Pregenerated sensors for SMAD6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036867Ensembl transcript IDs: ENSMUST00000041029.6, ENSMUST00000179458.2
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GAAAGAATTACAAGCCAAAGTGCGTCTTTCTTGTTTCTCCATATACACACATTGGGGCGAGGTTGTCCCTaGGGTGGTGTCTCTGGGCGC | + |
|
Preference number: 2 (lower is better) Translates to: ERITSQSASFLFLHIHTLGRGCP*GGVSGR Trigger: GCGCCCAGAGACACCACCCCAGGGACAACCTCGCCC...CAATGTGTGTATATGGAGAAACAAGAAAGACGCACTTTGGCTTGTAATTCTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS-3UTR CCA 90 bp | GAAAGAATTACAAGCCAAAGTGCGTCTTTCTTGTTTCTCCATATACACACATTGGAGCAGCAGCTGCGGTaGCGCGGGCTGGCCGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: ERITSQSASFLFLHIHTLEQQLR*RGLAAQ Trigger: TTGGGCGGCCAGCCCGCGCCACCGCAGCTGCTGCTC...CAATGTGTGTATATGGAGAAACAAGAAAGACGCACTTTGGCTTGTAATTCTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS-3UTR CCA 90 bp | GAAAGAATTACAAGCCAAAGTGCGTCTTTCTTGTTTCTCCATATACACACATTGGGTTGCAACACACCGTaGGCCCGTCGGCGGCGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: ERITSQSASFLFLHIHTLGCNTP*ARRRRR Trigger: CCGCCGCCGCCGACGGGCCCACGGTGTGTTGCAACC...CAATGTGTGTATATGGAGAAACAAGAAAGACGCACTTTGGCTTGTAATTCTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS-3UTR GCA 90 bp | GAAAGAATTACAAGCCAAAGTGCGTCTTTCTTGTTTCTCCATATACACACATTGCACCGCCGCCGCCGCTaGCTTCCTCCCGATCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: ERITSQSASFLFLHIHTLHRRRR*LPPDQG Trigger: TCCCTGATCGGGAGGAAGGCAGCGGCGGCGGCGGTG...CAATGTGTGTATATGGAGAAACAAGAAAGACGCACTTTGGCTTGTAATTCTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS-3UTR GCA 90 bp | GAAAGAATTACAAGCCAAAGTGCGTCTTTCTTGTTTCTCCATATACACACATTGAACCCGGTGGCACCTTaGGCACGACCAGGGCGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: ERITSQSASFLFLHIHTLNPVAP*ARPGRG Trigger: GCCGCGCCCTGGTCGTGCGCAAGGTGCCACCGGGTT...CAATGTGTGTATATGGAGAAACAAGAAAGACGCACTTTGGCTTGTAATTCTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS-3UTR GCA 90 bp | GAAAGAATTACAAGCCAAAGTGCGTCTTTCTTGTTTCTCCATATACACACATTGGGACTTCGGAGCGGCTaGAGCCTCCGCCCTCTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: ERITSQSASFLFLHIHTLGLRSG*SLRPLV Trigger: CACGAGAGGGCGGAGGCTGCAGCCGCTCCGAAGTCC...CAATGTGTGTATATGGAGAAACAAGAAAGACGCACTTTGGCTTGTAATTCTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS-3UTR GCA 90 bp | GAAAGAATTACAAGCCAAAGTGCGTCTTTCTTGTTTCTCCATATACACACATTGCCCACGCGTGTCCGGTaGTCCCAGTACGCCACGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ERITSQSASFLFLHIHTLPTRVR*SQYATL Trigger: CAGCGTGGCGTACTGGGAGCACCGGACACGCGTGGG...CAATGTGTGTATATGGAGAAACAAGAAAGACGCACTTTGGCTTGTAATTCTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS-3UTR CCA 90 bp | GAAAGAATTACAAGCCAAAGTGCGTCTTTCTTGTTTCTCCATATACACACATTGTGCGTGCTGCAGGTCTaGCCAGCGGAAGAGGCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ERITSQSASFLFLHIHTLCVLQV*PAEEAA Trigger: GGCCGCCTCTTCCGCTGGCCAGACCTGCAGCACGCA...CAATGTGTGTATATGGAGAAACAAGAAAGACGCACTTTGGCTTGTAATTCTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS-3UTR TCA 90 bp | GAAAGAATTACAAGCCAAAGTGCGTCTTTCTTGTTTCTCCATATACACACATTGGCCCGCAGAGCCGGCTaGAGTGGTAGGGGTTGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: ERITSQSASFLFLHIHTLARRAG*SGRGCN Trigger: GTTGCAACCCCTACCACTTCAGCCGGCTCTGCGGGC...CAATGTGTGTATATGGAGAAACAAGAAAGACGCACTTTGGCTTGTAATTCTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS-3UTR TCA 90 bp | GAAAGAATTACAAGCCAAAGTGCGTCTTTCTTGTTTCTCCATATACACACATTGTGCGCTGCTCCAGGTTaGGCTGGCCCAGGCAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ERITSQSASFLFLHIHTLCAAPG*AGPGRS Trigger: GCTTCTGCCTGGGCCAGCTCAACCTGGAGCAGCGCA...CAATGTGTGTATATGGAGAAACAAGAAAGACGCACTTTGGCTTGTAATTCTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS-3UTR TCA 90 bp | GAAAGAATTACAAGCCAAAGTGCGTCTTTCTTGTTTCTCCATATACACACATTGCCAGCGTCGGGGAGTTaGCGAAGATGGGGTGCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: ERITSQSASFLFLHIHTLPASGS*RRWGAR Trigger: GCGAGCACCCCATCTTCGTCAACTCCCCGACGCTGG...CAATGTGTGTATATGGAGAAACAAGAAAGACGCACTTTGGCTTGTAATTCTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS-3UTR GCA 90 bp | GAAAGAATTACAAGCCAAAGTGCGTCTTTCTTGTTTCTCCATATACACACATTGCAGGCTCAGCTCGGCTaGCCAGGCTCCCATCCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: ERITSQSASFLFLHIHTLQAQLG*PGSHPR Trigger: ACGAGGATGGGAGCCTGGGCAGCCGAGCTGAGCCTG...CAATGTGTGTATATGGAGAAACAAGAAAGACGCACTTTGGCTTGTAATTCTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS-3UTR GCA 90 bp | GAAAGAATTACAAGCCAAAGTGCGTCTTTCTTGTTTCTCCATATACACACATTGCCCAGTACGCCACGCTaGACCAGTGGCTCGGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ERITSQSASFLFLHIHTLPSTPR*TSGSAW Trigger: CCAAGCCGAGCCACTGGTGCAGCGTGGCGTACTGGG...CAATGTGTGTATATGGAGAAACAAGAAAGACGCACTTTGGCTTGTAATTCTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS-3UTR GCA 90 bp | GAAAGAATTACAAGCCAAAGTGCGTCTTTCTTGTTTCTCCATATACACACATTGCGATCTTGCTGCGCGTaGGCCGCACCGACTCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: ERITSQSASFLFLHIHTLRSCCA*AAPTHC Trigger: GCAGTGAGTCGGTGCGGCGCACGCGCAGCAAGATCG...CAATGTGTGTATATGGAGAAACAAGAAAGACGCACTTTGGCTTGTAATTCTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS-3UTR CCA 90 bp | GAAAGAATTACAAGCCAAAGTGCGTCTTTCTTGTTTCTCCATATACACACATTGGCCACGCTGCACCAGTaGCTCGGCTTGGTGGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: ERITSQSASFLFLHIHTLATLHQ*LGLVAS Trigger: GGATGCCACCAAGCCGAGCCACTGGTGCAGCGTGGC...CAATGTGTGTATATGGAGAAACAAGAAAGACGCACTTTGGCTTGTAATTCTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS-3UTR TCA 90 bp | GAAAGAATTACAAGCCAAAGTGCGTCTTTCTTGTTTCTCCATATACACACATTGAGCCCTTGGCGAAGCTaGTGCGCACACTGTGCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ERITSQSASFLFLHIHTLSPWRS*CAHCAG Trigger: ACCCGCACAGTGTGCGCATCAGCTTCGCCAAGGGCT...CAATGTGTGTATATGGAGAAACAAGAAAGACGCACTTTGGCTTGTAATTCTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS-3UTR GCA 90 bp | GAAAGAATTACAAGCCAAAGTGCGTCTTTCTTGTTTCTCCATATACACACATTGTTCAGCTCCACTGCGTaGTGCAGGTCTGGCCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: ERITSQSASFLFLHIHTLFSSTA*CRSGQR Trigger: CCGCTGGCCAGACCTGCAGCACGCAGTGGAGCTGAA...CAATGTGTGTATATGGAGAAACAAGAAAGACGCACTTTGGCTTGTAATTCTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS-3UTR GCA 90 bp | GAAAGAATTACAAGCCAAAGTGCGTCTTTCTTGTTTCTCCATATACACACATTGACCGACTCACTGCGCTaGTCCAGGTTGAGCTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ERITSQSASFLFLHIHTLTDSLR*SRLSWP Trigger: GGGCCAGCTCAACCTGGAGCAGCGCAGTGAGTCGGT...CAATGTGTGTATATGGAGAAACAAGAAAGACGCACTTTGGCTTGTAATTCTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS-3UTR CCA 90 bp | GAAAGAATTACAAGCCAAAGTGCGTCTTTCTTGTTTCTCCATATACACACATTGGCGGCGGTAAAGCTGTaGCAGCCGCACAGGGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ERITSQSASFLFLHIHTLAAVKL*QPHRGF Trigger: GAAACCCCTGTGCGGCTGCCACAGCTTTACCGCCGC...CAATGTGTGTATATGGAGAAACAAGAAAGACGCACTTTGGCTTGTAATTCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS-3UTR CCA 90 bp | GAAAGAATTACAAGCCAAAGTGCGTCTTTCTTGTTTCTCCATATACACACATTGTGCTCCAGGTTGAGCTaGCCCAGGCAGAAGCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ERITSQSASFLFLHIHTLCSRLS*PRQKPL Trigger: CAGCGGCTTCTGCCTGGGCCAGCTCAACCTGGAGCA...CAATGTGTGTATATGGAGAAACAAGAAAGACGCACTTTGGCTTGTAATTCTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS-3UTR TCA 90 bp | GAAAGAATTACAAGCCAAAGTGCGTCTTTCTTGTTTCTCCATATACACACATTGGTGCTGCAGCAGCCCTaGGCGCTCAAAGTCGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: ERITSQSASFLFLHIHTLVLQQP*ALKVEH Trigger: GTGTTCGACTTTGAGCGCTCAGGGCTGCTGCAGCAC...CAATGTGTGTATATGGAGAAACAAGAAAGACGCACTTTGGCTTGTAATTCTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS-3UTR GCA 90 bp | GAAAGAATTACAAGCCAAAGTGCGTCTTTCTTGTTTCTCCATATACACACATTGGGGTTTCAGCTCCACTaGGTGCTGCAGGTCTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ERITSQSASFLFLHIHTLGFQLH*VLQVWP Trigger: TGGCCAGACCTGCAGCACGCAGTGGAGCTGAAACCC...CAATGTGTGTATATGGAGAAACAAGAAAGACGCACTTTGGCTTGTAATTCTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS-3UTR GCA 90 bp | GAAAGAATTACAAGCCAAAGTGCGTCTTTCTTGTTTCTCCATATACACACATTGCCAGGCAGAAGCCGCTaGCCTGAGGTAGGTCGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: ERITSQSASFLFLHIHTLPGRSR*PEVGRR Trigger: TCTACGACCTACCTCAGGGCAGCGGCTTCTGCCTGG...CAATGTGTGTATATGGAGAAACAAGAAAGACGCACTTTGGCTTGTAATTCTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS-3UTR GCA 90 bp | GAAAGAATTACAAGCCAAAGTGCGTCTTTCTTGTTTCTCCATATACACACATTGCAAAACCGATCTTGCTaGGCGTGCGCCGCACCGACT | + |
|
Preference number: 4 (lower is better) Translates to: ERITSQSASFLFLHIHTLQNRSC*ACAAPT Trigger: AGTCGGTGCGGCGCACGCGCAGCAAGATCGGTTTTG...CAATGTGTGTATATGGAGAAACAAGAAAGACGCACTTTGGCTTGTAATTCTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS-3UTR CCA 90 bp | GAAAGAATTACAAGCCAAAGTGCGTCTTTCTTGTTTCTCCATATACACACATTGAGTGGCTCGGCTTGGTaGCATCCGGAGACATGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ERITSQSASFLFLHIHTLSGSAW*HPETCW Trigger: CCAGCATGTCTCCGGATGCCACCAAGCCGAGCCACT...CAATGTGTGTATATGGAGAAACAAGAAAGACGCACTTTGGCTTGTAATTCTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS-3UTR CCA 90 bp | GAAAGAATTACAAGCCAAAGTGCGTCTTTCTTGTTTCTCCATATACACACATTGACCAGTGGCTCGGCTTaGTGGCATCCGGAGACATGC | + |
|
Preference number: 4 (lower is better) Translates to: ERITSQSASFLFLHIHTLTSGSA*WHPETC Trigger: GCATGTCTCCGGATGCCACCAAGCCGAGCCACTGGT...CAATGTGTGTATATGGAGAAACAAGAAAGACGCACTTTGGCTTGTAATTCTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS-3UTR CCA 90 bp | GAAAGAATTACAAGCCAAAGTGCGTCTTTCTTGTTTCTCCATATACACACATTGGGCCCACACGCCGTCTaGCTCCTTGCTGAGCAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: ERITSQSASFLFLHIHTLGPHAV*LLAEQY Trigger: ATACTGCTCAGCAAGGAGCCAGACGGCGTGTGGGCC...CAATGTGTGTATATGGAGAAACAAGAAAGACGCACTTTGGCTTGTAATTCTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS-3UTR CCA 90 bp | GAAAGAATTACAAGCCAAAGTGCGTCTTTCTTGTTTCTCCATATACACACATTGGATGGAGTAACCCGGTaGCACCTTGCGCACGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: ERITSQSASFLFLHIHTLDGVTR*HLAHDQ Trigger: CTGGTCGTGCGCAAGGTGCCACCGGGTTACTCCATC...CAATGTGTGTATATGGAGAAACAAGAAAGACGCACTTTGGCTTGTAATTCTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS-3UTR TCA 90 bp | GAAAGAATTACAAGCCAAAGTGCGTCTTTCTTGTTTCTCCATATACACACATTGGGTCGTAGAAAATGCTaGCAGCCTGGTCGTACACCG | + |
|
Preference number: 4 (lower is better) Translates to: ERITSQSASFLFLHIHTLGRRKC*QPGRTP Trigger: CGGTGTACGACCAGGCTGTCAGCATTTTCTACGACC...CAATGTGTGTATATGGAGAAACAAGAAAGACGCACTTTGGCTTGTAATTCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS-3UTR TCA 90 bp | GAAAGAATTACAAGCCAAAGTGCGTCTTTCTTGTTTCTCCATATACACACATTGCGTCTGGCTCCTTGCTaGGCAGTATGCCAAAACCGA | + |
|
Preference number: 4 (lower is better) Translates to: ERITSQSASFLFLHIHTLRLAPC*AVCQNR Trigger: TCGGTTTTGGCATACTGCTCAGCAAGGAGCCAGACG...CAATGTGTGTATATGGAGAAACAAGAAAGACGCACTTTGGCTTGTAATTCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS-3UTR CCA 90 bp | GAAAGAATTACAAGCCAAAGTGCGTCTTTCTTGTTTCTCCATATACACACATTGTCCAGTGGCTTGTACTaGTCAGGAGGAGACAGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: ERITSQSASFLFLHIHTLSSGLY*SGGDSR Trigger: TCGGCTGTCTCCTCCTGACCAGTACAAGCCACTGGA...CAATGTGTGTATATGGAGAAACAAGAAAGACGCACTTTGGCTTGTAATTCTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS-3UTR TCA 90 bp | GAAAGAATTACAAGCCAAAGTGCGTCTTTCTTGTTTCTCCATATACACACATTGCAAAGTCGAACACCTTaGTGGAGTAACCCGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ERITSQSASFLFLHIHTLQSRTP*WSNPVA Trigger: TGCCACCGGGTTACTCCATCAAGGTGTTCGACTTTG...CAATGTGTGTATATGGAGAAACAAGAAAGACGCACTTTGGCTTGTAATTCTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS-3UTR CCA 90 bp | GAAAGAATTACAAGCCAAAGTGCGTCTTTCTTGTTTCTCCATATACACACATTGCATCCGGAGACATGCTaGCATCTGAGAATTCACCCG | + |
|
Preference number: 4 (lower is better) Translates to: ERITSQSASFLFLHIHTLHPETC*HLRIHP Trigger: CGGGTGAATTCTCAGATGCCAGCATGTCTCCGGATG...CAATGTGTGTATATGGAGAAACAAGAAAGACGCACTTTGGCTTGTAATTCTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS-3UTR GCA 90 bp | GAAAGAATTACAAGCCAAAGTGCGTCTTTCTTGTTTCTCCATATACACACATTGTGGCATCCGGAGACATaGTGGCATCTGAGAATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ERITSQSASFLFLHIHTLWHPET*WHLRIH Trigger: GTGAATTCTCAGATGCCAGCATGTCTCCGGATGCCA...CAATGTGTGTATATGGAGAAACAAGAAAGACGCACTTTGGCTTGTAATTCTTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS CCA 90 bp | CTGCAGGTCTGGCCAGCGGAAGAGGCGGCCGAGCAGCAGCTGCGGTaGCGCGGGCTGGCCGCCCAAGCGGAGGTCGGCGCGCGGCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: LQVWPAEEAAEQQLR*RGLAAQAEVGARHQ Trigger: CTGGTGCCGCGCGCCGACCTCCGCTTGGGCGGCCAGCCCGCGCCACCGCAGCTGCTGCTCGGCCGCCTCTTCCGCTGGCCAGACCTGCAG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS CCA 90 bp | CTCCGAGGCCCGCCGCCCTCCTCCGGCTCCGGGGACTGTCTGGCTTaGGGATCGCCAGAGTCCCGGGGCGCGCCTGCTGCGTCCCGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: LRGPPPSSGSGDCLA*GSPESRGAPAASRS Trigger: CGAACGGGACGCAGCAGGCGCGCCCCGGGACTCTGGCGATCCCCAAGCCAGACAGTCCCCGGAGCCGGAGGAGGGCGGCGGGCCTCGGAG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS GCA 90 bp | GGCTACCGAGCGGACTTCGGAGCGGCTGCAGCCTCCGCCCTCTCGTaGCCGCGGGGCAGGCTCAGCTCGGCTGCCCAGGCTCCCATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GYRADFGAAAASALS*PRGRLSSAAQAPIL Trigger: GAGGATGGGAGCCTGGGCAGCCGAGCTGAGCCTGCCCCGCGGGCACGAGAGGGCGGAGGCTGCAGCCGCTCCGAAGTCCGCTCGGTAGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS GCA 90 bp | GGCGGCGGTAAAGCTGTGGCAGCCGCACAGGGGTTTCAGCTCCACTaGGTGCTGCAGGTCTGGCCAGCGGAAGAGGCGGCCGAGCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GGGKAVAAAQGFQLH*VLQVWPAEEAAEQQ Trigger: CTGCTGCTCGGCCGCCTCTTCCGCTGGCCAGACCTGCAGCACGCAGTGGAGCTGAAACCCCTGTGCGGCTGCCACAGCTTTACCGCCGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS CCA 90 bp | GGTCCCAGCGAGGTTTGGCGAGGCAGCGCCCGGCGGCTCTTTCTCTaGACTCAGCTCCCTCGCTCGTTCCCCCTCTCGGCGCTCTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: GPSEVWRGSARRLFL*TQLPRSFPLSALSL Trigger: GAGAGAGAGCGCCGAGAGGGGGAACGAGCGAGGGAGCTGAGTCCAGAGAAAGAGCCGCCGGGCGCTGCCTCGCCAAACCTCGCTGGGACC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179458.2 |
||
| CDS GCA 90 bp | GGACTGTCTGGCTTGGGGATCGCCAGAGTCCCGGGGCGCGCCTGCTaGGTCCCGTTCGGAGAAGAGACAGCAGGTCACCGTCTCGCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: GLSGLGIARVPGRAC*VPFGEETAGHRLAV Trigger: GACTGCGAGACGGTGACCTGCTGTCTCTTCTCCGAACGGGACGCAGCAGGCGCGCCCCGGGACTCTGGCGATCCCCAAGCCAGACAGTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS GCA 90 bp | GCGGTAAAGCTGTGGCAGCCGCACAGGGGTTTCAGCTCCACTGCGTaGTGCAGGTCTGGCCAGCGGAAGAGGCGGCCGAGCAGCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: AVKLWQPHRGFSSTA*CRSGQRKRRPSSSC Trigger: GCAGCTGCTGCTCGGCCGCCTCTTCCGCTGGCCAGACCTGCAGCACGCAGTGGAGCTGAAACCCCTGTGCGGCTGCCACAGCTTTACCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS CCA 90 bp | GGGTTGCAACACACCGTGGGCCCGTCGGCGGCGGCGGTAAAGCTGTaGCAGCCGCACAGGGGTTTCAGCTCCACTGCGTGCTGCAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: GLQHTVGPSAAAVKL*QPHRGFSSTACCRS Trigger: AGACCTGCAGCACGCAGTGGAGCTGAAACCCCTGTGCGGCTGCCACAGCTTTACCGCCGCCGCCGACGGGCCCACGGTGTGTTGCAACCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS CCA 90 bp | CTTCACCAAAGTGCCTCCTGGTGGCCCCGCGGTCCCAGCGAGGTTTaGCGAGGCAGCGCCCGGCGGCTCTTTCTCTGGACTCAGCTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: LHQSASWWPRGPSEV*RGSARRLFLWTQLP Trigger: AGGGAGCTGAGTCCAGAGAAAGAGCCGCCGGGCGCTGCCTCGCCAAACCTCGCTGGGACCGCGGGGCCACCAGGAGGCACTTTGGTGAAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179458.2 |
||
| CDS TCA 90 bp | GGTGCTCGCCCCGGTTGTAGGCCCACACGCCGTCTGGCTCCTTGCTaGGCAGTATGCCAAAACCGATCTTGCTGCGCGTGCGCCGCACCG | + |
|
Preference number: 5 (lower is better) Translates to: GARPGCRPTRRLAPC*AVCQNRSCCACAAP Trigger: CGGTGCGGCGCACGCGCAGCAAGATCGGTTTTGGCATACTGCTCAGCAAGGAGCCAGACGGCGTGTGGGCCTACAACCGGGGCGAGCACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS GCA 90 bp | GTAAAGCTGTGGCAGCCGCACAGGGGTTTCAGCTCCACTGCGTGCTaGAGGTCTGGCCAGCGGAAGAGGCGGCCGAGCAGCAGCTGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: VKLWQPHRGFSSTAC*RSGQRKRRPSSSCG Trigger: ACCGCAGCTGCTGCTCGGCCGCCTCTTCCGCTGGCCAGACCTGCAGCACGCAGTGGAGCTGAAACCCCTGTGCGGCTGCCACAGCTTTAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS GCA 90 bp | CATAGAGGCGGCCCACGCGTGTCCGGTGCTCCCAGTACGCCACGCTaGACCAGTGGCTCGGCTTGGTGGCATCCGGAGACATGCTGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: HRGGPRVSGAPSTPR*TSGSAWWHPETCWH Trigger: ATGCCAGCATGTCTCCGGATGCCACCAAGCCGAGCCACTGGTGCAGCGTGGCGTACTGGGAGCACCGGACACGCGTGGGCCGCCTCTATG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS TCA 90 bp | CGTCTGCGTGCTGCAGCAGCCCTGAGCGCTCAAAGTCGAACACCTTaGTGGAGTAACCCGGTGGCACCTTGCGCACGACCAGGGCGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: RLRAAAALSAQSRTP*WSNPVAPCARPGRG Trigger: GCCGCGCCCTGGTCGTGCGCAAGGTGCCACCGGGTTACTCCATCAAGGTGTTCGACTTTGAGCGCTCAGGGCTGCTGCAGCACGCAGACG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS TCA 90 bp | CGGGTCGTAGGGGCCGTGAGCGGCGTCTGCGTGCTGCAGCAGCCCTaGGCGCTCAAAGTCGAACACCTTGATGGAGTAACCCGGTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RVVGAVSGVCVLQQP*ALKVEHLDGVTRWH Trigger: GTGCCACCGGGTTACTCCATCAAGGTGTTCGACTTTGAGCGCTCAGGGCTGCTGCAGCACGCAGACGCCGCTCACGGCCCCTACGACCCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS CCA 90 bp | CGGCCCACGCGTGTCCGGTGCTCCCAGTACGCCACGCTGCACCAGTaGCTCGGCTTGGTGGCATCCGGAGACATGCTGGCATCTGAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: RPTRVRCSQYATLHQ*LGLVASGDMLASEN Trigger: ATTCTCAGATGCCAGCATGTCTCCGGATGCCACCAAGCCGAGCCACTGGTGCAGCGTGGCGTACTGGGAGCACCGGACACGCGTGGGCCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS GCA 90 bp | TCCTTGAGCCTCTTGAGCAGCGAGTACGTGACCGTCTTGAGCTCCTaGTCCAGAAGCAGCAGTCGCGAGCGGGCTTCGCGACTCCGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SLSLLSSEYVTVLSS*SRSSSRERASRLRG Trigger: GCCTCGGAGTCGCGAAGCCCGCTCGCGACTGCTGCTTCTGGAGCAGGAGCTCAAGACGGTCACGTACTCGCTGCTCAAGAGGCTCAAGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS CCA 90 bp | GTGTCCGGTGCTCCCAGTACGCCACGCTGCACCAGTGGCTCGGCTTaGTGGCATCCGGAGACATGCTGGCATCTGAGAATTCACCCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: VSGAPSTPRCTSGSA*WHPETCWHLRIHPE Trigger: CTCCGGGTGAATTCTCAGATGCCAGCATGTCTCCGGATGCCACCAAGCCGAGCCACTGGTGCAGCGTGGCGTACTGGGAGCACCGGACAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS-3UTR CAA 90 bp | GAAAGAATTACAAGCCAAAGTGCGTCTTTCTTGTTTCTCCATATACACACATTGCAGGGTCCCCAGCCCTaGGCGAAGCTGATGCGCACA | + |
|
Preference number: 5 (lower is better) Translates to: ERITSQSASFLFLHIHTLQGPQP*AKLMRT Trigger: TGTGCGCATCAGCTTCGCCAAGGGCTGGGGACCCTG...CAATGTGTGTATATGGAGAAACAAGAAAGACGCACTTTGGCTTGTAATTCTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS-3UTR CAA 90 bp | GAAAGAATTACAAGCCAAAGTGCGTCTTTCTTGTTTCTCCATATACACACATTGCACCAGTGGCTCGGCTaGGTGGCATCCGGAGACATG | + |
|
Preference number: 5 (lower is better) Translates to: ERITSQSASFLFLHIHTLHQWLG*VASGDM Trigger: CATGTCTCCGGATGCCACCAAGCCGAGCCACTGGTG...CAATGTGTGTATATGGAGAAACAAGAAAGACGCACTTTGGCTTGTAATTCTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS-3UTR CAA 90 bp | GAAAGAATTACAAGCCAAAGTGCGTCTTTCTTGTTTCTCCATATACACACATTGTCCAGCGTCGGGGAGTaGACGAAGATGGGGTGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: ERITSQSASFLFLHIHTLSSVGE*TKMGCS Trigger: CGAGCACCCCATCTTCGTCAACTCCCCGACGCTGGA...CAATGTGTGTATATGGAGAAACAAGAAAGACGCACTTTGGCTTGTAATTCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS-3UTR CAA 90 bp | GAAAGAATTACAAGCCAAAGTGCGTCTTTCTTGTTTCTCCATATACACACATTGCGCTCCTTGAGCCTCTaGAGCAGCGAGTACGTGACC | + |
|
Preference number: 5 (lower is better) Translates to: ERITSQSASFLFLHIHTLRSLSL*SSEYVT Trigger: GGTCACGTACTCGCTGCTCAAGAGGCTCAAGGAGCG...CAATGTGTGTATATGGAGAAACAAGAAAGACGCACTTTGGCTTGTAATTCTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS-3UTR CAA 90 bp | GAAAGAATTACAAGCCAAAGTGCGTCTTTCTTGTTTCTCCATATACACACATTGGAGTACGTGACCGTCTaGAGCTCCTGCTCCAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: ERITSQSASFLFLHIHTLEYVTV*SSCSRS Trigger: GCTTCTGGAGCAGGAGCTCAAGACGGTCACGTACTC...CAATGTGTGTATATGGAGAAACAAGAAAGACGCACTTTGGCTTGTAATTCTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS-3UTR CAA 90 bp | GAAAGAATTACAAGCCAAAGTGCGTCTTTCTTGTTTCTCCATATACACACATTGGCAGTGATGAGGGAGTaGGTGGCCTCGGTTTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: ERITSQSASFLFLHIHTLAVMRE*VASVSV Trigger: CACTGAAACCGAGGCCACCAACTCCCTCATCACTGC...CAATGTGTGTATATGGAGAAACAAGAAAGACGCACTTTGGCTTGTAATTCTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS-3UTR CAA 90 bp | GAAAGAATTACAAGCCAAAGTGCGTCTTTCTTGTTTCTCCATATACACACATTGACGCCGTCTGGCTCCTaGCTGAGCAGTATGCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: ERITSQSASFLFLHIHTLTPSGS*LSSMPK Trigger: TTTTGGCATACTGCTCAGCAAGGAGCCAGACGGCGT...CAATGTGTGTATATGGAGAAACAAGAAAGACGCACTTTGGCTTGTAATTCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS CCA 72 bp | CCGCCGCCCTCCTCCGGCTCCGGGGACTGTCTGGCTTaGGGATCGCCAGAGTCCCGGGGCGCGCCTGCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: PPPSSGSGDCLA*GSPESRGAPAA Trigger: CGCAGCAGGCGCGCCCCGGGACTCTGGCGATCCCCAAGCCAGACAGTCCCCGGAGCCGGAGGAGGGCGGCGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS CCA 72 bp | ACCGAAGCAGAGGTCGCAGCCCGCCCCACGCTGCGCTaGGTCGCTTCGGGCGCCGCGGCTGCCGAGGTCGCC | + |
|
Preference number: 6 (lower is better) Translates to: TEAEVAARPTLR*VASGAAAAEVA Trigger: GGCGACCTCGGCAGCCGCGGCGCCCGAAGCGACCCAGCGCAGCGTGGGGCGGGCTGCGACCTCTGCTTCGGT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179458.2 |
||
| CDS GCA 72 bp | GCGGACTTCGGAGCGGCTGCAGCCTCCGCCCTCTCGTaGCCGCGGGGCAGGCTCAGCTCGGCTGCCCAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: ADFGAAAASALS*PRGRLSSAAQA Trigger: AGCCTGGGCAGCCGAGCTGAGCCTGCCCCGCGGGCACGAGAGGGCGGAGGCTGCAGCCGCTCCGAAGTCCGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS GCA 72 bp | AATCCACCGAAGCAGAGGTCGCAGCCCGCCCCACGCTaGGCTGGGTCGCTTCGGGCGCCGCGGCTGCCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: NPPKQRSQPAPR*AGSLRAPRLPR Trigger: CCTCGGCAGCCGCGGCGCCCGAAGCGACCCAGCGCAGCGTGGGGCGGGCTGCGACCTCTGCTTCGGTGGATT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179458.2 |
||
| CDS CCA 72 bp | CACACCGTGGGCCCGTCGGCGGCGGCGGTAAAGCTGTaGCAGCCGCACAGGGGTTTCAGCTCCACTGCGTGC | + |
|
Preference number: 6 (lower is better) Translates to: HTVGPSAAAVKL*QPHRGFSSTAC Trigger: GCACGCAGTGGAGCTGAAACCCCTGTGCGGCTGCCACAGCTTTACCGCCGCCGCCGACGGGCCCACGGTGTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS CCA 72 bp | AGTGCCTCCTGGTGGCCCCGCGGTCCCAGCGAGGTTTaGCGAGGCAGCGCCCGGCGGCTCTTTCTCTGGACT | + |
|
Preference number: 6 (lower is better) Translates to: SASWWPRGPSEV*RGSARRLFLWT Trigger: AGTCCAGAGAAAGAGCCGCCGGGCGCTGCCTCGCCAAACCTCGCTGGGACCGCGGGGCCACCAGGAGGCACT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179458.2 |
||
| CDS CAA 72 bp | AAGTGCCTCCTGGTGGCCCCGCGGTCCCAGCGAGGTTaGGCGAGGCAGCGCCCGGCGGCTCTTTCTCTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: KCLLVAPRSQRG*ARQRPAALSLD Trigger: GTCCAGAGAAAGAGCCGCCGGGCGCTGCCTCGCCAAACCTCGCTGGGACCGCGGGGCCACCAGGAGGCACTT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179458.2 |
||
| CDS CAA 90 bp | CCTTCACCAAAGTGCCTCCTGGTGGCCCCGCGGTCCCAGCGAGGTTaGGCGAGGCAGCGCCCGGCGGCTCTTTCTCTGGACTCAGCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: PSPKCLLVAPRSQRG*ARQRPAALSLDSAP Trigger: GGGAGCTGAGTCCAGAGAAAGAGCCGCCGGGCGCTGCCTCGCCAAACCTCGCTGGGACCGCGGGGCCACCAGGAGGCACTTTGGTGAAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179458.2 |
||
| CDS TCA 72 bp | GCGTGCGCCGCACCGACTCACTGCGCTGCTCCAGGTTaGGCTGGCCCAGGCAGAAGCCGCTGCCCTGAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: ACAAPTHCAAPG*AGPGRSRCPEV Trigger: TACCTCAGGGCAGCGGCTTCTGCCTGGGCCAGCTCAACCTGGAGCAGCGCAGTGAGTCGGTGCGGCGCACGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS GCA 72 bp | GGCTTGGGGATCGCCAGAGTCCCGGGGCGCGCCTGCTaGGTCCCGTTCGGAGAAGAGACAGCAGGTCACCGT | + |
|
Preference number: 6 (lower is better) Translates to: GLGIARVPGRAC*VPFGEETAGHR Trigger: ACGGTGACCTGCTGTCTCTTCTCCGAACGGGACGCAGCAGGCGCGCCCCGGGACTCTGGCGATCCCCAAGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS GCA 72 bp | TGGCAGCCGCACAGGGGTTTCAGCTCCACTGCGTGCTaGAGGTCTGGCCAGCGGAAGAGGCGGCCGAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: WQPHRGFSSTAC*RSGQRKRRPSS Trigger: GCTGCTCGGCCGCCTCTTCCGCTGGCCAGACCTGCAGCACGCAGTGGAGCTGAAACCCCTGTGCGGCTGCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS GCA 72 bp | CTGTGGCAGCCGCACAGGGGTTTCAGCTCCACTGCGTaGTGCAGGTCTGGCCAGCGGAAGAGGCGGCCGAGC | + |
|
Preference number: 6 (lower is better) Translates to: LWQPHRGFSSTA*CRSGQRKRRPS Trigger: GCTCGGCCGCCTCTTCCGCTGGCCAGACCTGCAGCACGCAGTGGAGCTGAAACCCCTGTGCGGCTGCCACAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS GCA 72 bp | GGCCCACGCGTGTCCGGTGCTCCCAGTACGCCACGCTaGACCAGTGGCTCGGCTTGGTGGCATCCGGAGACA | + |
|
Preference number: 6 (lower is better) Translates to: GPRVSGAPSTPR*TSGSAWWHPET Trigger: TGTCTCCGGATGCCACCAAGCCGAGCCACTGGTGCAGCGTGGCGTACTGGGAGCACCGGACACGCGTGGGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS CCA 72 bp | GCACAGGGGTTTCAGCTCCACTGCGTGCTGCAGGTCTaGCCAGCGGAAGAGGCGGCCGAGCAGCAGCTGCGG | + |
|
Preference number: 6 (lower is better) Translates to: AQGFQLHCVLQV*PAEEAAEQQLR Trigger: CCGCAGCTGCTGCTCGGCCGCCTCTTCCGCTGGCCAGACCTGCAGCACGCAGTGGAGCTGAAACCCCTGTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS CCA 72 bp | GAGGTTTGGCGAGGCAGCGCCCGGCGGCTCTTTCTCTaGACTCAGCTCCCTCGCTCGTTCCCCCTCTCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: EVWRGSARRLFL*TQLPRSFPLSA Trigger: CGCCGAGAGGGGGAACGAGCGAGGGAGCTGAGTCCAGAGAAAGAGCCGCCGGGCGCTGCCTCGCCAAACCTC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179458.2 |
||
| CDS TCA 72 bp | GTCGCGAGTAGCAGGGTCCCCAGCCCTTGGCGAAGCTaGTGCGCACACTGTGCGGGTCGTAGGGGCCGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: VASSRVPSPWRS*CAHCAGRRGRE Trigger: CTCACGGCCCCTACGACCCGCACAGTGTGCGCATCAGCTTCGCCAAGGGCTGGGGACCCTGCTACTCGCGAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS GCA 72 bp | AAAGCTGTGGCAGCCGCACAGGGGTTTCAGCTCCACTaGGTGCTGCAGGTCTGGCCAGCGGAAGAGGCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: KAVAAAQGFQLH*VLQVWPAEEAA Trigger: GGCCGCCTCTTCCGCTGGCCAGACCTGCAGCACGCAGTGGAGCTGAAACCCCTGTGCGGCTGCCACAGCTTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS CCA 72 bp | CGTGTCCGGTGCTCCCAGTACGCCACGCTGCACCAGTaGCTCGGCTTGGTGGCATCCGGAGACATGCTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: RVRCSQYATLHQ*LGLVASGDMLA Trigger: TGCCAGCATGTCTCCGGATGCCACCAAGCCGAGCCACTGGTGCAGCGTGGCGTACTGGGAGCACCGGACACG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS TCA 72 bp | GGGGCCGTGAGCGGCGTCTGCGTGCTGCAGCAGCCCTaGGCGCTCAAAGTCGAACACCTTGATGGAGTAACC | + |
|
Preference number: 6 (lower is better) Translates to: GAVSGVCVLQQP*ALKVEHLDGVT Trigger: GGTTACTCCATCAAGGTGTTCGACTTTGAGCGCTCAGGGCTGCTGCAGCACGCAGACGCCGCTCACGGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS CAA 90 bp | CGTGTCCGGTGCTCCCAGTACGCCACGCTGCACCAGTGGCTCGGCTaGGTGGCATCCGGAGACATGCTGGCATCTGAGAATTCACCCGGA | + |
|
Preference number: 6 (lower is better) Translates to: RVRCSQYATLHQWLG*VASGDMLASENSPG Trigger: TCCGGGTGAATTCTCAGATGCCAGCATGTCTCCGGATGCCACCAAGCCGAGCCACTGGTGCAGCGTGGCGTACTGGGAGCACCGGACACG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS CAA 90 bp | CACACGCCGTCTGGCTCCTTGCTGAGCAGTATGCCAAAACCGATCTaGCTGCGCGTGCGCCGCACCGACTCACTGCGCTGCTCCAGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: HTPSGSLLSSMPKPI*LRVRRTDSLRCSRL Trigger: CAACCTGGAGCAGCGCAGTGAGTCGGTGCGGCGCACGCGCAGCAAGATCGGTTTTGGCATACTGCTCAGCAAGGAGCCAGACGGCGTGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS CAA 90 bp | AGCGAACGCTCCTTGAGCCTCTTGAGCAGCGAGTACGTGACCGTCTaGAGCTCCTGCTCCAGAAGCAGCAGTCGCGAGCGGGCTTCGCGA | + |
|
Preference number: 6 (lower is better) Translates to: SERSLSLLSSEYVTV*SSCSRSSSRERASR Trigger: TCGCGAAGCCCGCTCGCGACTGCTGCTTCTGGAGCAGGAGCTCAAGACGGTCACGTACTCGCTGCTCAAGAGGCTCAAGGAGCGTTCGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS TCA 72 bp | CCCGGTTGTAGGCCCACACGCCGTCTGGCTCCTTGCTaGGCAGTATGCCAAAACCGATCTTGCTGCGCGTGC | + |
|
Preference number: 6 (lower is better) Translates to: PGCRPTRRLAPC*AVCQNRSCCAC Trigger: GCACGCGCAGCAAGATCGGTTTTGGCATACTGCTCAGCAAGGAGCCAGACGGCGTGTGGGCCTACAACCGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS GCA 72 bp | CTCTTGAGCAGCGAGTACGTGACCGTCTTGAGCTCCTaGTCCAGAAGCAGCAGTCGCGAGCGGGCTTCGCGA | + |
|
Preference number: 6 (lower is better) Translates to: LLSSEYVTVLSS*SRSSSRERASR Trigger: TCGCGAAGCCCGCTCGCGACTGCTGCTTCTGGAGCAGGAGCTCAAGACGGTCACGTACTCGCTGCTCAAGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS CAA 72 bp | TCTGGCTCCTTGCTGAGCAGTATGCCAAAACCGATCTaGCTGCGCGTGCGCCGCACCGACTCACTGCGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SGSLLSSMPKPI*LRVRRTDSLRC Trigger: GCAGCGCAGTGAGTCGGTGCGGCGCACGCGCAGCAAGATCGGTTTTGGCATACTGCTCAGCAAGGAGCCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS TCA 72 bp | GCTGCAGCAGCCCTGAGCGCTCAAAGTCGAACACCTTaGTGGAGTAACCCGGTGGCACCTTGCGCACGACCA | + |
|
Preference number: 6 (lower is better) Translates to: AAAALSAQSRTP*WSNPVAPCARP Trigger: TGGTCGTGCGCAAGGTGCCACCGGGTTACTCCATCAAGGTGTTCGACTTTGAGCGCTCAGGGCTGCTGCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS CCA 72 bp | CCCAGTACGCCACGCTGCACCAGTGGCTCGGCTTGGTaGCATCCGGAGACATGCTGGCATCTGAGAATTCAC | + |
|
Preference number: 6 (lower is better) Translates to: PSTPRCTSGSAW*HPETCWHLRIH Trigger: GTGAATTCTCAGATGCCAGCATGTCTCCGGATGCCACCAAGCCGAGCCACTGGTGCAGCGTGGCGTACTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS CCA 72 bp | GCTCCCAGTACGCCACGCTGCACCAGTGGCTCGGCTTaGTGGCATCCGGAGACATGCTGGCATCTGAGAATT | + |
|
Preference number: 6 (lower is better) Translates to: APSTPRCTSGSA*WHPETCWHLRI Trigger: AATTCTCAGATGCCAGCATGTCTCCGGATGCCACCAAGCCGAGCCACTGGTGCAGCGTGGCGTACTGGGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS CAA 72 bp | TGCTCCCAGTACGCCACGCTGCACCAGTGGCTCGGCTaGGTGGCATCCGGAGACATGCTGGCATCTGAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: CSQYATLHQWLG*VASGDMLASEN Trigger: ATTCTCAGATGCCAGCATGTCTCCGGATGCCACCAAGCCGAGCCACTGGTGCAGCGTGGCGTACTGGGAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS CAA 90 bp | TCCACAGCCTCCAACAGCGTGTCCAGCGAACGCTCCTTGAGCCTCTaGAGCAGCGAGTACGTGACCGTCTTGAGCTCCTGCTCCAGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: STASNSVSSERSLSL*SSEYVTVLSSCSRS Trigger: GCTTCTGGAGCAGGAGCTCAAGACGGTCACGTACTCGCTGCTCAAGAGGCTCAAGGAGCGTTCGCTGGACACGCTGTTGGAGGCTGTGGA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS TCA 72 bp | AGAAGCCGCTGCCCTGAGGTAGGTCGTAGAAAATGCTaGCAGCCTGGTCGTACACCGCATAGAGGCGGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: RSRCPEVGRRKC*QPGRTPHRGGP Trigger: TGGGCCGCCTCTATGCGGTGTACGACCAGGCTGTCAGCATTTTCTACGACCTACCTCAGGGCAGCGGCTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS CAA 72 bp | TCCAACAGCGTGTCCAGCGAACGCTCCTTGAGCCTCTaGAGCAGCGAGTACGTGACCGTCTTGAGCTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SNSVSSERSLSL*SSEYVTVLSSC Trigger: GCAGGAGCTCAAGACGGTCACGTACTCGCTGCTCAAGAGGCTCAAGGAGCGTTCGCTGGACACGCTGTTGGA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||
| CDS CAA 72 bp | TCCACAGCCTCCAACAGCGTGTCCAGCGAACGCTCCTaGAGCCTCTTGAGCAGCGAGTACGTGACCGTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: STASNSVSSERS*SLLSSEYVTVL Trigger: CAAGACGGTCACGTACTCGCTGCTCAAGAGGCTCAAGGAGCGTTCGCTGGACACGCTGTTGGAGGCTGTGGA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041029.6 |
||