Pregenerated sensors for SMAD7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025880Ensembl transcript IDs: ENSMUST00000026999.10, ENSMUST00000168918.8, ENSMUST00000174411.2, ENSMUST00000174843.8
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAAACCACCACGGCTGGGACCCGGTGGAAGGGCCTGAGAGGGTACTaGGGTAGCAATACTGTGACTGGGGCTGTCCCGGCAGCCCTTGGG | + |
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Preference number: 1 (lower is better) Translates to: KTTTAGTRWKGLRGY*GSNTVTGAVPAALG Trigger: CCCAAGGGCTGCCGGGACAGCCCCAGTCACAGTATTGCTACCCCAGTACCCTCTCAGGCCCTTCCACCGGGTCCCAGCCGTGGTGGTTTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 |
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| 3UTR GCA 90 bp | GAGCAGAGCTTGGCACCTGCTGCCAGTCTGCCCAGGTACTGCCTCTaGCCCACCGAGCGTGTCCAAAAGGCTAGAGAGACACACAGCTTG | + |
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Preference number: 1 (lower is better) Translates to: EQSLAPAASLPRYCL*PTERVQKARETHSL Trigger: CAAGCTGTGTGTCTCTCTAGCCTTTTGGACACGCTCGGTGGGGCAGAGGCAGTACCTGGGCAGACTGGCAGCAGGTGCCAAGCTCTGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026999.10 |
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| 3UTR TCA 90 bp | ACCGAGCGTGTCCAAAAGGCTAGAGAGACACACAGCTTGGCACTATaGGCCTCTCAGCCGGGGGCATCCATAAAGAACACACACACAAAA | + |
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Preference number: 1 (lower is better) Translates to: TERVQKARETHSLAL*ASQPGASIKNTHTK Trigger: TTTTGTGTGTGTGTTCTTTATGGATGCCCCCGGCTGAGAGGCTCATAGTGCCAAGCTGTGTGTCTCTCTAGCCTTTTGGACACGCTCGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026999.10 |
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| 3UTR-3UTR GCA 90 bp | CGGTGGAAGGGCCTGAGAGGGTACTGGGGTAGCAATACTGTGACTGGGGCTGTCCACCTGCTGCCAGTCTaGCCAGGTACTGCCTCTGCC | + |
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Preference number: 2 (lower is better) Translates to: RWKGLRGYWGSNTVTGAVHLLPV*PGTASA Trigger: GGCAGAGGCAGTACCTGGGCAGACTGGCAGCAGGTG...GACAGCCCCAGTCACAGTATTGCTACCCCAGTACCCTCTCAGGCCCTTCCACCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026999.10 |
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| 3UTR-3UTR CCA 90 bp | TTCGGCAGGCTGGAGCAGAGCTTGGCACCTGCTGCCAGTCTGCCCAGGTACTGCGATCCAAAGGGAAGGTaGTGCCCACTTTCACACACC | + |
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Preference number: 2 (lower is better) Translates to: FGRLEQSLAPAASLPRYCDPKGR*CPLSHT Trigger: GGTGTGTGAAAGTGGGCACCACCTTCCCTTTGGATC...GCAGTACCTGGGCAGACTGGCAGCAGGTGCCAAGCTCTGCTCCAGCCTGCCGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026999.10 |
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| 3UTR-3UTR CCA 90 bp | TTCGGCAGGCTGGAGCAGAGCTTGGCACCTGCTGCCAGTCTGCCCAGGTACTGCGAGAGACACACAGCTTaGCACTATGAGCCTCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: FGRLEQSLAPAASLPRYCERHTA*HYEPLS Trigger: GCTGAGAGGCTCATAGTGCCAAGCTGTGTGTCTCTC...GCAGTACCTGGGCAGACTGGCAGCAGGTGCCAAGCTCTGCTCCAGCCTGCCGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026999.10 |
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| 3UTR CAA 90 bp | GCAGGCTGGCTTCTCAGAAGCCGGGAAAGGTTAGCAGCAAGTAGTTaGAACGGTGGCCTGCTCGGCTCACGATCCGCCCTGTCCTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: AGWLLRSRERLAASS*NGGLLGSRSALSSS Trigger: AGAAGAGGACAGGGCGGATCGTGAGCCGAGCAGGCCACCGTTCAAACTACTTGCTGCTAACCTTTCCCGGCTTCTGAGAAGCCAGCCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168918.8 |
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| 3UTR-3UTR CCA 90 bp | CGGTGGAAGGGCCTGAGAGGGTACTGGGGTAGCAATACTGTGACTGGGGCTGTCAGCCTTCTAGCAGGCTaGCTTCTCAGAAGCCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: RWKGLRGYWGSNTVTGAVSLLAG*LLRSLW Trigger: CCACAGGCTTCTGAGAAGCCAGCCTGCTAGAAGGCT...GACAGCCCCAGTCACAGTATTGCTACCCCAGTACCCTCTCAGGCCCTTCCACCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026999.10 |
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| 3UTR-3UTR CCA 90 bp | GCCAAGGGATGGTACCTTTGTTGTGACGGGGCTACACCCTTCTCAGCAGGAAGGAGACAGACTCGACAATaGCAGCGGGTGACAGGCGGC | + |
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Preference number: 2 (lower is better) Translates to: AKGWYLCCDGATPFSAGRRQTRQ*QRVTGG Trigger: GCCGCCTGTCACCCGCTGCCATTGTCGAGTCTGTCT...CCTTCCTGCTGAGAAGGGTGTAGCCCCGTCACAACAAAGGTACCATCCCTTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 |
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| 3UTR-3UTR TCA 90 bp | AGTGTCAAAGTATCATACGAGCGAGCGTATGAGCTGAGAGAAGGGCTGGGAGCCCACAGCTTGGCACTATaGGCCTCTCAGCCGGGGGCA | + |
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Preference number: 2 (lower is better) Translates to: SVKVSYERAYELREGLGAHSLAL*ASQPGA Trigger: TGCCCCCGGCTGAGAGGCTCATAGTGCCAAGCTGTG...GGCTCCCAGCCCTTCTCTCAGCTCATACGCTCGCTCGTATGATACTTTGACACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026999.10 |
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| 3UTR-3UTR TCA 90 bp | GCCAAGGGATGGTACCTTTGTTGTGACGGGGCTACACCCTTCTCAGCAGGAAGGTGGGGGATGGGGTGCTaGGCTGACTTTCCACATCTG | + |
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Preference number: 2 (lower is better) Translates to: AKGWYLCCDGATPFSAGRWGMGC*ADFPHL Trigger: CAGATGTGGAAAGTCAGCTCAGCACCCCATCCCCCA...CCTTCCTGCTGAGAAGGGTGTAGCCCCGTCACAACAAAGGTACCATCCCTTGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGGGACCCGGTGGAAGGGCCTGAGAGGGTACTGGGGTAGCAATACTGTGACTCCAAAGGGAAGGTGGTaGCCACTTTCACACACCATG | + |
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Preference number: 2 (lower is better) Translates to: AGTRWKGLRGYWGSNTVTPKGRW*PLSHTM Trigger: CATGGTGTGTGAAAGTGGGCACCACCTTCCCTTTGG...AGTCACAGTATTGCTACCCCAGTACCCTCTCAGGCCCTTCCACCGGGTCCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026999.10 |
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| 3UTR-3UTR TCA 90 bp | GCCAAGGGATGGTACCTTTGTTGTGACGGGGCTACACCCTTCTCAGCAGGAAGGAGCGGGACACACGGATaGCGAGAAAGGAGGAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: AKGWYLCCDGATPFSAGRSGTHG*RERRRK Trigger: TTTCCTCCTCCTTTCTCGTCATCCGTGTGTCCCGCT...CCTTCCTGCTGAGAAGGGTGTAGCCCCGTCACAACAAAGGTACCATCCCTTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026999.10 |
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| 3UTR-3UTR GCA 90 bp | GCTGGGACCCGGTGGAAGGGCCTGAGAGGGTACTGGGGTAGCAATACTGTGACTCACTTTCACACACCATaGTTGGCAGTGCTGACTCTC | + |
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Preference number: 2 (lower is better) Translates to: AGTRWKGLRGYWGSNTVTHFHTP*LAVLTL Trigger: GAGAGTCAGCACTGCCAAGCATGGTGTGTGAAAGTG...AGTCACAGTATTGCTACCCCAGTACCCTCTCAGGCCCTTCCACCGGGTCCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026999.10 |
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| 3UTR-3UTR GCA 90 bp | AAGAACAGTGTCAAAGTATCATACGAGCGAGCGTATGAGCTGAGAGAAGGGCTGAGTCTGCCCAGGTACTaGCTCTGCCCCACCGAGCGT | + |
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Preference number: 2 (lower is better) Translates to: KNSVKVSYERAYELREGLSLPRY*LCPTER Trigger: ACGCTCGGTGGGGCAGAGGCAGTACCTGGGCAGACT...CAGCCCTTCTCTCAGCTCATACGCTCGCTCGTATGATACTTTGACACTGTTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026999.10 |
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| 3UTR-3UTR CCA 90 bp | AGTGTCAAAGTATCATACGAGCGAGCGTATGAGCTGAGAGAAGGGCTGGGAGCCGAAAACAATTGGTTCTaGTTCAGCCTTCTAGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: SVKVSYERAYELREGLGAENNWF*FSLLAG Trigger: GCCTGCTAGAAGGCTGAACCAGAACCAATTGTTTTC...GGCTCCCAGCCCTTCTCTCAGCTCATACGCTCGCTCGTATGATACTTTGACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026999.10 |
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| 3UTR-3UTR CCA 90 bp | AGTGTCAAAGTATCATACGAGCGAGCGTATGAGCTGAGAGAAGGGCTGGGAGCCCTGACTTTCCACATCTaGGAGAAACCTGATGAAAAA | + |
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Preference number: 2 (lower is better) Translates to: SVKVSYERAYELREGLGALTFHI*EKPDEK Trigger: TTTTTCATCAGGTTTCTCCCAGATGTGGAAAGTCAG...GGCTCCCAGCCCTTCTCTCAGCTCATACGCTCGCTCGTATGATACTTTGACACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026999.10 |
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| 3UTR-3UTR TCA 90 bp | AATCCGCACCATAAGCTAATTTCTCAAAGAACAAGACAAGCGGGACACACGGATACCAAAGAGTTTGCATaGAAAGCAATCACTCGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: NPHHKLISQRTRQAGHTDTKEFA*KAITRE Trigger: TTCCCGAGTGATTGCTTTTCATGCAAACTCTTTGGT...ATCCGTGTGTCCCGCTTGTCTTGTTCTTTGAGAAATTAGCTTATGGTGCGGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026999.10 |
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| 3UTR GCA 72 bp | GCAGGCTGGAGCAGAGCTTGGCACCTGCTGCCAGTCTaGCCAGGTACTGCCTCTGCCCCACCGAGCGTGTCC | + |
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Preference number: 3 (lower is better) Translates to: AGWSRAWHLLPV*PGTASAPPSVS Trigger: GGACACGCTCGGTGGGGCAGAGGCAGTACCTGGGCAGACTGGCAGCAGGTGCCAAGCTCTGCTCCAGCCTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026999.10 |
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| 3UTR GCA 72 bp | GGGCAGCTTCGGCAGGCTGGAGCAGAGCTTGGCACCTaGTGCCAGTCTGCCCAGGTACTGCCTCTGCCCCAC | + |
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Preference number: 3 (lower is better) Translates to: GQLRQAGAELGT*CQSAQVLPLPH Trigger: GTGGGGCAGAGGCAGTACCTGGGCAGACTGGCAGCAGGTGCCAAGCTCTGCTCCAGCCTGCCGAAGCTGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026999.10 |
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| 3UTR CCA 72 bp | ACGGCTGGGACCCGGTGGAAGGGCCTGAGAGGGTACTaGGGTAGCAATACTGTGACTGGGGCTGTCCCGGCA | + |
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Preference number: 3 (lower is better) Translates to: TAGTRWKGLRGY*GSNTVTGAVPA Trigger: TGCCGGGACAGCCCCAGTCACAGTATTGCTACCCCAGTACCCTCTCAGGCCCTTCCACCGGGTCCCAGCCGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 |
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| 3UTR-3UTR CAA 90 bp | GCTGGGACCCGGTGGAAGGGCCTGAGAGGGTACTGGGGTAGCAATACTGTGACTAGGCTGGAGCAGAGCTaGGCACCTGCTGCCAGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: AGTRWKGLRGYWGSNTVTRLEQS*APAASL Trigger: CAGACTGGCAGCAGGTGCCAAGCTCTGCTCCAGCCT...AGTCACAGTATTGCTACCCCAGTACCCTCTCAGGCCCTTCCACCGGGTCCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026999.10 |
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| 3UTR GCA 72 bp | TTGGCACCTGCTGCCAGTCTGCCCAGGTACTGCCTCTaGCCCACCGAGCGTGTCCAAAAGGCTAGAGAGACA | + |
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Preference number: 3 (lower is better) Translates to: LAPAASLPRYCL*PTERVQKARET Trigger: TGTCTCTCTAGCCTTTTGGACACGCTCGGTGGGGCAGAGGCAGTACCTGGGCAGACTGGCAGCAGGTGCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026999.10 |
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| 3UTR CCA 72 bp | TTGGCAGTGCTGACTCTCGTTTCCTGTCTTCGTATATaGGGGGAGGGGGTGTCCTGCCAACCACACCCACCA | + |
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Preference number: 3 (lower is better) Translates to: LAVLTLVSCLRI*GEGVSCQPHPP Trigger: TGGTGGGTGTGGTTGGCAGGACACCCCCTCCCCCCATATACGAAGACAGGAAACGAGAGTCAGCACTGCCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026999.10 |
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| 3UTR-3UTR CAA 90 bp | GCCAAGGGATGGTACCTTTGTTGTGACGGGGCTACACCCTTCTCAGCAGGAAGGTTAGCAGCAAGTAGTTaGAACGGTGGCCTGCTCGGC | + |
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Preference number: 3 (lower is better) Translates to: AKGWYLCCDGATPFSAGRLAASS*NGGLLG Trigger: GCCGAGCAGGCCACCGTTCAAACTACTTGCTGCTAA...CCTTCCTGCTGAGAAGGGTGTAGCCCCGTCACAACAAAGGTACCATCCCTTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 |
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| 3UTR CCA 72 bp | CGCACGGACAACCGAAACGCTGATCCAAAGGGAAGGTaGTGCCCACTTTCACACACCATGCTTGGCAGTGCT | + |
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Preference number: 3 (lower is better) Translates to: RTDNRNADPKGR*CPLSHTMLGSA Trigger: AGCACTGCCAAGCATGGTGTGTGAAAGTGGGCACCACCTTCCCTTTGGATCAGCGTTTCGGTTGTCCGTGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026999.10 |
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| 3UTR-3UTR CAA 90 bp | GCCAAGGGATGGTACCTTTGTTGTGACGGGGCTACACCCTTCTCAGCAGGAAGGTTTCACACACCATGCTaGGCAGTGCTGACTCTCGTT | + |
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Preference number: 3 (lower is better) Translates to: AKGWYLCCDGATPFSAGRFHTPC*AVLTLV Trigger: AACGAGAGTCAGCACTGCCAAGCATGGTGTGTGAAA...CCTTCCTGCTGAGAAGGGTGTAGCCCCGTCACAACAAAGGTACCATCCCTTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026999.10 |
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| 3UTR-3UTR CAA 90 bp | GCTGGGACCCGGTGGAAGGGCCTGAGAGGGTACTGGGGTAGCAATACTGTGACTCACCAACCAAAGAGTTaGCATGAAAAGCAATCACTC | + |
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Preference number: 3 (lower is better) Translates to: AGTRWKGLRGYWGSNTVTHQPKS*HEKQSL Trigger: GAGTGATTGCTTTTCATGCAAACTCTTTGGTTGGTG...AGTCACAGTATTGCTACCCCAGTACCCTCTCAGGCCCTTCCACCGGGTCCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026999.10 |
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| 3UTR TCA 72 bp | GTCCAAAAGGCTAGAGAGACACACAGCTTGGCACTATaGGCCTCTCAGCCGGGGGCATCCATAAAGAACACA | + |
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Preference number: 3 (lower is better) Translates to: VQKARETHSLAL*ASQPGASIKNT Trigger: TGTGTTCTTTATGGATGCCCCCGGCTGAGAGGCTCATAGTGCCAAGCTGTGTGTCTCTCTAGCCTTTTGGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026999.10 |
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| 3UTR GCA 72 bp | ACAATGAATGGCAATAACAACACCAACCAAAGAGTTTaGATGAAAAGCAATCACTCGGGAAAGGTTAGCAGC | + |
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Preference number: 3 (lower is better) Translates to: TMNGNNNTNQRV*MKSNHSGKVSS Trigger: GCTGCTAACCTTTCCCGAGTGATTGCTTTTCATGCAAACTCTTTGGTTGGTGTTGTTATTGCCATTCATTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026999.10 |
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| CDS-3UTR GCA 90 bp | TTCGGCAGGCTGGAGCAGAGCTTGGCACCTGCTGCCAGTCTGCCCAGGTACTGCGCAGGAGGCACGCGGTaGGCGTACCGCCGCGGGACT | + |
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Preference number: 4 (lower is better) Translates to: FGRLEQSLAPAASLPRYCAGGTR*AYRRGT Trigger: AGTCCCGCGGCGGTACGCGCACCGCGTGCCTCCTGC...GCAGTACCTGGGCAGACTGGCAGCAGGTGCCAAGCTCTGCTCCAGCCTGCCGAA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026999.10 |
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| CDS-3UTR GCA 90 bp | GCAGCAAGTAGTTTGAACGGTGGCCTGCTCGGCTCACGATCCGCCCTGTCCTCTCACCTCGGACTGCCTTaGCCAGGCAGCAGCCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: AASSLNGGLLGSRSALSSHLGLP*PGSSQP Trigger: GGGCTGGCTGCTGCCTGGGCAAGGCAGTCCGAGGTG...AGAGGACAGGGCGGATCGTGAGCCGAGCAGGCCACCGTTCAAACTACTTGCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 |
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| CDS-3UTR GCA 90 bp | TTCGGCAGGCTGGAGCAGAGCTTGGCACCTGCTGCCAGTCTGCCCAGGTACTGCTTTGGCACCTCGGACTaGCTTGCCCAGGCAGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: FGRLEQSLAPAASLPRYCFGTSD*LAQAAA Trigger: GGCTGCTGCCTGGGCAAGGCAGTCCGAGGTGCCAAA...GCAGTACCTGGGCAGACTGGCAGCAGGTGCCAAGCTCTGCTCCAGCCTGCCGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026999.10 |
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| CDS-3UTR GCA 90 bp | CGGGAAAGGTTAGCAGCAAGTAGTTTGAACGGTGGCCTGCTCGGCTCACGATCCGCAGGAGGCACGCGGTaGGCGTACCGCCGCGGGACT | + |
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Preference number: 4 (lower is better) Translates to: RERLAASSLNGGLLGSRSAGGTR*AYRRGT Trigger: AGTCCCGCGGCGGTACGCGCACCGCGTGCCTCCTGC...GGATCGTGAGCCGAGCAGGCCACCGTTCAAACTACTTGCTGCTAACCTTTCCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 |
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| CDS-3UTR CCA 90 bp | TTCGGCAGGCTGGAGCAGAGCTTGGCACCTGCTGCCAGTCTGCCCAGGTACTGCGCACCAACAGCGTCCTaGAGTCCGGGTTGTCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: FGRLEQSLAPAASLPRYCAPTAS*SPGCPV Trigger: CACTGGACAACCCGGACTCCAGGACGCTGTTGGTGC...GCAGTACCTGGGCAGACTGGCAGCAGGTGCCAAGCTCTGCTCCAGCCTGCCGAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026999.10 |
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| CDS-3UTR GCA 90 bp | GCAGCAAGTAGTTTGAACGGTGGCCTGCTCGGCTCACGATCCGCCCTGTCCTCTTTTGGCACCTCGGACTaGCTTGCCCAGGCAGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: AASSLNGGLLGSRSALSSFGTSD*LAQAAA Trigger: GGCTGCTGCCTGGGCAAGGCAGTCCGAGGTGCCAAA...AGAGGACAGGGCGGATCGTGAGCCGAGCAGGCCACCGTTCAAACTACTTGCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 |
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| CDS-3UTR GCA 90 bp | CGGTGGAAGGGCCTGAGAGGGTACTGGGGTAGCAATACTGTGACTGGGGCTGTCCCCGCGTCAGCTGGATaGCACAGCCGATCTTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: RWKGLRGYWGSNTVTGAVPASAG*HSRSCS Trigger: GGAGCAAGATCGGCTGTGGCATCCAGCTGACGCGGG...GACAGCCCCAGTCACAGTATTGCTACCCCAGTACCCTCTCAGGCCCTTCCACCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 |
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| CDS-3UTR CCA 90 bp | CGGGAAAGGTTAGCAGCAAGTAGTTTGAACGGTGGCCTGCTCGGCTCACGATCCCCCGGCACCCGAGGTTaGGGGATGGGGATGGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: RERLAASSLNGGLLGSRSPGTRG*GMGMVV Trigger: CACCACCATCCCCATCCCCCAACCTCGGGTGCCGGG...GGATCGTGAGCCGAGCAGGCCACCGTTCAAACTACTTGCTGCTAACCTTTCCCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 |
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| CDS-3UTR TCA 90 bp | CGGTGGAAGGGCCTGAGAGGGTACTGGGGTAGCAATACTGTGACTGGGGCTGTCGGATGGGGATGGTGGTaGCCTTTGGCACCTCGGACT | + |
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Preference number: 4 (lower is better) Translates to: RWKGLRGYWGSNTVTGAVGWGWW*PLAPRT Trigger: AGTCCGAGGTGCCAAAGGTCACCACCATCCCCATCC...GACAGCCCCAGTCACAGTATTGCTACCCCAGTACCCTCTCAGGCCCTTCCACCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 |
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| CDS-3UTR GCA 90 bp | TCTGCCCCACCGAGCGTGTCCAAAAGGCTAGAGAGACACACAGCTTGGCACTATCACCTCGGACTGCCTTaGCCAGGCAGCAGCCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: SAPPSVSKRLERHTAWHYHLGLP*PGSSQP Trigger: GGGCTGGCTGCTGCCTGGGCAAGGCAGTCCGAGGTG...ATAGTGCCAAGCTGTGTGTCTCTCTAGCCTTTTGGACACGCTCGGTGGGGCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026999.10 |
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| CDS-3UTR CCA 90 bp | GGGACCCGGTGGAAGGGCCTGAGAGGGTACTGGGGTAGCAATACTGTGACTGGGGATGGTGGTGACCTTTaGCACCTCGGACTGCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: GTRWKGLRGYWGSNTVTGDGGDL*HLGLPC Trigger: GCAAGGCAGTCCGAGGTGCCAAAGGTCACCACCATC...CCCAGTCACAGTATTGCTACCCCAGTACCCTCTCAGGCCCTTCCACCGGGTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 |
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| CDS-3UTR CCA 90 bp | GCTGGGACCCGGTGGAAGGGCCTGAGAGGGTACTGGGGTAGCAATACTGTGACTGCACCAACAGCGTCCTaGAGTCCGGGTTGTCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: AGTRWKGLRGYWGSNTVTAPTAS*SPGCPV Trigger: CACTGGACAACCCGGACTCCAGGACGCTGTTGGTGC...AGTCACAGTATTGCTACCCCAGTACCCTCTCAGGCCCTTCCACCGGGTCCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 |
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| CDS-3UTR GCA 90 bp | CGGGAAAGGTTAGCAGCAAGTAGTTTGAACGGTGGCCTGCTCGGCTCACGATCCCCCGCGTCAGCTGGATaGCACAGCCGATCTTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: RERLAASSLNGGLLGSRSPASAG*HSRSCS Trigger: GGAGCAAGATCGGCTGTGGCATCCAGCTGACGCGGG...GGATCGTGAGCCGAGCAGGCCACCGTTCAAACTACTTGCTGCTAACCTTTCCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 |
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| CDS-3UTR CCA 90 bp | AGTAGTTTGAACGGTGGCCTGCTCGGCTCACGATCCGCCCTGTCCTCTTCTCCCGATGGTGGTGACCTTTaGCACCTCGGACTGCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: SSLNGGLLGSRSALSSSPDGGDL*HLGLPC Trigger: GCAAGGCAGTCCGAGGTGCCAAAGGTCACCACCATC...GGGAGAAGAGGACAGGGCGGATCGTGAGCCGAGCAGGCCACCGTTCAAACTACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 |
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| CDS-3UTR CCA 90 bp | CGGTGGAAGGGCCTGAGAGGGTACTGGGGTAGCAATACTGTGACTGGGGCTGTCTGCTGCATGAACTCGTaGTCATTGGGCCGCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: RWKGLRGYWGSNTVTGAVCCMNS*SLGRCR Trigger: CCTGCAGCGGCCCAATGACCACGAGTTCATGCAGCA...GACAGCCCCAGTCACAGTATTGCTACCCCAGTACCCTCTCAGGCCCTTCCACCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 |
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| CDS-3UTR TCA 90 bp | AGTGTCAAAGTATCATACGAGCGAGCGTATGAGCTGAGAGAAGGGCTGGGAGCCCACCACGCACCAGTGTaGCCGATCCCCAGGCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: SVKVSYERAYELREGLGAHHAPV*PIPRLQ Trigger: CTGGAGCCTGGGGATCGGTCACACTGGTGCGTGGTG...GGCTCCCAGCCCTTCTCTCAGCTCATACGCTCGCTCGTATGATACTTTGACACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026999.10 |
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| CDS-3UTR TCA 90 bp | TTCTGGTTCAGCCTTCTAGCAGGCTGGCTTCTCAGAAGCCGGGAAAGGTTAGCACACCACGCACCAGTGTaGCCGATCCCCAGGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FWFSLLAGWLLRSRERLAHHAPV*PIPRLQ Trigger: CTGGAGCCTGGGGATCGGTCACACTGGTGCGTGGTG...TGCTAACCTTTCCCGGCTTCTGAGAAGCCAGCCTGCTAGAAGGCTGAACCAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168918.8 |
||
| CDS-3UTR GCA 90 bp | GCAGCAAGTAGTTTGAACGGTGGCCTGCTCGGCTCACGATCCGCCCTGTCCTCTCCAGGGAACACTTTGTaGACCAACAGCGTCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: AASSLNGGLLGSRSALSSPGNTL*TNSVLE Trigger: CTCCAGGACGCTGTTGGTGCACAAAGTGTTCCCTGG...AGAGGACAGGGCGGATCGTGAGCCGAGCAGGCCACCGTTCAAACTACTTGCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 |
||
| CDS-3UTR CCA 90 bp | AACAATTGGTTCTGGTTCAGCCTTCTAGCAGGCTGGCTTCTCAGAAGCCGGGAACCCGGCACCCGAGGTTaGGGGATGGGGATGGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: NNWFWFSLLAGWLLRSREPGTRG*GMGMVV Trigger: CACCACCATCCCCATCCCCCAACCTCGGGTGCCGGG...TTCCCGGCTTCTGAGAAGCCAGCCTGCTAGAAGGCTGAACCAGAACCAATTGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168918.8 |
||
| CDS-3UTR TCA 90 bp | CGGTGGAAGGGCCTGAGAGGGTACTGGGGTAGCAATACTGTGACTGGGGCTGTCACACCAGCTCGGGGTTaGTCTTCCCGTAAGATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RWKGLRGYWGSNTVTGAVTPARG*SSRKIH Trigger: GTGAATCTTACGGGAAGATCAACCCCGAGCTGGTGT...GACAGCCCCAGTCACAGTATTGCTACCCCAGTACCCTCTCAGGCCCTTCCACCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 |
||
| CDS-3UTR TCA 90 bp | GCAGCAAGTAGTTTGAACGGTGGCCTGCTCGGCTCACGATCCGCCCTGTCCTCTACACCAGCTCGGGGTTaGTCTTCCCGTAAGATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: AASSLNGGLLGSRSALSSTPARG*SSRKIH Trigger: GTGAATCTTACGGGAAGATCAACCCCGAGCTGGTGT...AGAGGACAGGGCGGATCGTGAGCCGAGCAGGCCACCGTTCAAACTACTTGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 |
||
| CDS-3UTR GCA 90 bp | CGGTGGAAGGGCCTGAGAGGGTACTGGGGTAGCAATACTGTGACTGGGGCTGTCAGATGGGGTAACTGCTaGGGTTGTAAACCCACACGC | + |
|
Preference number: 4 (lower is better) Translates to: RWKGLRGYWGSNTVTGAVRWGNC*GCKPTR Trigger: GCGTGTGGGTTTACAACCGCAGCAGTTACCCCATCT...GACAGCCCCAGTCACAGTATTGCTACCCCAGTACCCTCTCAGGCCCTTCCACCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 |
||
| CDS-3UTR GCA 90 bp | GGGACCCGGTGGAAGGGCCTGAGAGGGTACTGGGGTAGCAATACTGTGACTGGGAAACCCGTCCATGGTTaGTGCATGAACTCGTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GTRWKGLRGYWGSNTVTGKPVHG*CMNSWS Trigger: TGACCACGAGTTCATGCAGCAACCATGGACGGGTTT...CCCAGTCACAGTATTGCTACCCCAGTACCCTCTCAGGCCCTTCCACCGGGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 |
||
| CDS-3UTR CCA 90 bp | GCCAAGGGATGGTACCTTTGTTGTGACGGGGCTACACCCTTCTCAGCAGGAAGGACTTCCCGCGTCAGCTaGATGCCACAGCCGATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: AKGWYLCCDGATPFSAGRTSRVS*MPQPIL Trigger: CAAGATCGGCTGTGGCATCCAGCTGACGCGGGAAGT...CCTTCCTGCTGAGAAGGGTGTAGCCCCGTCACAACAAAGGTACCATCCCTTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 |
||
| 3UTR CAA 72 bp | CTTCTCAGAAGCCGGGAAAGGTTAGCAGCAAGTAGTTaGAACGGTGGCCTGCTCGGCTCACGATCCGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLRSRERLAASS*NGGLLGSRSAL Trigger: CAGGGCGGATCGTGAGCCGAGCAGGCCACCGTTCAAACTACTTGCTGCTAACCTTTCCCGGCTTCTGAGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168918.8 |
||
| CDS-3UTR TCA 90 bp | TGGCTTCTCAGAAGCCGGGAAAGGTTAGCAGCAAGTAGTTTGAACGGTGGCCTGGGATGGGGATGGTGGTaGCCTTTGGCACCTCGGACT | + |
|
Preference number: 4 (lower is better) Translates to: WLLRSRERLAASSLNGGLGWGWW*PLAPRT Trigger: AGTCCGAGGTGCCAAAGGTCACCACCATCCCCATCC...CAGGCCACCGTTCAAACTACTTGCTGCTAACCTTTCCCGGCTTCTGAGAAGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168918.8 |
||
| CDS-3UTR TCA 90 bp | GCAGCAAGTAGTTTGAACGGTGGCCTGCTCGGCTCACGATCCGCCCTGTCCTCTTCTTGTTGTCCGAATTaGGCTGTCCGAGGCAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: AASSLNGGLLGSRSALSSSCCPN*AVRGKS Trigger: GCTTTTGCCTCGGACAGCTCAATTCGGACAACAAGA...AGAGGACAGGGCGGATCGTGAGCCGAGCAGGCCACCGTTCAAACTACTTGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 |
||
| CDS-3UTR GCA 90 bp | GCCAAGGGATGGTACCTTTGTTGTGACGGGGCTACACCCTTCTCAGCAGGAAGGTTCTTGAGCACCGAGTaGGTGAGCGCCTTCAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: AKGWYLCCDGATPFSAGRFLSTE*VSAFRS Trigger: GGATCTGAAGGCGCTCACGCACTCGGTGCTCAAGAA...CCTTCCTGCTGAGAAGGGTGTAGCCCCGTCACAACAAAGGTACCATCCCTTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 |
||
| CDS-3UTR GCA 90 bp | GCCAAGGGATGGTACCTTTGTTGTGACGGGGCTACACCCTTCTCAGCAGGAAGGCCAGGGAACACTTTGTaGACCAACAGCGTCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: AKGWYLCCDGATPFSAGRPGNTL*TNSVLE Trigger: CTCCAGGACGCTGTTGGTGCACAAAGTGTTCCCTGG...CCTTCCTGCTGAGAAGGGTGTAGCCCCGTCACAACAAAGGTACCATCCCTTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 |
||
| CDS-3UTR GCA 90 bp | AGTAGTTTGAACGGTGGCCTGCTCGGCTCACGATCCGCCCTGTCCTCTTCTCCCAAACCCGTCCATGGTTaGTGCATGAACTCGTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSLNGGLLGSRSALSSSPKPVHG*CMNSWS Trigger: TGACCACGAGTTCATGCAGCAACCATGGACGGGTTT...GGGAGAAGAGGACAGGGCGGATCGTGAGCCGAGCAGGCCACCGTTCAAACTACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 |
||
| CDS-3UTR GCA 90 bp | GGGACCCGGTGGAAGGGCCTGAGAGGGTACTGGGGTAGCAATACTGTGACTGGGTTCACAAAGCTGATCTaGACGGTGAAACCCGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GTRWKGLRGYWGSNTVTGFTKLI*TVKPVH Trigger: ATGGACGGGTTTCACCGTGCAGATCAGCTTTGTGAA...CCCAGTCACAGTATTGCTACCCCAGTACCCTCTCAGGCCCTTCCACCGGGTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 |
||
| CDS-3UTR TCA 90 bp | GGGACCCGGTGGAAGGGCCTGAGAGGGTACTGGGGTAGCAATACTGTGACTGGGAGCCTGCAGTTGGTTTaGGAAAATCCATTGGGTATC | + |
|
Preference number: 4 (lower is better) Translates to: GTRWKGLRGYWGSNTVTGSLQLV*ENPLGI Trigger: GATACCCAATGGATTTTCTCAAACCAACTGCAGGCT...CCCAGTCACAGTATTGCTACCCCAGTACCCTCTCAGGCCCTTCCACCGGGTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 |
||
| CDS-3UTR TCA 90 bp | TCTGCCCCACCGAGCGTGTCCAAAAGGCTAGAGAGACACACAGCTTGGCACTATTCCATGGTTGCTGCATaGACTCGTGGTCATTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SAPPSVSKRLERHTAWHYSMVAA*TRGHWA Trigger: GGCCCAATGACCACGAGTTCATGCAGCAACCATGGA...ATAGTGCCAAGCTGTGTGTCTCTCTAGCCTTTTGGACACGCTCGGTGGGGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026999.10 |
||
| CDS-3UTR GCA 90 bp | CGGGAAAGGTTAGCAGCAAGTAGTTTGAACGGTGGCCTGCTCGGCTCACGATCCAGATGGGGTAACTGCTaGGGTTGTAAACCCACACGC | + |
|
Preference number: 4 (lower is better) Translates to: RERLAASSLNGGLLGSRSRWGNC*GCKPTR Trigger: GCGTGTGGGTTTACAACCGCAGCAGTTACCCCATCT...GGATCGTGAGCCGAGCAGGCCACCGTTCAAACTACTTGCTGCTAACCTTTCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 |
||
| CDS-3UTR GCA 90 bp | CGGGAAAGGTTAGCAGCAAGTAGTTTGAACGGTGGCCTGCTCGGCTCACGATCCCCCGTCCATGGTTGCTaGATGAACTCGTGGTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: RERLAASSLNGGLLGSRSPVHGC*MNSWSL Trigger: CAATGACCACGAGTTCATGCAGCAACCATGGACGGG...GGATCGTGAGCCGAGCAGGCCACCGTTCAAACTACTTGCTGCTAACCTTTCCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 |
||
| CDS-3UTR TCA 90 bp | GCTGGGACCCGGTGGAAGGGCCTGAGAGGGTACTGGGGTAGCAATACTGTGACTACTTTCTGTACCAGCTaGCTCTTGTTGTCCGAATTG | + |
|
Preference number: 4 (lower is better) Translates to: AGTRWKGLRGYWGSNTVTTFCTS*LLLSEL Trigger: CAATTCGGACAACAAGAGTCAGCTGGTACAGAAAGT...AGTCACAGTATTGCTACCCCAGTACCCTCTCAGGCCCTTCCACCGGGTCCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 |
||
| CDS-3UTR GCA 90 bp | AGTGTCAAAGTATCATACGAGCGAGCGTATGAGCTGAGAGAAGGGCTGGGAGCCTTGACTTCCGAGGAATaGCTGAGATCCGGCCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: SVKVSYERAYELREGLGALTSEE*LRSGHL Trigger: CAGGTGGCCGGATCTCAGGCATTCCTCGGAAGTCAA...GGCTCCCAGCCCTTCTCTCAGCTCATACGCTCGCTCGTATGATACTTTGACACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026999.10 |
||
| CDS-3UTR GCA 90 bp | GCAGCAAGTAGTTTGAACGGTGGCCTGCTCGGCTCACGATCCGCCCTGTCCTCTAGCATCTGGACAGCCTaGAGTTGGTTTGAGAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: AASSLNGGLLGSRSALSSSIWTA*SWFEKI Trigger: GATTTTCTCAAACCAACTGCAGGCTGTCCAGATGCT...AGAGGACAGGGCGGATCGTGAGCCGAGCAGGCCACCGTTCAAACTACTTGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 |
||
| CDS-3UTR GCA 90 bp | GCTGGGACCCGGTGGAAGGGCCTGAGAGGGTACTGGGGTAGCAATACTGTGACTAGCATCTGGACAGCCTaGAGTTGGTTTGAGAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: AGTRWKGLRGYWGSNTVTSIWTA*SWFEKI Trigger: GATTTTCTCAAACCAACTGCAGGCTGTCCAGATGCT...AGTCACAGTATTGCTACCCCAGTACCCTCTCAGGCCCTTCCACCGGGTCCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGGACCCGGTGGAAGGGCCTGAGAGGGTACTGGGGTAGCAATACTGTGACTTGGACAGCCTGCAGTTaGTTTGAGAAAATCCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: AGTRWKGLRGYWGSNTVTWTACS*FEKIHW Trigger: CCAATGGATTTTCTCAAACCAACTGCAGGCTGTCCA...AGTCACAGTATTGCTACCCCAGTACCCTCTCAGGCCCTTCCACCGGGTCCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 |
||
| CDS-3UTR CCA 90 bp | AACAATTGGTTCTGGTTCAGCCTTCTAGCAGGCTGGCTTCTCAGAAGCCGGGAATGCTGCATGAACTCGTaGTCATTGGGCCGCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NNWFWFSLLAGWLLRSRECCMNS*SLGRCR Trigger: CCTGCAGCGGCCCAATGACCACGAGTTCATGCAGCA...TTCCCGGCTTCTGAGAAGCCAGCCTGCTAGAAGGCTGAACCAGAACCAATTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168918.8 |
||
| CDS-3UTR TCA 90 bp | AACAATTGGTTCTGGTTCAGCCTTCTAGCAGGCTGGCTTCTCAGAAGCCGGGAATCCATGGTTGCTGCATaGACTCGTGGTCATTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: NNWFWFSLLAGWLLRSRESMVAA*TRGHWA Trigger: GGCCCAATGACCACGAGTTCATGCAGCAACCATGGA...TTCCCGGCTTCTGAGAAGCCAGCCTGCTAGAAGGCTGAACCAGAACCAATTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168918.8 |
||
| CDS-3UTR GCA 90 bp | AACAATTGGTTCTGGTTCAGCCTTCTAGCAGGCTGGCTTCTCAGAAGCCGGGAATTGACTTCCGAGGAATaGCTGAGATCCGGCCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: NNWFWFSLLAGWLLRSRELTSEE*LRSGHL Trigger: CAGGTGGCCGGATCTCAGGCATTCCTCGGAAGTCAA...TTCCCGGCTTCTGAGAAGCCAGCCTGCTAGAAGGCTGAACCAGAACCAATTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168918.8 |
||
| CDS-3UTR GCA 90 bp | GCCAAGGGATGGTACCTTTGTTGTGACGGGGCTACACCCTTCTCAGCAGGAAGGTTCACAAAGCTGATCTaGACGGTGAAACCCGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: AKGWYLCCDGATPFSAGRFTKLI*TVKPVH Trigger: ATGGACGGGTTTCACCGTGCAGATCAGCTTTGTGAA...CCTTCCTGCTGAGAAGGGTGTAGCCCCGTCACAACAAAGGTACCATCCCTTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 |
||
| CDS-3UTR TCA 90 bp | GCCAAGGGATGGTACCTTTGTTGTGACGGGGCTACACCCTTCTCAGCAGGAAGGACTTTCTGTACCAGCTaGCTCTTGTTGTCCGAATTG | + |
|
Preference number: 4 (lower is better) Translates to: AKGWYLCCDGATPFSAGRTFCTS*LLLSEL Trigger: CAATTCGGACAACAAGAGTCAGCTGGTACAGAAAGT...CCTTCCTGCTGAGAAGGGTGTAGCCCCGTCACAACAAAGGTACCATCCCTTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGGACCCGGTGGAAGGGCCTGAGAGGGTACTGGGGTAGCAATACTGTGACTTTTGAGAAAATCCATTaGGTATCTGGAGTAAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AGTRWKGLRGYWGSNTVTFEKIH*VSGVRR Trigger: CCTCCTTACTCCAGATACCCAATGGATTTTCTCAAA...AGTCACAGTATTGCTACCCCAGTACCCTCTCAGGCCCTTCCACCGGGTCCCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 |
||
| CDS-3UTR CCA 90 bp | CGGGAAAGGTTAGCAGCAAGTAGTTTGAACGGTGGCCTGCTCGGCTCACGATCCTGGACAGCCTGCAGTTaGTTTGAGAAAATCCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: RERLAASSLNGGLLGSRSWTACS*FEKIHW Trigger: CCAATGGATTTTCTCAAACCAACTGCAGGCTGTCCA...GGATCGTGAGCCGAGCAGGCCACCGTTCAAACTACTTGCTGCTAACCTTTCCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 |
||
| CDS-3UTR TCA 90 bp | AACAATTGGTTCTGGTTCAGCCTTCTAGCAGGCTGGCTTCTCAGAAGCCGGGAATCTTGTTGTCCGAATTaGGCTGTCCGAGGCAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: NNWFWFSLLAGWLLRSRESCCPN*AVRGKS Trigger: GCTTTTGCCTCGGACAGCTCAATTCGGACAACAAGA...TTCCCGGCTTCTGAGAAGCCAGCCTGCTAGAAGGCTGAACCAGAACCAATTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168918.8 |
||
| 3UTR CAA 72 bp | CAAAGGGAAGGTGGTGCCCACTTTCACACACCATGCTaGGCAGTGCTGACTCTCGTTTCCTGTCTTCGTATA | + |
|
Preference number: 4 (lower is better) Translates to: QREGGAHFHTPC*AVLTLVSCLRI Trigger: TATACGAAGACAGGAAACGAGAGTCAGCACTGCCAAGCATGGTGTGTGAAAGTGGGCACCACCTTCCCTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026999.10 |
||
| CDS-3UTR CCA 90 bp | CGGGAAAGGTTAGCAGCAAGTAGTTTGAACGGTGGCCTGCTCGGCTCACGATCCTTTGAGAAAATCCATTaGGTATCTGGAGTAAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RERLAASSLNGGLLGSRSFEKIH*VSGVRR Trigger: CCTCCTTACTCCAGATACCCAATGGATTTTCTCAAA...GGATCGTGAGCCGAGCAGGCCACCGTTCAAACTACTTGCTGCTAACCTTTCCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 |
||
| CDS-3UTR CCA 90 bp | AATCCGCACCATAAGCTAATTTCTCAAAGAACAAGACAAGCGGGACACACGGATACTTCCCGCGTCAGCTaGATGCCACAGCCGATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NPHHKLISQRTRQAGHTDTSRVS*MPQPIL Trigger: CAAGATCGGCTGTGGCATCCAGCTGACGCGGGAAGT...ATCCGTGTGTCCCGCTTGTCTTGTTCTTTGAGAAATTAGCTTATGGTGCGGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026999.10 |
||
| CDS-3UTR CCA 90 bp | AAGAACAGTGTCAAAGTATCATACGAGCGAGCGTATGAGCTGAGAGAAGGGCTGAATCCATTGGGTATCTaGAGTAAGGAGGAGGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KNSVKVSYERAYELREGLNPLGI*SKEEGE Trigger: CTCCCCCTCCTCCTTACTCCAGATACCCAATGGATT...CAGCCCTTCTCTCAGCTCATACGCTCGCTCGTATGATACTTTGACACTGTTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026999.10 |
||
| CDS-3UTR CAA 90 bp | TTCGGCAGGCTGGAGCAGAGCTTGGCACCTGCTGCCAGTCTGCCCAGGTACTGCGCACCTCGGACTGCCTaGCCCAGGCAGCAGCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: FGRLEQSLAPAASLPRYCAPRTA*PRQQPA Trigger: GGCTGGCTGCTGCCTGGGCAAGGCAGTCCGAGGTGC...GCAGTACCTGGGCAGACTGGCAGCAGGTGCCAAGCTCTGCTCCAGCCTGCCGAA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026999.10 |
||
| CDS-3UTR CAA 90 bp | GCCAAGGGATGGTACCTTTGTTGTGACGGGGCTACACCCTTCTCAGCAGGAAGGGCACCTCGGACTGCCTaGCCCAGGCAGCAGCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: AKGWYLCCDGATPFSAGRAPRTA*PRQQPA Trigger: GGCTGGCTGCTGCCTGGGCAAGGCAGTCCGAGGTGC...CCTTCCTGCTGAGAAGGGTGTAGCCCCGTCACAACAAAGGTACCATCCCTTGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 |
||
| CDS-3UTR CAA 90 bp | TTCGGCAGGCTGGAGCAGAGCTTGGCACCTGCTGCCAGTCTGCCCAGGTACTGCATCCAGGGAGGGCTCTaGGACACAGTAGAGCCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: FGRLEQSLAPAASLPRYCIQGGL*DTVEPP Trigger: GGGAGGCTCTACTGTGTCCAAGAGCCCTCCCTGGAT...GCAGTACCTGGGCAGACTGGCAGCAGGTGCCAAGCTCTGCTCCAGCCTGCCGAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026999.10 |
||
| CDS-3UTR CAA 90 bp | GCAGCAAGTAGTTTGAACGGTGGCCTGCTCGGCTCACGATCCGCCCTGTCCTCTGGCCACCTGAACACTTaGCACAGCAGGAGGGGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: AASSLNGGLLGSRSALSSGHLNT*HSRRGS Trigger: GCTCCCCCTCCTGCTGTGCAAAGTGTTCAGGTGGCC...AGAGGACAGGGCGGATCGTGAGCCGAGCAGGCCACCGTTCAAACTACTTGCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 |
||
| CDS-3UTR CAA 90 bp | GCTGGGACCCGGTGGAAGGGCCTGAGAGGGTACTGGGGTAGCAATACTGTGACTGGCCACCTGAACACTTaGCACAGCAGGAGGGGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: AGTRWKGLRGYWGSNTVTGHLNT*HSRRGS Trigger: GCTCCCCCTCCTGCTGTGCAAAGTGTTCAGGTGGCC...AGTCACAGTATTGCTACCCCAGTACCCTCTCAGGCCCTTCCACCGGGTCCCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 |
||
| CDS-3UTR CAA 90 bp | GGGACCCGGTGGAAGGGCCTGAGAGGGTACTGGGGTAGCAATACTGTGACTGGGCGCTCCTTGAGTTTCTaGAGCACCGAGTGCGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GTRWKGLRGYWGSNTVTGRSLSF*STECVS Trigger: GCTCACGCACTCGGTGCTCAAGAAACTCAAGGAGCG...CCCAGTCACAGTATTGCTACCCCAGTACCCTCTCAGGCCCTTCCACCGGGTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 |
||
| CDS-3UTR CAA 90 bp | GCAGCAAGTAGTTTGAACGGTGGCCTGCTCGGCTCACGATCCGCCCTGTCCTCTATCCAGGGAGGGCTCTaGGACACAGTAGAGCCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: AASSLNGGLLGSRSALSSIQGGL*DTVEPP Trigger: GGGAGGCTCTACTGTGTCCAAGAGCCCTCCCTGGAT...AGAGGACAGGGCGGATCGTGAGCCGAGCAGGCCACCGTTCAAACTACTTGCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 |
||
| CDS-3UTR CAA 90 bp | AGTAGTTTGAACGGTGGCCTGCTCGGCTCACGATCCGCCCTGTCCTCTTCTCCCTCCAGCTGCCGCTCCTaGAGTTTCTTGAGCACCGAG | + |
|
Preference number: 5 (lower is better) Translates to: SSLNGGLLGSRSALSSSPSSCRS*SFLSTE Trigger: CTCGGTGCTCAAGAAACTCAAGGAGCGGCAGCTGGA...GGGAGAAGAGGACAGGGCGGATCGTGAGCCGAGCAGGCCACCGTTCAAACTACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 |
||
| CDS-3UTR CAA 90 bp | GGGACCCGGTGGAAGGGCCTGAGAGGGTACTGGGGTAGCAATACTGTGACTGGGCAGCAACACAGCCTCTaGACTTCCGAGGAATGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GTRWKGLRGYWGSNTVTGQQHSL*TSEECL Trigger: CAGGCATTCCTCGGAAGTCAAGAGGCTGTGTTGCTG...CCCAGTCACAGTATTGCTACCCCAGTACCCTCTCAGGCCCTTCCACCGGGTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 |
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| CDS CCA 90 bp | GCCCCAGCCCTTCACAAAGCTGATCTGCACGGTGAAACCCGTCCATaGTTGCTGCATGAACTCGTGGTCATTGGGCCGCTGCAGGCTGTA | + |
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Preference number: 5 (lower is better) Translates to: APALHKADLHGETRP*LLHELVVIGPLQAV Trigger: TACAGCCTGCAGCGGCCCAATGACCACGAGTTCATGCAGCAACCATGGACGGGTTTCACCGTGCAGATCAGCTTTGTGAAGGGCTGGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 ENSMUST00000174411.2 |
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| CDS-3UTR CAA 90 bp | GCAGCAAGTAGTTTGAACGGTGGCCTGCTCGGCTCACGATCCGCCCTGTCCTCTGAAACCCGTCCATGGTaGCTGCATGAACTCGTGGTC | + |
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Preference number: 5 (lower is better) Translates to: AASSLNGGLLGSRSALSSETRPW*LHELVV Trigger: GACCACGAGTTCATGCAGCAACCATGGACGGGTTTC...AGAGGACAGGGCGGATCGTGAGCCGAGCAGGCCACCGTTCAAACTACTTGCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 |
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| CDS TCA 90 bp | CCCCACGCGAGTCTTCTCCTCCCAGTATGCCACCACGCACCAGTGTaGCCGATCCCCAGGCTCCAGAAGAAGTTGGGAATCAGTTGGTTT | + |
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Preference number: 5 (lower is better) Translates to: PHASLLLPVCHHAPV*PIPRLQKKLGISWF Trigger: AAACCAACTGATTCCCAACTTCTTCTGGAGCCTGGGGATCGGTCACACTGGTGCGTGGTGGCATACTGGGAGGAGAAGACTCGCGTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174843.8 |
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| CDS-3UTR CAA 90 bp | GGGACCCGGTGGAAGGGCCTGAGAGGGTACTGGGGTAGCAATACTGTGACTGGGCTCTTGTTGTCCGAATaGAGCTGTCCGAGGCAAAAG | + |
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Preference number: 5 (lower is better) Translates to: GTRWKGLRGYWGSNTVTGLLLSE*SCPRQK Trigger: CTTTTGCCTCGGACAGCTCAATTCGGACAACAAGAG...CCCAGTCACAGTATTGCTACCCCAGTACCCTCTCAGGCCCTTCCACCGGGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 |
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| CDS-3UTR CAA 90 bp | AGTGTCAAAGTATCATACGAGCGAGCGTATGAGCTGAGAGAAGGGCTGGGAGCCGTCCTGGAGTCCGGGTaGTCCAGTGTGGCGGACTTG | + |
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Preference number: 5 (lower is better) Translates to: SVKVSYERAYELREGLGAVLESG*SSVADL Trigger: CAAGTCCGCCACACTGGACAACCCGGACTCCAGGAC...GGCTCCCAGCCCTTCTCTCAGCTCATACGCTCGCTCGTATGATACTTTGACACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026999.10 |
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| CDS-3UTR CAA 90 bp | TTCTGGTTCAGCCTTCTAGCAGGCTGGCTTCTCAGAAGCCGGGAAAGGTTAGCAGTCCTGGAGTCCGGGTaGTCCAGTGTGGCGGACTTG | + |
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Preference number: 5 (lower is better) Translates to: FWFSLLAGWLLRSRERLAVLESG*SSVADL Trigger: CAAGTCCGCCACACTGGACAACCCGGACTCCAGGAC...TGCTAACCTTTCCCGGCTTCTGAGAAGCCAGCCTGCTAGAAGGCTGAACCAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168918.8 |
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| CDS-3UTR CAA 90 bp | GCCAAGGGATGGTACCTTTGTTGTGACGGGGCTACACCCTTCTCAGCAGGAAGGCAGCAACACAGCCTCTaGACTTCCGAGGAATGCCTG | + |
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Preference number: 5 (lower is better) Translates to: AKGWYLCCDGATPFSAGRQQHSL*TSEECL Trigger: CAGGCATTCCTCGGAAGTCAAGAGGCTGTGTTGCTG...CCTTCCTGCTGAGAAGGGTGTAGCCCCGTCACAACAAAGGTACCATCCCTTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 |
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| CDS-3UTR CAA 90 bp | CGGGAAAGGTTAGCAGCAAGTAGTTTGAACGGTGGCCTGCTCGGCTCACGATCCCTCTTGTTGTCCGAATaGAGCTGTCCGAGGCAAAAG | + |
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Preference number: 5 (lower is better) Translates to: RERLAASSLNGGLLGSRSLLLSE*SCPRQK Trigger: CTTTTGCCTCGGACAGCTCAATTCGGACAACAAGAG...GGATCGTGAGCCGAGCAGGCCACCGTTCAAACTACTTGCTGCTAACCTTTCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 |
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| CDS-3UTR CAA 90 bp | AGTGTCAAAGTATCATACGAGCGAGCGTATGAGCTGAGAGAAGGGCTGGGAGCCGAAACCCGTCCATGGTaGCTGCATGAACTCGTGGTC | + |
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Preference number: 5 (lower is better) Translates to: SVKVSYERAYELREGLGAETRPW*LHELVV Trigger: GACCACGAGTTCATGCAGCAACCATGGACGGGTTTC...GGCTCCCAGCCCTTCTCTCAGCTCATACGCTCGCTCGTATGATACTTTGACACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026999.10 |
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| CDS TCA 90 bp | CATTGGGCCGCTGCAGGCTGTAGGCTTTCTCATAGTCAAAAGCCTTaGTGGAGAAACCAGGGAACACTTTGTGCACCAACAGCGTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: HWAAAGCRLSHSQKP*WRNQGTLCAPTASW Trigger: CCAGGACGCTGTTGGTGCACAAAGTGTTCCCTGGTTTCTCCATCAAGGCTTTTGACTATGAGAAAGCCTACAGCCTGCAGCGGCCCAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 ENSMUST00000174411.2 |
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| CDS-3UTR CAA 90 bp | TGGCTTCTCAGAAGCCGGGAAAGGTTAGCAGCAAGTAGTTTGAACGGTGGCCTGAAACCAGGGAACACTTaGTGCACCAACAGCGTCCTG | + |
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Preference number: 5 (lower is better) Translates to: WLLRSRERLAASSLNGGLKPGNT*CTNSVL Trigger: CAGGACGCTGTTGGTGCACAAAGTGTTCCCTGGTTT...CAGGCCACCGTTCAAACTACTTGCTGCTAACCTTTCCCGGCTTCTGAGAAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168918.8 |
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| CDS-3UTR CAA 90 bp | AATCCGCACCATAAGCTAATTTCTCAAAGAACAAGACAAGCGGGACACACGGATCGCTCCTTGAGTTTCTaGAGCACCGAGTGCGTGAGC | + |
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Preference number: 5 (lower is better) Translates to: NPHHKLISQRTRQAGHTDRSLSF*STECVS Trigger: GCTCACGCACTCGGTGCTCAAGAAACTCAAGGAGCG...ATCCGTGTGTCCCGCTTGTCTTGTTCTTTGAGAAATTAGCTTATGGTGCGGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026999.10 |
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| CDS-3UTR CAA 90 bp | AATCCGCACCATAAGCTAATTTCTCAAAGAACAAGACAAGCGGGACACACGGATAAACCAGGGAACACTTaGTGCACCAACAGCGTCCTG | + |
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Preference number: 5 (lower is better) Translates to: NPHHKLISQRTRQAGHTDKPGNT*CTNSVL Trigger: CAGGACGCTGTTGGTGCACAAAGTGTTCCCTGGTTT...ATCCGTGTGTCCCGCTTGTCTTGTTCTTTGAGAAATTAGCTTATGGTGCGGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026999.10 |
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| CDS CAA 90 bp | CCAGCCCTTCACAAAGCTGATCTGCACGGTGAAACCCGTCCATGGTaGCTGCATGAACTCGTGGTCATTGGGCCGCTGCAGGCTGTAGGC | + |
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Preference number: 6 (lower is better) Translates to: PALHKADLHGETRPW*LHELVVIGPLQAVG Trigger: GCCTACAGCCTGCAGCGGCCCAATGACCACGAGTTCATGCAGCAACCATGGACGGGTTTCACCGTGCAGATCAGCTTTGTGAAGGGCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 ENSMUST00000174411.2 |
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| CDS GCA 72 bp | AAACCCACACGCCATCCACTTCCCGCGTCAGCTGGATaGCACAGCCGATCTTGCTCCGCACTTTCTGTACCA | + |
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Preference number: 6 (lower is better) Translates to: KPTRHPLPASAG*HSRSCSALSVP Trigger: TGGTACAGAAAGTGCGGAGCAAGATCGGCTGTGGCATCCAGCTGACGCGGGAAGTGGATGGCGTGTGGGTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 ENSMUST00000174411.2 |
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| CDS GCA 72 bp | AAGCTGATCTGCACGGTGAAACCCGTCCATGGTTGCTaGATGAACTCGTGGTCATTGGGCCGCTGCAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: KLICTVKPVHGC*MNSWSLGRCRL Trigger: CAGCCTGCAGCGGCCCAATGACCACGAGTTCATGCAGCAACCATGGACGGGTTTCACCGTGCAGATCAGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 ENSMUST00000174411.2 |
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| CDS TCA 72 bp | AGTCTTCTCCTCCCAGTATGCCACCACGCACCAGTGTaGCCGATCCCCAGGCTCCAGAAGAAGTTGGGAATC | + |
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Preference number: 6 (lower is better) Translates to: SLLLPVCHHAPV*PIPRLQKKLGI Trigger: GATTCCCAACTTCTTCTGGAGCCTGGGGATCGGTCACACTGGTGCGTGGTGGCATACTGGGAGGAGAAGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 ENSMUST00000174411.2 ENSMUST00000174843.8 |
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| CDS GCA 72 bp | CCACTTCCCGCGTCAGCTGGATGCCACAGCCGATCTTaGTCCGCACTTTCTGTACCAGCTGACTCTTGTTGT | + |
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Preference number: 6 (lower is better) Translates to: PLPASAGCHSRS*SALSVPADSCC Trigger: ACAACAAGAGTCAGCTGGTACAGAAAGTGCGGAGCAAGATCGGCTGTGGCATCCAGCTGACGCGGGAAGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 ENSMUST00000174411.2 |
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| CDS GCA 72 bp | ACAAAGCTGATCTGCACGGTGAAACCCGTCCATGGTTaGTGCATGAACTCGTGGTCATTGGGCCGCTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: TKLICTVKPVHG*CMNSWSLGRCR Trigger: CCTGCAGCGGCCCAATGACCACGAGTTCATGCAGCAACCATGGACGGGTTTCACCGTGCAGATCAGCTTTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 ENSMUST00000174411.2 |
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| CDS CAA 72 bp | CACAAAGCTGATCTGCACGGTGAAACCCGTCCATGGTaGCTGCATGAACTCGTGGTCATTGGGCCGCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: HKADLHGETRPW*LHELVVIGPLQ Trigger: CTGCAGCGGCCCAATGACCACGAGTTCATGCAGCAACCATGGACGGGTTTCACCGTGCAGATCAGCTTTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 ENSMUST00000174411.2 |
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| CDS CCA 72 bp | CGTTCCCCCGGTTTCCGCGGAGGAAGGTACAGCATCTaGACAGCCTGCAGTTGGTTTGAGAAAATCCATTGG | + |
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Preference number: 6 (lower is better) Translates to: RSPGFRGGRYSI*TACSWFEKIHW Trigger: CCAATGGATTTTCTCAAACCAACTGCAGGCTGTCCAGATGCTGTACCTTCCTCCGCGGAAACCGGGGGAACG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 ENSMUST00000174411.2 |
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| CDS CCA 72 bp | CTTCACAAAGCTGATCTGCACGGTGAAACCCGTCCATaGTTGCTGCATGAACTCGTGGTCATTGGGCCGCTG | + |
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Preference number: 6 (lower is better) Translates to: LHKADLHGETRP*LLHELVVIGPL Trigger: CAGCGGCCCAATGACCACGAGTTCATGCAGCAACCATGGACGGGTTTCACCGTGCAGATCAGCTTTGTGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 ENSMUST00000174411.2 |
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| CDS TCA 72 bp | CCACAGCCGATCTTGCTCCGCACTTTCTGTACCAGCTaGCTCTTGTTGTCCGAATTGAGCTGTCCGAGGCAA | + |
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Preference number: 6 (lower is better) Translates to: PQPILLRTFCTS*LLLSELSCPRQ Trigger: TTGCCTCGGACAGCTCAATTCGGACAACAAGAGTCAGCTGGTACAGAAAGTGCGGAGCAAGATCGGCTGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 ENSMUST00000174411.2 |
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| CDS GCA 72 bp | TCAAAAGCCTTGATGGAGAAACCAGGGAACACTTTGTaGACCAACAGCGTCCTGGAGTCCGGGTTGTCCAGT | + |
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Preference number: 6 (lower is better) Translates to: SKALMEKPGNTL*TNSVLESGLSS Trigger: ACTGGACAACCCGGACTCCAGGACGCTGTTGGTGCACAAAGTGTTCCCTGGTTTCTCCATCAAGGCTTTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 ENSMUST00000174411.2 |
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| CDS TCA 72 bp | GCACTTTCTGTACCAGCTGACTCTTGTTGTCCGAATTaGGCTGTCCGAGGCAAAAGCCATTCCCCTGAGGTA | + |
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Preference number: 6 (lower is better) Translates to: ALSVPADSCCPN*AVRGKSHSPEV Trigger: TACCTCAGGGGAATGGCTTTTGCCTCGGACAGCTCAATTCGGACAACAAGAGTCAGCTGGTACAGAAAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 ENSMUST00000174411.2 |
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| CDS TCA 72 bp | GCTGCAGGCTGTAGGCTTTCTCATAGTCAAAAGCCTTaGTGGAGAAACCAGGGAACACTTTGTGCACCAACA | + |
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Preference number: 6 (lower is better) Translates to: AAGCRLSHSQKP*WRNQGTLCAPT Trigger: TGTTGGTGCACAAAGTGTTCCCTGGTTTCTCCATCAAGGCTTTTGACTATGAGAAAGCCTACAGCCTGCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026999.10 ENSMUST00000168918.8 ENSMUST00000174411.2 |
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