Pregenerated sensors for SMAD4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024515Ensembl transcript IDs: ENSMUST00000025393.14, ENSMUST00000114939.2
Found 149 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGTGGCTTAACTGTGAGAACTTCTCAGCCTTACAATCAGCAGCTCTaGCTCTCCTCGGCATGCAAGGCGCTCGCACACACTAAAGGGCTG | + |
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Preference number: 1 (lower is better) Translates to: GGLTVRTSQPYNQQL*LSSACKALAHTKGL Trigger: CAGCCCTTTAGTGTGTGCGAGCGCCTTGCATGCCGAGGAGAGTCAGAGCTGCTGATTGTAAGGCTGAGAAGTTCTCACAGTTAAGCCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025393.14 |
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| 3UTR CCA 90 bp | CACGTGAGCACAGTGCGTTTAATAACTCGCCCACTAAGGGGCAGGTaGCTTAACTGTGAGAACTTCTCAGCCTTACAATCAGCAGCTCTG | + |
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Preference number: 1 (lower is better) Translates to: HVSTVRLITRPLRGR*LNCENFSALQSAAL Trigger: CAGAGCTGCTGATTGTAAGGCTGAGAAGTTCTCACAGTTAAGCCACCTGCCCCTTAGTGGGCGAGTTATTAAACGCACTGTGCTCACGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025393.14 |
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| 3UTR GCA 90 bp | TTAAATGGCATTTCTTTGACTGATAATTGTAAGGAATTGTCAATATaGACACAGATTAGTGTTTTGTCTTGGGGAAGAAACCCTGAAGTC | + |
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Preference number: 1 (lower is better) Translates to: LNGISLTDNCKELSI*TQISVLSWGRNPEV Trigger: GACTTCAGGGTTTCTTCCCCAAGACAAAACACTAATCTGTGTGCATATTGACAATTCCTTACAATTATCAGTCAAAGAAATGCCATTTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025393.14 |
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| 3UTR-3UTR CCA 90 bp | CAATGTGTCTTAACTCCTCCACTTCAATCTCTACAAAGTCACCGCCAAGTGATCATTAGTGTTTTGTCTTaGGGAAGAAACCCTGAAGTC | + |
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Preference number: 2 (lower is better) Translates to: QCVLTPPLQSLQSHRQVIISVLS*GRNPEV Trigger: GACTTCAGGGTTTCTTCCCCAAGACAAAACACTAAT...GATCACTTGGCGGTGACTTTGTAGAGATTGAAGTGGAGGAGTTAAGACACATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025393.14 |
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| 3UTR TCA 72 bp | ACTGTGAGAACTTCTCAGCCTTACAATCAGCAGCTCTaGCTCTCCTCGGCATGCAAGGCGCTCGCACACACT | + |
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Preference number: 3 (lower is better) Translates to: TVRTSQPYNQQL*LSSACKALAHT Trigger: AGTGTGTGCGAGCGCCTTGCATGCCGAGGAGAGTCAGAGCTGCTGATTGTAAGGCTGAGAAGTTCTCACAGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025393.14 |
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| 3UTR TCA 72 bp | ACCAGCAGGGAAGACTCAGCAAGAACTGCATCTTTCTaGTCTTCAAGCACTGAGCCACACCTGAAAGTTCTA | + |
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Preference number: 3 (lower is better) Translates to: TSREDSARTASF*SSSTEPHLKVL Trigger: TAGAACTTTCAGGTGTGGCTCAGTGCTTGAAGATCAGAAAGATGCAGTTCTTGCTGAGTCTTCCCTGCTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
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| 3UTR CCA 72 bp | ACAGTGCGTTTAATAACTCGCCCACTAAGGGGCAGGTaGCTTAACTGTGAGAACTTCTCAGCCTTACAATCA | + |
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Preference number: 3 (lower is better) Translates to: TVRLITRPLRGR*LNCENFSALQS Trigger: TGATTGTAAGGCTGAGAAGTTCTCACAGTTAAGCCACCTGCCCCTTAGTGGGCGAGTTATTAAACGCACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025393.14 |
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| 3UTR TCA 72 bp | CTCCTCCACTTCAATCTCTACAAAGTCACCGCCAAGTaGTCAAGGATGGCAAACACAGGGCTTATAACCAAA | + |
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Preference number: 3 (lower is better) Translates to: LLHFNLYKVTAK*SRMANTGLITK Trigger: TTTGGTTATAAGCCCTGTGTTTGCCATCCTTGATCACTTGGCGGTGACTTTGTAGAGATTGAAGTGGAGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025393.14 |
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| 3UTR TCA 72 bp | CTCAGCAAGAACTGCATCTTTCTGATCTTCAAGCACTaGGCCACACCTGAAAGTTCTAAAATAGAAAAGAAG | + |
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Preference number: 3 (lower is better) Translates to: LSKNCIFLIFKH*ATPESSKIEKK Trigger: CTTCTTTTCTATTTTAGAACTTTCAGGTGTGGCTCAGTGCTTGAAGATCAGAAAGATGCAGTTCTTGCTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
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| CDS-3UTR TCA 90 bp | CGCCCAGCACTGGCCGACTCCTCCATACAGAACCAGCAGGGAAGACTCAGCAAGATAGGCGGGTGGTGCTaGAGATGGCCGTTTTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: RPALADSSIQNQQGRLSKIGGWC*RWPFWW Trigger: CCACCAAAACGGCCATCTTCAGCACCACCCGCCTAT...CTTGCTGAGTCTTCCCTGCTGGTTCTGTATGGAGGAGTCGGCCAGTGCTGGGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025393.14 |
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| CDS-3UTR TCA 90 bp | CTGTCTGCTAAGAGCAAGGCAGCAAACACATCTCTCAACCCTTTAGGAAAAGACGCCACGGCCGCCGCCTaGGCAGCAGCTGCAGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: LSAKSKAANTSLNPLGKDATAAA*AAAAAC Trigger: GCAAGCTGCAGCTGCTGCTCAGGCGGCGGCCGTGGC...GTCTTTTCCTAAAGGGTTGAGAGATGTGTTTGCTGCCTTGCTCTTAGCAGACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
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| CDS-3UTR GCA 90 bp | CGACTCCTCCATACAGAACCAGCAGGGAAGACTCAGCAAGAACTGCATCTTTCTGCAGCAGCTGCAGCTTaGGCAGTGGCCGCCTGTTGC | + |
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Preference number: 4 (lower is better) Translates to: RLLHTEPAGKTQQELHLSAAAAA*AVAACC Trigger: GCAACAGGCGGCCACTGCGCAAGCTGCAGCTGCTGC...AGAAAGATGCAGTTCTTGCTGAGTCTTCCCTGCTGGTTCTGTATGGAGGAGTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025393.14 |
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| CDS-3UTR TCA 90 bp | TTTCTGTCTGCTAAGAGCAAGGCAGCAAACACATCTCTCAACCCTTTAGGAAAAGCCACGGCCGCCGCCTaGGCAGCAGCTGCAGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: FLSAKSKAANTSLNPLGKATAAA*AAAAAC Trigger: GCAAGCTGCAGCTGCTGCTCAGGCGGCGGCCGTGGC...TTTTCCTAAAGGGTTGAGAGATGTGTTTGCTGCCTTGCTCTTAGCAGACAGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
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| CDS-3UTR GCA 90 bp | CTGTCTGCTAAGAGCAAGGCAGCAAACACATCTCTCAACCCTTTAGGAAAAGACGCAGCAGCTGCAGCTTaGGCAGTGGCCGCCTGTTGC | + |
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Preference number: 4 (lower is better) Translates to: LSAKSKAANTSLNPLGKDAAAAA*AVAACC Trigger: GCAACAGGCGGCCACTGCGCAAGCTGCAGCTGCTGC...GTCTTTTCCTAAAGGGTTGAGAGATGTGTTTGCTGCCTTGCTCTTAGCAGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
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| CDS-3UTR CCA 90 bp | GAACCAGCAGGGAAGACTCAGCAAGAACTGCATCTTTCTGATCTTCAAGCACTGCTGCCTGGGGTAGTCTaGGCCCCAGCCCTTCACAAA | + |
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Preference number: 4 (lower is better) Translates to: EPAGKTQQELHLSDLQALLPGVV*APALHK Trigger: TTTGTGAAGGGCTGGGGCCCAGACTACCCCAGGCAG...CAGTGCTTGAAGATCAGAAAGATGCAGTTCTTGCTGAGTCTTCCCTGCTGGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
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| CDS-3UTR GCA 90 bp | CAGTTTCTGTCTGCTAAGAGCAAGGCAGCAAACACATCTCTCAACCCTTTAGGAAACAGCGTCGCCAGGTaGTCGGCCAGCTTCTCTGTC | + |
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Preference number: 4 (lower is better) Translates to: QFLSAKSKAANTSLNPLGNSVAR*SASFSV Trigger: GACAGAGAAGCTGGCCGAGCACCTGGCGACGCTGTT...TCCTAAAGGGTTGAGAGATGTGTTTGCTGCCTTGCTCTTAGCAGACAGAAACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
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| CDS-3UTR GCA 90 bp | CTGTCTGCTAAGAGCAAGGCAGCAAACACATCTCTCAACCCTTTAGGAAAAGACAACAGCGTCGCCAGGTaGTCGGCCAGCTTCTCTGTC | + |
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Preference number: 4 (lower is better) Translates to: LSAKSKAANTSLNPLGKDNSVAR*SASFSV Trigger: GACAGAGAAGCTGGCCGAGCACCTGGCGACGCTGTT...GTCTTTTCCTAAAGGGTTGAGAGATGTGTTTGCTGCCTTGCTCTTAGCAGACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
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| CDS-3UTR CCA 90 bp | ACTGCCACCTTGCAGAACAGTGAAGCAGCAGGCAGAGTGACACTGCTTTTAGTGTGTACAAAGACCGCGTaGTCACTAAGGCACCTGACC | + |
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Preference number: 4 (lower is better) Translates to: TATLQNSEAAGRVTLLLVCTKTA*SLRHLT Trigger: GGTCAGGTGCCTTAGTGACCACGCGGTCTTTGTACA...CACTAAAAGCAGTGTCACTCTGCCTGCTGCTTCACTGTTCTGCAAGGTGGCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025393.14 |
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| CDS-3UTR CCA 90 bp | CGCCCAGCACTGGCCGACTCCTCCATACAGAACCAGCAGGGAAGACTCAGCAAGCTTTATATACGCGCTTaGGTAGATCTTATGAACAGC | + |
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Preference number: 4 (lower is better) Translates to: RPALADSSIQNQQGRLSKLYIRA*VDLMNS Trigger: GCTGTTCATAAGATCTACCCAAGCGCGTATATAAAG...CTTGCTGAGTCTTCCCTGCTGGTTCTGTATGGAGGAGTCGGCCAGTGCTGGGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025393.14 |
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| CDS-3UTR TCA 90 bp | CAGTTTCTGTCTGCTAAGAGCAAGGCAGCAAACACATCTCTCAACCCTTTAGGATCCTGGCTGAGGCCCTaGAGCTATCTGCAACAGTCC | + |
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Preference number: 4 (lower is better) Translates to: QFLSAKSKAANTSLNPLGSWLRP*SYLQQS Trigger: GGACTGTTGCAGATAGCTTCAGGGCCTCAGCCAGGA...TCCTAAAGGGTTGAGAGATGTGTTTGCTGCCTTGCTCTTAGCAGACAGAAACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
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| CDS-3UTR TCA 90 bp | CTGTCTGCTAAGAGCAAGGCAGCAAACACATCTCTCAACCCTTTAGGAAAAGACTCCTGGCTGAGGCCCTaGAGCTATCTGCAACAGTCC | + |
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Preference number: 4 (lower is better) Translates to: LSAKSKAANTSLNPLGKDSWLRP*SYLQQS Trigger: GGACTGTTGCAGATAGCTTCAGGGCCTCAGCCAGGA...GTCTTTTCCTAAAGGGTTGAGAGATGTGTTTGCTGCCTTGCTCTTAGCAGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
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| CDS-3UTR TCA 90 bp | CAGTTTCTGTCTGCTAAGAGCAAGGCAGCAAACACATCTCTCAACCCTTTAGGAATAGGCGGGTGGTGCTaGAGATGGCCGTTTTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: QFLSAKSKAANTSLNPLGIGGWC*RWPFWW Trigger: CCACCAAAACGGCCATCTTCAGCACCACCCGCCTAT...TCCTAAAGGGTTGAGAGATGTGTTTGCTGCCTTGCTCTTAGCAGACAGAAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
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| CDS-3UTR GCA 90 bp | CTGTCTGCTAAGAGCAAGGCAGCAAACACATCTCTCAACCCTTTAGGAAAAGACGTCCTTCACTATGGCTaGCCGCCAGAATACTGGCCG | + |
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Preference number: 4 (lower is better) Translates to: LSAKSKAANTSLNPLGKDVLHYG*PPEYWP Trigger: CGGCCAGTATTCTGGCGGGCAGCCATAGTGAAGGAC...GTCTTTTCCTAAAGGGTTGAGAGATGTGTTTGCTGCCTTGCTCTTAGCAGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
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| CDS-3UTR GCA 90 bp | CAGTTTCTGTCTGCTAAGAGCAAGGCAGCAAACACATCTCTCAACCCTTTAGGAGGTCATCCACACCGATaGCAGCAGCAGCAGACAGAC | + |
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Preference number: 4 (lower is better) Translates to: QFLSAKSKAANTSLNPLGGHPHR*QQQQTD Trigger: GTCTGTCTGCTGCTGCTGGCATCGGTGTGGATGACC...TCCTAAAGGGTTGAGAGATGTGTTTGCTGCCTTGCTCTTAGCAGACAGAAACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
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| CDS-3UTR TCA 90 bp | CTGTCTGCTAAGAGCAAGGCAGCAAACACATCTCTCAACCCTTTAGGAAAAGACAGAATACTGGCCGGCTaGCTTGTGGAAGCCACAGGA | + |
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Preference number: 4 (lower is better) Translates to: LSAKSKAANTSLNPLGKDRILAG*LVEATG Trigger: TCCTGTGGCTTCCACAAGTCAGCCGGCCAGTATTCT...GTCTTTTCCTAAAGGGTTGAGAGATGTGTTTGCTGCCTTGCTCTTAGCAGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
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| CDS-3UTR GCA 90 bp | GAACCAGCAGGGAAGACTCAGCAAGAACTGCATCTTTCTGATCTTCAAGCACTGCCAACTGCACTCCTTTaGCTATGTGCAACCTCGCTC | + |
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Preference number: 4 (lower is better) Translates to: EPAGKTQQELHLSDLQALPTALL*LCATSL Trigger: GAGCGAGGTTGCACATAGGCAAAGGAGTGCAGTTGG...CAGTGCTTGAAGATCAGAAAGATGCAGTTCTTGCTGAGTCTTCCCTGCTGGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
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| CDS-3UTR CCA 90 bp | CAGTTTCTGTCTGCTAAGAGCAAGGCAGCAAACACATCTCTCAACCCTTTAGGATGGCCGGCTGACTTGTaGAAGCCACAGGAATGTTGG | + |
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Preference number: 4 (lower is better) Translates to: QFLSAKSKAANTSLNPLGWPADL*KPQECW Trigger: CCAACATTCCTGTGGCTTCCACAAGTCAGCCGGCCA...TCCTAAAGGGTTGAGAGATGTGTTTGCTGCCTTGCTCTTAGCAGACAGAAACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
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| CDS-3UTR CCA 90 bp | TTTCTGTCTGCTAAGAGCAAGGCAGCAAACACATCTCTCAACCCTTTAGGAAAACTGCCTGGGGTAGTCTaGGCCCCAGCCCTTCACAAA | + |
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Preference number: 4 (lower is better) Translates to: FLSAKSKAANTSLNPLGKLPGVV*APALHK Trigger: TTTGTGAAGGGCTGGGGCCCAGACTACCCCAGGCAG...TTTTCCTAAAGGGTTGAGAGATGTGTTTGCTGCCTTGCTCTTAGCAGACAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
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| CDS-3UTR CCA 90 bp | CAGTTTCTGTCTGCTAAGAGCAAGGCAGCAAACACATCTCTCAACCCTTTAGGAGGTCCGCAATGGGCATaGTGTGCAGGACTTCATCCA | + |
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Preference number: 4 (lower is better) Translates to: QFLSAKSKAANTSLNPLGGPQWA*CAGLHP Trigger: TGGATGAAGTCCTGCACACCATGCCCATTGCGGACC...TCCTAAAGGGTTGAGAGATGTGTTTGCTGCCTTGCTCTTAGCAGACAGAAACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
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| CDS-3UTR TCA 90 bp | GTACAGTCAATGTGTCTTAACTCCTCCACTTCAATCTCTACAAAGTCACCGCCAAGAATACTGGCCGGCTaGCTTGTGGAAGCCACAGGA | + |
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Preference number: 4 (lower is better) Translates to: VQSMCLNSSTSISTKSPPRILAG*LVEATG Trigger: TCCTGTGGCTTCCACAAGTCAGCCGGCCAGTATTCT...TGGCGGTGACTTTGTAGAGATTGAAGTGGAGGAGTTAAGACACATTGACTGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025393.14 |
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| CDS-3UTR TCA 90 bp | CAGTTTCTGTCTGCTAAGAGCAAGGCAGCAAACACATCTCTCAACCCTTTAGGATACTCAGGAGCAGGATaGTTGGAAATGGGAGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: QFLSAKSKAANTSLNPLGYSGAG*LEMGGW Trigger: CCAGCCTCCCATTTCCAATCATCCTGCTCCTGAGTA...TCCTAAAGGGTTGAGAGATGTGTTTGCTGCCTTGCTCTTAGCAGACAGAAACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
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| CDS-3UTR GCA 90 bp | TTTCTGTCTGCTAAGAGCAAGGCAGCAAACACATCTCTCAACCCTTTAGGAAAAGTCCTTCACTATGGCTaGCCGCCAGAATACTGGCCG | + |
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Preference number: 4 (lower is better) Translates to: FLSAKSKAANTSLNPLGKVLHYG*PPEYWP Trigger: CGGCCAGTATTCTGGCGGGCAGCCATAGTGAAGGAC...TTTTCCTAAAGGGTTGAGAGATGTGTTTGCTGCCTTGCTCTTAGCAGACAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
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| CDS-3UTR CCA 90 bp | GAACCAGCAGGGAAGACTCAGCAAGAACTGCATCTTTCTGATCTTCAAGCACTGTCGAATGTCCTTCAGTaGGTAAGGACGGCTGTCCTT | + |
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Preference number: 4 (lower is better) Translates to: EPAGKTQQELHLSDLQALSNVLQ*VRTAVL Trigger: AAGGACAGCCGTCCTTACCCACTGAAGGACATTCGA...CAGTGCTTGAAGATCAGAAAGATGCAGTTCTTGCTGAGTCTTCCCTGCTGGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
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| CDS-3UTR CCA 90 bp | GAACCAGCAGGGAAGACTCAGCAAGAACTGCATCTTTCTGATCTTCAAGCACTGAACAGTCCTTCACTATaGCTGCCCGCCAGAATACTG | + |
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Preference number: 4 (lower is better) Translates to: EPAGKTQQELHLSDLQALNSPSL*LPARIL Trigger: CAGTATTCTGGCGGGCAGCCATAGTGAAGGACTGTT...CAGTGCTTGAAGATCAGAAAGATGCAGTTCTTGCTGAGTCTTCCCTGCTGGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
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| CDS-3UTR CCA 90 bp | CAGTTTCTGTCTGCTAAGAGCAAGGCAGCAAACACATCTCTCAACCCTTTAGGAAGACAGACTGATGGCTaGAGCTATTCCACCCACGGA | + |
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Preference number: 4 (lower is better) Translates to: QFLSAKSKAANTSLNPLGRQTDG*SYSTHG Trigger: TCCGTGGGTGGAATAGCTCCAGCCATCAGTCTGTCT...TCCTAAAGGGTTGAGAGATGTGTTTGCTGCCTTGCTCTTAGCAGACAGAAACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
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| CDS-3UTR TCA 90 bp | GAACCAGCAGGGAAGACTCAGCAAGAACTGCATCTTTCTGATCTTCAAGCACTGGGGTGTTGGATGGTTTaGATCGAATGTCCTTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: EPAGKTQQELHLSDLQALGCWMV*IECPSV Trigger: CACTGAAGGACATTCGATTCAAACCATCCAACACCC...CAGTGCTTGAAGATCAGAAAGATGCAGTTCTTGCTGAGTCTTCCCTGCTGGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
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| CDS-3UTR TCA 90 bp | GAACCAGCAGGGAAGACTCAGCAAGAACTGCATCTTTCTGATCTTCAAGCACTGTGGCCGTTTTGGTGGTaGGGCAAATTAGGTGTGTAT | + |
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Preference number: 4 (lower is better) Translates to: EPAGKTQQELHLSDLQALWPFWW*GKLGVY Trigger: ATACACACCTAATTTGCCTCACCACCAAAACGGCCA...CAGTGCTTGAAGATCAGAAAGATGCAGTTCTTGCTGAGTCTTCCCTGCTGGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
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| CDS-3UTR GCA 90 bp | CGACTCCTCCATACAGAACCAGCAGGGAAGACTCAGCAAGAACTGCATCTTTCTATTAGGTGTGTATGGTaGAGTCCTACTTCCAGTCCA | + |
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Preference number: 4 (lower is better) Translates to: RLLHTEPAGKTQQELHLSIRCVW*SPTSSP Trigger: TGGACTGGAAGTAGGACTGCACCATACACACCTAAT...AGAAAGATGCAGTTCTTGCTGAGTCTTCCCTGCTGGTTCTGTATGGAGGAGTCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025393.14 |
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| CDS-3UTR CCA 90 bp | CAGTTTCTGTCTGCTAAGAGCAAGGCAGCAAACACATCTCTCAACCCTTTAGGATCGAATGTCCTTCAGTaGGTAAGGACGGCTGTCCTT | + |
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Preference number: 4 (lower is better) Translates to: QFLSAKSKAANTSLNPLGSNVLQ*VRTAVL Trigger: AAGGACAGCCGTCCTTACCCACTGAAGGACATTCGA...TCCTAAAGGGTTGAGAGATGTGTTTGCTGCCTTGCTCTTAGCAGACAGAAACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
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| CDS-3UTR CCA 90 bp | TTTCTGTCTGCTAAGAGCAAGGCAGCAAACACATCTCTCAACCCTTTAGGAAAATGGCCGGCTGACTTGTaGAAGCCACAGGAATGTTGG | + |
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Preference number: 4 (lower is better) Translates to: FLSAKSKAANTSLNPLGKWPADL*KPQECW Trigger: CCAACATTCCTGTGGCTTCCACAAGTCAGCCGGCCA...TTTTCCTAAAGGGTTGAGAGATGTGTTTGCTGCCTTGCTCTTAGCAGACAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
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| CDS-3UTR CCA 90 bp | CAGTTTCTGTCTGCTAAGAGCAAGGCAGCAAACACATCTCTCAACCCTTTAGGAAACAGTCCTTCACTATaGCTGCCCGCCAGAATACTG | + |
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Preference number: 4 (lower is better) Translates to: QFLSAKSKAANTSLNPLGNSPSL*LPARIL Trigger: CAGTATTCTGGCGGGCAGCCATAGTGAAGGACTGTT...TCCTAAAGGGTTGAGAGATGTGTTTGCTGCCTTGCTCTTAGCAGACAGAAACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
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| CDS-3UTR CCA 90 bp | CGACTCCTCCATACAGAACCAGCAGGGAAGACTCAGCAAGAACTGCATCTTTCTAAGCTCATTGTGAACTaGCCAGTAATGTCCAGGATG | + |
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Preference number: 4 (lower is better) Translates to: RLLHTEPAGKTQQELHLSKLIVN*PVMSRM Trigger: CATCCTGGACATTACTGGCCAGTTCACAATGAGCTT...AGAAAGATGCAGTTCTTGCTGAGTCTTCCCTGCTGGTTCTGTATGGAGGAGTCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025393.14 |
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| CDS-3UTR CCA 90 bp | GTACAGTCAATGTGTCTTAACTCCTCCACTTCAATCTCTACAAAGTCACCGCCAAGACAGACTGATGGCTaGAGCTATTCCACCCACGGA | + |
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Preference number: 4 (lower is better) Translates to: VQSMCLNSSTSISTKSPPRQTDG*SYSTHG Trigger: TCCGTGGGTGGAATAGCTCCAGCCATCAGTCTGTCT...TGGCGGTGACTTTGTAGAGATTGAAGTGGAGGAGTTAAGACACATTGACTGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025393.14 |
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| CDS-3UTR CCA 90 bp | TACAGTCAATGTGTCTTAACTCCTCCACTTCAATCTCTACAAAGTCACCGCCAAGGTCCGCAATGGGCATaGTGTGCAGGACTTCATCCA | + |
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Preference number: 4 (lower is better) Translates to: YSQCVLTPPLQSLQSHRQGPQWA*CAGLHP Trigger: TGGATGAAGTCCTGCACACCATGCCCATTGCGGACC...TTGGCGGTGACTTTGTAGAGATTGAAGTGGAGGAGTTAAGACACATTGACTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025393.14 |
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| CDS-3UTR TCA 90 bp | CAGTTTCTGTCTGCTAAGAGCAAGGCAGCAAACACATCTCTCAACCCTTTAGGAGGGTGTTGGATGGTTTaGATCGAATGTCCTTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: QFLSAKSKAANTSLNPLGGCWMV*IECPSV Trigger: CACTGAAGGACATTCGATTCAAACCATCCAACACCC...TCCTAAAGGGTTGAGAGATGTGTTTGCTGCCTTGCTCTTAGCAGACAGAAACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS-3UTR TCA 90 bp | TTTCTGTCTGCTAAGAGCAAGGCAGCAAACACATCTCTCAACCCTTTAGGAAAATACTCAGGAGCAGGATaGTTGGAAATGGGAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FLSAKSKAANTSLNPLGKYSGAG*LEMGGW Trigger: CCAGCCTCCCATTTCCAATCATCCTGCTCCTGAGTA...TTTTCCTAAAGGGTTGAGAGATGTGTTTGCTGCCTTGCTCTTAGCAGACAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS-3UTR TCA 90 bp | TACAGTCAATGTGTCTTAACTCCTCCACTTCAATCTCTACAAAGTCACCGCCAACACAACAGGGCAGCTTaGAGGGACCTTAAACGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: YSQCVLTPPLQSLQSHRQHNRAA*RDLKRL Trigger: GAGACGTTTAAGGTCCCTTCAAGCTGCCCTGTTGTG...TTGGCGGTGACTTTGTAGAGATTGAAGTGGAGGAGTTAAGACACATTGACTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025393.14 |
||
| CDS-3UTR TCA 90 bp | CTGTCTGCTAAGAGCAAGGCAGCAAACACATCTCTCAACCCTTTAGGAAAAGACTGGACATTGGAGAGTTaGCCCAAGCAAAAGCGATCT | + |
|
Preference number: 4 (lower is better) Translates to: LSAKSKAANTSLNPLGKDWTLES*PKQKRS Trigger: AGATCGCTTTTGCTTGGGTCAACTCTCCAATGTCCA...GTCTTTTCCTAAAGGGTTGAGAGATGTGTTTGCTGCCTTGCTCTTAGCAGACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS-3UTR GCA 90 bp | TTTCTGTCTGCTAAGAGCAAGGCAGCAAACACATCTCTCAACCCTTTAGGAAAACCAACTGCACTCCTTTaGCTATGTGCAACCTCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FLSAKSKAANTSLNPLGKPTALL*LCATSL Trigger: GAGCGAGGTTGCACATAGGCAAAGGAGTGCAGTTGG...TTTTCCTAAAGGGTTGAGAGATGTGTTTGCTGCCTTGCTCTTAGCAGACAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS-3UTR CCA 90 bp | CTGTCTGCTAAGAGCAAGGCAGCAAACACATCTCTCAACCCTTTAGGAAAAGACCTGTCCTGTGGACATTaGAGAGTTGACCCAAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LSAKSKAANTSLNPLGKDLSCGH*RVDPSK Trigger: TTTGCTTGGGTCAACTCTCCAATGTCCACAGGACAG...GTCTTTTCCTAAAGGGTTGAGAGATGTGTTTGCTGCCTTGCTCTTAGCAGACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS-3UTR GCA 90 bp | TTTCTGTCTGCTAAGAGCAAGGCAGCAAACACATCTCTCAACCCTTTAGGAAAAGGCCCTGAAGCTATCTaGAACAGTCCTTCACTATGG | + |
|
Preference number: 4 (lower is better) Translates to: FLSAKSKAANTSLNPLGKGPEAI*NSPSLW Trigger: CCATAGTGAAGGACTGTTGCAGATAGCTTCAGGGCC...TTTTCCTAAAGGGTTGAGAGATGTGTTTGCTGCCTTGCTCTTAGCAGACAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS-3UTR CCA 90 bp | CTGTCTGCTAAGAGCAAGGCAGCAAACACATCTCTCAACCCTTTAGGAAAAGACCCGCTCATAGTGATATaGATTCACACAGACACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LSAKSKAANTSLNPLGKDPLIVI*IHTDTV Trigger: GACAGTGTCTGTGTGAATCCATATCACTATGAGCGG...GTCTTTTCCTAAAGGGTTGAGAGATGTGTTTGCTGCCTTGCTCTTAGCAGACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS-3UTR TCA 90 bp | GAACCAGCAGGGAAGACTCAGCAAGAACTGCATCTTTCTGATCTTCAAGCACTGACACACTTGCTAGGATaGGCTCCATTTGTAGTTATA | + |
|
Preference number: 4 (lower is better) Translates to: EPAGKTQQELHLSDLQALTHLLG*APFVVI Trigger: TATAACTACAAATGGAGCTCATCCTAGCAAGTGTGT...CAGTGCTTGAAGATCAGAAAGATGCAGTTCTTGCTGAGTCTTCCCTGCTGGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS-3UTR TCA 90 bp | GTACAGTCAATGTGTCTTAACTCCTCCACTTCAATCTCTACAAAGTCACCGCCATGTCCTTCAAAGTCGTaGACGTACTCATCCTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: VQSMCLNSSTSISTKSPPCPSKS*TYSSFT Trigger: AGTGAAGGATGAGTACGTTCACGACTTTGAAGGACA...TGGCGGTGACTTTGTAGAGATTGAAGTGGAGGAGTTAAGACACATTGACTGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025393.14 |
||
| CDS-3UTR GCA 90 bp | AGTCAATGTGTCTTAACTCCTCCACTTCAATCTCTACAAAGTCACCGCCAAGTGCCTTTACATTCCAACTaGACTCCTTTGCCTATGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SQCVLTPPLQSLQSHRQVPLHSN*TPLPMC Trigger: GCACATAGGCAAAGGAGTGCAGTTGGAATGTAAAGG...CACTTGGCGGTGACTTTGTAGAGATTGAAGTGGAGGAGTTAAGACACATTGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025393.14 |
||
| CDS-3UTR GCA 90 bp | CTTCAGATTATAAACACGAGTATATTTCATAGTCCACCATCCTGGAAATGGTTAGGTCATCCACACCGATaGCAGCAGCAGCAGACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LQIINTSIFHSPPSWKWLGHPHR*QQQQTD Trigger: GTCTGTCTGCTGCTGCTGGCATCGGTGTGGATGACC...TAACCATTTCCAGGATGGTGGACTATGAAATATACTCGTGTTTATAATCTGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS-3UTR CCA 90 bp | CAGTTTCTGTCTGCTAAGAGCAAGGCAGCAAACACATCTCTCAACCCTTTAGGACAAATTAGGTGTGTATaGTGCAGTCCTACTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QFLSAKSKAANTSLNPLGQIRCV*CSPTSS Trigger: ACTGGAAGTAGGACTGCACCATACACACCTAATTTG...TCCTAAAGGGTTGAGAGATGTGTTTGCTGCCTTGCTCTTAGCAGACAGAAACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS-3UTR CCA 90 bp | CAGTTTCTGTCTGCTAAGAGCAAGGCAGCAAACACATCTCTCAACCCTTTAGGATTTCAAAGTAAGCAATaGAGCACCAGTACTCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QFLSAKSKAANTSLNPLGFQSKQ*STSTQE Trigger: CTCCTGAGTACTGGTGCTCCATTGCTTACTTTGAAA...TCCTAAAGGGTTGAGAGATGTGTTTGCTGCCTTGCTCTTAGCAGACAGAAACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS-3UTR CCA 90 bp | TTTCTGTCTGCTAAGAGCAAGGCAGCAAACACATCTCTCAACCCTTTAGGAAAACTGTCCTGTGGACATTaGAGAGTTGACCCAAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: FLSAKSKAANTSLNPLGKLSCGH*RVDPSK Trigger: TTTGCTTGGGTCAACTCTCCAATGTCCACAGGACAG...TTTTCCTAAAGGGTTGAGAGATGTGTTTGCTGCCTTGCTCTTAGCAGACAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS-3UTR TCA 90 bp | TTTCTGTCTGCTAAGAGCAAGGCAGCAAACACATCTCTCAACCCTTTAGGAAAATGTCCTTCAAAGTCGTaGACGTACTCATCCTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: FLSAKSKAANTSLNPLGKCPSKS*TYSSFT Trigger: AGTGAAGGATGAGTACGTTCACGACTTTGAAGGACA...TTTTCCTAAAGGGTTGAGAGATGTGTTTGCTGCCTTGCTCTTAGCAGACAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS-3UTR CCA 90 bp | TACAGTCAATGTGTCTTAACTCCTCCACTTCAATCTCTACAAAGTCACCGCCAACCGCTCATAGTGATATaGATTCACACAGACACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: YSQCVLTPPLQSLQSHRQPLIVI*IHTDTV Trigger: GACAGTGTCTGTGTGAATCCATATCACTATGAGCGG...TTGGCGGTGACTTTGTAGAGATTGAAGTGGAGGAGTTAAGACACATTGACTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025393.14 |
||
| CDS-3UTR CCA 90 bp | CAGTTTCTGTCTGCTAAGAGCAAGGCAGCAAACACATCTCTCAACCCTTTAGGAATGATGGTAAGTAGCTaGCTGAGCAGTAAATCCATT | + |
|
Preference number: 4 (lower is better) Translates to: QFLSAKSKAANTSLNPLGMMVSS*LSSKSI Trigger: AATGGATTTACTGCTCAGCCAGCTACTTACCATCAT...TCCTAAAGGGTTGAGAGATGTGTTTGCTGCCTTGCTCTTAGCAGACAGAAACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS-3UTR TCA 90 bp | CTTCAGATTATAAACACGAGTATATTTCATAGTCCACCATCCTGGAAATGGTTACACAACAGGGCAGCTTaGAGGGACCTTAAACGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LQIINTSIFHSPPSWKWLHNRAA*RDLKRL Trigger: GAGACGTTTAAGGTCCCTTCAAGCTGCCCTGTTGTG...TAACCATTTCCAGGATGGTGGACTATGAAATATACTCGTGTTTATAATCTGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS-3UTR GCA 90 bp | GTACAGTCAATGTGTCTTAACTCCTCCACTTCAATCTCTACAAAGTCACCGCCATCAAACTATGTACAATaGTCAGACAGGCATCGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: VQSMCLNSSTSISTKSPPSNYVQ*SDRHRY Trigger: GTAACGATGCCTGTCTGAGCATTGTACATAGTTTGA...TGGCGGTGACTTTGTAGAGATTGAAGTGGAGGAGTTAAGACACATTGACTGTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025393.14 |
||
| CDS-3UTR GCA 90 bp | GAACCAGCAGGGAAGACTCAGCAAGAACTGCATCTTTCTGATCTTCAAGCACTGTACCAAACTCTCAATTaGTCTTTTTGCAAAGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: EPAGKTQQELHLSDLQALYQTLN*SFCKGF Trigger: GAAACCTTTGCAAAAAGAGCAATTGAGAGTTTGGTA...CAGTGCTTGAAGATCAGAAAGATGCAGTTCTTGCTGAGTCTTCCCTGCTGGTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS-3UTR GCA 90 bp | TACAGTCAATGTGTCTTAACTCCTCCACTTCAATCTCTACAAAGTCACCGCCAACTTGGAGCATTACTCTaGAGTGTTAATCCTGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: YSQCVLTPPLQSLQSHRQLGALL*SVNPER Trigger: TCTCTCAGGATTAACACTGCAGAGTAATGCTCCAAG...TTGGCGGTGACTTTGTAGAGATTGAAGTGGAGGAGTTAAGACACATTGACTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025393.14 |
||
| CDS-3UTR CCA 90 bp | GTACAGTCAATGTGTCTTAACTCCTCCACTTCAATCTCTACAAAGTCACCGCCAATGATGGTAAGTAGCTaGCTGAGCAGTAAATCCATT | + |
|
Preference number: 4 (lower is better) Translates to: VQSMCLNSSTSISTKSPPMMVSS*LSSKSI Trigger: AATGGATTTACTGCTCAGCCAGCTACTTACCATCAT...TGGCGGTGACTTTGTAGAGATTGAAGTGGAGGAGTTAAGACACATTGACTGTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025393.14 |
||
| CDS-3UTR CCA 90 bp | CTTCAGATTATAAACACGAGTATATTTCATAGTCCACCATCCTGGAAATGGTTATGTACAAAGACCGCGTaGTCACTAAGGCACCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: LQIINTSIFHSPPSWKWLCTKTA*SLRHLT Trigger: GGTCAGGTGCCTTAGTGACCACGCGGTCTTTGTACA...TAACCATTTCCAGGATGGTGGACTATGAAATATACTCGTGTTTATAATCTGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS-3UTR TCA 90 bp | TACAGTCAATGTGTCTTAACTCCTCCACTTCAATCTCTACAAAGTCACCGCCAAACACACTTGCTAGGATaGGCTCCATTTGTAGTTATA | + |
|
Preference number: 4 (lower is better) Translates to: YSQCVLTPPLQSLQSHRQTHLLG*APFVVI Trigger: TATAACTACAAATGGAGCTCATCCTAGCAAGTGTGT...TTGGCGGTGACTTTGTAGAGATTGAAGTGGAGGAGTTAAGACACATTGACTGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025393.14 |
||
| CDS-3UTR GCA 90 bp | TTTCTGTCTGCTAAGAGCAAGGCAGCAAACACATCTCTCAACCCTTTAGGAAAATCAAACTATGTACAATaGTCAGACAGGCATCGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: FLSAKSKAANTSLNPLGKSNYVQ*SDRHRY Trigger: GTAACGATGCCTGTCTGAGCATTGTACATAGTTTGA...TTTTCCTAAAGGGTTGAGAGATGTGTTTGCTGCCTTGCTCTTAGCAGACAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS-3UTR GCA 90 bp | CTTCAGATTATAAACACGAGTATATTTCATAGTCCACCATCCTGGAAATGGTTAGGCCCTGAAGCTATCTaGAACAGTCCTTCACTATGG | + |
|
Preference number: 4 (lower is better) Translates to: LQIINTSIFHSPPSWKWLGPEAI*NSPSLW Trigger: CCATAGTGAAGGACTGTTGCAGATAGCTTCAGGGCC...TAACCATTTCCAGGATGGTGGACTATGAAATATACTCGTGTTTATAATCTGAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS-3UTR CCA 90 bp | TTTCTGTCTGCTAAGAGCAAGGCAGCAAACACATCTCTCAACCCTTTAGGAAAACTTTATATACGCGCTTaGGTAGATCTTATGAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: FLSAKSKAANTSLNPLGKLYIRA*VDLMNS Trigger: GCTGTTCATAAGATCTACCCAAGCGCGTATATAAAG...TTTTCCTAAAGGGTTGAGAGATGTGTTTGCTGCCTTGCTCTTAGCAGACAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS-3UTR TCA 90 bp | CTTCAGATTATAAACACGAGTATATTTCATAGTCCACCATCCTGGAAATGGTTATGGCCGTTTTGGTGGTaGGGCAAATTAGGTGTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: LQIINTSIFHSPPSWKWLWPFWW*GKLGVY Trigger: ATACACACCTAATTTGCCTCACCACCAAAACGGCCA...TAACCATTTCCAGGATGGTGGACTATGAAATATACTCGTGTTTATAATCTGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS-3UTR TCA 90 bp | CTTCAGATTATAAACACGAGTATATTTCATAGTCCACCATCCTGGAAATGGTTATGGACATTGGAGAGTTaGCCCAAGCAAAAGCGATCT | + |
|
Preference number: 4 (lower is better) Translates to: LQIINTSIFHSPPSWKWLWTLES*PKQKRS Trigger: AGATCGCTTTTGCTTGGGTCAACTCTCCAATGTCCA...TAACCATTTCCAGGATGGTGGACTATGAAATATACTCGTGTTTATAATCTGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| 3UTR CAA 72 bp | TGTAAGGAATTGTCAATATGCACACAGATTAGTGTTTaGTCTTGGGGAAGAAACCCTGAAGTCTGCAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: CKELSICTQISV*SWGRNPEVCKT Trigger: TGTCTTGCAGACTTCAGGGTTTCTTCCCCAAGACAAAACACTAATCTGTGTGCATATTGACAATTCCTTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025393.14 |
||
| CDS-3UTR GCA 90 bp | TTTCTGTCTGCTAAGAGCAAGGCAGCAAACACATCTCTCAACCCTTTAGGAAAATACCAAACTCTCAATTaGTCTTTTTGCAAAGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FLSAKSKAANTSLNPLGKYQTLN*SFCKGF Trigger: GAAACCTTTGCAAAAAGAGCAATTGAGAGTTTGGTA...TTTTCCTAAAGGGTTGAGAGATGTGTTTGCTGCCTTGCTCTTAGCAGACAGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS-3UTR GCA 90 bp | CTTCAGATTATAAACACGAGTATATTTCATAGTCCACCATCCTGGAAATGGTTAATTAGGTGTGTATGGTaGAGTCCTACTTCCAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LQIINTSIFHSPPSWKWLIRCVW*SPTSSP Trigger: TGGACTGGAAGTAGGACTGCACCATACACACCTAAT...TAACCATTTCCAGGATGGTGGACTATGAAATATACTCGTGTTTATAATCTGAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS-3UTR GCA 90 bp | CTTCAGATTATAAACACGAGTATATTTCATAGTCCACCATCCTGGAAATGGTTACCTTTACATTCCAACTaGACTCCTTTGCCTATGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LQIINTSIFHSPPSWKWLPLHSN*TPLPMC Trigger: GCACATAGGCAAAGGAGTGCAGTTGGAATGTAAAGG...TAACCATTTCCAGGATGGTGGACTATGAAATATACTCGTGTTTATAATCTGAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS-3UTR CCA 90 bp | CTTCAGATTATAAACACGAGTATATTTCATAGTCCACCATCCTGGAAATGGTTATTGGCGGGTGTTGGATaGTTTGAATCGAATGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LQIINTSIFHSPPSWKWLLAGVG*FESNVL Trigger: AAGGACATTCGATTCAAACCATCCAACACCCGCCAA...TAACCATTTCCAGGATGGTGGACTATGAAATATACTCGTGTTTATAATCTGAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS-3UTR CCA 90 bp | CTTCAGATTATAAACACGAGTATATTTCATAGTCCACCATCCTGGAAATGGTTAAAGCTCATTGTGAACTaGCCAGTAATGTCCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LQIINTSIFHSPPSWKWLKLIVN*PVMSRM Trigger: CATCCTGGACATTACTGGCCAGTTCACAATGAGCTT...TAACCATTTCCAGGATGGTGGACTATGAAATATACTCGTGTTTATAATCTGAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS-3UTR TCA 90 bp | CTTCAGATTATAAACACGAGTATATTTCATAGTCCACCATCCTGGAAATGGTTATCCCCACCTTGTCTATaGCACATCAAACTATGTACA | + |
|
Preference number: 4 (lower is better) Translates to: LQIINTSIFHSPPSWKWLSPPCL*HIKLCT Trigger: TGTACATAGTTTGATGTGTCATAGACAAGGTGGGGA...TAACCATTTCCAGGATGGTGGACTATGAAATATACTCGTGTTTATAATCTGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS-3UTR CCA 90 bp | CTTCAGATTATAAACACGAGTATATTTCATAGTCCACCATCCTGGAAATGGTTACAAATTAGGTGTGTATaGTGCAGTCCTACTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LQIINTSIFHSPPSWKWLQIRCV*CSPTSS Trigger: ACTGGAAGTAGGACTGCACCATACACACCTAATTTG...TAACCATTTCCAGGATGGTGGACTATGAAATATACTCGTGTTTATAATCTGAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS-3UTR CCA 90 bp | CTTCAGATTATAAACACGAGTATATTTCATAGTCCACCATCCTGGAAATGGTTATTTCAAAGTAAGCAATaGAGCACCAGTACTCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LQIINTSIFHSPPSWKWLFQSKQ*STSTQE Trigger: CTCCTGAGTACTGGTGCTCCATTGCTTACTTTGAAA...TAACCATTTCCAGGATGGTGGACTATGAAATATACTCGTGTTTATAATCTGAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS GCA 90 bp | AGGGCCAGGGATGTTCCCTGCCACGGCCGCCGCCTGAGCAGCAGCTaGAGCTTGCGCAGTGGCCGCCTGTTGCTGCATCTGCCGGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: RARDVPCHGRRLSSS*SLRSGRLLLHLPVT Trigger: TGTCACCGGCAGATGCAGCAACAGGCGGCCACTGCGCAAGCTGCAGCTGCTGCTCAGGCGGCGGCCGTGGCAGGGAACATCCCTGGCCCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS CCA 90 bp | TCCCTGCCACGGCCGCCGCCTGAGCAGCAGCTGCAGCTTGCGCAGTaGCCGCCTGTTGCTGCATCTGCCGGTGACACTGCCGCAGATCAA | + |
|
Preference number: 5 (lower is better) Translates to: SLPRPPPEQQLQLAQ*PPVAASAGDTAADQ Trigger: TTGATCTGCGGCAGTGTCACCGGCAGATGCAGCAACAGGCGGCCACTGCGCAAGCTGCAGCTGCTGCTCAGGCGGCGGCCGTGGCAGGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS-3UTR CAA 90 bp | CGACTCCTCCATACAGAACCAGCAGGGAAGACTCAGCAAGAACTGCATCTTTCTCGCAGTGGCCGCCTGTaGCTGCATCTGCCGGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: RLLHTEPAGKTQQELHLSRSGRL*LHLPVT Trigger: TGTCACCGGCAGATGCAGCAACAGGCGGCCACTGCG...AGAAAGATGCAGTTCTTGCTGAGTCTTCCCTGCTGGTTCTGTATGGAGGAGTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025393.14 |
||
| CDS GCA 90 bp | GCACCAGTACTCAGGAGCAGGATGATTGGAAATGGGAGGCTGGAATaGAAGCTCATTGTGAACTGGCCAGTAATGTCCAGGATGGGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: APVLRSRMIGNGRLE*KLIVNWPVMSRMGR Trigger: CCGCCCCATCCTGGACATTACTGGCCAGTTCACAATGAGCTTGCATTCCAGCCTCCCATTTCCAATCATCCTGCTCCTGAGTACTGGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS-3UTR CAA 90 bp | CTGTCTGCTAAGAGCAAGGCAGCAAACACATCTCTCAACCCTTTAGGAAAAGACCGCAGTGGCCGCCTGTaGCTGCATCTGCCGGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: LSAKSKAANTSLNPLGKDRSGRL*LHLPVT Trigger: TGTCACCGGCAGATGCAGCAACAGGCGGCCACTGCG...GTCTTTTCCTAAAGGGTTGAGAGATGTGTTTGCTGCCTTGCTCTTAGCAGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS CCA 90 bp | CGCTGTACGTCTCCGTTGATGCGCGATTACTTGGCGGGTGTTGGATaGTTTGAATCGAATGTCCTTCAGTGGGTAAGGACGGCTGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: RCTSPLMRDYLAGVG*FESNVLQWVRTAVL Trigger: AAGGACAGCCGTCCTTACCCACTGAAGGACATTCGATTCAAACCATCCAACACCCGCCAAGTAATCGCGCATCAACGGAGACGTACAGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS-3UTR CAA 90 bp | ACTGCCACCTTGCAGAACAGTGAAGCAGCAGGCAGAGTGACACTGCTTTTAGTGGAAGCCACAGGAATGTaGGGGAAGTTGGTGGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TATLQNSEAAGRVTLLLVEATGM*GKLVVL Trigger: CAGCACCACCAACTTCCCCAACATTCCTGTGGCTTC...CACTAAAAGCAGTGTCACTCTGCCTGCTGCTTCACTGTTCTGCAAGGTGGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025393.14 |
||
| CDS-3UTR CAA 90 bp | AGTCAATGTGTCTTAACTCCTCCACTTCAATCTCTACAAAGTCACCGCCAAGTGAGCAGCAGCTGCAGCTaGCGCAGTGGCCGCCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SQCVLTPPLQSLQSHRQVSSSCS*RSGRLL Trigger: CAACAGGCGGCCACTGCGCAAGCTGCAGCTGCTGCT...CACTTGGCGGTGACTTTGTAGAGATTGAAGTGGAGGAGTTAAGACACATTGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025393.14 |
||
| CDS CCA 90 bp | CTATGTGCAACCTCGCTCTCTCAATCGCTTCTGTCCTGTGGACATTaGAGAGTTGACCCAAGCAAAAGCGATCTCCTCCCGAAGGATCCA | + |
|
Preference number: 5 (lower is better) Translates to: LCATSLSQSLLSCGH*RVDPSKSDLLPKDP Trigger: TGGATCCTTCGGGAGGAGATCGCTTTTGCTTGGGTCAACTCTCCAATGTCCACAGGACAGAAGCGATTGAGAGAGCGAGGTTGCACATAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS-3UTR CAA 90 bp | GAACCAGCAGGGAAGACTCAGCAAGAACTGCATCTTTCTGATCTTCAAGCACTGCGCTGTACGTCTCCGTaGATGCGCGATTACTTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: EPAGKTQQELHLSDLQALRCTSP*MRDYLA Trigger: CGCCAAGTAATCGCGCATCAACGGAGACGTACAGCG...CAGTGCTTGAAGATCAGAAAGATGCAGTTCTTGCTGAGTCTTCCCTGCTGGTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS TCA 90 bp | TACGTCTCCGTTGATGCGCGATTACTTGGCGGGTGTTGGATGGTTTaGATCGAATGTCCTTCAGTGGGTAAGGACGGCTGTCCTTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: YVSVDARLLGGCWMV*IECPSVGKDGCPSK Trigger: CTTTGAAGGACAGCCGTCCTTACCCACTGAAGGACATTCGATTCAAACCATCCAACACCCGCCAAGTAATCGCGCATCAACGGAGACGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS TCA 90 bp | TCCCGAAGGATCCACATAGCCATCCACAGTCACAACAGGGCAGCTTaGAGGGACCTTAAACGTCTCTCCTACCTGAACGTCCATTTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: SRRIHIAIHSHNRAA*RDLKRLSYLNVHFK Trigger: TTTGAAATGGACGTTCAGGTAGGAGAGACGTTTAAGGTCCCTTCAAGCTGCCCTGTTGTGACTGTGGATGGCTATGTGGATCCTTCGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS GCA 90 bp | CTAAGGCACCTGACCCAAACGTCACCTTCACCTTTACATTCCAACTaGACTCCTTTGCCTATGTGCAACCTCGCTCTCTCAATCGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LRHLTQTSPSPLHSN*TPLPMCNLALSIAS Trigger: AGAAGCGATTGAGAGAGCGAGGTTGCACATAGGCAAAGGAGTGCAGTTGGAATGTAAAGGTGAAGGTGACGTTTGGGTCAGGTGCCTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS GCA 90 bp | CTTTATATACGCGCTTGGGTAGATCTTATGAACAGCGTCGCCAGGTaGTCGGCCAGCTTCTCTGTCCAGGTAGTAACTCTGTACAAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: LYIRAWVDLMNSVAR*SASFSVQVVTLYKD Trigger: GTCTTTGTACAGAGTTACTACCTGGACAGAGAAGCTGGCCGAGCACCTGGCGACGCTGTTCATAAGATCTACCCAAGCGCGTATATAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS CCA 90 bp | GTGCTGAAGATGGCCGTTTTGGTGGTGAGGCAAATTAGGTGTGTATaGTGCAGTCCTACTTCCAGTCCAGGTGGTAGTGCTGTTATGATG | + |
|
Preference number: 5 (lower is better) Translates to: VLKMAVLVVRQIRCV*CSPTSSPGGSAVMM Trigger: CATCATAACAGCACTACCACCTGGACTGGAAGTAGGACTGCACCATACACACCTAATTTGCCTCACCACCAAAACGGCCATCTTCAGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS-3UTR CAA 90 bp | CAGTTTCTGTCTGCTAAGAGCAAGGCAGCAAACACATCTCTCAACCCTTTAGGAGAAGCCACAGGAATGTaGGGGAAGTTGGTGGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QFLSAKSKAANTSLNPLGEATGM*GKLVVL Trigger: CAGCACCACCAACTTCCCCAACATTCCTGTGGCTTC...TCCTAAAGGGTTGAGAGATGTGTTTGCTGCCTTGCTCTTAGCAGACAGAAACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS-3UTR CAA 90 bp | CAGTTTCTGTCTGCTAAGAGCAAGGCAGCAAACACATCTCTCAACCCTTTAGGATACTGGCCGGCTGACTaGTGGAAGCCACAGGAATGT | + |
|
Preference number: 5 (lower is better) Translates to: QFLSAKSKAANTSLNPLGYWPAD*WKPQEC Trigger: ACATTCCTGTGGCTTCCACAAGTCAGCCGGCCAGTA...TCCTAAAGGGTTGAGAGATGTGTTTGCTGCCTTGCTCTTAGCAGACAGAAACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS GCA 90 bp | CTGAAGATGGCCGTTTTGGTGGTGAGGCAAATTAGGTGTGTATGGTaGAGTCCTACTTCCAGTCCAGGTGGTAGTGCTGTTATGATGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LKMAVLVVRQIRCVW*SPTSSPGGSAVMMV Trigger: TACCATCATAACAGCACTACCACCTGGACTGGAAGTAGGACTGCACCATACACACCTAATTTGCCTCACCACCAAAACGGCCATCTTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS CCA 90 bp | GATTACTTGGCGGGTGTTGGATGGTTTGAATCGAATGTCCTTCAGTaGGTAAGGACGGCTGTCCTTCAAAGTCGTGAACGTACTCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: DYLAGVGWFESNVLQ*VRTAVLQSRERTHP Trigger: AGGATGAGTACGTTCACGACTTTGAAGGACAGCCGTCCTTACCCACTGAAGGACATTCGATTCAAACCATCCAACACCCGCCAAGTAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS-3UTR CAA 90 bp | GAACCAGCAGGGAAGACTCAGCAAGAACTGCATCTTTCTGATCTTCAAGCACTGGTGGACATTGGAGAGTaGACCCAAGCAAAAGCGATC | + |
|
Preference number: 5 (lower is better) Translates to: EPAGKTQQELHLSDLQALVDIGE*TQAKAI Trigger: GATCGCTTTTGCTTGGGTCAACTCTCCAATGTCCAC...CAGTGCTTGAAGATCAGAAAGATGCAGTTCTTGCTGAGTCTTCCCTGCTGGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS-3UTR CAA 90 bp | CTGTCTGCTAAGAGCAAGGCAGCAAACACATCTCTCAACCCTTTAGGAAAAGACTCCAACTGCACTCCTTaGCCTATGTGCAACCTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: LSAKSKAANTSLNPLGKDSNCTP*PMCNLA Trigger: AGCGAGGTTGCACATAGGCAAAGGAGTGCAGTTGGA...GTCTTTTCCTAAAGGGTTGAGAGATGTGTTTGCTGCCTTGCTCTTAGCAGACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS-3UTR CAA 90 bp | CAGTTTCTGTCTGCTAAGAGCAAGGCAGCAAACACATCTCTCAACCCTTTAGGACTGAAGATGGCCGTTTaGGTGGTGAGGCAAATTAGG | + |
|
Preference number: 5 (lower is better) Translates to: QFLSAKSKAANTSLNPLGLKMAV*VVRQIR Trigger: CCTAATTTGCCTCACCACCAAAACGGCCATCTTCAG...TCCTAAAGGGTTGAGAGATGTGTTTGCTGCCTTGCTCTTAGCAGACAGAAACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS-3UTR CAA 90 bp | CTTCAGATTATAAACACGAGTATATTTCATAGTCCACCATCCTGGAAATGGTTAAGCAGCAGCTGCAGCTaGCGCAGTGGCCGCCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LQIINTSIFHSPPSWKWLSSSCS*RSGRLL Trigger: CAACAGGCGGCCACTGCGCAAGCTGCAGCTGCTGCT...TAACCATTTCCAGGATGGTGGACTATGAAATATACTCGTGTTTATAATCTGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS TCA 90 bp | ATCGAATGTCCTTCAGTGGGTAAGGACGGCTGTCCTTCAAAGTCGTaGACGTACTCATCCTTCACTAACATACTTGGAGCATTACTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: IECPSVGKDGCPSKS*TYSSFTNILGALLC Trigger: GCAGAGTAATGCTCCAAGTATGTTAGTGAAGGATGAGTACGTTCACGACTTTGAAGGACAGCCGTCCTTACCCACTGAAGGACATTCGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS-3UTR CAA 90 bp | TTTCTGTCTGCTAAGAGCAAGGCAGCAAACACATCTCTCAACCCTTTAGGAAAATCCAACTGCACTCCTTaGCCTATGTGCAACCTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: FLSAKSKAANTSLNPLGKSNCTP*PMCNLA Trigger: AGCGAGGTTGCACATAGGCAAAGGAGTGCAGTTGGA...TTTTCCTAAAGGGTTGAGAGATGTGTTTGCTGCCTTGCTCTTAGCAGACAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS-3UTR CAA 90 bp | CAGTTTCTGTCTGCTAAGAGCAAGGCAGCAAACACATCTCTCAACCCTTTAGGATGCTTTAGTTCATTCTaGTGTAGATCAGGCCACCTC | + |
|
Preference number: 5 (lower is better) Translates to: QFLSAKSKAANTSLNPLGCFSSF*CRSGHL Trigger: GAGGTGGCCTGATCTACACAAGAATGAACTAAAGCA...TCCTAAAGGGTTGAGAGATGTGTTTGCTGCCTTGCTCTTAGCAGACAGAAACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS-3UTR CAA 90 bp | AGTCAATGTGTCTTAACTCCTCCACTTCAATCTCTACAAAGTCACCGCCAAGTGCGGGTGTTGGATGGTTaGAATCGAATGTCCTTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SQCVLTPPLQSLQSHRQVRVLDG*NRMSFS Trigger: ACTGAAGGACATTCGATTCAAACCATCCAACACCCG...CACTTGGCGGTGACTTTGTAGAGATTGAAGTGGAGGAGTTAAGACACATTGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025393.14 |
||
| CDS-3UTR CAA 90 bp | CAGTTTCTGTCTGCTAAGAGCAAGGCAGCAAACACATCTCTCAACCCTTTAGGAATTACTTGGCGGGTGTaGGATGGTTTGAATCGAATG | + |
|
Preference number: 5 (lower is better) Translates to: QFLSAKSKAANTSLNPLGITWRV*DGLNRM Trigger: CATTCGATTCAAACCATCCAACACCCGCCAAGTAAT...TCCTAAAGGGTTGAGAGATGTGTTTGCTGCCTTGCTCTTAGCAGACAGAAACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS-3UTR CAA 90 bp | TTTCTGTCTGCTAAGAGCAAGGCAGCAAACACATCTCTCAACCCTTTAGGAAAACTGAAGATGGCCGTTTaGGTGGTGAGGCAAATTAGG | + |
|
Preference number: 5 (lower is better) Translates to: FLSAKSKAANTSLNPLGKLKMAV*VVRQIR Trigger: CCTAATTTGCCTCACCACCAAAACGGCCATCTTCAG...TTTTCCTAAAGGGTTGAGAGATGTGTTTGCTGCCTTGCTCTTAGCAGACAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
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| CDS-3UTR CAA 90 bp | AGTCAATGTGTCTTAACTCCTCCACTTCAATCTCTACAAAGTCACCGCCAAGTGATTACTTGGCGGGTGTaGGATGGTTTGAATCGAATG | + |
|
Preference number: 5 (lower is better) Translates to: SQCVLTPPLQSLQSHRQVITWRV*DGLNRM Trigger: CATTCGATTCAAACCATCCAACACCCGCCAAGTAAT...CACTTGGCGGTGACTTTGTAGAGATTGAAGTGGAGGAGTTAAGACACATTGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025393.14 |
||
| CDS-3UTR CAA 90 bp | CTTCAGATTATAAACACGAGTATATTTCATAGTCCACCATCCTGGAAATGGTTACGCTGTACGTCTCCGTaGATGCGCGATTACTTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: LQIINTSIFHSPPSWKWLRCTSP*MRDYLA Trigger: CGCCAAGTAATCGCGCATCAACGGAGACGTACAGCG...TAACCATTTCCAGGATGGTGGACTATGAAATATACTCGTGTTTATAATCTGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS-3UTR CAA 90 bp | CTGTCTGCTAAGAGCAAGGCAGCAAACACATCTCTCAACCCTTTAGGAAAAGACCCTTTATATACGCGCTaGGGTAGATCTTATGAACAG | + |
|
Preference number: 5 (lower is better) Translates to: LSAKSKAANTSLNPLGKDPLYTR*GRSYEQ Trigger: CTGTTCATAAGATCTACCCAAGCGCGTATATAAAGG...GTCTTTTCCTAAAGGGTTGAGAGATGTGTTTGCTGCCTTGCTCTTAGCAGACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
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| CDS-3UTR CAA 90 bp | AGTCAATGTGTCTTAACTCCTCCACTTCAATCTCTACAAAGTCACCGCCAAGTGTTCACTTTCCCCACCTaGTCTATGACACATCAAACT | + |
|
Preference number: 5 (lower is better) Translates to: SQCVLTPPLQSLQSHRQVFTFPT*SMTHQT Trigger: AGTTTGATGTGTCATAGACAAGGTGGGGAAAGTGAA...CACTTGGCGGTGACTTTGTAGAGATTGAAGTGGAGGAGTTAAGACACATTGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025393.14 |
||
| CDS-3UTR CAA 90 bp | TTTCTGTCTGCTAAGAGCAAGGCAGCAAACACATCTCTCAACCCTTTAGGAAAATGCTTTAGTTCATTCTaGTGTAGATCAGGCCACCTC | + |
|
Preference number: 5 (lower is better) Translates to: FLSAKSKAANTSLNPLGKCFSSF*CRSGHL Trigger: GAGGTGGCCTGATCTACACAAGAATGAACTAAAGCA...TTTTCCTAAAGGGTTGAGAGATGTGTTTGCTGCCTTGCTCTTAGCAGACAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS-3UTR CAA 90 bp | CTTCAGATTATAAACACGAGTATATTTCATAGTCCACCATCCTGGAAATGGTTATACTGGCCGGCTGACTaGTGGAAGCCACAGGAATGT | + |
|
Preference number: 5 (lower is better) Translates to: LQIINTSIFHSPPSWKWLYWPAD*WKPQEC Trigger: ACATTCCTGTGGCTTCCACAAGTCAGCCGGCCAGTA...TAACCATTTCCAGGATGGTGGACTATGAAATATACTCGTGTTTATAATCTGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS-3UTR CAA 90 bp | AGTCAATGTGTCTTAACTCCTCCACTTCAATCTCTACAAAGTCACCGCCAAGTGCCTTTATATACGCGCTaGGGTAGATCTTATGAACAG | + |
|
Preference number: 5 (lower is better) Translates to: SQCVLTPPLQSLQSHRQVPLYTR*GRSYEQ Trigger: CTGTTCATAAGATCTACCCAAGCGCGTATATAAAGG...CACTTGGCGGTGACTTTGTAGAGATTGAAGTGGAGGAGTTAAGACACATTGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025393.14 |
||
| CDS TCA 90 bp | TCAATTGCTCTTTTTGCAAAGGTTTCACTTTCCCCACCTTGTCTATaGCACATCAAACTATGTACAATGCTCAGACAGGCATCGTTACTT | + |
|
Preference number: 5 (lower is better) Translates to: SIALFAKVSLSPPCL*HIKLCTMLRQASLL Trigger: AAGTAACGATGCCTGTCTGAGCATTGTACATAGTTTGATGTGTCATAGACAAGGTGGGGAAAGTGAAACCTTTGCAAAAAGAGCAATTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS TCA 90 bp | AGTCGTCCATCCAATGTTCTCTGTATGGTGACACACTTGCTAGGATaGGCTCCATTTGTAGTTATAGCTGTTATTAAAGAATCCAATTCA | + |
|
Preference number: 5 (lower is better) Translates to: SRPSNVLCMVTHLLG*APFVVIAVIKESNS Trigger: TGAATTGGATTCTTTAATAACAGCTATAACTACAAATGGAGCTCATCCTAGCAAGTGTGTCACCATACAGAGAACATTGGATGGACGACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS-3UTR CAA 90 bp | CTTCAGATTATAAACACGAGTATATTTCATAGTCCACCATCCTGGAAATGGTTATTCACTTTCCCCACCTaGTCTATGACACATCAAACT | + |
|
Preference number: 5 (lower is better) Translates to: LQIINTSIFHSPPSWKWLFTFPT*SMTHQT Trigger: AGTTTGATGTGTCATAGACAAGGTGGGGAAAGTGAA...TAACCATTTCCAGGATGGTGGACTATGAAATATACTCGTGTTTATAATCTGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS TCA 90 bp | TATGGATTCACACAGACACTGTCACATTTTAAGTCAAACGCATACTaGCAATATTTAACATGCTTTAGTTCATTCTTGTGTAGATCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: YGFTQTLSHFKSNAY*QYLTCFSSFLCRSG Trigger: GCCTGATCTACACAAGAATGAACTAAAGCATGTTAAATATTGTCAGTATGCGTTTGACTTAAAATGTGACAGTGTCTGTGTGAATCCATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS CAA 72 bp | CTGAGCAGCAGCTGCAGCTTGCGCAGTGGCCGCCTGTaGCTGCATCTGCCGGTGACACTGCCGCAGATCAAA | + |
|
Preference number: 6 (lower is better) Translates to: LSSSCSLRSGRL*LHLPVTLPQIK Trigger: TTTGATCTGCGGCAGTGTCACCGGCAGATGCAGCAACAGGCGGCCACTGCGCAAGCTGCAGCTGCTGCTCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS CAA 72 bp | CCGGGGCTAACAGAGCCGGGGCGCTGTACGTCTCCGTaGATGCGCGATTACTTGGCGGGTGTTGGATGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: PGLTEPGRCTSP*MRDYLAGVGWF Trigger: AAACCATCCAACACCCGCCAAGTAATCGCGCATCAACGGAGACGTACAGCGCCCCGGCTCTGTTAGCCCCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS GCA 72 bp | CGCGCTTGGGTAGATCTTATGAACAGCGTCGCCAGGTaGTCGGCCAGCTTCTCTGTCCAGGTAGTAACTCTG | + |
|
Preference number: 6 (lower is better) Translates to: RAWVDLMNSVAR*SASFSVQVVTL Trigger: CAGAGTTACTACCTGGACAGAGAAGCTGGCCGAGCACCTGGCGACGCTGTTCATAAGATCTACCCAAGCGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS CAA 72 bp | GGGCGGCATAGGCGGGTGGTGCTGAAGATGGCCGTTTaGGTGGTGAGGCAAATTAGGTGTGTATGGTGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: GRHRRVVLKMAV*VVRQIRCVWCS Trigger: ACTGCACCATACACACCTAATTTGCCTCACCACCAAAACGGCCATCTTCAGCACCACCCGCCTATGCCGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS CAA 72 bp | CCGGGGCGCTGTACGTCTCCGTTGATGCGCGATTACTaGGCGGGTGTTGGATGGTTTGAATCGAATGTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: PGRCTSPLMRDY*AGVGWFESNVL Trigger: AAGGACATTCGATTCAAACCATCCAACACCCGCCAAGTAATCGCGCATCAACGGAGACGTACAGCGCCCCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS CAA 90 bp | CTAACAGAGCCGGGGCGCTGTACGTCTCCGTTGATGCGCGATTACTaGGCGGGTGTTGGATGGTTTGAATCGAATGTCCTTCAGTGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: LTEPGRCTSPLMRDY*AGVGWFESNVLQWV Trigger: TACCCACTGAAGGACATTCGATTCAAACCATCCAACACCCGCCAAGTAATCGCGCATCAACGGAGACGTACAGCGCCCCGGCTCTGTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS CCA 72 bp | ACCTCGCTCTCTCAATCGCTTCTGTCCTGTGGACATTaGAGAGTTGACCCAAGCAAAAGCGATCTCCTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: TSLSQSLLSCGH*RVDPSKSDLLP Trigger: CGGGAGGAGATCGCTTTTGCTTGGGTCAACTCTCCAATGTCCACAGGACAGAAGCGATTGAGAGAGCGAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS TCA 72 bp | CTCTCAATCGCTTCTGTCCTGTGGACATTGGAGAGTTaGCCCAAGCAAAAGCGATCTCCTCCCGAAGGATCC | + |
|
Preference number: 6 (lower is better) Translates to: LSIASVLWTLES*PKQKRSPPEGS Trigger: GGATCCTTCGGGAGGAGATCGCTTTTGCTTGGGTCAACTCTCCAATGTCCACAGGACAGAAGCGATTGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS TCA 72 bp | GTTGATGCGCGATTACTTGGCGGGTGTTGGATGGTTTaGATCGAATGTCCTTCAGTGGGTAAGGACGGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: VDARLLGGCWMV*IECPSVGKDGC Trigger: ACAGCCGTCCTTACCCACTGAAGGACATTCGATTCAAACCATCCAACACCCGCCAAGTAATCGCGCATCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
||
| CDS TCA 72 bp | ATCCACATAGCCATCCACAGTCACAACAGGGCAGCTTaGAGGGACCTTAAACGTCTCTCCTACCTGAACGTC | + |
|
Preference number: 6 (lower is better) Translates to: IHIAIHSHNRAA*RDLKRLSYLNV Trigger: GACGTTCAGGTAGGAGAGACGTTTAAGGTCCCTTCAAGCTGCCCTGTTGTGACTGTGGATGGCTATGTGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
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| CDS GCA 72 bp | GCCGTTTTGGTGGTGAGGCAAATTAGGTGTGTATGGTaGAGTCCTACTTCCAGTCCAGGTGGTAGTGCTGTT | + |
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Preference number: 6 (lower is better) Translates to: AVLVVRQIRCVW*SPTSSPGGSAV Trigger: AACAGCACTACCACCTGGACTGGAAGTAGGACTGCACCATACACACCTAATTTGCCTCACCACCAAAACGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
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| CDS CCA 72 bp | GCGGGTGTTGGATGGTTTGAATCGAATGTCCTTCAGTaGGTAAGGACGGCTGTCCTTCAAAGTCGTGAACGT | + |
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Preference number: 6 (lower is better) Translates to: AGVGWFESNVLQ*VRTAVLQSRER Trigger: ACGTTCACGACTTTGAAGGACAGCCGTCCTTACCCACTGAAGGACATTCGATTCAAACCATCCAACACCCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
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| CDS CCA 72 bp | ATGGCCGTTTTGGTGGTGAGGCAAATTAGGTGTGTATaGTGCAGTCCTACTTCCAGTCCAGGTGGTAGTGCT | + |
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Preference number: 6 (lower is better) Translates to: MAVLVVRQIRCV*CSPTSSPGGSA Trigger: AGCACTACCACCTGGACTGGAAGTAGGACTGCACCATACACACCTAATTTGCCTCACCACCAAAACGGCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
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| CDS CCA 72 bp | ACACTGCCGCAGATCAAAGACCTTTATATACGCGCTTaGGTAGATCTTATGAACAGCGTCGCCAGGTGCTCG | + |
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Preference number: 6 (lower is better) Translates to: TLPQIKDLYIRA*VDLMNSVARCS Trigger: CGAGCACCTGGCGACGCTGTTCATAAGATCTACCCAAGCGCGTATATAAAGGTCTTTGATCTGCGGCAGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
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| CDS CAA 72 bp | GACACTGCCGCAGATCAAAGACCTTTATATACGCGCTaGGGTAGATCTTATGAACAGCGTCGCCAGGTGCTC | + |
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Preference number: 6 (lower is better) Translates to: DTAADQRPLYTR*GRSYEQRRQVL Trigger: GAGCACCTGGCGACGCTGTTCATAAGATCTACCCAAGCGCGTATATAAAGGTCTTTGATCTGCGGCAGTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
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| CDS GCA 72 bp | CGTCACCTTCACCTTTACATTCCAACTGCACTCCTTTaGCTATGTGCAACCTCGCTCTCTCAATCGCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: RHLHLYIPTALL*LCATSLSQSLL Trigger: CAGAAGCGATTGAGAGAGCGAGGTTGCACATAGGCAAAGGAGTGCAGTTGGAATGTAAAGGTGAAGGTGACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
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| CDS GCA 72 bp | CTGACCCAAACGTCACCTTCACCTTTACATTCCAACTaGACTCCTTTGCCTATGTGCAACCTCGCTCTCTCA | + |
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Preference number: 6 (lower is better) Translates to: LTQTSPSPLHSN*TPLPMCNLALS Trigger: TGAGAGAGCGAGGTTGCACATAGGCAAAGGAGTGCAGTTGGAATGTAAAGGTGAAGGTGACGTTTGGGTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
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| CDS CCA 72 bp | AGTCCAGGTGGTAGTGCTGTTATGATGGTAAGTAGCTaGCTGAGCAGTAAATCCATTCTGCTGCTGTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: SPGGSAVMMVSS*LSSKSILLLSW Trigger: CCAGGACAGCAGCAGAATGGATTTACTGCTCAGCCAGCTACTTACCATCATAACAGCACTACCACCTGGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
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| CDS TCA 72 bp | CCTTCAGTGGGTAAGGACGGCTGTCCTTCAAAGTCGTaGACGTACTCATCCTTCACTAACATACTTGGAGCA | + |
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Preference number: 6 (lower is better) Translates to: PSVGKDGCPSKS*TYSSFTNILGA Trigger: TGCTCCAAGTATGTTAGTGAAGGATGAGTACGTTCACGACTTTGAAGGACAGCCGTCCTTACCCACTGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
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| CDS CAA 72 bp | ACGTCACCTTCACCTTTACATTCCAACTGCACTCCTTaGCCTATGTGCAACCTCGCTCTCTCAATCGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: TSPSPLHSNCTP*PMCNLALSIAS Trigger: AGAAGCGATTGAGAGAGCGAGGTTGCACATAGGCAAAGGAGTGCAGTTGGAATGTAAAGGTGAAGGTGACGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
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| CDS CCA 72 bp | TCTCTCCTACCTGAACGTCCATTTCAAAGTAAGCAATaGAGCACCAGTACTCAGGAGCAGGATGATTGGAAA | + |
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Preference number: 6 (lower is better) Translates to: SLLPERPFQSKQ*STSTQEQDDWK Trigger: TTTCCAATCATCCTGCTCCTGAGTACTGGTGCTCCATTGCTTACTTTGAAATGGACGTTCAGGTAGGAGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
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| CDS GCA 72 bp | CCCCACCTTGTCTATGACACATCAAACTATGTACAATaGTCAGACAGGCATCGTTACTTGTTGGTGTATTTG | + |
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Preference number: 6 (lower is better) Translates to: PHLVYDTSNYVQ*SDRHRYLLVYL Trigger: CAAATACACCAACAAGTAACGATGCCTGTCTGAGCATTGTACATAGTTTGATGTGTCATAGACAAGGTGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
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| CDS TCA 72 bp | CTTTTTGCAAAGGTTTCACTTTCCCCACCTTGTCTATaGCACATCAAACTATGTACAATGCTCAGACAGGCA | + |
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Preference number: 6 (lower is better) Translates to: LFAKVSLSPPCL*HIKLCTMLRQA Trigger: TGCCTGTCTGAGCATTGTACATAGTTTGATGTGTCATAGACAAGGTGGGGAAAGTGAAACCTTTGCAAAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
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| CDS GCA 72 bp | TACTCATCCTTCACTAACATACTTGGAGCATTACTCTaGAGTGTTAATCCTGAGAGATCAATTCCAGGTGAG | + |
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Preference number: 6 (lower is better) Translates to: YSSFTNILGALL*SVNPERSIPGE Trigger: CTCACCTGGAATTGATCTCTCAGGATTAACACTGCAGAGTAATGCTCCAAGTATGTTAGTGAAGGATGAGTA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
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| CDS CAA 90 bp | CAAACTCTCAATTGCTCTTTTTGCAAAGGTTTCACTTTCCCCACCTaGTCTATGACACATCAAACTATGTACAATGCTCAGACAGGCATC | + |
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Preference number: 6 (lower is better) Translates to: QTLNCSFCKGFTFPT*SMTHQTMYNAQTGI Trigger: GATGCCTGTCTGAGCATTGTACATAGTTTGATGTGTCATAGACAAGGTGGGGAAAGTGAAACCTTTGCAAAAAGAGCAATTGAGAGTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
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| CDS TCA 72 bp | TCCAATGTTCTCTGTATGGTGACACACTTGCTAGGATaGGCTCCATTTGTAGTTATAGCTGTTATTAAAGAA | + |
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Preference number: 6 (lower is better) Translates to: SNVLCMVTHLLG*APFVVIAVIKE Trigger: TTCTTTAATAACAGCTATAACTACAAATGGAGCTCATCCTAGCAAGTGTGTCACCATACAGAGAACATTGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025393.14 ENSMUST00000114939.2 |
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