Pregenerated sensors for SMAD3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032402Ensembl transcript IDs: ENSMUST00000034973.10, ENSMUST00000133108.3, ENSMUST00000137713.8, ENSMUST00000154323.8
Found 167 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCAGCTGCCATGGCAGGCCAGCACAGGACTCTAACCCACGTGGCTaGGGCTACCTGAACCAGCAGGAAGGAGGGGCAGCAGAGGAGAAG | + |
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Preference number: 1 (lower is better) Translates to: ASCHGRPAQDSNPRG*GYLNQQEGGAAEEK Trigger: CTTCTCCTCTGCTGCCCCTCCTTCCTGCTGGTTCAGGTAGCCCCAGCCACGTGGGTTAGAGTCCTGTGCTGGCCTGCCATGGCAGCTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| 3UTR GCA 90 bp | GGGGTAAAGAGCCAACTTCTCAGGAGTGCTGAAGACAAAGGCCTCTaGCTGGGGGTCGGTGTCAGTGGGCACCCAGGGCTGGAACAGCAC | + |
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Preference number: 1 (lower is better) Translates to: GVKSQLLRSAEDKGL*LGVGVSGHPGLEQH Trigger: GTGCTGTTCCAGCCCTGGGTGCCCACTGACACCGACCCCCAGGCAGAGGCCTTTGTCTTCAGCACTCCTGAGAAGTTGGCTCTTTACCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| 3UTR TCA 90 bp | AGGAGCCACAGCAGAGCGTTGGTGTGTTCTGACTCAGAGCATGCGTaGCAGGCAGCCAGGCAGTTCCGAGGACTCGTGTGTCTGAAGCAG | + |
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Preference number: 1 (lower is better) Translates to: RSHSRALVCSDSEHA*QAARQFRGLVCLKQ Trigger: CTGCTTCAGACACACGAGTCCTCGGAACTGCCTGGCTGCCTGTCACGCATGCTCTGAGTCAGAACACACCAACGCTCTGCTGTGGCTCCT 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| 3UTR GCA 90 bp | AGGCATCTGTGTCTCAAGGAGGATCAGCATGCCCAGCTGGAAATATaGCACAGGCTCCTGCAGGAGGGGCACCAGGATGTGCTCCAAGAG | + |
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Preference number: 1 (lower is better) Translates to: RHLCLKEDQHAQLEI*HRLLQEGHQDVLQE Trigger: CTCTTGGAGCACATCCTGGTGCCCCTCCTGCAGGAGCCTGTGGCATATTTCCAGCTGGGCATGCTGATCCTCCTTGAGACACAGATGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| 3UTR CCA 90 bp | ACTCACACAGGCATCTGTGTCTCAAGGAGGATCAGCATGCCCAGCTaGAAATATGCCACAGGCTCCTGCAGGAGGGGCACCAGGATGTGC | + |
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Preference number: 1 (lower is better) Translates to: THTGICVSRRISMPS*KYATGSCRRGTRMC Trigger: GCACATCCTGGTGCCCCTCCTGCAGGAGCCTGTGGCATATTTCCAGCTGGGCATGCTGATCCTCCTTGAGACACAGATGCCTGTGTGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| 3UTR GCA 90 bp | GGGACTGTTCAGGGCGATAGCCATGCATCCACATGTTCCCCCGTCTaGAATGCCACATCTTCATGGTTGACCCACATCCTGGTGTGTGGC | + |
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Preference number: 1 (lower is better) Translates to: GTVQGDSHASTCSPV*NATSSWLTHILVCG Trigger: GCCACACACCAGGATGTGGGTCAACCATGAAGATGTGGCATTGCAGACGGGGGAACATGTGGATGCATGGCTATCGCCCTGAACAGTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| 3UTR TCA 90 bp | ATGCATCCACATGTTCCCCCGTCTGCAATGCCACATCTTCATGGTTaGCCCACATCCTGGTGTGTGGCTTTCTACCCACTGGGAAGGTGC | + |
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Preference number: 1 (lower is better) Translates to: MHPHVPPSAMPHLHG*PTSWCVAFYPLGRC Trigger: GCACCTTCCCAGTGGGTAGAAAGCCACACACCAGGATGTGGGTCAACCATGAAGATGTGGCATTGCAGACGGGGGAACATGTGGATGCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| 3UTR GCA 90 bp | AGCTGGAAATATGCCACAGGCTCCTGCAGGAGGGGCACCAGGATGTaGTCCAAGAGTCTGGGGGCATCAGAAGATTTATCACATTGGAGG | + |
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Preference number: 1 (lower is better) Translates to: SWKYATGSCRRGTRM*SKSLGASEDLSHWR Trigger: CCTCCAATGTGATAAATCTTCTGATGCCCCCAGACTCTTGGAGCACATCCTGGTGCCCCTCCTGCAGGAGCCTGTGGCATATTTCCAGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| 3UTR CCA 90 bp | CCACAGGCTCCTGCAGGAGGGGCACCAGGATGTGCTCCAAGAGTCTaGGGGCATCAGAAGATTTATCACATTGGAGGGTACACTTTCTTC | + |
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Preference number: 1 (lower is better) Translates to: PQAPAGGAPGCAPRV*GHQKIYHIGGYTFF Trigger: GAAGAAAGTGTACCCTCCAATGTGATAAATCTTCTGATGCCCCCAGACTCTTGGAGCACATCCTGGTGCCCCTCCTGCAGGAGCCTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| 3UTR CCA 90 bp | CAGCCCACTTGCCCTGGCAGCAGCAAAGGCTTCTGGGATAAAAGATaGCTCCAATTTCCATTTGAAGTTCCCACTTCCAGTAGGGAGGGC | + |
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Preference number: 1 (lower is better) Translates to: QPTCPGSSKGFWDKR*LQFPFEVPTSSREG Trigger: GCCCTCCCTACTGGAAGTGGGAACTTCAAATGGAAATTGGAGCCATCTTTTATCCCAGAAGCCTTTGCTGCTGCCAGGGCAAGTGGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| 3UTR GCA 90 bp | CTTCCCAAGAGAGGCCCTGCTCTCCAGTCTAGGCTTTCTTCAAAATaGCAGGTATCTCTACAGTTGGTCTGGAAGGTAGCCAGCTGCCAT | + |
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Preference number: 1 (lower is better) Translates to: LPKRGPALQSRLSSK*QVSLQLVWKVASCH Trigger: ATGGCAGCTGGCTACCTTCCAGACCAACTGTAGAGATACCTGGCATTTTGAAGAAAGCCTAGACTGGAGAGCAGGGCCTCTCTTGGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| 3UTR GCA 90 bp | GGACTCAGAAATGGCAGCTTGGGGCTAAGAATGAAGTCAGATGTTTaGCTCTGCTCCAGACAACTCAGGCACATGCATGACTGCACAGGC | + |
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Preference number: 1 (lower is better) Translates to: GLRNGSLGLRMKSDV*LCSRQLRHMHDCTG Trigger: GCCTGTGCAGTCATGCATGTGCCTGAGTTGTCTGGAGCAGAGGCAAACATCTGACTTCATTCTTAGCCCCAAGCTGCCATTTCTGAGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| 3UTR TCA 90 bp | CTAGAATTTTCTCCTACAGCATTCTCCAGCAACTGGCCAATAACATaGAGGGGTGTACTCCCACTGTGTGCCTCCAGAAGCCGCCATCTG | + |
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Preference number: 1 (lower is better) Translates to: LEFSPTAFSSNWPIT*RGVLPLCASRSRHL Trigger: CAGATGGCGGCTTCTGGAGGCACACAGTGGGAGTACACCCCTTCATGTTATTGGCCAGTTGCTGGAGAATGCTGTAGGAGAAAATTCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| 3UTR GCA 90 bp | TGCTGTGAAGGCCGTTACTTAAAGGGGCCGGTAATGGAACACAAATaGCACACAAAGACAGGAGGAGCGAGCTCTAACCAGGTTCCTTCT | + |
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Preference number: 1 (lower is better) Translates to: CCEGRYLKGPVMEHK*HTKTGGASSNQVPS Trigger: AGAAGGAACCTGGTTAGAGCTCGCTCCTCCTGTCTTTGTGTGGCATTTGTGTTCCATTACCGGCCCCTTTAAGTAACGGCCTTCACAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| 3UTR CCA 90 bp | GGTGCCTTAGTTGAGTGGAATCGGTGTTCTTTGACAAGACCAAGTTaGATGGAGTTCTCTTCCAAGGTCATTTTCCCCAAGCCCGCCCTC | + |
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Preference number: 1 (lower is better) Translates to: GALVEWNRCSLTRPS*MEFSSKVIFPKPAL Trigger: GAGGGCGGGCTTGGGGAAAATGACCTTGGAAGAGAACTCCATCCAACTTGGTCTTGTCAAAGAACACCGATTCCACTCAACTAAGGCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| 3UTR CCA 90 bp | CTCTGTAGCAGGACAGGACTTCCATGGGAAATCCATGCAGAAACATaGGCTCGTCTTTTCACAACAGAAGCAGCAGCCAAGAAGCGAGTA | + |
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Preference number: 1 (lower is better) Translates to: LCSRTGLPWEIHAET*ARLFTTEAAAKKRV Trigger: TACTCGCTTCTTGGCTGCTGCTTCTGTTGTGAAAAGACGAGCCCATGTTTCTGCATGGATTTCCCATGGAAGTCCTGTCCTGCTACAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| 3UTR CCA 90 bp | AGGATGTGCTCCAAGAGTCTGGGGGCATCAGAAGATTTATCACATTaGAGGGTACACTTTCTTCCCCTCTGTAGCAGGACAGGACTTCCA | + |
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Preference number: 1 (lower is better) Translates to: RMCSKSLGASEDLSH*RVHFLPLCSRTGLP Trigger: TGGAAGTCCTGTCCTGCTACAGAGGGGAAGAAAGTGTACCCTCCAATGTGATAAATCTTCTGATGCCCCCAGACTCTTGGAGCACATCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| 3UTR TCA 90 bp | ACTCCATACTCCAGCCATGGAGAAAGGCACTTTCCTTTTGGACTGTaGCATCCCAGACCTCTGTCATTAAACAAGGAGTCAGGTGGCGAT | + |
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Preference number: 1 (lower is better) Translates to: TPYSSHGERHFPFGL*HPRPLSLNKESGGD Trigger: ATCGCCACCTGACTCCTTGTTTAATGACAGAGGTCTGGGATGTCACAGTCCAAAAGGAAAGTGCCTTTCTCCATGGCTGGAGTATGGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| 3UTR TCA 90 bp | CCCTTTTCATTTGCCCATGTCAGCCTGGGATGTCTTACCTCCTGGTaGATTGGCTTCTATAACTCTCAGCTTCCAAACCTCAGGGCAAGA | + |
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Preference number: 1 (lower is better) Translates to: PFSFAHVSLGCLTSW*IGFYNSQLPNLRAR Trigger: TCTTGCCCTGAGGTTTGGAAGCTGAGAGTTATAGAAGCCAATTCACCAGGAGGTAAGACATCCCAGGCTGACATGGGCAAATGAAAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| 3UTR GCA 90 bp | AGAAATGGCAGCTTGGGGCTAAGAATGAAGTCAGATGTTTGCCTCTaGTCCAGACAACTCAGGCACATGCATGACTGCACAGGCTACTTA | + |
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Preference number: 1 (lower is better) Translates to: RNGSLGLRMKSDVCL*SRQLRHMHDCTGYL Trigger: TAAGTAGCCTGTGCAGTCATGCATGTGCCTGAGTTGTCTGGAGCAGAGGCAAACATCTGACTTCATTCTTAGCCCCAAGCTGCCATTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| 3UTR CCA 90 bp | TGCTCCATTACAACTTCTCCAAAGGTAAACTCCATACTCCAGCCATaGAGAAAGGCACTTTCCTTTTGGACTGTGACATCCCAGACCTCT | + |
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Preference number: 1 (lower is better) Translates to: CSITTSPKVNSILQP*RKALSFWTVTSQTS Trigger: AGAGGTCTGGGATGTCACAGTCCAAAAGGAAAGTGCCTTTCTCCATGGCTGGAGTATGGAGTTTACCTTTGGAGAAGTTGTAATGGAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| 3UTR GCA 90 bp | GAAATAATTTACACTCGTTTTCTCTGTAATTGCCGCTGGGAACAGTaGTCATTACACAGTGTCACAGTTTGCTGTGGCAATCCTTTACCA | + |
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Preference number: 1 (lower is better) Translates to: EIIYTRFLCNCRWEQ*SLHSVTVCCGNPLP Trigger: TGGTAAAGGATTGCCACAGCAAACTGTGACACTGTGTAATGAGCACTGTTCCCAGCGGCAATTACAGAGAAAACGAGTGTAAATTATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| 3UTR CCA 90 bp | TTTCCAGTTGAAATAATTTACACTCGTTTTCTCTGTAATTGCCGCTaGGAACAGTGCTCATTACACAGTGTCACAGTTTGCTGTGGCAAT | + |
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Preference number: 1 (lower is better) Translates to: FPVEIIYTRFLCNCR*EQCSLHSVTVCCGN Trigger: ATTGCCACAGCAAACTGTGACACTGTGTAATGAGCACTGTTCCCAGCGGCAATTACAGAGAAAACGAGTGTAAATTATTTCAACTGGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| 3UTR CCA 90 bp | TCTTTAAAAGTAGAGATGCTGTTCATACGAAAAGGAGAACTGATTTaGGAGGGCACTTTGATTACACGTACCCAAATGACCTGTGTTCTC | + |
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Preference number: 1 (lower is better) Translates to: SLKVEMLFIRKGELI*EGTLITRTQMTCVL Trigger: GAGAACACAGGTCATTTGGGTACGTGTAATCAAAGTGCCCTCCCAAATCAGTTCTCCTTTTCGTATGAACAGCATCTCTACTTTTAAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| 3UTR-3UTR TCA 90 bp | TCTAACCCACGTGGCTGGGGCTACCTGAACCAGCAGGAAGGAGGGGCAGCAGAGCAGGTACACCCTCTCTaGGAGTGGTGGGACAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: SNPRGWGYLNQQEGGAAEQVHPL*EWWDRA Trigger: TGCCCTGTCCCACCACTCTCAGAGAGGGTGTACCTG...CTCTGCTGCCCCTCCTTCCTGCTGGTTCAGGTAGCCCCAGCCACGTGGGTTAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| 3UTR-3UTR TCA 90 bp | TCTAACCCACGTGGCTGGGGCTACCTGAACCAGCAGGAAGGAGGGGCAGCAGAGGACTCAGAGCATGCGTaGCAGGCAGCCAGGCAGTTC | + |
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Preference number: 2 (lower is better) Translates to: SNPRGWGYLNQQEGGAAEDSEHA*QAARQF Trigger: GAACTGCCTGGCTGCCTGTCACGCATGCTCTGAGTC...CTCTGCTGCCCCTCCTTCCTGCTGGTTCAGGTAGCCCCAGCCACGTGGGTTAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| 3UTR-3UTR TCA 90 bp | TTCCCACTTCCAGTAGGGAGGGCCTGTGGTGCATCAGACATACTGTTGAAGGGAGTGGCTGGGGCTACCTaGACCAGCAGGAAGGAGGGG | + |
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Preference number: 2 (lower is better) Translates to: FPLPVGRACGASDILLKGVAGAT*TSRKEG Trigger: CCCCTCCTTCCTGCTGGTTCAGGTAGCCCCAGCCAC...TCCCTTCAACAGTATGTCTGATGCACCACAGGCCCTCCCTACTGGAAGTGGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| 3UTR CAA 90 bp | GGGAGGGCCTGTGGTGCATCAGACATACTGTTGAAGGGACTGGGCTaGACTAGGGCAGCCCGTTTGCACACGCCACCACTTGTTGACTTG | + |
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Preference number: 2 (lower is better) Translates to: GRACGASDILLKGLG*TRAARLHTPPLVDL Trigger: CAAGTCAACAAGTGGTGGCGTGTGCAAACGGGCTGCCCTAGTCAAGCCCAGTCCCTTCAACAGTATGTCTGATGCACCACAGGCCCTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| 3UTR-3UTR CCA 90 bp | GCTAGAGCCTTCTCAGCCTCTCAAGGACTCAGAAATGGCAGCTTGGGGCTAAGAGGTAGCCAGCTGCCATaGCAGGCCAGCACAGGACTC | + |
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Preference number: 2 (lower is better) Translates to: ARAFSASQGLRNGSLGLRGSQLP*QASTGL Trigger: GAGTCCTGTGCTGGCCTGCCATGGCAGCTGGCTACC...TCTTAGCCCCAAGCTGCCATTTCTGAGTCCTTGAGAGGCTGAGAAGGCTCTAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| 3UTR-3UTR CCA 90 bp | TTCCCACTTCCAGTAGGGAGGGCCTGTGGTGCATCAGACATACTGTTGAAGGGAGCCTCCACCAGTGTCTaGGACTGGCTGTGCCCCAGT | + |
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Preference number: 2 (lower is better) Translates to: FPLPVGRACGASDILLKGASTSV*DWLCPS Trigger: ACTGGGGCACAGCCAGTCCCAGACACTGGTGGAGGC...TCCCTTCAACAGTATGTCTGATGCACCACAGGCCCTCCCTACTGGAAGTGGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| 3UTR-3UTR GCA 90 bp | CTTCCAAGGAAGAATGGGTTCTCCCCAGCTCTACCCTCCGGCGTGTTCCCGTCTTGGTGGGACAGGGCATaGTCCATTACAACTTCTCCA | + |
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Preference number: 2 (lower is better) Translates to: LPRKNGFSPALPSGVFPSWWDRA*SITTSP Trigger: TGGAGAAGTTGTAATGGAGCATGCCCTGTCCCACCA...AGACGGGAACACGCCGGAGGGTAGAGCTGGGGAGAACCCATTCTTCCTTGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| 3UTR-3UTR GCA 90 bp | AGCTGGAAATATGCCACAGGCTCCTGCAGGAGGGGCACCAGGATGTGCTCCAAGGATGACAGAGCGCTCTaGACCAAGCCTGCAATTTTC | + |
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Preference number: 2 (lower is better) Translates to: SWKYATGSCRRGTRMCSKDDRAL*TKPAIF Trigger: GAAAATTGCAGGCTTGGTGCAGAGCGCTCTGTCATC...CTTGGAGCACATCCTGGTGCCCCTCCTGCAGGAGCCTGTGGCATATTTCCAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| 3UTR-3UTR GCA 90 bp | GCTAGAGCCTTCTCAGCCTCTCAAGGACTCAGAAATGGCAGCTTGGGGCTAAGAATTCATTCGGTGTGGTaGCACCTCACCCAGGACACA | + |
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Preference number: 2 (lower is better) Translates to: ARAFSASQGLRNGSLGLRIHSVW*HLTQDT Trigger: TGTGTCCTGGGTGAGGTGGCACCACACCGAATGAAT...TCTTAGCCCCAAGCTGCCATTTCTGAGTCCTTGAGAGGCTGAGAAGGCTCTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| 3UTR-3UTR TCA 90 bp | ACAGAAGCAGCAGCCAAGAAGCGAGTACCAGTTGCAGGTGGCGATCCTGTGTACTTTCCTTTTGGACTGTaGCATCCCAGACCTCTGTCA | + |
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Preference number: 2 (lower is better) Translates to: TEAAAKKRVPVAGGDPVYFPFGL*HPRPLS Trigger: TGACAGAGGTCTGGGATGTCACAGTCCAAAAGGAAA...GTACACAGGATCGCCACCTGCAACTGGTACTCGCTTCTTGGCTGCTGCTTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| 3UTR CAA 90 bp | GATACACCACCTGTTAGTTCAAGCCACCAGAACAGAAGCCATCACTaGGCCTTCAGACAGGGGCACGTGTATGTAGCAGACACAGCTGTT | + |
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Preference number: 2 (lower is better) Translates to: DTPPVSSSHQNRSHH*AFRQGHVYVADTAV Trigger: AACAGCTGTGTCTGCTACATACACGTGCCCCTGTCTGAAGGCCAAGTGATGGCTTCTGTTCTGGTGGCTTGAACTAACAGGTGGTGTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| 3UTR-3UTR GCA 90 bp | CTTTACGGTGAAAAGTTTATTAGAAGGGCGTTTATAAGAAGAGGGGACACGGCTGTCTGCCAGCAGCCTTaGCCGCCTTGTGTCCTTCCC | + |
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Preference number: 2 (lower is better) Translates to: LYGEKFIRRAFIRRGDTAVCQQP*PPCVLP Trigger: GGGAAGGACACAAGGCGGGCAAGGCTGCTGGCAGAC...AGCCGTGTCCCCTCTTCTTATAAACGCCCTTCTAATAAACTTTTCACCGTAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| 3UTR-3UTR CCA 90 bp | GCTAGAGCCTTCTCAGCCTCTCAAGGACTCAGAAATGGCAGCTTGGGGCTAAGAAAGGCACTTTCCTTTTaGACTGTGACATCCCAGACC | + |
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Preference number: 2 (lower is better) Translates to: ARAFSASQGLRNGSLGLRKALSF*TVTSQT Trigger: GGTCTGGGATGTCACAGTCCAAAAGGAAAGTGCCTT...TCTTAGCCCCAAGCTGCCATTTCTGAGTCCTTGAGAGGCTGAGAAGGCTCTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| 3UTR-3UTR GCA 90 bp | AAGCGGCAGAATGCTAAACATCAGTTCTGTGTTAACACAAGTAGCTGCAGGGACGGCCACACCCACTGCTaGACTGTCATCTTCTCGATC | + |
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Preference number: 2 (lower is better) Translates to: KRQNAKHQFCVNTSSCRDGHTHC*TVIFSI Trigger: GATCGAGAAGATGACAGTGCAGCAGTGGGTGTGGCC...GTCCCTGCAGCTACTTGTGTTAACACAGAACTGATGTTTAGCATTCTGCCGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| 3UTR-3UTR GCA 90 bp | CTTTACGGTGAAAAGTTTATTAGAAGGGCGTTTATAAGAAGAGGGGACACGGCTGCCCAGCTGGAAATATaGCACAGGCTCCTGCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: LYGEKFIRRAFIRRGDTAAQLEI*HRLLQE Trigger: CTCCTGCAGGAGCCTGTGGCATATTTCCAGCTGGGC...AGCCGTGTCCCCTCTTCTTATAAACGCCCTTCTAATAAACTTTTCACCGTAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| 3UTR CAA 90 bp | TTTCATTTGCCCATGTCAGCCTGGGATGTCTTACCTCCTGGTGAATaGGCTTCTATAACTCTCAGCTTCCAAACCTCAGGGCAAGAAGCA | + |
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Preference number: 2 (lower is better) Translates to: FHLPMSAWDVLPPGE*ASITLSFQTSGQEA Trigger: TGCTTCTTGCCCTGAGGTTTGGAAGCTGAGAGTTATAGAAGCCAATTCACCAGGAGGTAAGACATCCCAGGCTGACATGGGCAAATGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| 3UTR-3UTR CCA 90 bp | CCTGGTGAATTGGCTTCTATAACTCTCAGCTTCCAAACCTCAGGGCAAGAAGCATGGGGTTTTCTTCTGTaGTCTCAGAAACAGGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: PGELASITLSFQTSGQEAWGFLL*SQKQAG Trigger: ACCAGCCTGTTTCTGAGACCACAGAAGAAAACCCCA...TGCTTCTTGCCCTGAGGTTTGGAAGCTGAGAGTTATAGAAGCCAATTCACCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| 3UTR-3UTR CCA 90 bp | ATTGGAGGGTACACTTTCTTCCCCTCTGTAGCAGGACAGGACTTCCATGGGAAATCCATACTCCAGCCATaGAGAAAGGCACTTTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: IGGYTFFPSVAGQDFHGKSILQP*RKALSF Trigger: AAAGGAAAGTGCCTTTCTCCATGGCTGGAGTATGGA...TTTCCCATGGAAGTCCTGTCCTGCTACAGAGGGGAAGAAAGTGTACCCTCCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| 3UTR-3UTR CCA 90 bp | AACAGTGCTCATTACACAGTGTCACAGTTTGCTGTGGCAATCCTTTACCATAGCCCTTCCAAGGAAGAATaGGTTCTCCCCAGCTCTACC | + |
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Preference number: 2 (lower is better) Translates to: NSAHYTVSQFAVAILYHSPSKEE*VLPSST Trigger: GGTAGAGCTGGGGAGAACCCATTCTTCCTTGGAAGG...GCTATGGTAAAGGATTGCCACAGCAAACTGTGACACTGTGTAATGAGCACTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| 3UTR-3UTR GCA 90 bp | TATAAGAAGAGGGGACACGGCTCTTTAACAATGGGGTACAATGCTGTAAGATACACATCAGGGTTGTGGTaGCAGCTCCCAGAGATGCAT | + |
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Preference number: 2 (lower is better) Translates to: YKKRGHGSLTMGYNAVRYTSGLW*QLPEMH Trigger: ATGCATCTCTGGGAGCTGGCACCACAACCCTGATGT...GTATCTTACAGCATTGTACCCCATTGTTAAAGAGCCGTGTCCCCTCTTCTTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| 3UTR-3UTR GCA 90 bp | TTCTCTGTAATTGCCGCTGGGAACAGTGCTCATTACACAGTGTCACAGTTTGCTATAGCCCTTTTCATTTaGCCATGTCAGCCTGGGATG | + |
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Preference number: 2 (lower is better) Translates to: FSVIAAGNSAHYTVSQFAIALFI*PCQPGM Trigger: CATCCCAGGCTGACATGGGCAAATGAAAAGGGCTAT...AGCAAACTGTGACACTGTGTAATGAGCACTGTTCCCAGCGGCAATTACAGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| 3UTR-3UTR CCA 90 bp | CCTGGTGAATTGGCTTCTATAACTCTCAGCTTCCAAACCTCAGGGCAAGAAGCATTGACAAGACCAAGTTaGATGGAGTTCTCTTCCAAG | + |
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Preference number: 2 (lower is better) Translates to: PGELASITLSFQTSGQEALTRPS*MEFSSK Trigger: CTTGGAAGAGAACTCCATCCAACTTGGTCTTGTCAA...TGCTTCTTGCCCTGAGGTTTGGAAGCTGAGAGTTATAGAAGCCAATTCACCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| 3UTR-3UTR CCA 90 bp | AAGCGGCAGAATGCTAAACATCAGTTCTGTGTTAACACAAGTAGCTGCAGGGACTGTGCTCCAAGAGTCTaGGGGCATCAGAAGATTTAT | + |
|
Preference number: 2 (lower is better) Translates to: KRQNAKHQFCVNTSSCRDCAPRV*GHQKIY Trigger: ATAAATCTTCTGATGCCCCCAGACTCTTGGAGCACA...GTCCCTGCAGCTACTTGTGTTAACACAGAACTGATGTTTAGCATTCTGCCGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR-3UTR GCA 90 bp | TATAAGAAGAGGGGACACGGCTCTTTAACAATGGGGTACAATGCTGTAAGATACATGAAGTCAGATGTTTaGCTCTGCTCCAGACAACTC | + |
|
Preference number: 2 (lower is better) Translates to: YKKRGHGSLTMGYNAVRYMKSDV*LCSRQL Trigger: GAGTTGTCTGGAGCAGAGGCAAACATCTGACTTCAT...GTATCTTACAGCATTGTACCCCATTGTTAAAGAGCCGTGTCCCCTCTTCTTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR-3UTR CCA 90 bp | TTGAATGGCTTTAAGGAATTGTTACATAAATACGAAAGCGGCAGAATGCTAAACACAGAAGCCATCACTTaGCCTTCAGACAGGGGCACG | + |
|
Preference number: 2 (lower is better) Translates to: LNGFKELLHKYESGRMLNTEAIT*PSDRGT Trigger: CGTGCCCCTGTCTGAAGGCCAAGTGATGGCTTCTGT...GTTTAGCATTCTGCCGCTTTCGTATTTATGTAACAATTCCTTAAAGCCATTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR-3UTR CCA 90 bp | CTTTACGGTGAAAAGTTTATTAGAAGGGCGTTTATAAGAAGAGGGGACACGGCTAGGACAGGACTTCCATaGGAAATCCATGCAGAAACA | + |
|
Preference number: 2 (lower is better) Translates to: LYGEKFIRRAFIRRGDTARTGLP*EIHAET Trigger: TGTTTCTGCATGGATTTCCCATGGAAGTCCTGTCCT...AGCCGTGTCCCCTCTTCTTATAAACGCCCTTCTAATAAACTTTTCACCGTAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR-3UTR CCA 90 bp | TTGAATGGCTTTAAGGAATTGTTACATAAATACGAAAGCGGCAGAATGCTAAACTGGCTTTCTACCCACTaGGAAGGTGCTGTGAAGGCC | + |
|
Preference number: 2 (lower is better) Translates to: LNGFKELLHKYESGRMLNWLSTH*EGAVKA Trigger: GGCCTTCACAGCACCTTCCCAGTGGGTAGAAAGCCA...GTTTAGCATTCTGCCGCTTTCGTATTTATGTAACAATTCCTTAAAGCCATTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR-3UTR CCA 90 bp | CTTTACGGTGAAAAGTTTATTAGAAGGGCGTTTATAAGAAGAGGGGACACGGCTAGCAGCAAAGGCTTCTaGGATAAAAGATGGCTCCAA | + |
|
Preference number: 2 (lower is better) Translates to: LYGEKFIRRAFIRRGDTASSKGF*DKRWLQ Trigger: TTGGAGCCATCTTTTATCCCAGAAGCCTTTGCTGCT...AGCCGTGTCCCCTCTTCTTATAAACGCCCTTCTAATAAACTTTTCACCGTAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR-3UTR CCA 90 bp | TTGAATGGCTTTAAGGAATTGTTACATAAATACGAAAGCGGCAGAATGCTAAACATCAGCATGCCCAGCTaGAAATATGCCACAGGCTCC | + |
|
Preference number: 2 (lower is better) Translates to: LNGFKELLHKYESGRMLNISMPS*KYATGS Trigger: GGAGCCTGTGGCATATTTCCAGCTGGGCATGCTGAT...GTTTAGCATTCTGCCGCTTTCGTATTTATGTAACAATTCCTTAAAGCCATTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR-3UTR GCA 90 bp | TTGAATGGCTTTAAGGAATTGTTACATAAATACGAAAGCGGCAGAATGCTAAACGTAATGGAACACAAATaGCACACAAAGACAGGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: LNGFKELLHKYESGRMLNVMEHK*HTKTGG Trigger: TCCTCCTGTCTTTGTGTGGCATTTGTGTTCCATTAC...GTTTAGCATTCTGCCGCTTTCGTATTTATGTAACAATTCCTTAAAGCCATTCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR CCA 72 bp | TCTGCCTGGGGGTCGGTGTCAGTGGGCACCCAGGGCTaGAACAGCACATGTAGTCAGGCCACACCCACTGCT | + |
|
Preference number: 3 (lower is better) Translates to: SAWGSVSVGTQG*NSTCSQATPTA Trigger: AGCAGTGGGTGTGGCCTGACTACATGTGCTGTTCCAGCCCTGGGTGCCCACTGACACCGACCCCCAGGCAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR GCA 72 bp | AGCCAACTTCTCAGGAGTGCTGAAGACAAAGGCCTCTaGCTGGGGGTCGGTGTCAGTGGGCACCCAGGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: SQLLRSAEDKGL*LGVGVSGHPGL Trigger: CAGCCCTGGGTGCCCACTGACACCGACCCCCAGGCAGAGGCCTTTGTCTTCAGCACTCCTGAGAAGTTGGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR GCA 72 bp | CACACTCAGGTCAGTGGAGAAGTCTGCCAGCAGCCTTaGCCGCCTTGTGTCCTTCCCAAGAGAGGCCCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: HTQVSGEVCQQP*PPCVLPKRGPA Trigger: AGCAGGGCCTCTCTTGGGAAGGACACAAGGCGGGCAAGGCTGCTGGCAGACTTCTCCACTGACCTGAGTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR CCA 72 bp | AACTTCTCAGGAGTGCTGAAGACAAAGGCCTCTGCCTaGGGGTCGGTGTCAGTGGGCACCCAGGGCTGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: NFSGVLKTKASA*GSVSVGTQGWN Trigger: GTTCCAGCCCTGGGTGCCCACTGACACCGACCCCCAGGCAGAGGCCTTTGTCTTCAGCACTCCTGAGAAGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR TCA 72 bp | CTCCCACTGTGTGCCTCCAGAAGCCGCCATCTGCTCTaGGCAGTGCCGGTTCCCTCTACTTTCCAGTTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: LPLCASRSRHLL*AVPVPSTFQLQ Trigger: CTGCAACTGGAAAGTAGAGGGAACCGGCACTGCTCAGAGCAGATGGCGGCTTCTGGAGGCACACAGTGGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR GCA 72 bp | GGTGCCAGCTCCCAGAGATGCATTCATTCGGTGTGGTaGCACCTCACCCAGGACACATACTCCACGAGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: GASSQRCIHSVW*HLTQDTYSTSA Trigger: GGCACTCGTGGAGTATGTGTCCTGGGTGAGGTGGCACCACACCGAATGAATGCATCTCTGGGAGCTGGCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR CCA 72 bp | GGCATCTGTGTCTCAAGGAGGATCAGCATGCCCAGCTaGAAATATGCCACAGGCTCCTGCAGGAGGGGCACC | + |
|
Preference number: 3 (lower is better) Translates to: GICVSRRISMPS*KYATGSCRRGT Trigger: GGTGCCCCTCCTGCAGGAGCCTGTGGCATATTTCCAGCTGGGCATGCTGATCCTCCTTGAGACACAGATGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR-3UTR CAA 90 bp | TTCCCACTTCCAGTAGGGAGGGCCTGTGGTGCATCAGACATACTGTTGAAGGGAGCAGCCTTGCCCGCCTaGTGTCCTTCCCAAGAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: FPLPVGRACGASDILLKGAALPA*CPSQER Trigger: CCTCTCTTGGGAAGGACACAAGGCGGGCAAGGCTGC...TCCCTTCAACAGTATGTCTGATGCACCACAGGCCCTCCCTACTGGAAGTGGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR TCA 72 bp | AGCAGAGCGTTGGTGTGTTCTGACTCAGAGCATGCGTaGCAGGCAGCCAGGCAGTTCCGAGGACTCGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: SRALVCSDSEHA*QAARQFRGLVC Trigger: ACACACGAGTCCTCGGAACTGCCTGGCTGCCTGTCACGCATGCTCTGAGTCAGAACACACCAACGCTCTGCT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR GCA 72 bp | ATCAGCATGCCCAGCTGGAAATATGCCACAGGCTCCTaGAGGAGGGGCACCAGGATGTGCTCCAAGAGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: ISMPSWKYATGS*RRGTRMCSKSL Trigger: CAGACTCTTGGAGCACATCCTGGTGCCCCTCCTGCAGGAGCCTGTGGCATATTTCCAGCTGGGCATGCTGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR GCA 72 bp | TGTCTCAAGGAGGATCAGCATGCCCAGCTGGAAATATaGCACAGGCTCCTGCAGGAGGGGCACCAGGATGTG | + |
|
Preference number: 3 (lower is better) Translates to: CLKEDQHAQLEI*HRLLQEGHQDV Trigger: CACATCCTGGTGCCCCTCCTGCAGGAGCCTGTGGCATATTTCCAGCTGGGCATGCTGATCCTCCTTGAGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR GCA 72 bp | GTGTACTCCCACTGTGTGCCTCCAGAAGCCGCCATCTaGTCTGAGCAGTGCCGGTTCCCTCTACTTTCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: VYSHCVPPEAAI*SEQCRFPLLSS Trigger: ACTGGAAAGTAGAGGGAACCGGCACTGCTCAGAGCAGATGGCGGCTTCTGGAGGCACACAGTGGGAGTACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR GCA 72 bp | GTCACTGCAGCCTCCACCAGTGTCTGGGACTGGCTGTaGCCCAGTTCTTCCAAGTCATTGTCCTCAGGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: VTAASTSVWDWL*PSSSKSLSSGE Trigger: CTCTCCTGAGGACAATGACTTGGAAGAACTGGGGCACAGCCAGTCCCAGACACTGGTGGAGGCTGCAGTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR TCA 72 bp | AGGAGAAGGGGTAAAGAGCCAACTTCTCAGGAGTGCTaGAGACAAAGGCCTCTGCCTGGGGGTCGGTGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: RRRGKEPTSQEC*RQRPLPGGRCQ Trigger: CTGACACCGACCCCCAGGCAGAGGCCTTTGTCTTCAGCACTCCTGAGAAGTTGGCTCTTTACCCCTTCTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR CCA 72 bp | TGTGGTGCCAGCTCCCAGAGATGCATTCATTCGGTGTaGTGCCACCTCACCCAGGACACATACTCCACGAGT | + |
|
Preference number: 3 (lower is better) Translates to: CGASSQRCIHSV*CHLTQDTYSTS Trigger: ACTCGTGGAGTATGTGTCCTGGGTGAGGTGGCACCACACCGAATGAATGCATCTCTGGGAGCTGGCACCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR GCA 72 bp | TATGCCACAGGCTCCTGCAGGAGGGGCACCAGGATGTaGTCCAAGAGTCTGGGGGCATCAGAAGATTTATCA | + |
|
Preference number: 3 (lower is better) Translates to: YATGSCRRGTRM*SKSLGASEDLS Trigger: TGATAAATCTTCTGATGCCCCCAGACTCTTGGAGCACATCCTGGTGCCCCTCCTGCAGGAGCCTGTGGCATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR GCA 72 bp | CTCACACAGGCATCTGTGTCTCAAGGAGGATCAGCATaGCCAGCTGGAAATATGCCACAGGCTCCTGCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LTQASVSQGGSA*PAGNMPQAPAG Trigger: TCCTGCAGGAGCCTGTGGCATATTTCCAGCTGGGCATGCTGATCCTCCTTGAGACACAGATGCCTGTGTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR GCA 72 bp | TGTGTGCCTCCAGAAGCCGCCATCTGCTCTGAGCAGTaGCGGTTCCCTCTACTTTCCAGTTGCAGCAGAATA | + |
|
Preference number: 3 (lower is better) Translates to: CVPPEAAICSEQ*RFPLLSSCSRI Trigger: TATTCTGCTGCAACTGGAAAGTAGAGGGAACCGGCACTGCTCAGAGCAGATGGCGGCTTCTGGAGGCACACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR CCA 72 bp | CCTGCAGGAGGGGCACCAGGATGTGCTCCAAGAGTCTaGGGGCATCAGAAGATTTATCACATTGGAGGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: PAGGAPGCAPRV*GHQKIYHIGGY Trigger: GTACCCTCCAATGTGATAAATCTTCTGATGCCCCCAGACTCTTGGAGCACATCCTGGTGCCCCTCCTGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR CCA 72 bp | ACCATGAATGCTTCCCTAGGAGCCACAGCAGAGCGTTaGTGTGTTCTGACTCAGAGCATGCGTGACAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: TMNASLGATAER*CVLTQSMRDRQ Trigger: CTGCCTGTCACGCATGCTCTGAGTCAGAACACACCAACGCTCTGCTGTGGCTCCTAGGGAAGCATTCATGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR-3UTR CAA 90 bp | TGGCTCCAATTTCCATTTGAAGTTCCCACTTCCAGTAGGGAGGGCCTGTGGTGCTGCACACGCCACCACTaGTTGACTTGTTGGCCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: WLQFPFEVPTSSREGLWCCTRHH*LTCWPS Trigger: ACTGGGCCAACAAGTCAACAAGTGGTGGCGTGTGCA...GCACCACAGGCCCTCCCTACTGGAAGTGGGAACTTCAAATGGAAATTGGAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR TCA 72 bp | CATGTTCCCCCGTCTGCAATGCCACATCTTCATGGTTaGCCCACATCCTGGTGTGTGGCTTTCTACCCACTG | + |
|
Preference number: 3 (lower is better) Translates to: HVPPSAMPHLHG*PTSWCVAFYPL Trigger: CAGTGGGTAGAAAGCCACACACCAGGATGTGGGTCAACCATGAAGATGTGGCATTGCAGACGGGGGAACATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR GCA 72 bp | ACATCCTGGTGTGTGGCTTTCTACCCACTGGGAAGGTaGTGTGAAGGCCGTTACTTAAAGGGGCCGGTAATG | + |
|
Preference number: 3 (lower is better) Translates to: TSWCVAFYPLGR*CEGRYLKGPVM Trigger: CATTACCGGCCCCTTTAAGTAACGGCCTTCACAGCACCTTCCCAGTGGGTAGAAAGCCACACACCAGGATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR GCA 72 bp | CTCAGCCTCCTAAACAAGAGTCCACACCAGCCCACTTaGCCTGGCAGCAGCAAAGGCTTCTGGGATAAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: LSLLNKSPHQPT*PGSSKGFWDKR Trigger: TCTTTTATCCCAGAAGCCTTTGCTGCTGCCAGGGCAAGTGGGCTGGTGTGGACTCTTGTTTAGGAGGCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR-3UTR CAA 90 bp | GCGGATCCTTCCAAGGAAGAATGGGTTCTCCCCAGCTCTACCCTCCGGCGTGTTTGGAATCGGTGTTCTTaGACAAGACCAAGTTGGATG | + |
|
Preference number: 3 (lower is better) Translates to: ADPSKEEWVLPSSTLRRVWNRCS*TRPSWM Trigger: CATCCAACTTGGTCTTGTCAAAGAACACCGATTCCA...AACACGCCGGAGGGTAGAGCTGGGGAGAACCCATTCTTCCTTGGAAGGATCCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR TCA 72 bp | TCTCCTACAGCATTCTCCAGCAACTGGCCAATAACATaGAGGGGTGTACTCCCACTGTGTGCCTCCAGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: SPTAFSSNWPIT*RGVLPLCASRS Trigger: GCTTCTGGAGGCACACAGTGGGAGTACACCCCTTCATGTTATTGGCCAGTTGCTGGAGAATGCTGTAGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR CCA 72 bp | AGAAGCAGCAGCCAAGAAGCGAGTACCAGTTGCAGGTaGCGATCCTGTGTACCCTGTTCTAAAACAGCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: RSSSQEASTSCR*RSCVPCSKTAK Trigger: CTTGGCTGTTTTAGAACAGGGTACACAGGATCGCCACCTGCAACTGGTACTCGCTTCTTGGCTGCTGCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR CCA 72 bp | CTTTCTTCAAAATGCCAGGTATCTCTACAGTTGGTCTaGAAGGTAGCCAGCTGCCATGGCAGGCCAGCACAG | + |
|
Preference number: 3 (lower is better) Translates to: LSSKCQVSLQLV*KVASCHGRPAQ Trigger: CTGTGCTGGCCTGCCATGGCAGCTGGCTACCTTCCAGACCAACTGTAGAGATACCTGGCATTTTGAAGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR-3UTR CAA 90 bp | ATTGGAGGGTACACTTTCTTCCCCTCTGTAGCAGGACAGGACTTCCATGGGAAACAGTGGCAGGGTCCATaGTGGTTTTCCAGCCAACAT | + |
|
Preference number: 3 (lower is better) Translates to: IGGYTFFPSVAGQDFHGKQWQGP*WFSSQH Trigger: ATGTTGGCTGGAAAACCACAATGGACCCTGCCACTG...TTTCCCATGGAAGTCCTGTCCTGCTACAGAGGGGAAGAAAGTGTACCCTCCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR GCA 72 bp | CACAACAGAAGCAGCAGCCAAGAAGCGAGTACCAGTTaGAGGTGGCGATCCTGTGTACCCTGTTCTAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: HNRSSSQEASTS*RWRSCVPCSKT Trigger: TGTTTTAGAACAGGGTACACAGGATCGCCACCTGCAACTGGTACTCGCTTCTTGGCTGCTGCTTCTGTTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR GCA 72 bp | AATGGCAGCTTGGGGCTAAGAATGAAGTCAGATGTTTaGCTCTGCTCCAGACAACTCAGGCACATGCATGAC | + |
|
Preference number: 3 (lower is better) Translates to: NGSLGLRMKSDV*LCSRQLRHMHD Trigger: GTCATGCATGTGCCTGAGTTGTCTGGAGCAGAGGCAAACATCTGACTTCATTCTTAGCCCCAAGCTGCCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR CCA 72 bp | AAACCTCAGGGCAAGAAGCAGTGGCAGGGTCCATTGTaGTTTTCCAGCCAACATACGTACCCAGGATTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: KPQGKKQWQGPL*FSSQHTYPGLF Trigger: AAACAATCCTGGGTACGTATGTTGGCTGGAAAACCACAATGGACCCTGCCACTGCTTCTTGCCCTGAGGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR CCA 72 bp | CACTTTCTTCCCCTCTGTAGCAGGACAGGACTTCCATaGGAAATCCATGCAGAAACATGGGCTCGTCTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: HFLPLCSRTGLP*EIHAETWARLF Trigger: GAAAAGACGAGCCCATGTTTCTGCATGGATTTCCCATGGAAGTCCTGTCCTGCTACAGAGGGGAAGAAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR TCA 72 bp | TTTGCCCATGTCAGCCTGGGATGTCTTACCTCCTGGTaGATTGGCTTCTATAACTCTCAGCTTCCAAACCTC | + |
|
Preference number: 3 (lower is better) Translates to: FAHVSLGCLTSW*IGFYNSQLPNL Trigger: GAGGTTTGGAAGCTGAGAGTTATAGAAGCCAATTCACCAGGAGGTAAGACATCCCAGGCTGACATGGGCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR CCA 72 bp | TCCAAGAGTCTGGGGGCATCAGAAGATTTATCACATTaGAGGGTACACTTTCTTCCCCTCTGTAGCAGGACA | + |
|
Preference number: 3 (lower is better) Translates to: SKSLGASEDLSH*RVHFLPLCSRT Trigger: TGTCCTGCTACAGAGGGGAAGAAAGTGTACCCTCCAATGTGATAAATCTTCTGATGCCCCCAGACTCTTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR-3UTR CAA 90 bp | TCTGAGCAGTGCCGGTTCCCTCTACTTTCCAGTTGCAGCAGAATAGACTGTCCCAGAAGATTTATCACATaGGAGGGTACACTTTCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: SEQCRFPLLSSCSRIDCPRRFIT*EGTLSS Trigger: GGAAGAAAGTGTACCCTCCAATGTGATAAATCTTCT...GGGACAGTCTATTCTGCTGCAACTGGAAAGTAGAGGGAACCGGCACTGCTCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR TCA 72 bp | TTTACAAAGACACTAAAGGCCTGGCTGGCTAAGGAGTaGCAAGAACCTCAGCCTCCTAAACAAGAGTCCACA | + |
|
Preference number: 3 (lower is better) Translates to: FTKTLKAWLAKE*QEPQPPKQEST Trigger: TGTGGACTCTTGTTTAGGAGGCTGAGGTTCTTGTCACTCCTTAGCCAGCCAGGCCTTTAGTGTCTTTGTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR TCA 72 bp | TGTTTGCCTCTGCTCCAGACAACTCAGGCACATGCATaGCTGCACAGGCTACTTAAAGAAAACTTTTCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: CLPLLQTTQAHA*LHRLLKENFSV Trigger: CACAGAAAAGTTTTCTTTAAGTAGCCTGTGCAGTCATGCATGTGCCTGAGTTGTCTGGAGCAGAGGCAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR GCA 72 bp | TACACTCGTTTTCTCTGTAATTGCCGCTGGGAACAGTaGTCATTACACAGTGTCACAGTTTGCTGTGGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: YTRFLCNCRWEQ*SLHSVTVCCGN Trigger: ATTGCCACAGCAAACTGTGACACTGTGTAATGAGCACTGTTCCCAGCGGCAATTACAGAGAAAACGAGTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR CCA 72 bp | GTAGAGATGCTGTTCATACGAAAAGGAGAACTGATTTaGGAGGGCACTTTGATTACACGTACCCAAATGACC | + |
|
Preference number: 3 (lower is better) Translates to: VEMLFIRKGELI*EGTLITRTQMT Trigger: GGTCATTTGGGTACGTGTAATCAAAGTGCCCTCCCAAATCAGTTCTCCTTTTCGTATGAACAGCATCTCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR CCA 72 bp | AATTTTAATAGCCCTTTTCATTTGCCCATGTCAGCCTaGGATGTCTTACCTCCTGGTGAATTGGCTTCTATA | + |
|
Preference number: 3 (lower is better) Translates to: NFNSPFHLPMSA*DVLPPGELASI Trigger: TATAGAAGCCAATTCACCAGGAGGTAAGACATCCCAGGCTGACATGGGCAAATGAAAAGGGCTATTAAAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR CCA 72 bp | GAAATAATTTACACTCGTTTTCTCTGTAATTGCCGCTaGGAACAGTGCTCATTACACAGTGTCACAGTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: EIIYTRFLCNCR*EQCSLHSVTVC Trigger: GCAAACTGTGACACTGTGTAATGAGCACTGTTCCCAGCGGCAATTACAGAGAAAACGAGTGTAAATTATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR-3UTR CAA 90 bp | TTGAATGGCTTTAAGGAATTGTTACATAAATACGAAAGCGGCAGAATGCTAAACAAAGGCACTTTCCTTTaGGACTGTGACATCCCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: LNGFKELLHKYESGRMLNKGTFL*DCDIPD Trigger: GTCTGGGATGTCACAGTCCAAAAGGAAAGTGCCTTT...GTTTAGCATTCTGCCGCTTTCGTATTTATGTAACAATTCCTTAAAGCCATTCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR CAA 72 bp | GGTCAGTGGAGAAGTCTGCCAGCAGCCTTGCCCGCCTaGTGTCCTTCCCAAGAGAGGCCCTGCTCTCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GQWRSLPAALPA*CPSQERPCSPV Trigger: GACTGGAGAGCAGGGCCTCTCTTGGGAAGGACACAAGGCGGGCAAGGCTGCTGGCAGACTTCTCCACTGACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR CAA 72 bp | GCACACTCAGGTCAGTGGAGAAGTCTGCCAGCAGCCTaGCCCGCCTTGTGTCCTTCCCAAGAGAGGCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: AHSGQWRSLPAA*PALCPSQERPC Trigger: GCAGGGCCTCTCTTGGGAAGGACACAAGGCGGGCAAGGCTGCTGGCAGACTTCTCCACTGACCTGAGTGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| CDS-3UTR GCA 90 bp | GACCTTCAGCGGATCCTTCCAAGGAAGAATGGGTTCTCCCCAGCTCTACCCTCCAGCCTGGTGGGATCTTaGAGACAGTGGCCGGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: DLQRILPRKNGFSPALPSSLVGS*RQWPGA Trigger: GGCACCCGGCCACTGTCTGCAAGATCCCACCAGGCT...GGAGGGTAGAGCTGGGGAGAACCCATTCTTCCTTGGAAGGATCCGCTGAAGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| CDS-3UTR CCA 90 bp | AGCTGGAAATATGCCACAGGCTCCTGCAGGAGGGGCACCAGGATGTGCTCCAAGGCTGTAGTCATCCAGTaGGGGGAACTCGGCCGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SWKYATGSCRRGTRMCSKAVVIQ*GELGRD Trigger: ATCCCGGCCGAGTTCCCCCCACTGGATGACTACAGC...CTTGGAGCACATCCTGGTGCCCCTCCTGCAGGAGCCTGTGGCATATTTCCAGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| CDS-3UTR TCA 90 bp | GCGGATCCTTCCAAGGAAGAATGGGTTCTCCCCAGCTCTACCCTCCGGCGTGTTCCTCAAAGCCCTGGTTaGCAGACTGAGCTAGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ADPSKEEWVLPSSTLRRVPQSPG*QTELGG Trigger: CCCTCCTAGCTCAGTCTGTCAACCAGGGCTTTGAGG...AACACGCCGGAGGGTAGAGCTGGGGAGAACCCATTCTTCCTTGGAAGGATCCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| CDS-3UTR CCA 90 bp | CTTCCAAGGAAGAATGGGTTCTCCCCAGCTCTACCCTCCGGCGTGTTCCCGTCTGCTCGTAGTAGGAGATaGAGCACCAGAAGGCCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LPRKNGFSPALPSGVFPSARSRR*STRRPA Trigger: AGCCGGCCTTCTGGTGCTCCATCTCCTACTACGAGC...AGACGGGAACACGCCGGAGGGTAGAGCTGGGGAGAACCCATTCTTCCTTGGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| CDS-3UTR GCA 90 bp | CAAGGAAGAATGGGTTCTCCCCAGCTCTACCCTCCGGCGTGTTCCCGTCTCTCTTACGGATGGTGCACATaGGCGTCAGCTGGTAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: QGRMGSPQLYPPACSRLSYGWCT*ASAGRQ Trigger: CTGTCTACCAGCTGACGCGCATGTGCACCATCCGTA...AGAGAGACGGGAACACGCCGGAGGGTAGAGCTGGGGAGAACCCATTCTTCCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| CDS-3UTR TCA 90 bp | AGCTGGAAATATGCCACAGGCTCCTGCAGGAGGGGCACCAGGATGTGCTCCAAGACTGCCCCGTCTTCTTaGGCTTCTTCACCAAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SWKYATGSCRRGTRMCSKTAPSS*ASSPSS Trigger: AGAGCTTGGTGAAGAAGCTCAAGAAGACGGGGCAGT...CTTGGAGCACATCCTGGTGCCCCTCCTGCAGGAGCCTGTGGCATATTTCCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| CDS-3UTR TCA 90 bp | GCGGATCCTTCCAAGGAAGAATGGGTTCTCCCCAGCTCTACCCTCCGGCGTGTTAGTTGGAGGGGTCAGTaGAGCCATCTACTGTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: ADPSKEEWVLPSSTLRRVSWRGQ*SHLLSW Trigger: CCATGACAGTAGATGGCTTCACTGACCCCTCCAACT...AACACGCCGGAGGGTAGAGCTGGGGAGAACCCATTCTTCCTTGGAAGGATCCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| CDS-3UTR GCA 90 bp | TGGCTCCAATTTCCATTTGAAGTTCCCACTTCCAGTAGGGAGGGCCTGTGGTGCCACCACTTCTCCTCCTaGCCGTTCTGCTCGCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: WLQFPFEVPTSSREGLWCHHFSS*PFCSPF Trigger: GAAGGGCGAGCAGAACGGGCAGGAGGAGAAGTGGTG...GCACCACAGGCCCTCCCTACTGGAAGTGGGAACTTCAAATGGAAATTGGAGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| CDS-3UTR GCA 90 bp | TGGAAATATGCCACAGGCTCCTGCAGGAGGGGCACCAGGATGTGCTCCAAGAGTTCCAGCTCGTCCAACTaGCCCGTCTTCTTGAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: WKYATGSCRRGTRMCSKSSSSSN*PVFLSF Trigger: GAAGCTCAAGAAGACGGGGCAGTTGGACGAGCTGGA...ACTCTTGGAGCACATCCTGGTGCCCCTCCTGCAGGAGCCTGTGGCATATTTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| CDS-3UTR CCA 90 bp | GCGGATCCTTCCAAGGAAGAATGGGTTCTCCCCAGCTCTACCCTCCGGCGTGTTTCTGGAATATTGCTCTaGGGCTCAATGCCAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ADPSKEEWVLPSSTLRRVSGILL*GSMPAG Trigger: CCCTGCTGGCATTGAGCCCCAGAGCAATATTCCAGA...AACACGCCGGAGGGTAGAGCTGGGGAGAACCCATTCTTCCTTGGAAGGATCCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| CDS-3UTR TCA 90 bp | AACAGAAGCAGCAGCCAAGAAGCGAGTACCAGTTGCAGGTGGCGATCCTGTGTATCACGTTCTGCGTGGTaGTGGCCTTCTCCAGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: NRSSSQEASTSCRWRSCVSRSAW*WPSPAR Trigger: ACGAGCTGGAGAAGGCCATCACCACGCAGAACGTGA...TACACAGGATCGCCACCTGCAACTGGTACTCGCTTCTTGGCTGCTGCTTCTGTT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| CDS-3UTR TCA 90 bp | TGGCTCCAATTTCCATTTGAAGTTCCCACTTCCAGTAGGGAGGGCCTGTGGTGCCTGCTCCCCAGCCTTTaGCGAAGCTCATACGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: WLQFPFEVPTSSREGLWCLLPSL*RSSYGW Trigger: CCATCCGTATGAGCTTCGTCAAAGGCTGGGGAGCAG...GCACCACAGGCCCTCCCTACTGGAAGTGGGAACTTCAAATGGAAATTGGAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| CDS-3UTR CCA 90 bp | CTTCCAAGGAAGAATGGGTTCTCCCCAGCTCTACCCTCCGGCGTGTTCCCGTCTCAAGTTATTGTGTGCTaGGGACATCGGATTCGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LPRKNGFSPALPSGVFPSQVIVC*GHRIRG Trigger: TCCCCGAATCCGATGTCCCCAGCACACAATAACTTG...AGACGGGAACACGCCGGAGGGTAGAGCTGGGGAGAACCCATTCTTCCTTGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR CAA 72 bp | TGTGGTGCATCAGACATACTGTTGAAGGGACTGGGCTaGACTAGGGCAGCCCGTTTGCACACGCCACCACTT | + |
|
Preference number: 4 (lower is better) Translates to: CGASDILLKGLG*TRAARLHTPPL Trigger: AAGTGGTGGCGTGTGCAAACGGGCTGCCCTAGTCAAGCCCAGTCCCTTCAACAGTATGTCTGATGCACCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| CDS-3UTR TCA 90 bp | CTCCAATTTCCATTTGAAGTTCCCACTTCCAGTAGGGAGGGCCTGTGGTGCATCTGTCATGGATGGCTGTaGGGCGTGGAATGTCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LQFPFEVPTSSREGLWCICHGWL*GVECLP Trigger: GGGGAGACATTCCACGCCTCACAGCCATCCATGACA...GATGCACCACAGGCCCTCCCTACTGGAAGTGGGAACTTCAAATGGAAATTGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| CDS-3UTR TCA 90 bp | TGGCTCCAATTTCCATTTGAAGTTCCCACTTCCAGTAGGGAGGGCCTGTGGTGCCCCTGGTTGACAGACTaGGCTAGGAGGGCAGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: WLQFPFEVPTSSREGLWCPWLTD*ARRAAN Trigger: ATTTGCTGCCCTCCTAGCTCAGTCTGTCAACCAGGG...GCACCACAGGCCCTCCCTACTGGAAGTGGGAACTTCAAATGGAAATTGGAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| CDS-3UTR GCA 90 bp | AACAGAAGCAGCAGCCAAGAAGCGAGTACCAGTTGCAGGTGGCGATCCTGTGTAAGCCATAGCGCTGGTTaGAGTTGGGAGACTGGACGA | + |
|
Preference number: 4 (lower is better) Translates to: NRSSSQEASTSCRWRSCVSHSAG*SWETGR Trigger: TCGTCCAGTCTCCCAACTGCAACCAGCGCTATGGCT...TACACAGGATCGCCACCTGCAACTGGTACTCGCTTCTTGGCTGCTGCTTCTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| CDS-3UTR GCA 90 bp | GGGTTCAGAATTGTATCAACGGAGACTCACACAGGCATCTGTGTCTCAAGGAGGCACTGGAACAGCGGATaGTCGGGGAACCCATCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GFRIVSTETHTGICVSRRHWNSG*SGNPSG Trigger: CCCAGATGGGTTCCCCGAGCATCCGCTGTTCCAGTG...CCTCCTTGAGACACAGATGCCTGTGTGAGTCTCCGTTGATACAATTCTGAACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| CDS-3UTR GCA 90 bp | TCTGAGCAGTGCCGGTTCCCTCTACTTTCCAGTTGCAGCAGAATAGACTGTCCCTTGGTGTTCACGTTCTaGGTGGTGATGGCCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SEQCRFPLLSSCSRIDCPLVFTF*VVMAFS Trigger: GGAGAAGGCCATCACCACGCAGAACGTGAACACCAA...GGGACAGTCTATTCTGCTGCAACTGGAAAGTAGAGGGAACCGGCACTGCTCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| CDS-3UTR GCA 90 bp | CACTTGGCCTTCAGACAGGGGCACGTGTATGTAGCAGACACAGCTGTTCATAAATTCCGATGGGACACCTaGAGCCGACCATCCAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: HLAFRQGHVYVADTAVHKFRWDT*SRPSSD Trigger: GTCACTGGATGGTCGGCTGCAGGTGTCCCATCGGAA...TTTATGAACAGCTGTGTCTGCTACATACACGTGCCCCTGTCTGAAGGCCAAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| CDS-3UTR GCA 90 bp | TTCCCACTTCCAGTAGGGAGGGCCTGTGGTGCATCAGACATACTGTTGAAGGGACTGTCTCCTGTACTCTaGTCCCCAGCCTTTGACGAA | + |
|
Preference number: 4 (lower is better) Translates to: FPLPVGRACGASDILLKGLSPVL*SPAFDE Trigger: TTCGTCAAAGGCTGGGGAGCAGAGTACAGGAGACAG...TCCCTTCAACAGTATGTCTGATGCACCACAGGCCCTCCCTACTGGAAGTGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| CDS-3UTR CCA 90 bp | ATTGGAGGGTACACTTTCTTCCCCTCTGTAGCAGGACAGGACTTCCATGGGAAACAGGTTGCAGCCTGGTaGGATCTTGCAGACAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: IGGYTFFPSVAGQDFHGKQVAAW*DLADSG Trigger: GCCACTGTCTGCAAGATCCCACCAGGCTGCAACCTG...TTTCCCATGGAAGTCCTGTCCTGCTACAGAGGGGAAGAAAGTGTACCCTCCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR CAA 72 bp | CCTGTTAGTTCAAGCCACCAGAACAGAAGCCATCACTaGGCCTTCAGACAGGGGCACGTGTATGTAGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: PVSSSHQNRSHH*AFRQGHVYVAD Trigger: GTCTGCTACATACACGTGCCCCTGTCTGAAGGCCAAGTGATGGCTTCTGTTCTGGTGGCTTGAACTAACAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR CAA 72 bp | TCCAAACCTCAGGGCAAGAAGCAGTGGCAGGGTCCATaGTGGTTTTCCAGCCAACATACGTACCCAGGATTG | + |
|
Preference number: 4 (lower is better) Translates to: SKPQGKKQWQGP*WFSSQHTYPGL Trigger: CAATCCTGGGTACGTATGTTGGCTGGAAAACCACAATGGACCCTGCCACTGCTTCTTGCCCTGAGGTTTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| CDS-3UTR GCA 90 bp | TTCCCACTTCCAGTAGGGAGGGCCTGTGGTGCATCAGACATACTGTTGAAGGGAGTCCAAGTTATTGTGTaGTGGGGACATCGGATTCGG | + |
|
Preference number: 4 (lower is better) Translates to: FPLPVGRACGASDILLKGVQVIV*WGHRIR Trigger: CCGAATCCGATGTCCCCAGCACACAATAACTTGGAC...TCCCTTCAACAGTATGTCTGATGCACCACAGGCCCTCCCTACTGGAAGTGGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| CDS-3UTR GCA 90 bp | ACAGAAGCAGCAGCCAAGAAGCGAGTACCAGTTGCAGGTGGCGATCCTGTGTACTGTAAGTTCCACGGCTaGATTCCGGTTGACATTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TEAAAKKRVPVAGGDPVYCKFHG*IPVDIG Trigger: TCCAATGTCAACCGGAATGCAGCCGTGGAACTTACA...GTACACAGGATCGCCACCTGCAACTGGTACTCGCTTCTTGGCTGCTGCTTCTGT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| CDS-3UTR GCA 90 bp | CAGGACAGGACTTCCATGGGAAATCCATGCAGAAACATGGGCTCGTCTTTTCACGAGAACCTGCGTCCATaGTGTGGTTCATCTGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QDRTSMGNPCRNMGSSFHENLRP*CGSSGG Trigger: ACCACCAGATGAACCACAGCATGGACGCAGGTTCTC...GTGAAAAGACGAGCCCATGTTTCTGCATGGATTTCCCATGGAAGTCCTGTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| CDS-3UTR GCA 90 bp | TTCTCTGTAATTGCCGCTGGGAACAGTGCTCATTACACAGTGTCACAGTTTGCTCAATCCAGCAGGGGGTaGTGGTCACTGTCTGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FSVIAAGNSAHYTVSQFAQSSRG*WSLSVS Trigger: GGAGACAGACAGTGACCAGCACCCCCTGCTGGATTG...AGCAAACTGTGACACTGTGTAATGAGCACTGTTCCCAGCGGCAATTACAGAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| CDS-3UTR CCA 90 bp | GGGTTCAGAATTGTATCAACGGAGACTCACACAGGCATCTGTGTCTCAAGGAGGAGGAGGTGGGGTTTCTaGAATATTGCTCTGGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GFRIVSTETHTGICVSRRRRWGF*NIALGL Trigger: GAGCCCCAGAGCAATATTCCAGAAACCCCACCTCCT...CCTCCTTGAGACACAGATGCCTGTGTGAGTCTCCGTTGATACAATTCTGAACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| CDS-3UTR CCA 90 bp | CTCCAATTTCCATTTGAAGTTCCCACTTCCAGTAGGGAGGGCCTGTGGTGCATCCAGGTAGCCAGGAGGTaGGGTTTCTGGAATATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LQFPFEVPTSSREGLWCIQVARR*GFWNIA Trigger: AGCAATATTCCAGAAACCCCACCTCCTGGCTACCTG...GATGCACCACAGGCCCTCCCTACTGGAAGTGGGAACTTCAAATGGAAATTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| CDS-3UTR CCA 90 bp | AACAGAAGCAGCAGCCAAGAAGCGAGTACCAGTTGCAGGTGGCGATCCTGTGTAATGCTGTGGTTCATCTaGTGGTCACTGGTTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NRSSSQEASTSCRWRSCVMLWFI*WSLVSP Trigger: TGGAGAAACCAGTGACCACCAGATGAACCACAGCAT...TACACAGGATCGCCACCTGCAACTGGTACTCGCTTCTTGGCTGCTGCTTCTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| CDS-3UTR CCA 90 bp | CCTGGTGAATTGGCTTCTATAACTCTCAGCTTCCAAACCTCAGGGCAAGAAGCACCTGCGTCCATGCTGTaGTTCATCTGGTGGTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: PGELASITLSFQTSGQEAPASML*FIWWSL Trigger: CAGTGACCACCAGATGAACCACAGCATGGACGCAGG...TGCTTCTTGCCCTGAGGTTTGGAAGCTGAGAGTTATAGAAGCCAATTCACCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR CAA 72 bp | CCCATGTCAGCCTGGGATGTCTTACCTCCTGGTGAATaGGCTTCTATAACTCTCAGCTTCCAAACCTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PMSAWDVLPPGE*ASITLSFQTSG Trigger: CCCTGAGGTTTGGAAGCTGAGAGTTATAGAAGCCAATTCACCAGGAGGTAAGACATCCCAGGCTGACATGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR CAA 72 bp | TCTAGGCTTTCTTCAAAATGCCAGGTATCTCTACAGTaGGTCTGGAAGGTAGCCAGCTGCCATGGCAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SRLSSKCQVSLQ*VWKVASCHGRP Trigger: TGGCCTGCCATGGCAGCTGGCTACCTTCCAGACCAACTGTAGAGATACCTGGCATTTTGAAGAAAGCCTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR CAA 72 bp | CAGGCTCTGGAATACATCCCAGCTCTGAGAAGCAAGTaGGGGAAGATGAAGACCACTGCACTCCATAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: QALEYIPALRSK*GKMKTTALHKH Trigger: GTGCTTATGGAGTGCAGTGGTCTTCATCTTCCCCAACTTGCTTCTCAGAGCTGGGATGTATTCCAGAGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR CAA 72 bp | GCCTTCTCAGCCTCTCAAGGACTCAGAAATGGCAGCTaGGGGCTAAGAATGAAGTCAGATGTTTGCCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: AFSASQGLRNGS*GLRMKSDVCLC Trigger: GCAGAGGCAAACATCTGACTTCATTCTTAGCCCCAAGCTGCCATTTCTGAGTCCTTGAGAGGCTGAGAAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| CDS-3UTR CCA 90 bp | AACAGTGCTCATTACACAGTGTCACAGTTTGCTGTGGCAATCCTTTACCATAGCCTCGGGGAACCCATCTaGGTGAGGACCTTGTCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: NSAHYTVSQFAVAILYHSLGEPI*VRTLSS Trigger: GCTTGACAAGGTCCTCACCCAGATGGGTTCCCCGAG...GCTATGGTAAAGGATTGCCACAGCAAACTGTGACACTGTGTAATGAGCACTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| CDS-3UTR TCA 90 bp | TATAAGAAGAGGGGACACGGCTCTTTAACAATGGGGTACAATGCTGTAAGATACGGGAACCCATCTGGGTaGGGACCTTGTCAAGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: YKKRGHGSLTMGYNAVRYGNPSG*GPCQAT Trigger: AGTGGCTTGACAAGGTCCTCACCCAGATGGGTTCCC...GTATCTTACAGCATTGTACCCCATTGTTAAAGAGCCGTGTCCCCTCTTCTTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| CDS-3UTR CCA 90 bp | TATAAGAAGAGGGGACACGGCTCTTTAACAATGGGGTACAATGCTGTAAGATACATGGCCCGTAATTCATaGTGGCTGTGCAGGTCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: YKKRGHGSLTMGYNAVRYMARNS*WLCRSG Trigger: GCCCGACCTGCACAGCCACCATGAATTACGGGCCAT...GTATCTTACAGCATTGTACCCCATTGTTAAAGAGCCGTGTCCCCTCTTCTTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| CDS-3UTR CCA 90 bp | CTTTACGGTGAAAAGTTTATTAGAAGGGCGTTTATAAGAAGAGGGGACACGGCTGATGGCTGTGAGGCGTaGAATGTCTCCCCAACTCGC | + |
|
Preference number: 4 (lower is better) Translates to: LYGEKFIRRAFIRRGDTADGCEA*NVSPTR Trigger: GCGAGTTGGGGAGACATTCCACGCCTCACAGCCATC...AGCCGTGTCCCCTCTTCTTATAAACGCCCTTCTAATAAACTTTTCACCGTAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| 3UTR CAA 72 bp | CAGGCTGGTGCCTTAGTTGAGTGGAATCGGTGTTCTTaGACAAGACCAAGTTGGATGGAGTTCTCTTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: QAGALVEWNRCS*TRPSWMEFSSK Trigger: CTTGGAAGAGAACTCCATCCAACTTGGTCTTGTCAAAGAACACCGATTCCACTCAACTAAGGCACCAGCCTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| CDS-3UTR TCA 90 bp | CACTTGGCCTTCAGACAGGGGCACGTGTATGTAGCAGACACAGCTGTTCATAAACATCCTTCTTCATGTTaGAGGCAAACTCACAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HLAFRQGHVYVADTAVHKHPSSC*RQTHRA Trigger: AGCTCTGTGAGTTTGCCTTCAACATGAAGAAGGATG...TTTATGAACAGCTGTGTCTGCTACATACACGTGCCCCTGTCTGAAGGCCAAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| CDS-3UTR GCA 90 bp | CTTTACGGTGAAAAGTTTATTAGAAGGGCGTTTATAAGAAGAGGGGACACGGCTGAGGTTTGGAGAACCTaGGTCCATGCTGTGGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LYGEKFIRRAFIRRGDTAEVWRT*VHAVVH Trigger: ATGAACCACAGCATGGACGCAGGTTCTCCAAACCTC...AGCCGTGTCCCCTCTTCTTATAAACGCCCTTCTAATAAACTTTTCACCGTAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| CDS-3UTR GCA 90 bp | TATAAGAAGAGGGGACACGGCTCTTTAACAATGGGGTACAATGCTGTAAGATACACCTTGTCAAGCCACTaGAAGGGTCCATTCAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: YKKRGHGSLTMGYNAVRYTLSSH*KGPFRC Trigger: ACACCTGAATGGACCCTTGCAGTGGCTTGACAAGGT...GTATCTTACAGCATTGTACCCCATTGTTAAAGAGCCGTGTCCCCTCTTCTTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
||
| CDS-3UTR TCA 90 bp | TTGAATGGCTTTAAGGAATTGTTACATAAATACGAAAGCGGCAGAATGCTAAACTCTTCACCAAGCTCTTaGCCGCCTTCTCGCACCACT | + |
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Preference number: 4 (lower is better) Translates to: LNGFKELLHKYESGRMLNSSPSS*PPSRTT Trigger: AGTGGTGCGAGAAGGCGGTCAAGAGCTTGGTGAAGA...GTTTAGCATTCTGCCGCTTTCGTATTTATGTAACAATTCCTTAAAGCCATTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| 3UTR CAA 72 bp | TTCATACGAAAAGGAGAACTGATTTGGGAGGGCACTTaGATTACACGTACCCAAATGACCTGTGTTCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: FIRKGELIWEGT*ITRTQMTCVLH Trigger: ATGGAGAACACAGGTCATTTGGGTACGTGTAATCAAAGTGCCCTCCCAAATCAGTTCTCCTTTTCGTATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| CDS GCA 90 bp | TTCTTCACCAAGCTCTTGACCGCCTTCTCGCACCACTTCTCCTCCTaGCCGTTCTGCTCGCCCTTCTTCCAACCCAGCAGGCGCTTCACG | + |
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Preference number: 5 (lower is better) Translates to: FFTKLLTAFSHHFSS*PFCSPFFQPSRRFT Trigger: CGTGAAGCGCCTGCTGGGTTGGAAGAAGGGCGAGCAGAACGGGCAGGAGGAGAAGTGGTGCGAGAAGGCGGTCAAGAGCTTGGTGAAGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| CDS-3UTR CAA 90 bp | GCGGATCCTTCCAAGGAAGAATGGGTTCTCCCCAGCTCTACCCTCCGGCGTGTTCAGAAGCGCTCCGAGTaGGAGGGGTCAGTGAAGCCA | + |
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Preference number: 5 (lower is better) Translates to: ADPSKEEWVLPSSTLRRVQKRSE*EGSVKP Trigger: TGGCTTCACTGACCCCTCCAACTCGGAGCGCTTCTG...AACACGCCGGAGGGTAGAGCTGGGGAGAACCCATTCTTCCTTGGAAGGATCCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| CDS-3UTR CAA 90 bp | GCTAGAGCCTTCTCAGCCTCTCAAGGACTCAGAAATGGCAGCTTGGGGCTAAGACAGCCTGGTGGGATCTaGCAGACAGTGGCCGGGTGC | + |
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Preference number: 5 (lower is better) Translates to: ARAFSASQGLRNGSLGLRQPGGI*QTVAGC Trigger: GCACCCGGCCACTGTCTGCAAGATCCCACCAGGCTG...TCTTAGCCCCAAGCTGCCATTTCTGAGTCCTTGAGAGGCTGAGAAGGCTCTAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| CDS TCA 90 bp | TGGACAGTAGGCCCAGGCAGAAGCGCTCCGAGTTGGAGGGGTCAGTaGAGCCATCTACTGTCATGGATGGCTGTGAGGCGTGGAATGTCT | + |
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Preference number: 5 (lower is better) Translates to: WTVGPGRSAPSWRGQ*SHLLSWMAVRRGMS Trigger: AGACATTCCACGCCTCACAGCCATCCATGACAGTAGATGGCTTCACTGACCCCTCCAACTCGGAGCGCTTCTGCCTGGGCCTACTGTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034973.10 ENSMUST00000137713.8 ENSMUST00000154323.8 |
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| CDS-3UTR CAA 90 bp | TTCCCACTTCCAGTAGGGAGGGCCTGTGGTGCATCAGACATACTGTTGAAGGGATTCTTCACCAAGCTCTaGACCGCCTTCTCGCACCAC | + |
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Preference number: 5 (lower is better) Translates to: FPLPVGRACGASDILLKGFFTKL*TAFSHH Trigger: GTGGTGCGAGAAGGCGGTCAAGAGCTTGGTGAAGAA...TCCCTTCAACAGTATGTCTGATGCACCACAGGCCCTCCCTACTGGAAGTGGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| CDS-3UTR CAA 90 bp | AACAGAAGCAGCAGCCAAGAAGCGAGTACCAGTTGCAGGTGGCGATCCTGTGTATCTGCTCCCCAGCCTTaGACGAAGCTCATACGGATG | + |
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Preference number: 5 (lower is better) Translates to: NRSSSQEASTSCRWRSCVSAPQP*TKLIRM Trigger: CATCCGTATGAGCTTCGTCAAAGGCTGGGGAGCAGA...TACACAGGATCGCCACCTGCAACTGGTACTCGCTTCTTGGCTGCTGCTTCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| CDS-3UTR CAA 90 bp | TTCCCACTTCCAGTAGGGAGGGCCTGTGGTGCATCAGACATACTGTTGAAGGGAATCTGGGTGAGGACCTaGTCAAGCCACTGCAAGGGT | + |
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Preference number: 5 (lower is better) Translates to: FPLPVGRACGASDILLKGIWVRT*SSHCKG Trigger: ACCCTTGCAGTGGCTTGACAAGGTCCTCACCCAGAT...TCCCTTCAACAGTATGTCTGATGCACCACAGGCCCTCCCTACTGGAAGTGGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| CDS-3UTR CAA 90 bp | GCTAGAGCCTTCTCAGCCTCTCAAGGACTCAGAAATGGCAGCTTGGGGCTAAGAAACTGCCCCGTCTTCTaGAGCTTCTTCACCAAGCTC | + |
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Preference number: 5 (lower is better) Translates to: ARAFSASQGLRNGSLGLRNCPVF*SFFTKL Trigger: GAGCTTGGTGAAGAAGCTCAAGAAGACGGGGCAGTT...TCTTAGCCCCAAGCTGCCATTTCTGAGTCCTTGAGAGGCTGAGAAGGCTCTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| CDS-3UTR CAA 90 bp | TCTGAGCAGTGCCGGTTCCCTCTACTTTCCAGTTGCAGCAGAATAGACTGTCCCGGGATGGTAATGCACTaGGTGTTCACGTTCTGCGTG | + |
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Preference number: 5 (lower is better) Translates to: SEQCRFPLLSSCSRIDCPGMVMH*VFTFCV Trigger: CACGCAGAACGTGAACACCAAGTGCATTACCATCCC...GGGACAGTCTATTCTGCTGCAACTGGAAAGTAGAGGGAACCGGCACTGCTCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| CDS-3UTR CAA 90 bp | TTCTCTGTAATTGCCGCTGGGAACAGTGCTCATTACACAGTGTCACAGTTTGCTGATTCGGGGAGAGGTTaGGAGAACCTGCGTCCATGC | + |
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Preference number: 5 (lower is better) Translates to: FSVIAAGNSAHYTVSQFADSGRG*ENLRPC Trigger: GCATGGACGCAGGTTCTCCAAACCTCTCCCCGAATC...AGCAAACTGTGACACTGTGTAATGAGCACTGTTCCCAGCGGCAATTACAGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| CDS-3UTR CAA 90 bp | AACAGTGCTCATTACACAGTGTCACAGTTTGCTGTGGCAATCCTTTACCATAGCTGTAGGTCCAAGTTATaGTGTGCTGGGGACATCGGA | + |
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Preference number: 5 (lower is better) Translates to: NSAHYTVSQFAVAILYHSCRSKL*CAGDIG Trigger: TCCGATGTCCCCAGCACACAATAACTTGGACCTACA...GCTATGGTAAAGGATTGCCACAGCAAACTGTGACACTGTGTAATGAGCACTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| CDS-3UTR CAA 90 bp | CTTTACGGTGAAAAGTTTATTAGAAGGGCGTTTATAAGAAGAGGGGACACGGCTTTGAAGATCTTCAGGTaGCAGCCTGGTGGGATCTTG | + |
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Preference number: 5 (lower is better) Translates to: LYGEKFIRRAFIRRGDTALKIFR*QPGGIL Trigger: CAAGATCCCACCAGGCTGCAACCTGAAGATCTTCAA...AGCCGTGTCCCCTCTTCTTATAAACGCCCTTCTAATAAACTTTTCACCGTAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| CDS-3UTR CAA 90 bp | TTGAATGGCTTTAAGGAATTGTTACATAAATACGAAAGCGGCAGAATGCTAAACGGGGTTTCTGGAATATaGCTCTGGGGCTCAATGCCA | + |
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Preference number: 5 (lower is better) Translates to: LNGFKELLHKYESGRMLNGVSGI*LWGSMP Trigger: TGGCATTGAGCCCCAGAGCAATATTCCAGAAACCCC...GTTTAGCATTCTGCCGCTTTCGTATTTATGTAACAATTCCTTAAAGCCATTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| CDS TCA 72 bp | GGCCCAGGCAGAAGCGCTCCGAGTTGGAGGGGTCAGTaGAGCCATCTACTGTCATGGATGGCTGTGAGGCGT | + |
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Preference number: 6 (lower is better) Translates to: GPGRSAPSWRGQ*SHLLSWMAVRR Trigger: ACGCCTCACAGCCATCCATGACAGTAGATGGCTTCACTGACCCCTCCAACTCGGAGCGCTTCTGCCTGGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034973.10 ENSMUST00000137713.8 ENSMUST00000154323.8 |
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| CDS GCA 72 bp | AAGCTCTTGACCGCCTTCTCGCACCACTTCTCCTCCTaGCCGTTCTGCTCGCCCTTCTTCCAACCCAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: KLLTAFSHHFSS*PFCSPFFQPSR Trigger: CCTGCTGGGTTGGAAGAAGGGCGAGCAGAACGGGCAGGAGGAGAAGTGGTGCGAGAAGGCGGTCAAGAGCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| CDS CCA 72 bp | AAGGCAAACTCACAGAGCTCCATGGCCCGTAATTCATaGTGGCTGTGCAGGTCGGGCCATCGCCACAGGCGG | + |
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Preference number: 6 (lower is better) Translates to: KANSQSSMARNS*WLCRSGHRHRR Trigger: CCGCCTGTGGCGATGGCCCGACCTGCACAGCCACCATGAATTACGGGCCATGGAGCTCTGTGAGTTTGCCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034973.10 ENSMUST00000133108.3 ENSMUST00000154323.8 |
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| CDS CCA 72 bp | GACACACTGGAACAGCGGATGCTCGGGGAACCCATCTaGGTGAGGACCTTGTCAAGCCACTGCAAGGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: DTLEQRMLGEPI*VRTLSSHCKGP Trigger: TGGACCCTTGCAGTGGCTTGACAAGGTCCTCACCCAGATGGGTTCCCCGAGCATCCGCTGTTCCAGTGTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| CDS CAA 90 bp | CCAATGTGTCGCCTTGTAAGTTCCACGGCTGCATTCCGGTTGACATaGGACAGTAGGCCCAGGCAGAAGCGCTCCGAGTTGGAGGGGTCA | + |
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Preference number: 6 (lower is better) Translates to: PMCRLVSSTAAFRLT*DSRPRQKRSELEGS Trigger: TGACCCCTCCAACTCGGAGCGCTTCTGCCTGGGCCTACTGTCCAATGTCAACCGGAATGCAGCCGTGGAACTTACAAGGCGACACATTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034973.10 ENSMUST00000137713.8 ENSMUST00000154323.8 |
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| CDS CAA 90 bp | CCTCTCCCAATGTGTCGCCTTGTAAGTTCCACGGCTGCATTCCGGTaGACATTGGACAGTAGGCCCAGGCAGAAGCGCTCCGAGTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: PLPMCRLVSSTAAFR*TLDSRPRQKRSELE Trigger: CTCCAACTCGGAGCGCTTCTGCCTGGGCCTACTGTCCAATGTCAACCGGAATGCAGCCGTGGAACTTACAAGGCGACACATTGGGAGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034973.10 ENSMUST00000137713.8 ENSMUST00000154323.8 |
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| CDS TCA 72 bp | CACTGGAACAGCGGATGCTCGGGGAACCCATCTGGGTaGGGACCTTGTCAAGCCACTGCAAGGGTCCATTCA | + |
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Preference number: 6 (lower is better) Translates to: HWNSGCSGNPSG*GPCQATARVHS Trigger: TGAATGGACCCTTGCAGTGGCTTGACAAGGTCCTCACCCAGATGGGTTCCCCGAGCATCCGCTGTTCCAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034973.10 |
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| CDS CAA 72 bp | CGCCTTGTAAGTTCCACGGCTGCATTCCGGTTGACATaGGACAGTAGGCCCAGGCAGAAGCGCTCCGAGTTG | + |
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Preference number: 6 (lower is better) Translates to: RLVSSTAAFRLT*DSRPRQKRSEL Trigger: CAACTCGGAGCGCTTCTGCCTGGGCCTACTGTCCAATGTCAACCGGAATGCAGCCGTGGAACTTACAAGGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034973.10 ENSMUST00000137713.8 ENSMUST00000154323.8 |
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| CDS CAA 72 bp | ATGTGTCGCCTTGTAAGTTCCACGGCTGCATTCCGGTaGACATTGGACAGTAGGCCCAGGCAGAAGCGCTCC | + |
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Preference number: 6 (lower is better) Translates to: MCRLVSSTAAFR*TLDSRPRQKRS Trigger: GGAGCGCTTCTGCCTGGGCCTACTGTCCAATGTCAACCGGAATGCAGCCGTGGAACTTACAAGGCGACACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034973.10 ENSMUST00000137713.8 ENSMUST00000154323.8 |
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