCTTGACTCTAGCAGGTAAGACGATGTGGAATGCATGGTATATTTTAATGGGACTGCAGGTCTaGCCAGCGCCACACGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VRLLTLAGKTMWNAWYILMGLQV*PAPHAA Trigger: TGCCGCGTGTGGCGCTGGCCAGACCTGCAGTCCCAT...TAAAATATACCATGCATTCCACATCGTCTTACCTGCTAGAGTCAAGAGCCGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| CDS-3UTR CCA 90 bp | CCTTGCAAAGTTCGGCTCTTGACTCTAGCAGGTAAGACGATGTGGAATGCATGGGTACTCGCTGTGTCTTaGTACCAGCACTGGAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: PCKVRLLTLAGKTMWNAWVLAVS*YQHWRQ Trigger: CTGCCTCCAGTGCTGGTACCAAGACACAGCGAGTAC...CCATGCATTCCACATCGTCTTACCTGCTAGAGTCAAGAGCCGAACTTTGCAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| CDS-3UTR GCA 90 bp | ATCAAGCCTCCTCTCAGGCCGGTTTCCCTTAAGAGCCTTGGCTTTGCTTGCCTGACACCCTTTCCAATGTaGCTCCTGGTGTTTTCTATG | + |
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Preference number: 4 (lower is better) Translates to: IKPPLRPVSLKSLGFACLTPFPM*LLVFSM Trigger: CATAGAAAACACCAGGAGGCACATTGGAAAGGGTGT...CAGGCAAGCAAAGCCAAGGCTCTTAAGGGAAACCGGCCTGAGAGGAGGCTTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| CDS-3UTR CCA 90 bp | TATCATTGTCTAGCACAGACTACCAAAGTGTGGTGTGTGGCATTTCAGGAAGGCCACTGGAGGCAGAACTaGGGTCTCCACTCTGCGGTA | + |
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Preference number: 4 (lower is better) Translates to: YHCLAQTTKVWCVAFQEGHWRQN*GLHSAV Trigger: TACCGCAGAGTGGAGACCCCAGTTCTGCCTCCAGTG...GCCTTCCTGAAATGCCACACACCACACTTTGGTAGTCTGTGCTAGACAATGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| CDS-3UTR CCA 90 bp | CCTTGCAAAGTTCGGCTCTTGACTCTAGCAGGTAAGACGATGTGGAATGCATGGAGCTGGGCGAAGAGCTaGTTGTTGAAGACCTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: PCKVRLLTLAGKTMWNAWSWAKS*LLKTLR Trigger: CCTCAAGGTCTTCAACAACCAGCTCTTCGCCCAGCT...CCATGCATTCCACATCGTCTTACCTGCTAGAGTCAAGAGCCGAACTTTGCAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| CDS-3UTR TCA 90 bp | TATCATTGTCTAGCACAGACTACCAAAGTGTGGTGTGTGGCATTTCAGGAAGGCCACTGCAGCGGTCCATaGAGATGGATCTCGATCCAG | + |
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Preference number: 4 (lower is better) Translates to: YHCLAQTTKVWCVAFQEGHCSGP*RWISIQ Trigger: CTGGATCGAGATCCATCTTCATGGACCGCTGCAGTG...GCCTTCCTGAAATGCCACACACCACACTTTGGTAGTCTGTGCTAGACAATGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| CDS-3UTR GCA 90 bp | GTTCGGCTCTTGACTCTAGCAGGTAAGACGATGTGGAATGCATGGTATATTTTAGTGGGGCATGGAGACTaGGGAAACACATGGCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: VRLLTLAGKTMWNAWYILVGHGD*GNTWPG Trigger: GCCAGGCCATGTGTTTCCGCAGTCTCCATGCCCCAC...TAAAATATACCATGCATTCCACATCGTCTTACCTGCTAGAGTCAAGAGCCGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| CDS-3UTR GCA 90 bp | TATCATTGTCTAGCACAGACTACCAAAGTGTGGTGTGTGGCATTTCAGGAAGGCTCTGGACAAAGATGCTaGTGTCGCTCACGCACTCCG | + |
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Preference number: 4 (lower is better) Translates to: YHCLAQTTKVWCVAFQEGSGQRC*CRSRTP Trigger: CGGAGTGCGTGAGCGACAGCAGCATCTTTGTCCAGA...GCCTTCCTGAAATGCCACACACCACACTTTGGTAGTCTGTGCTAGACAATGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| CDS-3UTR GCA 90 bp | ACTGATCATGTCTTATTTTTGCTAAGACTCACACATACTGACTTGTACACAGTGACTTCAAAGCCGTGGTaGACGGACTGGGCGAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: TDHVLFLLRLTHTDLYTVTSKPW*TDWASS Trigger: GCTGCTCGCCCAGTCCGTGCACCACGGCTTTGAAGT...CACTGTGTACAAGTCAGTATGTGTGAGTCTTAGCAAAAATAAGACATGATCAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| CDS-3UTR CCA 90 bp | ACTGATCATGTCTTATTTTTGCTAAGACTCACACATACTGACTTGTACACAGTGGACTGGGCGAGCAGCTaGGCGAAGAGCTGGTTGTTG | + |
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Preference number: 4 (lower is better) Translates to: TDHVLFLLRLTHTDLYTVDWASS*AKSWLL Trigger: CAACAACCAGCTCTTCGCCCAGCTGCTCGCCCAGTC...CACTGTGTACAAGTCAGTATGTGTGAGTCTTAGCAAAAATAAGACATGATCAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| CDS-3UTR CCA 90 bp | ACTGATCATGTCTTATTTTTGCTAAGACTCACACATACTGACTTGTACACAGTGACCACTTCAAAGCCGTaGTGCACGGACTGGGCGAGC | + |
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Preference number: 4 (lower is better) Translates to: TDHVLFLLRLTHTDLYTVTTSKP*CTDWAS Trigger: GCTCGCCCAGTCCGTGCACCACGGCTTTGAAGTGGT...CACTGTGTACAAGTCAGTATGTGTGAGTCTTAGCAAAAATAAGACATGATCAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| CDS-3UTR CCA 90 bp | TATCATTGTCTAGCACAGACTACCAAAGTGTGGTGTGTGGCATTTCAGGAAGGCTTCCAATGTGCCTCCTaGTGTTTTCTATGGTCGAGT | + |
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Preference number: 4 (lower is better) Translates to: YHCLAQTTKVWCVAFQEGFQCAS*CFLWSS Trigger: ACTCGACCATAGAAAACACCAGGAGGCACATTGGAA...GCCTTCCTGAAATGCCACACACCACACTTTGGTAGTCTGTGCTAGACAATGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| CDS-3UTR CCA 90 bp | ACTGATCATGTCTTATTTTTGCTAAGACTCACACATACTGACTTGTACACAGTGTCTTGGTACCAGCACTaGAGGCAGAACTGGGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: TDHVLFLLRLTHTDLYTVSWYQH*RQNWGL Trigger: GAGACCCCAGTTCTGCCTCCAGTGCTGGTACCAAGA...CACTGTGTACAAGTCAGTATGTGTGAGTCTTAGCAAAAATAAGACATGATCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| 3UTR CAA 72 bp | TTGCTCTTGTTTGAATCATCTGTCACTAATTGCTATTaGTCACCAGGAGGAAAAATGAGGCAAGGGATGCCC | + |
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Preference number: 4 (lower is better) Translates to: LLLFESSVTNCY*SPGGKMRQGMP Trigger: GGGCATCCCTTGCCTCATTTTTCCTCCTGGTGACAAATAGCAATTAGTGACAGATGATTCAAACAAGAGCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| 3UTR CAA 72 bp | AAGATGCCTCGAGCTTTCCCAAGGCTTTGCTCTTGTTaGAATCATCTGTCACTAATTGCTATTTGTCACCAG | + |
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Preference number: 4 (lower is better) Translates to: KMPRAFPRLCSC*NHLSLIAICHQ Trigger: CTGGTGACAAATAGCAATTAGTGACAGATGATTCAAACAAGAGCAAAGCCTTGGGAAAGCTCGAGGCATCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| CDS-3UTR TCA 90 bp | ACTGATCATGTCTTATTTTTGCTAAGACTCACACATACTGACTTGTACACAGTGGGTAATGGTATGGGTTaGTGCAGACCTCCTTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: TDHVLFLLRLTHTDLYTVGNGMG*CRPPSA Trigger: AGCAGAAGGAGGTCTGCATCAACCCATACCATTACC...CACTGTGTACAAGTCAGTATGTGTGAGTCTTAGCAAAAATAAGACATGATCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| 3UTR CAA 72 bp | TCCAAAGATGCCTCGAGCTTTCCCAAGGCTTTGCTCTaGTTTGAATCATCTGTCACTAATTGCTATTTGTCA | + |
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Preference number: 4 (lower is better) Translates to: SKDASSFPKALL*FESSVTNCYLS Trigger: TGACAAATAGCAATTAGTGACAGATGATTCAAACAAGAGCAAAGCCTTGGGAAAGCTCGAGGCATCTTTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| 3UTR CAA 72 bp | CATGTCTTATTTTTGCTAAGACTCACACATACTGACTaGTACACAGTGATAAACATTCTGGGTCTTGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: HVLFLLRLTHTD*YTVINILGLVG Trigger: GCCCACAAGACCCAGAATGTTTATCACTGTGTACAAGTCAGTATGTGTGAGTCTTAGCAAAAATAAGACATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| CDS CCA 90 bp | GACTGTCTGACTCGGAAGGACTTCCGGGGGAGTGCGGGTAGCTGGTaGGGCATGGAGACTGCGGAAACACATGGCCTGGCGAGGAGGGCG | + |
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Preference number: 5 (lower is better) Translates to: DCLTRKDFRGSAGSW*GMETAETHGLARRA Trigger: CGCCCTCCTCGCCAGGCCATGTGTTTCCGCAGTCTCCATGCCCCACCAGCTACCCGCACTCCCCCGGAAGTCCTTCCGAGTCAGACAGTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| CDS CCA 90 bp | GTGCGGGTAGCTGGTGGGGCATGGAGACTGCGGAAACACATGGCCTaGCGAGGAGGGCGGTGCCGGACAGAGAGACTGCTGGAAAGAGTC | + |
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Preference number: 5 (lower is better) Translates to: VRVAGGAWRLRKHMA*RGGRCRTERLLERV Trigger: GACTCTTTCCAGCAGTCTCTCTGTCCGGCACCGCCCTCCTCGCCAGGCCATGTGTTTCCGCAGTCTCCATGCCCCACCAGCTACCCGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| CDS CCA 90 bp | AGGGACTGTCTGACTCGGAAGGACTTCCGGGGGAGTGCGGGTAGCTaGTGGGGCATGGAGACTGCGGAAACACATGGCCTGGCGAGGAGG | + |
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Preference number: 5 (lower is better) Translates to: RDCLTRKDFRGSAGS*WGMETAETHGLARR Trigger: CCTCCTCGCCAGGCCATGTGTTTCCGCAGTCTCCATGCCCCACCAGCTACCCGCACTCCCCCGGAAGTCCTTCCGAGTCAGACAGTCCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| CDS TCA 90 bp | AGAGAGACTGCTGGAAAGAGTCAGGGTAGGTGGCGTTGTGCGGCATaGGGGGTTCGCTGTGCAGCGAGGCACTTCGGAACTTGGCCAGGA | + |
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Preference number: 5 (lower is better) Translates to: RETAGKSQGRWRCAA*GVRCAARHFGTWPG Trigger: TCCTGGCCAAGTTCCGAAGTGCCTCGCTGCACAGCGAACCCCTCATGCCGCACAACGCCACCTACCCTGACTCTTTCCAGCAGTCTCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| CDS-3UTR CAA 90 bp | ACCCTGCCTGAGGCAACTTGCAGTGTGCAAAGGCCTGGCTGCCCACTTTCCCCTTGGGCGAAGAGCTGGTaGTTGAAGACCTTGAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: TLPEATCSVQRPGCPLSPWAKSW*LKTLRL Trigger: CAGCCTCAAGGTCTTCAACAACCAGCTCTTCGCCCA...AGGGGAAAGTGGGCAGCCAGGCCTTTGCACACTGCAAGTTGCCTCAGGCAGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| CDS CCA 90 bp | CGAATCGTGCACATCTTCGTCAGCTCATACACCACTTCAAAGCCGTaGTGCACGGACTGGGCGAGCAGCTGGGCGAAGAGCTGGTTGTTG | + |
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Preference number: 5 (lower is better) Translates to: RIVHIFVSSYTTSKP*CTDWASSWAKSWLL Trigger: CAACAACCAGCTCTTCGCCCAGCTGCTCGCCCAGTCCGTGCACCACGGCTTTGAAGTGGTGTATGAGCTGACGAAGATGTGCACGATTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| CDS-3UTR CAA 90 bp | CCTTGCAAAGTTCGGCTCTTGACTCTAGCAGGTAAGACGATGTGGAATGCATGGGCGAAGAGCTGGTTGTaGAAGACCTTGAGGCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: PCKVRLLTLAGKTMWNAWAKSWL*KTLRLQ Trigger: CTGCAGCCTCAAGGTCTTCAACAACCAGCTCTTCGC...CCATGCATTCCACATCGTCTTACCTGCTAGAGTCAAGAGCCGAACTTTGCAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| CDS-3UTR CAA 90 bp | TATCATTGTCTAGCACAGACTACCAAAGTGTGGTGTGTGGCATTTCAGGAAGGCTGTACTCGCTGTGTCTaGGTACCAGCACTGGAGGCA | + |
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Preference number: 5 (lower is better) Translates to: YHCLAQTTKVWCVAFQEGCTRCV*VPALEA Trigger: TGCCTCCAGTGCTGGTACCAAGACACAGCGAGTACA...GCCTTCCTGAAATGCCACACACCACACTTTGGTAGTCTGTGCTAGACAATGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| CDS-3UTR CAA 90 bp | ACTGATCATGTCTTATTTTTGCTAAGACTCACACATACTGACTTGTACACAGTGCAGACCTCCTTCTGCTaGGAGCCGAACGGGAACTCA | + |
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Preference number: 5 (lower is better) Translates to: TDHVLFLLRLTHTDLYTVQTSFC*EPNGNS Trigger: TGAGTTCCCGTTCGGCTCCAAGCAGAAGGAGGTCTG...CACTGTGTACAAGTCAGTATGTGTGAGTCTTAGCAAAAATAAGACATGATCAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| CDS-3UTR CAA 90 bp | ACTGATCATGTCTTATTTTTGCTAAGACTCACACATACTGACTTGTACACAGTGAACCTATTCCTGTTATaGGAAGGGTCGGTGAAGCCG | + |
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Preference number: 5 (lower is better) Translates to: TDHVLFLLRLTHTDLYTVNLFLL*EGSVKP Trigger: CGGCTTCACCGACCCTTCCAATAACAGGAATAGGTT...CACTGTGTACAAGTCAGTATGTGTGAGTCTTAGCAAAAATAAGACATGATCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| CDS CCA 72 bp | AGGACTTCCGGGGGAGTGCGGGTAGCTGGTGGGGCATaGAGACTGCGGAAACACATGGCCTGGCGAGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: RTSGGVRVAGGA*RLRKHMAWRGG Trigger: CCCTCCTCGCCAGGCCATGTGTTTCCGCAGTCTCCATGCCCCACCAGCTACCCGCACTCCCCCGGAAGTCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| CDS CCA 72 bp | ACTCGGAAGGACTTCCGGGGGAGTGCGGGTAGCTGGTaGGGCATGGAGACTGCGGAAACACATGGCCTGGCG | + |
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Preference number: 6 (lower is better) Translates to: TRKDFRGSAGSW*GMETAETHGLA Trigger: CGCCAGGCCATGTGTTTCCGCAGTCTCCATGCCCCACCAGCTACCCGCACTCCCCCGGAAGTCCTTCCGAGT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| CDS CCA 72 bp | CTGACTCGGAAGGACTTCCGGGGGAGTGCGGGTAGCTaGTGGGGCATGGAGACTGCGGAAACACATGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: LTRKDFRGSAGS*WGMETAETHGL Trigger: CAGGCCATGTGTTTCCGCAGTCTCCATGCCCCACCAGCTACCCGCACTCCCCCGGAAGTCCTTCCGAGTCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| CDS TCA 72 bp | GCTGGAAAGAGTCAGGGTAGGTGGCGTTGTGCGGCATaGGGGGTTCGCTGTGCAGCGAGGCACTTCGGAACT | + |
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Preference number: 6 (lower is better) Translates to: AGKSQGRWRCAA*GVRCAARHFGT Trigger: AGTTCCGAAGTGCCTCGCTGCACAGCGAACCCCTCATGCCGCACAACGCCACCTACCCTGACTCTTTCCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| CDS GCA 72 bp | ATCTTCGTCAGCTCATACACCACTTCAAAGCCGTGGTaGACGGACTGGGCGAGCAGCTGGGCGAAGAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: IFVSSYTTSKPW*TDWASSWAKSW Trigger: CCAGCTCTTCGCCCAGCTGCTCGCCCAGTCCGTGCACCACGGCTTTGAAGTGGTGTATGAGCTGACGAAGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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| CDS CCA 72 bp | CACATCTTCGTCAGCTCATACACCACTTCAAAGCCGTaGTGCACGGACTGGGCGAGCAGCTGGGCGAAGAGC | + |
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Preference number: 6 (lower is better) Translates to: HIFVSSYTTSKP*CTDWASSWAKS Trigger: GCTCTTCGCCCAGCTGCTCGCCCAGTCCGTGCACCACGGCTTTGAAGTGGTGTATGAGCTGACGAAGATGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029371.3 |
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