Pregenerated sensors for SMAD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024563Ensembl transcript IDs: ENSMUST00000025453.15, ENSMUST00000091831.13, ENSMUST00000113930.3, ENSMUST00000168423.9, ENSMUST00000171256.8
Found 196 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGCTTGAAGGCCCTTGCAGAGGCCCAGAGCCACACTACTGTGTACTaGGCTCCCAGGAGGCCAGCCTTGAGGCAGGAGGCCTCTGATGCT | + |
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Preference number: 1 (lower is better) Translates to: SLKALAEAQSHTTVY*APRRPALRQEASDA Trigger: AGCATCAGAGGCCTCCTGCCTCAAGGCTGGCCTCCTGGGAGCTCAGTACACAGTAGTGTGGCTCTGGGCCTCTGCAAGGGCCTTCAAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
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| 3UTR CCA 90 bp | CACCACCCTACAGAGGCAAGGACAAATGTGCAACCAGCTAGGCACTaGCCCTTCAAGGCAGGTTTCTTCTCAGCTCCCCAAAGCCAACCC | + |
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Preference number: 1 (lower is better) Translates to: HHPTEARTNVQPARH*PFKAGFFSAPQSQP Trigger: GGGTTGGCTTTGGGGAGCTGAGAAGAAACCTGCCTTGAAGGGCCAGTGCCTAGCTGGTTGCACATTTGTCCTTGCCTCTGTAGGGTGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
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| 3UTR CCA 90 bp | CCTAAGGGGACAACTCCTCCCAGGACCCCTAGGACTCACTTTGGTTaGCACTTAGCATTGCATATCTGGGACCCTTGTCCCAGGCATGGC | + |
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Preference number: 1 (lower is better) Translates to: PKGTTPPRTPRTHFG*HLALHIWDPCPRHG Trigger: GCCATGCCTGGGACAAGGGTCCCAGATATGCAATGCTAAGTGCCAACCAAAGTGAGTCCTAGGGGTCCTGGGAGGAGTTGTCCCCTTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
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| 3UTR GCA 90 bp | TGTGCTGCAGAAGGGAGGACCAAAGGACAGCTGGGATCTCCTTCCTaGAGAGCTGAAAGGTCAGCAAACCACACACCCAGGGTAAGTCAG | + |
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Preference number: 1 (lower is better) Translates to: CAAEGRTKGQLGSPS*RAERSANHTPRVSQ Trigger: CTGACTTACCCTGGGTGTGTGGTTTGCTGACCTTTCAGCTCTGCAGGAAGGAGATCCCAGCTGTCCTTTGGTCCTCCCTTCTGCAGCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
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| 3UTR TCA 90 bp | AGAAGGGAGGACCAAAGGACAGCTGGGATCTCCTTCCTGCAGAGCTaGAAGGTCAGCAAACCACACACCCAGGGTAAGTCAGGAAGAGCT | + |
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Preference number: 1 (lower is better) Translates to: RREDQRTAGISFLQS*KVSKPHTQGKSGRA Trigger: AGCTCTTCCTGACTTACCCTGGGTGTGTGGTTTGCTGACCTTTCAGCTCTGCAGGAAGGAGATCCCAGCTGTCCTTTGGTCCTCCCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
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| 3UTR CCA 90 bp | TGGCACTTAGCATTGCATATCTGGGACCCTTGTCCCAGGCATGGCTaGGACTGGTCACCTTCCCTTGACACGTGCAGAGAAAAGAACGTC | + |
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Preference number: 1 (lower is better) Translates to: WHLALHIWDPCPRHG*DWSPSLDTCREKNV Trigger: GACGTTCTTTTCTCTGCACGTGTCAAGGGAAGGTGACCAGTCCCAGCCATGCCTGGGACAAGGGTCCCAGATATGCAATGCTAAGTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
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| 3UTR GCA 90 bp | TTGCAAACGAGAAAGGAGTCAACACTGGACATGACTGTCGTGTGCTaGAGAAGGGAGGACCAAAGGACAGCTGGGATCTCCTTCCTGCAG | + |
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Preference number: 1 (lower is better) Translates to: LQTRKESTLDMTVVC*RREDQRTAGISFLQ Trigger: CTGCAGGAAGGAGATCCCAGCTGTCCTTTGGTCCTCCCTTCTGCAGCACACGACAGTCATGTCCAGTGTTGACTCCTTTCTCGTTTGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
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| 3UTR GCA 90 bp | GAGTTGCAAACGAGAAAGGAGTCAACACTGGACATGACTGTCGTGTaGTGCAGAAGGGAGGACCAAAGGACAGCTGGGATCTCCTTCCTG | + |
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Preference number: 1 (lower is better) Translates to: ELQTRKESTLDMTVV*CRREDQRTAGISFL Trigger: CAGGAAGGAGATCCCAGCTGTCCTTTGGTCCTCCCTTCTGCAGCACACGACAGTCATGTCCAGTGTTGACTCCTTTCTCGTTTGCAACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
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| 3UTR GCA 90 bp | CACATTCTAATTTCGTGTATGAGGACAGCCAAGCTTGAAGGCCCTTaGAGAGGCCCAGAGCCACACTACTGTGTACTGAGCTCCCAGGAG | + |
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Preference number: 1 (lower is better) Translates to: HILISCMRTAKLEGP*RGPEPHYCVLSSQE Trigger: CTCCTGGGAGCTCAGTACACAGTAGTGTGGCTCTGGGCCTCTGCAAGGGCCTTCAAGCTTGGCTGTCCTCATACACGAAATTAGAATGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
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| 3UTR TCA 90 bp | GCATTTGTACGGAGTTGCAAACGAGAAAGGAGTCAACACTGGACATaGCTGTCGTGTGCTGCAGAAGGGAGGACCAAAGGACAGCTGGGA | + |
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Preference number: 1 (lower is better) Translates to: AFVRSCKRERSQHWT*LSCAAEGRTKGQLG Trigger: TCCCAGCTGTCCTTTGGTCCTCCCTTCTGCAGCACACGACAGTCATGTCCAGTGTTGACTCCTTTCTCGTTTGCAACTCCGTACAAATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
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| 3UTR CCA 90 bp | TTAGCATTGCATATCTGGGACCCTTGTCCCAGGCATGGCTGGGACTaGTCACCTTCCCTTGACACGTGCAGAGAAAAGAACGTCTGTGTA | + |
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Preference number: 1 (lower is better) Translates to: LALHIWDPCPRHGWD*SPSLDTCREKNVCV Trigger: TACACAGACGTTCTTTTCTCTGCACGTGTCAAGGGAAGGTGACCAGTCCCAGCCATGCCTGGGACAAGGGTCCCAGATATGCAATGCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
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| 3UTR CCA 90 bp | TATCAGGACACCAAAGCCTTAAGCCACAGTATGGGGAAAGGCCCTTaGCTGCCCTGTGAAGACATACCTGAGATAGTTGCACAGAGAGGT | + |
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Preference number: 1 (lower is better) Translates to: YQDTKALSHSMGKGP*LPCEDIPEIVAQRG Trigger: ACCTCTCTGTGCAACTATCTCAGGTATGTCTTCACAGGGCAGCCAAGGGCCTTTCCCCATACTGTGGCTTAAGGCTTTGGTGTCCTGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
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| 3UTR CCA 90 bp | AACAGGAACTCTCACAGGACTAAGCCCAACTCCAGAGCCAGGACATaGTCCCAGAATCACATTGGCTGGGTAAACAATAGGCAGGAACTA | + |
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Preference number: 1 (lower is better) Translates to: NRNSHRTKPNSRART*SQNHIGWVNNRQEL Trigger: TAGTTCCTGCCTATTGTTTACCCAGCCAATGTGATTCTGGGACCATGTCCTGGCTCTGGAGTTGGGCTTAGTCCTGTGAGAGTTCCTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
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| 3UTR CCA 90 bp | GCCAATGGCAGAGGTCTACCTCTGCAGACCACAGACCACCATCACTaGAATAAATCGGACACTTTACAACAGTGGTTTCTCAACCTGTGG | + |
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Preference number: 1 (lower is better) Translates to: ANGRGLPLQTTDHHH*NKSDTLQQWFLNLW Trigger: CCACAGGTTGAGAAACCACTGTTGTAAAGTGTCCGATTTATTCCAGTGATGGTGGTCTGTGGTCTGCAGAGGTAGACCTCTGCCATTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
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| 3UTR GCA 90 bp | GAGCCTGAGCCTTTGGATGCTGATAATGTTCCAGCAGTGTTAAATTaGCCTTGGCTCTTCACATGGCTTTCTCTTCCTAGGTCAGGGGTT | + |
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Preference number: 1 (lower is better) Translates to: EPEPLDADNVPAVLN*PWLFTWLSLPRSGV Trigger: AACCCCTGACCTAGGAAGAGAAAGCCATGTGAAGAGCCAAGGGCAATTTAACACTGCTGGAACATTATCAGCATCCAAAGGCTCAGGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
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| 3UTR CCA 90 bp | CAACCAGCCAGGAACCTTAAAGCCAGAGAGAGGAAGGGTAACAGCTaGTTTGGAAGTTGTACACTAATCAGAGCGTTTTCCAACACGCTA | + |
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Preference number: 1 (lower is better) Translates to: QPARNLKARERKGNS*FGSCTLIRAFSNTL Trigger: TAGCGTGTTGGAAAACGCTCTGATTAGTGTACAACTTCCAAACCAGCTGTTACCCTTCCTCTCTCTGGCTTTAAGGTTCCTGGCTGGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
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| 3UTR TCA 90 bp | AAGCAGCCTGTCACAAAGCAGTCCCACCTTCAACAAATTCTAAACTaGACAAGCATTTTCATCACCACGTGTGGGTGTGTGCAGGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: KQPVTKQSHLQQILN*TSIFITTCGCVQVC Trigger: ACACACCTGCACACACCCACACGTGGTGATGAAAATGCTTGTTCAGTTTAGAATTTGTTGAAGGTGGGACTGCTTTGTGACAGGCTGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
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| 3UTR CCA 90 bp | GCTGATAATGTTCCAGCAGTGTTAAATTGCCCTTGGCTCTTCACATaGCTTTCTCTTCCTAGGTCAGGGGTTAGCTTACACATCACTCTC | + |
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Preference number: 1 (lower is better) Translates to: ADNVPAVLNCPWLFT*LSLPRSGVSLHITL Trigger: GAGAGTGATGTGTAAGCTAACCCCTGACCTAGGAAGAGAAAGCCATGTGAAGAGCCAAGGGCAATTTAACACTGCTGGAACATTATCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
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| 3UTR CCA 90 bp | ACAAGTAAAATAATCAAGCAAGCTGGAAAACAGAAGAGGAGCCAATaGCAGAGGTCTACCTCTGCAGACCACAGACCACCATCACTGGAA | + |
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Preference number: 1 (lower is better) Translates to: TSKIIKQAGKQKRSQ*QRSTSADHRPPSLE Trigger: TTCCAGTGATGGTGGTCTGTGGTCTGCAGAGGTAGACCTCTGCCATTGGCTCCTCTTCTGTTTTCCAGCTTGCTTGATTATTTTACTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
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| 3UTR GCA 90 bp | TTTCTCTTCCTAGGTCAGGGGTTAGCTTACACATCACTCTCCAGATaGCTTCCTAATATCCTACCAAAAGCATCGTCTCTGCCATTCTCA | + |
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Preference number: 1 (lower is better) Translates to: FLFLGQGLAYTSLSR*LPNILPKASSLPFS Trigger: TGAGAATGGCAGAGACGATGCTTTTGGTAGGATATTAGGAAGGCATCTGGAGAGTGATGTGTAAGCTAACCCCTGACCTAGGAAGAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
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| 3UTR CCA 90 bp | GAAAACCTATTCCTGAACCCCAACCATGGAGCTGTGTCTCACTGTTaGCAACACTTTAACATGTCTGATAACCTCCTACCACTTTCAAAG | + |
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Preference number: 1 (lower is better) Translates to: ENLFLNPNHGAVSHC*QHFNMSDNLLPLSK Trigger: CTTTGAAAGTGGTAGGAGGTTATCAGACATGTTAAAGTGTTGCCAACAGTGAGACACAGCTCCATGGTTGGGGTTCAGGAATAGGTTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
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| 3UTR TCA 90 bp | GCCAGTCACTGTGGATTTTCTTGGTTTAGCTCACCTAGAAAGTGCTaGGTGTTACAGATCACTGCCACCAACAAAGAAAGTCAAATACTC | + |
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Preference number: 1 (lower is better) Translates to: ASHCGFSWFSSPRKC*VLQITATNKESQIL Trigger: GAGTATTTGACTTTCTTTGTTGGTGGCAGTGATCTGTAACACTCAGCACTTTCTAGGTGAGCTAAACCAAGAAAATCCACAGTGACTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
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| 3UTR GCA 90 bp | ATAAAGGCTTGCCTAGACCAAGAAGCAGCACACACACCTCATTTATaGAAACTAAGAATGTATACAAACAGCATAGTACTGCAATACTGG | + |
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Preference number: 1 (lower is better) Translates to: IKACLDQEAAHTPHL*KLRMYTNSIVLQYW Trigger: CCAGTATTGCAGTACTATGCTGTTTGTATACATTCTTAGTTTGCATAAATGAGGTGTGTGTGCTGCTTCTTGGTCTAGGCAAGCCTTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
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| 3UTR CCA 90 bp | AACAGAACAACTGGTTATACACATCAGTTATCATCTGCTGAAGTCTaGTTATTAGACAAAAGGACTTACTGCCCACACAAACCTTTCCTG | + |
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Preference number: 1 (lower is better) Translates to: NRTTGYTHQLSSAEV*LLDKRTYCPHKPFL Trigger: CAGGAAAGGTTTGTGTGGGCAGTAAGTCCTTTTGTCTAATAACCAGACTTCAGCAGATGATAACTGATGTGTATAACCAGTTGTTCTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
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| 3UTR CCA 90 bp | AATAATGTTGAGTTTGCTACTTGTCAGTCACAGGGACATTTTAACTaGGCAAAAATTCCAGAGTCATTTGAAAGACTCCAACAACGGTCC | + |
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Preference number: 1 (lower is better) Translates to: NNVEFATCQSQGHFN*AKIPESFERLQQRS Trigger: GGACCGTTGTTGGAGTCTTTCAAATGACTCTGGAATTTTTGCCCAGTTAAAATGTCCCTGTGACTGACAAGTAGCAAACTCAACATTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
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| 3UTR GCA 90 bp | GAAGTCGAAGGTAAAGCTGGTCTAATGTGTGCCCAATTTGAATTCTaGATTTTACCAAGAAATAGGCTGGATCGGTATATGTACATACAT | + |
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Preference number: 1 (lower is better) Translates to: EVEGKAGLMCAQFEF*ILPRNRLDRYMYIH Trigger: ATGTATGTACATATACCGATCCAGCCTATTTCTTGGTAAAATGCAGAATTCAAATTGGGCACACATTAGACCAGCTTTACCTTCGACTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
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| 3UTR TCA 90 bp | ATAAATTACATACAATACACTTTAAAAACAGATGGCCCTATCTGCTaGCAAGACCTCAGCGTCACTCTAACACATTTACAAAAGGTCTGT | + |
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Preference number: 1 (lower is better) Translates to: INYIQYTLKTDGPIC*QDLSVTLTHLQKVC Trigger: ACAGACCTTTTGTAAATGTGTTAGAGTGACGCTGAGGTCTTGTCAGCAGATAGGGCCATCTGTTTTTAAAGTGTATTGTATGTAATTTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
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| 3UTR TCA 90 bp | AAAGGTACTTTATTATTAGACTGGCTTTGGAAGAAGGAAACAGACTaGGATGATTCTAGAATAGCCCTGAAAATAATTATACTGCCACCT | + |
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Preference number: 1 (lower is better) Translates to: KGTLLLDWLWKKETD*DDSRIALKIIILPP Trigger: AGGTGGCAGTATAATTATTTTCAGGGCTATTCTAGAATCATCTCAGTCTGTTTCCTTCTTCCAAAGCCAGTCTAATAATAAAGTACCTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
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| 3UTR-3UTR GCA 90 bp | CAGGACACCAAAGCCTTAAGCCACAGTATGGGGAAAGGCCCTTGGCTGCCCTGTGACATGACTGTCGTGTaGTGCAGAAGGGAGGACCAA | + |
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Preference number: 2 (lower is better) Translates to: QDTKALSHSMGKGPWLPCDMTVV*CRREDQ Trigger: TTGGTCCTCCCTTCTGCAGCACACGACAGTCATGTC...ACAGGGCAGCCAAGGGCCTTTCCCCATACTGTGGCTTAAGGCTTTGGTGTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
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| 3UTR-3UTR CCA 90 bp | CAGGACACCAAAGCCTTAAGCCACAGTATGGGGAAAGGCCCTTGGCTGCCCTGTGGTAGGGAAGGCAACTaGGCATCTGCTTTCTTTGAC | + |
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Preference number: 2 (lower is better) Translates to: QDTKALSHSMGKGPWLPCGREGN*ASAFFD Trigger: GTCAAAGAAAGCAGATGCCCAGTTGCCTTCCCTACC...ACAGGGCAGCCAAGGGCCTTTCCCCATACTGTGGCTTAAGGCTTTGGTGTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
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| 3UTR-3UTR TCA 90 bp | GCCAATGGCAGAGGTCTACCTCTGCAGACCACAGACCACCATCACTGGAATAAATCCTTCCTGCAGAGCTaGAAGGTCAGCAAACCACAC | + |
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Preference number: 2 (lower is better) Translates to: ANGRGLPLQTTDHHHWNKSFLQS*KVSKPH Trigger: GTGTGGTTTGCTGACCTTTCAGCTCTGCAGGAAGGA...TTTATTCCAGTGATGGTGGTCTGTGGTCTGCAGAGGTAGACCTCTGCCATTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
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| 3UTR-3UTR GCA 90 bp | ACTAAGCCCAACTCCAGAGCCAGGACATGGTCCCAGAATCACATTGGCTGGGTAAGGCAAAAGGTCGGCTaGCTTTACAGAAAGGTACTT | + |
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Preference number: 2 (lower is better) Translates to: TKPNSRARTWSQNHIGWVRQKVG*LYRKVL Trigger: AAGTACCTTTCTGTAAAGGCAGCCGACCTTTTGCCT...TACCCAGCCAATGTGATTCTGGGACCATGTCCTGGCTCTGGAGTTGGGCTTAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
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| 3UTR-3UTR CCA 90 bp | CAGGACACCAAAGCCTTAAGCCACAGTATGGGGAAAGGCCCTTGGCTGCCCTGTCACTTTAAAAACAGATaGCCCTATCTGCTGACAAGA | + |
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Preference number: 2 (lower is better) Translates to: QDTKALSHSMGKGPWLPCHFKNR*PYLLTR Trigger: TCTTGTCAGCAGATAGGGCCATCTGTTTTTAAAGTG...ACAGGGCAGCCAAGGGCCTTTCCCCATACTGTGGCTTAAGGCTTTGGTGTCCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
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| 3UTR-3UTR CCA 90 bp | CCTCACCACCAAATCAACTACTCTCCAGCAAAGAGGACACCTAAGAGAACAACTTCCAGAGCCAGGACATaGTCCCAGAATCACATTGGC | + |
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Preference number: 2 (lower is better) Translates to: PHHQINYSPAKRTPKRTTSRART*SQNHIG Trigger: GCCAATGTGATTCTGGGACCATGTCCTGGCTCTGGA...AGTTGTTCTCTTAGGTGTCCTCTTTGCTGGAGAGTAGTTGATTTGGTGGTGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
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| 3UTR-3UTR GCA 90 bp | GCCAATGGCAGAGGTCTACCTCTGCAGACCACAGACCACCATCACTGGAATAAAGCATTTGTACGGAGTTaGAAACGAGAAAGGAGTCAA | + |
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Preference number: 2 (lower is better) Translates to: ANGRGLPLQTTDHHHWNKAFVRS*KRERSQ Trigger: TTGACTCCTTTCTCGTTTGCAACTCCGTACAAATGC...TTTATTCCAGTGATGGTGGTCTGTGGTCTGCAGAGGTAGACCTCTGCCATTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
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| 3UTR-3UTR GCA 90 bp | CTCTTGGCAGAGGTAGGGAAGGCAACTGGGCATCTGCTTTCTTTGACTTCAACCCAAAAGCATCGTCTCTaGCATTCTCAAAGTATACCC | + |
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Preference number: 2 (lower is better) Translates to: LLAEVGKATGHLLSLTSTQKHRL*HSQSIP Trigger: GGGTATACTTTGAGAATGGCAGAGACGATGCTTTTG...GGTTGAAGTCAAAGAAAGCAGATGCCCAGTTGCCTTCCCTACCTCTGCCAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
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| 3UTR-3UTR CCA 90 bp | CTCTTGGCAGAGGTAGGGAAGGCAACTGGGCATCTGCTTTCTTTGACTTCAACCCACACAAACCTTTCCTaGACTCAGAAACAACTAACC | + |
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Preference number: 2 (lower is better) Translates to: LLAEVGKATGHLLSLTSTHTNLS*TQKQLT Trigger: GGTTAGTTGTTTCTGAGTCCAGGAAAGGTTTGTGTG...GGTTGAAGTCAAAGAAAGCAGATGCCCAGTTGCCTTCCCTACCTCTGCCAAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
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| 3UTR CAA 90 bp | AACTCAGACCAAGTACATTTAGTGGTAGTGTATCAGACTTCACTCTaGAAACCCACTTTCAGACAAGACGTCCCGAGTCTCCTGTTCCCG | + |
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Preference number: 2 (lower is better) Translates to: NSDQVHLVVVYQTSL*KPTFRQDVPSLLFP Trigger: CGGGAACAGGAGACTCGGGACGTCTTGTCTGAAAGTGGGTTTCAAGAGTGAAGTCTGATACACTACCACTAAATGTACTTGGTCTGAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
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| 3UTR-3UTR TCA 90 bp | GCCAATGGCAGAGGTCTACCTCTGCAGACCACAGACCACCATCACTGGAATAAAAAGAAGGAAACAGACTaGGATGATTCTAGAATAGCC | + |
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Preference number: 2 (lower is better) Translates to: ANGRGLPLQTTDHHHWNKKKETD*DDSRIA Trigger: GGCTATTCTAGAATCATCTCAGTCTGTTTCCTTCTT...TTTATTCCAGTGATGGTGGTCTGTGGTCTGCAGAGGTAGACCTCTGCCATTGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
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| 3UTR-3UTR TCA 90 bp | CCTCACCACCAAATCAACTACTCTCCAGCAAAGAGGACACCTAAGAGAACAACTGGCATCTGCTTTCTTTaGCTTCAACCAGCAAAAGCC | + |
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Preference number: 2 (lower is better) Translates to: PHHQINYSPAKRTPKRTTGICFL*LQPAKA Trigger: GGCTTTTGCTGGTTGAAGTCAAAGAAAGCAGATGCC...AGTTGTTCTCTTAGGTGTCCTCTTTGCTGGAGAGTAGTTGATTTGGTGGTGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
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| 3UTR-3UTR CCA 90 bp | CCTCACCACCAAATCAACTACTCTCCAGCAAAGAGGACACCTAAGAGAACAACTGTGTTAAATTGCCCTTaGCTCTTCACATGGCTTTCT | + |
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Preference number: 2 (lower is better) Translates to: PHHQINYSPAKRTPKRTTVLNCP*LFTWLS Trigger: AGAAAGCCATGTGAAGAGCCAAGGGCAATTTAACAC...AGTTGTTCTCTTAGGTGTCCTCTTTGCTGGAGAGTAGTTGATTTGGTGGTGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
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| 3UTR-3UTR TCA 90 bp | TTACATACAATACACTTTAAAAACAGATGGCCCTATCTGCTGACAAGACCTCAGGATCCACTGGACACATaGAGGTCAAGGACTTCCAAG | + |
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Preference number: 2 (lower is better) Translates to: LHTIHFKNRWPYLLTRPQDPLDT*RSRTSK Trigger: CTTGGAAGTCCTTGACCTTCATGTGTCCAGTGGATC...CTGAGGTCTTGTCAGCAGATAGGGCCATCTGTTTTTAAAGTGTATTGTATGTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
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| 3UTR-3UTR CCA 90 bp | TATAAAGGCTTGCCTAGACCAAGAAGCAGCACACACACCTCATTTATGCAAACTCTGCAATACTGGGTCTaGACACATTACCTGTACACA | + |
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Preference number: 2 (lower is better) Translates to: YKGLPRPRSSTHTSFMQTLQYWV*THYLYT Trigger: TGTGTACAGGTAATGTGTCCAGACCCAGTATTGCAG...AGTTTGCATAAATGAGGTGTGTGTGCTGCTTCTTGGTCTAGGCAAGCCTTTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
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| 3UTR CAA 90 bp | GCTTTAACTGATGAGACCTCAAGTGCTGTTTTTGCTCTGGAATTTTaGGATAGCAAACAGTCCACGGGATCATACATGAATACTACGACG | + |
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Preference number: 2 (lower is better) Translates to: ALTDETSSAVFALEF*DSKQSTGSYMNTTT Trigger: CGTCGTAGTATTCATGTATGATCCCGTGGACTGTTTGCTATCCAAAAATTCCAGAGCAAAAACAGCACTTGAGGTCTCATCAGTTAAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
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| 3UTR CAA 90 bp | GTCAGTCACAGGGACATTTTAACTGGGCAAAAATTCCAGAGTCATTaGAAAGACTCCAACAACGGTCCAGGAATGAACAATACTAGCTTG | + |
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Preference number: 2 (lower is better) Translates to: VSHRDILTGQKFQSH*KDSNNGPGMNNTSL Trigger: CAAGCTAGTATTGTTCATTCCTGGACCGTTGTTGGAGTCTTTCAAATGACTCTGGAATTTTTGCCCAGTTAAAATGTCCCTGTGACTGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
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| 3UTR-3UTR CCA 90 bp | TGTAATTTTATAAAGGCTTGCCTAGACCAAGAAGCAGCACACACACCTCATTTAATAGTACTGCAATACTaGGTCTGGACACATTACCTG | + |
|
Preference number: 2 (lower is better) Translates to: CNFIKACLDQEAAHTPHLIVLQY*VWTHYL Trigger: CAGGTAATGTGTCCAGACCCAGTATTGCAGTACTAT...TAAATGAGGTGTGTGTGCTGCTTCTTGGTCTAGGCAAGCCTTTATAAAATTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| 3UTR-3UTR CCA 90 bp | TCTCAAAGTATACCCTGTTTACCTCCTATGCAGACACTTGAGTATGGGTTAAACTCATCTGCTGAAGTCTaGTTATTAGACAAAAGGACT | + |
|
Preference number: 2 (lower is better) Translates to: SQSIPCLPPMQTLEYGLNSSAEV*LLDKRT Trigger: AGTCCTTTTGTCTAATAACCAGACTTCAGCAGATGA...GTTTAACCCATACTCAAGTGTCTGCATAGGAGGTAAACAGGGTATACTTTGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| 3UTR-3UTR GCA 90 bp | TTACATACAATACACTTTAAAAACAGATGGCCCTATCTGCTGACAAGACCTCAGAATTTTATAAAGGCTTaGCTAGACCAAGAAGCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: LHTIHFKNRWPYLLTRPQNFIKA*LDQEAA Trigger: TGCTGCTTCTTGGTCTAGGCAAGCCTTTATAAAATT...CTGAGGTCTTGTCAGCAGATAGGGCCATCTGTTTTTAAAGTGTATTGTATGTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| 3UTR-3UTR CCA 90 bp | TGTAATTTTATAAAGGCTTGCCTAGACCAAGAAGCAGCACACACACCTCATTTAGTGCTGTTTTTGCTCTaGAATTTTTGGATAGCAAAC | + |
|
Preference number: 2 (lower is better) Translates to: CNFIKACLDQEAAHTPHLVLFLL*NFWIAN Trigger: GTTTGCTATCCAAAAATTCCAGAGCAAAAACAGCAC...TAAATGAGGTGTGTGTGCTGCTTCTTGGTCTAGGCAAGCCTTTATAAAATTACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| 3UTR-3UTR CCA 90 bp | TATACAAACAGCATAGTACTGCAATACTGGGTCTGGACACATTACCTGTACACAGTTATTAATAACCTTTaGGATACTGTCTTATGCCCA | + |
|
Preference number: 2 (lower is better) Translates to: YTNSIVLQYWVWTHYLYTVINNL*DTVLCP Trigger: TGGGCATAAGACAGTATCCCAAAGGTTATTAATAAC...TGTGTACAGGTAATGTGTCCAGACCCAGTATTGCAGTACTATGCTGTTTGTATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| 3UTR-3UTR CCA 90 bp | TACTGGGTCTGGACACATTACCTGTACACAACTACTACTGTTATTAATAACCTTGTGCTGTTTTTGCTCTaGAATTTTTGGATAGCAAAC | + |
|
Preference number: 2 (lower is better) Translates to: YWVWTHYLYTTTTVINNLVLFLL*NFWIAN Trigger: GTTTGCTATCCAAAAATTCCAGAGCAAAAACAGCAC...AAGGTTATTAATAACAGTAGTAGTTGTGTACAGGTAATGTGTCCAGACCCAGTA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| 3UTR-3UTR CCA 90 bp | GAAGCAGCACACACACCTCATTTATGCAAACTAAGAATGTATACAAACAGCATAGTTATTAATAACCTTTaGGATACTGTCTTATGCCCA | + |
|
Preference number: 2 (lower is better) Translates to: EAAHTPHLCKLRMYTNSIVINNL*DTVLCP Trigger: TGGGCATAAGACAGTATCCCAAAGGTTATTAATAAC...TATGCTGTTTGTATACATTCTTAGTTTGCATAAATGAGGTGTGTGTGCTGCTTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| 3UTR TCA 72 bp | GCCCTTGCAGAGGCCCAGAGCCACACTACTGTGTACTaGGCTCCCAGGAGGCCAGCCTTGAGGCAGGAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: ALAEAQSHTTVY*APRRPALRQEA Trigger: GGCCTCCTGCCTCAAGGCTGGCCTCCTGGGAGCTCAGTACACAGTAGTGTGGCTCTGGGCCTCTGCAAGGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| 3UTR GCA 72 bp | GAAGGGAGGACCAAAGGACAGCTGGGATCTCCTTCCTaGAGAGCTGAAAGGTCAGCAAACCACACACCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: EGRTKGQLGSPS*RAERSANHTPR Trigger: CCTGGGTGTGTGGTTTGCTGACCTTTCAGCTCTGCAGGAAGGAGATCCCAGCTGTCCTTTGGTCCTCCCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| 3UTR TCA 72 bp | AGCTCCCAGGAGGCCAGCCTTGAGGCAGGAGGCCTCTaGTGCTTTTTCACTTGCCTTCCAATGAAGTTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: SSQEASLEAGGL*CFFTCLPMKLQ Trigger: CTGCAACTTCATTGGAAGGCAAGTGAAAAAGCATCAGAGGCCTCCTGCCTCAAGGCTGGCCTCCTGGGAGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| 3UTR CCA 72 bp | TGTCGTGTGCTGCAGAAGGGAGGACCAAAGGACAGCTaGGATCTCCTTCCTGCAGAGCTGAAAGGTCAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: CRVLQKGGPKDS*DLLPAELKGQQ Trigger: TTGCTGACCTTTCAGCTCTGCAGGAAGGAGATCCCAGCTGTCCTTTGGTCCTCCCTTCTGCAGCACACGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| 3UTR-3UTR CAA 90 bp | CAGGACACCAAAGCCTTAAGCCACAGTATGGGGAAAGGCCCTTGGCTGCCCTGTAAGGAGACCAGGCATTaGTACGGAGTTGCAAACGAG | + |
|
Preference number: 3 (lower is better) Translates to: QDTKALSHSMGKGPWLPCKETRH*YGVANE Trigger: CTCGTTTGCAACTCCGTACAAATGCCTGGTCTCCTT...ACAGGGCAGCCAAGGGCCTTTCCCCATACTGTGGCTTAAGGCTTTGGTGTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| 3UTR TCA 72 bp | GACCAAAGGACAGCTGGGATCTCCTTCCTGCAGAGCTaGAAGGTCAGCAAACCACACACCCAGGGTAAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: DQRTAGISFLQS*KVSKPHTQGKS Trigger: TGACTTACCCTGGGTGTGTGGTTTGCTGACCTTTCAGCTCTGCAGGAAGGAGATCCCAGCTGTCCTTTGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| 3UTR GCA 72 bp | AGAAAGGAGTCAACACTGGACATGACTGTCGTGTGCTaGAGAAGGGAGGACCAAAGGACAGCTGGGATCTCC | + |
|
Preference number: 3 (lower is better) Translates to: RKESTLDMTVVC*RREDQRTAGIS Trigger: GGAGATCCCAGCTGTCCTTTGGTCCTCCCTTCTGCAGCACACGACAGTCATGTCCAGTGTTGACTCCTTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| 3UTR GCA 72 bp | ACGAGAAAGGAGTCAACACTGGACATGACTGTCGTGTaGTGCAGAAGGGAGGACCAAAGGACAGCTGGGATC | + |
|
Preference number: 3 (lower is better) Translates to: TRKESTLDMTVV*CRREDQRTAGI Trigger: GATCCCAGCTGTCCTTTGGTCCTCCCTTCTGCAGCACACGACAGTCATGTCCAGTGTTGACTCCTTTCTCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| 3UTR CCA 72 bp | ACAGAGGCAAGGACAAATGTGCAACCAGCTAGGCACTaGCCCTTCAAGGCAGGTTTCTTCTCAGCTCCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: TEARTNVQPARH*PFKAGFFSAPQ Trigger: TTGGGGAGCTGAGAAGAAACCTGCCTTGAAGGGCCAGTGCCTAGCTGGTTGCACATTTGTCCTTGCCTCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| 3UTR CCA 72 bp | ACAACTCCTCCCAGGACCCCTAGGACTCACTTTGGTTaGCACTTAGCATTGCATATCTGGGACCCTTGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: TTPPRTPRTHFG*HLALHIWDPCP Trigger: GGGACAAGGGTCCCAGATATGCAATGCTAAGTGCCAACCAAAGTGAGTCCTAGGGGTCCTGGGAGGAGTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| 3UTR-3UTR CAA 90 bp | CAGGACACCAAAGCCTTAAGCCACAGTATGGGGAAAGGCCCTTGGCTGCCCTGTTTTGCTCTGGAATTTTaGGATAGCAAACAGTCCACG | + |
|
Preference number: 3 (lower is better) Translates to: QDTKALSHSMGKGPWLPCFALEF*DSKQST Trigger: CGTGGACTGTTTGCTATCCAAAAATTCCAGAGCAAA...ACAGGGCAGCCAAGGGCCTTTCCCCATACTGTGGCTTAAGGCTTTGGTGTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| 3UTR CCA 72 bp | ATACGGGCAGCTCTTGGCAGAGGTAGGGAAGGCAACTaGGCATCTGCTTTCTTTGACTTCAACCAGCAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: IRAALGRGREGN*ASAFFDFNQQK Trigger: CTTTTGCTGGTTGAAGTCAAAGAAAGCAGATGCCCAGTTGCCTTCCCTACCTCTGCCAAGAGCTGCCCGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| 3UTR TCA 72 bp | CACAACATGAGGAACTGCACTAAAGGGTCACACCGCTaGTCTAGACTGTCCCCAAACTGTGATGGAGATGCT | + |
|
Preference number: 3 (lower is better) Translates to: HNMRNCTKGSHR*SRLSPNCDGDA Trigger: AGCATCTCCATCACAGTTTGGGGACAGTCTAGATCAGCGGTGTGACCCTTTAGTGCAGTTCCTCATGTTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| 3UTR GCA 72 bp | AAAACAGAAGAGGAGCCAATGGCAGAGGTCTACCTCTaGAGACCACAGACCACCATCACTGGAATAAATCGG | + |
|
Preference number: 3 (lower is better) Translates to: KTEEEPMAEVYL*RPQTTITGINR Trigger: CCGATTTATTCCAGTGATGGTGGTCTGTGGTCTGCAGAGGTAGACCTCTGCCATTGGCTCCTCTTCTGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| 3UTR CCA 72 bp | CACCATCACTGGAATAAATCGGACACTTTACAACAGTaGTTTCTCAACCTGTGGGTTGCAACCCCTTGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: HHHWNKSDTLQQ*FLNLWVATPWG Trigger: CCCCCAAGGGGTTGCAACCCACAGGTTGAGAAACCACTGTTGTAAAGTGTCCGATTTATTCCAGTGATGGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| 3UTR GCA 72 bp | CAGGGTAAGTCAGGAAGAGCTAAGTCCACAGCTAACTaGGGGCTAGAAATCTTGCTAAATGGCTTAGCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: QGKSGRAKSTAN*GLEILLNGLAH Trigger: GTGAGCTAAGCCATTTAGCAAGATTTCTAGCCCGCAGTTAGCTGTGGACTTAGCTCTTCCTGACTTACCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| 3UTR CCA 72 bp | GTTCCAGCAGTGTTAAATTGCCCTTGGCTCTTCACATaGCTTTCTCTTCCTAGGTCAGGGGTTAGCTTACAC | + |
|
Preference number: 3 (lower is better) Translates to: VPAVLNCPWLFT*LSLPRSGVSLH Trigger: GTGTAAGCTAACCCCTGACCTAGGAAGAGAAAGCCATGTGAAGAGCCAAGGGCAATTTAACACTGCTGGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| 3UTR-3UTR CAA 90 bp | CTCTTGGCAGAGGTAGGGAAGGCAACTGGGCATCTGCTTTCTTTGACTTCAACCGCCACCTGTGCATGTTaGAGACAAAAGTTAATCAAC | + |
|
Preference number: 3 (lower is better) Translates to: LLAEVGKATGHLLSLTSTATCAC*RQKLIN Trigger: GTTGATTAACTTTTGTCTCAAACATGCACAGGTGGC...GGTTGAAGTCAAAGAAAGCAGATGCCCAGTTGCCTTCCCTACCTCTGCCAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| 3UTR GCA 72 bp | CTAGGTCAGGGGTTAGCTTACACATCACTCTCCAGATaGCTTCCTAATATCCTACCAAAAGCATCGTCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: LGQGLAYTSLSR*LPNILPKASSL Trigger: CAGAGACGATGCTTTTGGTAGGATATTAGGAAGGCATCTGGAGAGTGATGTGTAAGCTAACCCCTGACCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| 3UTR CCA 72 bp | AGAGGTCTACCTCTGCAGACCACAGACCACCATCACTaGAATAAATCGGACACTTTACAACAGTGGTTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: RGLPLQTTDHHH*NKSDTLQQWFL Trigger: GAGAAACCACTGTTGTAAAGTGTCCGATTTATTCCAGTGATGGTGGTCTGTGGTCTGCAGAGGTAGACCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| 3UTR TCA 72 bp | AAGAAAGCTGTACAAGGTCTGAGGAATAGATTACAGTaGGATGACAGAAGCAGCCTGTCACAAAGCAGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: KKAVQGLRNRLQ*DDRSSLSQSSP Trigger: GGGACTGCTTTGTGACAGGCTGCTTCTGTCATCTCACTGTAATCTATTCCTCAGACCTTGTACAGCTTTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| 3UTR GCA 72 bp | GAGGGTAAGGTGCAAGGAAGCCTGGGTTTAGCAAAGTaGTCAGGCAAAAGCATGACAAGTAATAAGTCTGAT | + |
|
Preference number: 3 (lower is better) Translates to: EGKVQGSLGLAK*SGKSMTSNKSD Trigger: ATCAGACTTATTACTTGTCATGCTTTTGCCTGAGCACTTTGCTAAACCCAGGCTTCCTTGCACCTTACCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| 3UTR CCA 72 bp | CCAGAACTGTCCCAACAGCTCAAGTTTTCTAGTCTGTaGAAACTTCCAGAGAAGGGGCAGTTTATGTACAAG | + |
|
Preference number: 3 (lower is better) Translates to: PELSQQLKFSSL*KLPEKGQFMYK Trigger: CTTGTACATAAACTGCCCCTTCTCTGGAAGTTTCCACAGACTAGAAAACTTGAGCTGTTGGGACAGTTCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| 3UTR TCA 72 bp | GTCACAAAGCAGTCCCACCTTCAACAAATTCTAAACTaGACAAGCATTTTCATCACCACGTGTGGGTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: VTKQSHLQQILN*TSIFITTCGCV Trigger: CACACACCCACACGTGGTGATGAAAATGCTTGTTCAGTTTAGAATTTGTTGAAGGTGGGACTGCTTTGTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| 3UTR TCA 72 bp | CTTTCTTTGACTTCAACCAGCAAAAGCCTACTAACCTaGCTGACTTGGACTCTTAGTCGGGATGAACTGACA | + |
|
Preference number: 3 (lower is better) Translates to: LSLTSTSKSLLT*LTWTLSRDELT Trigger: TGTCAGTTCATCCCGACTAAGAGTCCAAGTCAGTCAGGTTAGTAGGCTTTTGCTGGTTGAAGTCAAAGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| 3UTR GCA 72 bp | CCAGGAATGAACAATACTAGCTTGCCTGCAGGGAAATaGATCGCACTAAGGGAAGAATACAGAATGCATTCA | + |
|
Preference number: 3 (lower is better) Translates to: PGMNNTSLPAGK*IALREEYRMHS Trigger: TGAATGCATTCTGTATTCTTCCCTTAGTGCGATGCATTTCCCTGCAGGCAAGCTAGTATTGTTCATTCCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| 3UTR CCA 72 bp | GATAGTTGCACAGAGAGGTGCAACACACAGGCAAGCTaGAAGGGTCAACTTAGATTGTCTCCTTACTTTATA | + |
|
Preference number: 3 (lower is better) Translates to: DSCTERCNTQAS*KGQLRLSPYFI Trigger: TATAAAGTAAGGAGACAATCTAAGTTGACCCTTCCAGCTTGCCTGTGTGTTGCACCTCTCTGTGCAACTATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| 3UTR TCA 72 bp | TCAAAGTATACCCTGTTTACCTCCTATGCAGACACTTaGGTATGGGTTAAACCAACTGCTCTTAGCAAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: SKYTLFTSYADT*VWVKPTALSKG Trigger: GCCTTTGCTAAGAGCAGTTGGTTTAACCCATACTCAAGTGTCTGCATAGGAGGTAAACAGGGTATACTTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| 3UTR GCA 72 bp | AGCCTTAGAAACATAAAGTTACTTAGTGTTTACCACTaGAACCAGCCAGGAACCTTAAAGCCAGAGAGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: SLRNIKLLSVYH*NQPGTLKPERG Trigger: TCCTCTCTCTGGCTTTAAGGTTCCTGGCTGGTTGCAGTGGTAAACACTAAGTAACTTTATGTTTCTAAGGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| 3UTR TCA 72 bp | ATATGGAAAGCTTTATTGGCGGTAATTGATTTCTTATaGTTTTCACCAGTGCCCGAACACCAGCATACCAGC | + |
|
Preference number: 3 (lower is better) Translates to: IWKALLAVIDFL*FSPVPEHQHTS Trigger: GCTGGTATGCTGGTGTTCGGGCACTGGTGAAAATCATAAGAAATCAATTACCGCCAATAAAGCTTTCCATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| 3UTR TCA 72 bp | GGGATGAGGTATATGGAAAGCTTTATTGGCGGTAATTaGTTTCTTATGATTTTCACCAGTGCCCGAACACCA | + |
|
Preference number: 3 (lower is better) Translates to: GMRYMESFIGGN*FLMIFTSARTP Trigger: TGGTGTTCGGGCACTGGTGAAAATCATAAGAAATCAATTACCGCCAATAAAGCTTTCCATATACCTCATCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| 3UTR TCA 72 bp | TGTGGATTTTCTTGGTTTAGCTCACCTAGAAAGTGCTaGGTGTTACAGATCACTGCCACCAACAAAGAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: CGFSWFSSPRKC*VLQITATNKES Trigger: ACTTTCTTTGTTGGTGGCAGTGATCTGTAACACTCAGCACTTTCTAGGTGAGCTAAACCAAGAAAATCCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| 3UTR-3UTR CAA 90 bp | AACAGCATAGTACTGCAATACTGGGTCTGGACACATTACCTGTACACAACTACTCCTCAAGTGCTGTTTTaGCTCTGGAATTTTTGGATA | + |
|
Preference number: 3 (lower is better) Translates to: NSIVLQYWVWTHYLYTTTPQVLF*LWNFWI Trigger: TATCCAAAAATTCCAGAGCAAAAACAGCACTTGAGG...AGTAGTTGTGTACAGGTAATGTGTCCAGACCCAGTATTGCAGTACTATGCTGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| 3UTR TCA 72 bp | CAGAACAACTGGTTATACACATCAGTTATCATCTGCTaGAGTCTGGTTATTAGACAAAAGGACTTACTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: QNNWLYTSVIIC*SLVIRQKDLLP Trigger: GGGCAGTAAGTCCTTTTGTCTAATAACCAGACTTCAGCAGATGATAACTGATGTGTATAACCAGTTGTTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| 3UTR GCA 72 bp | TGCCTAGACCAAGAAGCAGCACACACACCTCATTTATaGAAACTAAGAATGTATACAAACAGCATAGTACTG | + |
|
Preference number: 3 (lower is better) Translates to: CLDQEAAHTPHL*KLRMYTNSIVL Trigger: CAGTACTATGCTGTTTGTATACATTCTTAGTTTGCATAAATGAGGTGTGTGTGCTGCTTCTTGGTCTAGGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| 3UTR CCA 72 bp | CCCAATTTGAATTCTGCATTTTACCAAGAAATAGGCTaGATCGGTATATGTACATACATGGTTCAGAGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: PNLNSAFYQEIG*IGICTYMVQRP Trigger: TGGCCTCTGAACCATGTATGTACATATACCGATCCAGCCTATTTCTTGGTAAAATGCAGAATTCAAATTGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| 3UTR TCA 72 bp | ATACAATACACTTTAAAAACAGATGGCCCTATCTGCTaGCAAGACCTCAGCGTCACTCTAACACATTTACAA | + |
|
Preference number: 3 (lower is better) Translates to: IQYTLKTDGPIC*QDLSVTLTHLQ Trigger: TTGTAAATGTGTTAGAGTGACGCTGAGGTCTTGTCAGCAGATAGGGCCATCTGTTTTTAAAGTGTATTGTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| 3UTR TCA 72 bp | ATAAGCACTGAATTCTTTTCACATGAGTTTACACGGTaGCTTGTTCACGCTCGGTGGTATAGAAAACCTATT | + |
|
Preference number: 3 (lower is better) Translates to: ISTEFFSHEFTR*LVHARWYRKPI Trigger: AATAGGTTTTCTATACCACCGAGCGTGAACAAGTCACCGTGTAAACTCATGTGAAAAGAATTCAGTGCTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| 3UTR CCA 72 bp | ACTGGTTATACACATCAGTTATCATCTGCTGAAGTCTaGTTATTAGACAAAAGGACTTACTGCCCACACAAA | + |
|
Preference number: 3 (lower is better) Translates to: TGYTHQLSSAEV*LLDKRTYCPHK Trigger: TTTGTGTGGGCAGTAAGTCCTTTTGTCTAATAACCAGACTTCAGCAGATGATAACTGATGTGTATAACCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| 3UTR-3UTR CAA 90 bp | TGGACACATTACCTGTACACAACTACTACTGTTATTAATAACCTTTGGGATACTTTTGCTCTGGAATTTTaGGATAGCAAACAGTCCACG | + |
|
Preference number: 3 (lower is better) Translates to: WTHYLYTTTTVINNLWDTFALEF*DSKQST Trigger: CGTGGACTGTTTGCTATCCAAAAATTCCAGAGCAAA...AGTATCCCAAAGGTTATTAATAACAGTAGTAGTTGTGTACAGGTAATGTGTCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| 3UTR CCA 72 bp | ATGTATACAAACAGCATAGTACTGCAATACTGGGTCTaGACACATTACCTGTACACAACTACTACTGTTATT | + |
|
Preference number: 3 (lower is better) Translates to: MYTNSIVLQYWV*THYLYTTTTVI Trigger: AATAACAGTAGTAGTTGTGTACAGGTAATGTGTCCAGACCCAGTATTGCAGTACTATGCTGTTTGTATACAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| 3UTR-3UTR CAA 90 bp | TTTATGCAAACTAAGAATGTATACAAACAGCATAGTACTGCAATACTGGGTCTGCCTCAAGTGCTGTTTTaGCTCTGGAATTTTTGGATA | + |
|
Preference number: 3 (lower is better) Translates to: FMQTKNVYKQHSTAILGLPQVLF*LWNFWI Trigger: TATCCAAAAATTCCAGAGCAAAAACAGCACTTGAGG...CAGACCCAGTATTGCAGTACTATGCTGTTTGTATACATTCTTAGTTTGCATAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| 3UTR CAA 72 bp | AGGACCCCTAGGACTCACTTTGGTTGGCACTTAGCATaGCATATCTGGGACCCTTGTCCCAGGCATGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RTPRTHFGWHLA*HIWDPCPRHGW Trigger: CCAGCCATGCCTGGGACAAGGGTCCCAGATATGCAATGCTAAGTGCCAACCAAAGTGAGTCCTAGGGGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| 3UTR CAA 72 bp | AAAGGGGGAGGGCTTAAAAACACATACGGGCAGCTCTaGGCAGAGGTAGGGAAGGCAACTGGGCATCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KGGGLKNTYGQL*AEVGKATGHLL Trigger: AAGCAGATGCCCAGTTGCCTTCCCTACCTCTGCCAAGAGCTGCCCGTATGTGTTTTTAAGCCCTCCCCCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| CDS-3UTR GCA 90 bp | AACAGCATAGTACTGCAATACTGGGTCTGGACACATTACCTGTACACAACTACTCTGCTCTCCACCACCTaGTCCTCCAGACCCACCGGC | + |
|
Preference number: 4 (lower is better) Translates to: NSIVLQYWVWTHYLYTTTLLSTT*SSRPTG Trigger: GCCGGTGGGTCTGGAGGAGCAGGTGGTGGAGAGCAG...AGTAGTTGTGTACAGGTAATGTGTCCAGACCCAGTATTGCAGTACTATGCTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR GCA 90 bp | TCGTGTGCTGCAGAAGGGAGGACCAAAGGACAGCTGGGATCTCCTTCCTGCAGATTCGCAGTTTTCGATTaGCTTGAGCTCATGATGACT | + |
|
Preference number: 4 (lower is better) Translates to: SCAAEGRTKGQLGSPSCRFAVFD*LELMMT Trigger: AGTCATCATGAGCTCAAGGCAATCGAAAACTGCGAA...TCTGCAGGAAGGAGATCCCAGCTGTCCTTTGGTCCTCCCTTCTGCAGCACACGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| CDS-3UTR TCA 90 bp | ACAAACAGCATAGTACTGCAATACTGGGTCTGGACACATTACCTGTACACAACTAGTGAGCGAGGGCTGTaGCGCATGGAAGGTCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TNSIVLQYWVWTHYLYTTSERGL*RMEGLS Trigger: GGAGAGACCTTCCATGCGTCACAGCCCTCGCTCACT...AGTTGTGTACAGGTAATGTGTCCAGACCCAGTATTGCAGTACTATGCTGTTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR TCA 90 bp | AACAGCATAGTACTGCAATACTGGGTCTGGACACATTACCTGTACACAACTACTAGTGAGCGAGGGCTGTaGCGCATGGAAGGTCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NSIVLQYWVWTHYLYTTTSERGL*RMEGLS Trigger: GGAGAGACCTTCCATGCGTCACAGCCCTCGCTCACT...AGTAGTTGTGTACAGGTAATGTGTCCAGACCCAGTATTGCAGTACTATGCTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR GCA 90 bp | GTTTTTGCTCTGGAATTTTTGGATAGCAAACAGTCCACGGGATCATACATGAATCTGCTCTCCACCACCTaGTCCTCCAGACCCACCGGC | + |
|
Preference number: 4 (lower is better) Translates to: VFALEFLDSKQSTGSYMNLLSTT*SSRPTG Trigger: GCCGGTGGGTCTGGAGGAGCAGGTGGTGGAGAGCAG...ATTCATGTATGATCCCGTGGACTGTTTGCTATCCAAAAATTCCAGAGCAAAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR CCA 90 bp | GCTTGCCTAGACCAAGAAGCAGCACACACACCTCATTTATGCAAACTAAGAATGGAGGGCTGTGACGCATaGAAGGTCTCTCCAACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ACLDQEAAHTPHLCKLRMEGCDA*KVSPTL Trigger: GAGGGTTGGAGAGACCTTCCATGCGTCACAGCCCTC...CATTCTTAGTTTGCATAAATGAGGTGTGTGTGCTGCTTCTTGGTCTAGGCAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR TCA 90 bp | CCTCACCACCAAATCAACTACTCTCCAGCAAAGAGGACACCTAAGAGAACAACTTTCCGGTGTGAAACCTaGAGACGGCCATCAAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: PHHQINYSPAKRTPKRTTFRCET*RRPSRD Trigger: GTCTCTTGATGGCCGTCTTCAGGTTTCACACCGGAA...AGTTGTTCTCTTAGGTGTCCTCTTTGCTGGAGAGTAGTTGATTTGGTGGTGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| CDS-3UTR TCA 90 bp | ACTAAGCCCAACTCCAGAGCCAGGACATGGTCCCAGAATCACATTGGCTGGGTAAGTTTTCGATTGCCTTaGGCTCATGATGACTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TKPNSRARTWSQNHIGWVSFRLP*AHDDCE Trigger: TTCACAGTCATCATGAGCTCAAGGCAATCGAAAACT...TACCCAGCCAATGTGATTCTGGGACCATGTCCTGGCTCTGGAGTTGGGCTTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| CDS-3UTR GCA 90 bp | CCTCACCACCAAATCAACTACTCTCCAGCAAAGAGGACACCTAAGAGAACAACTTCTTCCTGTCCATTCTaGTCTCCACCACCTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PHHQINYSPAKRTPKRTTSSCPF*SPPPAP Trigger: AGGAGCAGGTGGTGGAGAGCAGAATGGACAGGAAGA...AGTTGTTCTCTTAGGTGTCCTCTTTGCTGGAGAGTAGTTGATTTGGTGGTGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| CDS-3UTR TCA 90 bp | TATAAAGGCTTGCCTAGACCAAGAAGCAGCACACACACCTCATTTATGCAAACTTCACCACTGGCGGAGTaGATGGCAAGATGGACGACA | + |
|
Preference number: 4 (lower is better) Translates to: YKGLPRPRSSTHTSFMQTSPLAE*MARWTT Trigger: TGTCGTCCATCTTGCCATTCACTCCGCCAGTGGTGA...AGTTTGCATAAATGAGGTGTGTGTGCTGCTTCTTGGTCTAGGCAAGCCTTTATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR TCA 90 bp | CTCTTGGCAGAGGTAGGGAAGGCAACTGGGCATCTGCTTTCTTTGACTTCAACCTGCAAATCCAAGCTGTaGTTAACAGGAGAGAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LLAEVGKATGHLLSLTSTCKSKL*LTGERV Trigger: TACTCTCTCTCCTGTTAATCACAGCTTGGATTTGCA...GGTTGAAGTCAAAGAAAGCAGATGCCCAGTTGCCTTCCCTACCTCTGCCAAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| CDS-3UTR GCA 90 bp | CTCTTGGCAGAGGTAGGGAAGGCAACTGGGCATCTGCTTTCTTTGACTTCAACCTTACAGTTGGGGCTCTaGACAAAGATTGCACTATCA | + |
|
Preference number: 4 (lower is better) Translates to: LLAEVGKATGHLLSLTSTLQLGL*TKIALS Trigger: TGATAGTGCAATCTTTGTGCAGAGCCCCAACTGTAA...GGTTGAAGTCAAAGAAAGCAGATGCCCAGTTGCCTTCCCTACCTCTGCCAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| CDS-3UTR TCA 90 bp | TTTATAAAGGCTTGCCTAGACCAAGAAGCAGCACACACACCTCATTTATGCAAATCACCACTGGCGGAGTaGATGGCAAGATGGACGACA | + |
|
Preference number: 4 (lower is better) Translates to: FIKACLDQEAAHTPHLCKSPLAE*MARWTT Trigger: TGTCGTCCATCTTGCCATTCACTCCGCCAGTGGTGA...TTTGCATAAATGAGGTGTGTGTGCTGCTTCTTGGTCTAGGCAAGCCTTTATAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR TCA 90 bp | TATAAAGGCTTGCCTAGACCAAGAAGCAGCACACACACCTCATTTATGCAAACTTTCCGGTGTGAAACCTaGAGACGGCCATCAAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: YKGLPRPRSSTHTSFMQTFRCET*RRPSRD Trigger: GTCTCTTGATGGCCGTCTTCAGGTTTCACACCGGAA...AGTTTGCATAAATGAGGTGTGTGTGCTGCTTCTTGGTCTAGGCAAGCCTTTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR GCA 90 bp | TATAAAGGCTTGCCTAGACCAAGAAGCAGCACACACACCTCATTTATGCAAACTCACACTGTTGCAGGGTaGCAGCCGTATCTCTGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: YKGLPRPRSSTHTSFMQTHTVAG*QPYLWL Trigger: TAACCAGAGATACGGCTGGCACCCTGCAACAGTGTG...AGTTTGCATAAATGAGGTGTGTGTGCTGCTTCTTGGTCTAGGCAAGCCTTTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR CCA 90 bp | TATAAAGGCTTGCCTAGACCAAGAAGCAGCACACACACCTCATTTATGCAAACTGACTGGAGGCAAGACTaGGGTCTCAACTCTCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: YKGLPRPRSSTHTSFMQTDWRQD*GLNSLV Trigger: TACCAGAGAGTTGAGACCCCAGTCTTGCCTCCAGTC...AGTTTGCATAAATGAGGTGTGTGTGCTGCTTCTTGGTCTAGGCAAGCCTTTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR TCA 90 bp | AGTCTGGTTATTAGACAAAAGGACTTACTGCCCACACAAACCTTTCCTGGACTCCCTGTTGTGTCCCACTaGTCTACCGTATTTGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SLVIRQKDLLPTQTFPGLPVVSH*STVFAV Trigger: TACAGCAAATACGGTAGATCAGTGGGACACAACAGG...GAGTCCAGGAAAGGTTTGTGTGGGCAGTAAGTCCTTTTGTCTAATAACCAGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| 3UTR CAA 72 bp | ATAAGGCTCCTTAAGGACAATGCACTTGTAGCTCTCTaGCTAAAGGCTAACCAGCTGGAAGCTGGGAAATAC | + |
|
Preference number: 4 (lower is better) Translates to: IRLLKDNALVAL*LKANQLEAGKY Trigger: GTATTTCCCAGCTTCCAGCTGGTTAGCCTTTAGCAAGAGAGCTACAAGTGCATTGTCCTTAAGGAGCCTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| CDS-3UTR GCA 90 bp | GTTTTTGCTCTGGAATTTTTGGATAGCAAACAGTCCACGGGATCATACATGAATCACACTGTTGCAGGGTaGCAGCCGTATCTCTGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: VFALEFLDSKQSTGSYMNHTVAG*QPYLWL Trigger: TAACCAGAGATACGGCTGGCACCCTGCAACAGTGTG...ATTCATGTATGATCCCGTGGACTGTTTGCTATCCAAAAATTCCAGAGCAAAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR GCA 90 bp | TGTAATTTTATAAAGGCTTGCCTAGACCAAGAAGCAGCACACACACCTCATTTACTGCCTCCGATATTCTaGTCCCCAGCCCTTCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: CNFIKACLDQEAAHTPHLLPPIF*SPALHK Trigger: TTTGTGAAGGGCTGGGGAGCAGAATATCGGAGGCAG...TAAATGAGGTGTGTGTGCTGCTTCTTGGTCTAGGCAAGCCTTTATAAAATTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR CCA 90 bp | ACAAACAGCATAGTACTGCAATACTGGGTCTGGACACATTACCTGTACACAACTAAGTCTCTTCACCACTaGCGGAGTGAATGGCAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: TNSIVLQYWVWTHYLYTTKSLHH*RSEWQD Trigger: ATCTTGCCATTCACTCCGCCAGTGGTGAAGAGACTT...AGTTGTGTACAGGTAATGTGTCCAGACCCAGTATTGCAGTACTATGCTGTTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR CCA 90 bp | AACAGCATAGTACTGCAATACTGGGTCTGGACACATTACCTGTACACAACTACTGGCCATCAAGAGACCTaGTTTGTTCAGAGAAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NSIVLQYWVWTHYLYTTTGHQET*FVQRSC Trigger: ACAGCTTCTCTGAACAAACCAGGTCTCTTGATGGCC...AGTAGTTGTGTACAGGTAATGTGTCCAGACCCAGTATTGCAGTACTATGCTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR CCA 90 bp | TATAAAGGCTTGCCTAGACCAAGAAGCAGCACACACACCTCATTTATGCAAACTGGCCATCAAGAGACCTaGTTTGTTCAGAGAAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: YKGLPRPRSSTHTSFMQTGHQET*FVQRSC Trigger: ACAGCTTCTCTGAACAAACCAGGTCTCTTGATGGCC...AGTTTGCATAAATGAGGTGTGTGTGCTGCTTCTTGGTCTAGGCAAGCCTTTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR CCA 90 bp | TTTATGCAAACTAAGAATGTATACAAACAGCATAGTACTGCAATACTGGGTCTGGAGGGCTGTGACGCATaGAAGGTCTCTCCAACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FMQTKNVYKQHSTAILGLEGCDA*KVSPTL Trigger: GAGGGTTGGAGAGACCTTCCATGCGTCACAGCCCTC...CAGACCCAGTATTGCAGTACTATGCTGTTTGTATACATTCTTAGTTTGCATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR CCA 90 bp | GCTTGCCTAGACCAAGAAGCAGCACACACACCTCATTTATGCAAACTAAGAATGATCTCTGGTTACAGTTaGGGCTCTGCACAAAGATTG | + |
|
Preference number: 4 (lower is better) Translates to: ACLDQEAAHTPHLCKLRMISGYS*GSAQRL Trigger: CAATCTTTGTGCAGAGCCCCAACTGTAACCAGAGAT...CATTCTTAGTTTGCATAAATGAGGTGTGTGTGCTGCTTCTTGGTCTAGGCAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| 3UTR CAA 72 bp | TGCAACACACAGGCAAGCTGGAAGGGTCAACTTAGATaGTCTCCTTACTTTATACCTCACCACCAAATCAAC | + |
|
Preference number: 4 (lower is better) Translates to: CNTQASWKGQLR*SPYFIPHHQIN Trigger: GTTGATTTGGTGGTGAGGTATAAAGTAAGGAGACAATCTAAGTTGACCCTTCCAGCTTGCCTGTGTGTTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| 3UTR CAA 72 bp | CAAGTACATTTAGTGGTAGTGTATCAGACTTCACTCTaGAAACCCACTTTCAGACAAGACGTCCCGAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QVHLVVVYQTSL*KPTFRQDVPSL Trigger: GAGACTCGGGACGTCTTGTCTGAAAGTGGGTTTCAAGAGTGAAGTCTGATACACTACCACTAAATGTACTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| CDS-3UTR TCA 90 bp | TATACAAACAGCATAGTACTGCAATACTGGGTCTGGACACATTACCTGTACACAGAAGGGGATCCCATCTaGGTTAATACTTTGTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: YTNSIVLQYWVWTHYLYTEGDPI*VNTLSS Trigger: GCTGGACAAAGTATTAACTCAGATGGGATCCCCTTC...TGTGTACAGGTAATGTGTCCAGACCCAGTATTGCAGTACTATGCTGTTTGTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR GCA 90 bp | TACTGGGTCTGGACACATTACCTGTACACAACTACTACTGTTATTAATAACCTTTCTTCCTGTCCATTCTaGTCTCCACCACCTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: YWVWTHYLYTTTTVINNLSSCPF*SPPPAP Trigger: AGGAGCAGGTGGTGGAGAGCAGAATGGACAGGAAGA...AAGGTTATTAATAACAGTAGTAGTTGTGTACAGGTAATGTGTCCAGACCCAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR CCA 90 bp | TTTATAAAGGCTTGCCTAGACCAAGAAGCAGCACACACACCTCATTTATGCAAACTTCAGGTTACAGCCTaGTGGGATCTTACACACTGT | + |
|
Preference number: 4 (lower is better) Translates to: FIKACLDQEAAHTPHLCKLQVTA*WDLTHC Trigger: ACAGTGTGTAAGATCCCACCAGGCTGTAACCTGAAG...TTTGCATAAATGAGGTGTGTGTGCTGCTTCTTGGTCTAGGCAAGCCTTTATAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| 3UTR CAA 72 bp | AAGTTTACAAAAAGGAGACCAGGCATTTGTACGGAGTaGCAAACGAGAAAGGAGTCAACACTGGACATGACT | + |
|
Preference number: 4 (lower is better) Translates to: KFTKRRPGICTE*QTRKESTLDMT Trigger: AGTCATGTCCAGTGTTGACTCCTTTCTCGTTTGCAACTCCGTACAAATGCCTGGTCTCCTTTTTGTAAACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| 3UTR CAA 72 bp | GCACTGAATTCTTTTCACATGAGTTTACACGGTGACTaGTTCACGCTCGGTGGTATAGAAAACCTATTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ALNSFHMSLHGD*FTLGGIENLFL Trigger: CAGGAATAGGTTTTCTATACCACCGAGCGTGAACAAGTCACCGTGTAAACTCATGTGAAAAGAATTCAGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| 3UTR CAA 72 bp | TCGGTATATGTACATACATGGTTCAGAGGCCAGGGGTaGGTTAGTTATTCTCGTGATTTAAACCAGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SVYVHTWFRGQG*VSYSRDLNQSL Trigger: CAGAGACTGGTTTAAATCACGAGAATAACTAACCAACCCCTGGCCTCTGAACCATGTATGTACATATACCGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| CDS-3UTR TCA 90 bp | ACAAACAGCATAGTACTGCAATACTGGGTCTGGACACATTACCTGTACACAACTTTCATAGTATGCGATTaGACACCAGAATGCAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TNSIVLQYWVWTHYLYTTFIVCD*TPECRF Trigger: GAACCTGCATTCTGGTGTTCAATCGCATACTATGAA...AGTTGTGTACAGGTAATGTGTCCAGACCCAGTATTGCAGTACTATGCTGTTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR GCA 90 bp | AACAGCATAGTACTGCAATACTGGGTCTGGACACATTACCTGTACACAACTACTTTACAGTTGGGGCTCTaGACAAAGATTGCACTATCA | + |
|
Preference number: 4 (lower is better) Translates to: NSIVLQYWVWTHYLYTTTLQLGL*TKIALS Trigger: TGATAGTGCAATCTTTGTGCAGAGCCCCAACTGTAA...AGTAGTTGTGTACAGGTAATGTGTCCAGACCCAGTATTGCAGTACTATGCTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR GCA 90 bp | AAACTAAGAATGTATACAAACAGCATAGTACTGCAATACTGGGTCTGGACACATGATCTTACACACTGTTaGAGGGTGCCAGCCGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: KLRMYTNSIVLQYWVWTHDLTHC*RVPAVS Trigger: AGATACGGCTGGCACCCTGCAACAGTGTGTAAGATC...ATGTGTCCAGACCCAGTATTGCAGTACTATGCTGTTTGTATACATTCTTAGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR GCA 90 bp | TGGACACATTACCTGTACACAACTACTACTGTTATTAATAACCTTTGGGATACTCTGCCTCCGATATTCTaGTCCCCAGCCCTTCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: WTHYLYTTTTVINNLWDTLPPIF*SPALHK Trigger: TTTGTGAAGGGCTGGGGAGCAGAATATCGGAGGCAG...AGTATCCCAAAGGTTATTAATAACAGTAGTAGTTGTGTACAGGTAATGTGTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR CCA 90 bp | GTTTTTGCTCTGGAATTTTTGGATAGCAAACAGTCCACGGGATCATACATGAATAAGTCTCTTCACCACTaGCGGAGTGAATGGCAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VFALEFLDSKQSTGSYMNKSLHH*RSEWQD Trigger: ATCTTGCCATTCACTCCGCCAGTGGTGAAGAGACTT...ATTCATGTATGATCCCGTGGACTGTTTGCTATCCAAAAATTCCAGAGCAAAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR CCA 90 bp | ACAAACAGCATAGTACTGCAATACTGGGTCTGGACACATTACCTGTACACAACTTTGTGTTTTCTGGAATaGAGTGGGTGTAGTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: TNSIVLQYWVWTHYLYTTLCFLE*SGCSHP Trigger: TGGATGACTACACCCACTCCATTCCAGAAAACACAA...AGTTGTGTACAGGTAATGTGTCCAGACCCAGTATTGCAGTACTATGCTGTTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR CCA 90 bp | AACAGCATAGTACTGCAATACTGGGTCTGGACACATTACCTGTACACAACTACTCCTGTGTCCATACTTTaGTTCAACTGTTGGTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: NSIVLQYWVWTHYLYTTTPVSIL*FNCWSL Trigger: AAGTGACCAACAGTTGAACCAAAGTATGGACACAGG...AGTAGTTGTGTACAGGTAATGTGTCCAGACCCAGTATTGCAGTACTATGCTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR CCA 90 bp | TATACAAACAGCATAGTACTGCAATACTGGGTCTGGACACATTACCTGTACACAATCTCTGGTTACAGTTaGGGCTCTGCACAAAGATTG | + |
|
Preference number: 4 (lower is better) Translates to: YTNSIVLQYWVWTHYLYTISGYS*GSAQRL Trigger: CAATCTTTGTGCAGAGCCCCAACTGTAACCAGAGAT...TGTGTACAGGTAATGTGTCCAGACCCAGTATTGCAGTACTATGCTGTTTGTATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| 3UTR CAA 72 bp | GATGAGACCTCAAGTGCTGTTTTTGCTCTGGAATTTTaGGATAGCAAACAGTCCACGGGATCATACATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: DETSSAVFALEF*DSKQSTGSYMN Trigger: ATTCATGTATGATCCCGTGGACTGTTTGCTATCCAAAAATTCCAGAGCAAAAACAGCACTTGAGGTCTCATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| 3UTR CAA 72 bp | CAACTGCTCTTAGCAAAGGCAGGAACTATAGCTATCTaGTTCACCTTCACCCAAAAGTTAAGGAAGTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: QLLLAKAGTIAI*FTFTQKLRKFM Trigger: CATGAACTTCCTTAACTTTTGGGTGAAGGTGAACAAGATAGCTATAGTTCCTGCCTTTGCTAAGAGCAGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| CDS-3UTR TCA 90 bp | AAACTAAGAATGTATACAAACAGCATAGTACTGCAATACTGGGTCTGGACACATCCTGTTGTGTCCCACTaGTCTACCGTATTTGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: KLRMYTNSIVLQYWVWTHPVVSH*STVFAV Trigger: TACAGCAAATACGGTAGATCAGTGGGACACAACAGG...ATGTGTCCAGACCCAGTATTGCAGTACTATGCTGTTTGTATACATTCTTAGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR TCA 90 bp | AGCAGCACACACACCTCATTTATGCAAACTAAGAATGTATACAAACAGCATAGTAGAGGGCCATTCAGATaGAGTTCAATCCAGCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSTHTSFMQTKNVYKQHSRGPFR*SSIQQG Trigger: TCCTTGCTGGATTGAACTTCATCTGAATGGCCCTCT...ACTATGCTGTTTGTATACATTCTTAGTTTGCATAAATGAGGTGTGTGTGCTGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR TCA 90 bp | AAACTAAGAATGTATACAAACAGCATAGTACTGCAATACTGGGTCTGGACACATAGAGGGCCATTCAGATaGAGTTCAATCCAGCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KLRMYTNSIVLQYWVWTHRGPFR*SSIQQG Trigger: TCCTTGCTGGATTGAACTTCATCTGAATGGCCCTCT...ATGTGTCCAGACCCAGTATTGCAGTACTATGCTGTTTGTATACATTCTTAGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR GCA 90 bp | TTTGGGATACTGTCTTATGCCCAACAAGACATCATTAAGTCTTTAAGTCTTCTTGATCTTACACACTGTTaGAGGGTGCCAGCCGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: FGILSYAQQDIIKSLSLLDLTHC*RVPAVS Trigger: AGATACGGCTGGCACCCTGCAACAGTGTGTAAGATC...AAGAAGACTTAAAGACTTAATGATGTCTTGTTGGGCATAAGACAGTATCCCAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR GCA 90 bp | AACAGCATAGTACTGCAATACTGGGTCTGGACACATTACCTGTACACAACTACTAACTCATTCTTATGGTaGACATTCGGGTTAGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: NSIVLQYWVWTHYLYTTTNSFLW*TFGLAD Trigger: ATCAGCTAACCCGAATGTGCACCATAAGAATGAGTT...AGTAGTTGTGTACAGGTAATGTGTCCAGACCCAGTATTGCAGTACTATGCTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR CCA 90 bp | AAACTAAGAATGTATACAAACAGCATAGTACTGCAATACTGGGTCTGGACACATCTTCAGGTTACAGCCTaGTGGGATCTTACACACTGT | + |
|
Preference number: 4 (lower is better) Translates to: KLRMYTNSIVLQYWVWTHLQVTA*WDLTHC Trigger: ACAGTGTGTAAGATCCCACCAGGCTGTAACCTGAAG...ATGTGTCCAGACCCAGTATTGCAGTACTATGCTGTTTGTATACATTCTTAGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR CCA 90 bp | TATAAAGGCTTGCCTAGACCAAGAAGCAGCACACACACCTCATTTATGCAAACTCAAAACTCATTCTTATaGTGCACATTCGGGTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: YKGLPRPRSSTHTSFMQTQNSFL*CTFGLA Trigger: AGCTAACCCGAATGTGCACCATAAGAATGAGTTTTG...AGTTTGCATAAATGAGGTGTGTGTGCTGCTTCTTGGTCTAGGCAAGCCTTTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR TCA 90 bp | AAACTAAGAATGTATACAAACAGCATAGTACTGCAATACTGGGTCTGGACACATTGCAATTCTGAGTGGTaGTGGCTTTCTCAAGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KLRMYTNSIVLQYWVWTHCNSEW*WLSQAH Trigger: ATGAGCTTGAGAAAGCCATCACCACTCAGAATTGCA...ATGTGTCCAGACCCAGTATTGCAGTACTATGCTGTTTGTATACATTCTTAGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR TCA 90 bp | TTTGGGATACTGTCTTATGCCCAACAAGACATCATTAAGTCTTTAAGTCTTCTTGAAGGGGATCCCATCTaGGTTAATACTTTGTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FGILSYAQQDIIKSLSLLEGDPI*VNTLSS Trigger: GCTGGACAAAGTATTAACTCAGATGGGATCCCCTTC...AAGAAGACTTAAAGACTTAATGATGTCTTGTTGGGCATAAGACAGTATCCCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR GCA 90 bp | GTTTTTGCTCTGGAATTTTTGGATAGCAAACAGTCCACGGGATCATACATGAATCTGATCTACCGTATTTaGTGTACTCAGTCCCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: VFALEFLDSKQSTGSYMNLIYRI*CTQSPN Trigger: ATTTGGGGACTGAGTACAGCAAATACGGTAGATCAG...ATTCATGTATGATCCCGTGGACTGTTTGCTATCCAAAAATTCCAGAGCAAAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR GCA 90 bp | TTTATAAAGGCTTGCCTAGACCAAGAAGCAGCACACACACCTCATTTATGCAAAAACTCATTCTTATGGTaGACATTCGGGTTAGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: FIKACLDQEAAHTPHLCKNSFLW*TFGLAD Trigger: ATCAGCTAACCCGAATGTGCACCATAAGAATGAGTT...TTTGCATAAATGAGGTGTGTGTGCTGCTTCTTGGTCTAGGCAAGCCTTTATAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR TCA 90 bp | TTTGGGATACTGTCTTATGCCCAACAAGACATCATTAAGTCTTTAAGTCTTCTTTGCAATTCTGAGTGGTaGTGGCTTTCTCAAGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: FGILSYAQQDIIKSLSLLCNSEW*WLSQAH Trigger: ATGAGCTTGAGAAAGCCATCACCACTCAGAATTGCA...AAGAAGACTTAAAGACTTAATGATGTCTTGTTGGGCATAAGACAGTATCCCAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR GCA 90 bp | AGCAGCACACACACCTCATTTATGCAAACTAAGAATGTATACAAACAGCATAGTTTCGCAGTTTTCGATTaGCTTGAGCTCATGATGACT | + |
|
Preference number: 4 (lower is better) Translates to: SSTHTSFMQTKNVYKQHSFAVFD*LELMMT Trigger: AGTCATCATGAGCTCAAGGCAATCGAAAACTGCGAA...ACTATGCTGTTTGTATACATTCTTAGTTTGCATAAATGAGGTGTGTGTGCTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR CCA 90 bp | AAACTAAGAATGTATACAAACAGCATAGTACTGCAATACTGGGTCTGGACACATGATGTAATTACTCTGTaGCTCAATTCCTGCTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KLRMYTNSIVLQYWVWTHDVITL*LNSCWE Trigger: TTCCCAGCAGGAATTGAGCCACAGAGTAATTACATC...ATGTGTCCAGACCCAGTATTGCAGTACTATGCTGTTTGTATACATTCTTAGTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR CCA 90 bp | AGCAGCACACACACCTCATTTATGCAAACTAAGAATGTATACAAACAGCATAGTGATGTAATTACTCTGTaGCTCAATTCCTGCTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SSTHTSFMQTKNVYKQHSDVITL*LNSCWE Trigger: TTCCCAGCAGGAATTGAGCCACAGAGTAATTACATC...ACTATGCTGTTTGTATACATTCTTAGTTTGCATAAATGAGGTGTGTGTGCTGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR CCA 90 bp | ACTGGGTCTGGACACATTACCTGTACACAACTACTACTGTTATTAATAACCTTTCCTGTGTCCATACTTTaGTTCAACTGTTGGTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: TGSGHITCTQLLLLLITFPVSIL*FNCWSL Trigger: AAGTGACCAACAGTTGAACCAAAGTATGGACACAGG...AAAGGTTATTAATAACAGTAGTAGTTGTGTACAGGTAATGTGTCCAGACCCAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR CCA 90 bp | TGGACACATTACCTGTACACAACTACTACTGTTATTAATAACCTTTGGGATACTTTCCGAGTAAGTAACTaGCTGCAAATCCAAGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: WTHYLYTTTTVINNLWDTFRVSN*LQIQAV Trigger: CACAGCTTGGATTTGCAGCCAGTTACTTACTCGGAA...AGTATCCCAAAGGTTATTAATAACAGTAGTAGTTGTGTACAGGTAATGTGTCCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR CCA 90 bp | TTTATGCAAACTAAGAATGTATACAAACAGCATAGTACTGCAATACTGGGTCTGTTCCGAGTAAGTAACTaGCTGCAAATCCAAGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FMQTKNVYKQHSTAILGLFRVSN*LQIQAV Trigger: CACAGCTTGGATTTGCAGCCAGTTACTTACTCGGAA...CAGACCCAGTATTGCAGTACTATGCTGTTTGTATACATTCTTAGTTTGCATAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR TCA 90 bp | GAAGCAGCACACACACCTCATTTATGCAAACTAAGAATGTATACAAACAGCATATTAGTATTGCAATTCTaGGTGGTGATGGCTTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: EAAHTPHLCKLRMYTNSILVLQF*VVMAFS Trigger: TGAGAAAGCCATCACCACTCAGAATTGCAATACTAA...TATGCTGTTTGTATACATTCTTAGTTTGCATAAATGAGGTGTGTGTGCTGCTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR TCA 90 bp | TTTATGCAAACTAAGAATGTATACAAACAGCATAGTACTGCAATACTGGGTCTGAGTTTTCGATTGCCTTaGGCTCATGATGACTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: FMQTKNVYKQHSTAILGLSFRLP*AHDDCE Trigger: TTCACAGTCATCATGAGCTCAAGGCAATCGAAAACT...CAGACCCAGTATTGCAGTACTATGCTGTTTGTATACATTCTTAGTTTGCATAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR TCA 90 bp | TTTGGGATACTGTCTTATGCCCAACAAGACATCATTAAGTCTTTAAGTCTTCTTTGCAAATCCAAGCTGTaGTTAACAGGAGAGAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: FGILSYAQQDIIKSLSLLCKSKL*LTGERV Trigger: TACTCTCTCTCCTGTTAATCACAGCTTGGATTTGCA...AAGAAGACTTAAAGACTTAATGATGTCTTGTTGGGCATAAGACAGTATCCCAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR TCA 90 bp | TTTATGCAAACTAAGAATGTATACAAACAGCATAGTACTGCAATACTGGGTCTGTTCATAGTATGCGATTaGACACCAGAATGCAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FMQTKNVYKQHSTAILGLFIVCD*TPECRF Trigger: GAACCTGCATTCTGGTGTTCAATCGCATACTATGAA...CAGACCCAGTATTGCAGTACTATGCTGTTTGTATACATTCTTAGTTTGCATAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR CCA 90 bp | TGGACACATTACCTGTACACAACTACTACTGTTATTAATAACCTTTGGGATACTTTGTGTTTTCTGGAATaGAGTGGGTGTAGTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: WTHYLYTTTTVINNLWDTLCFLE*SGCSHP Trigger: TGGATGACTACACCCACTCCATTCCAGAAAACACAA...AGTATCCCAAAGGTTATTAATAACAGTAGTAGTTGTGTACAGGTAATGTGTCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR CCA 90 bp | TACTGGGTCTGGACACATTACCTGTACACAACTACTACTGTTATTAATAACCTTCAAAACTCATTCTTATaGTGCACATTCGGGTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: YWVWTHYLYTTTTVINNLQNSFL*CTFGLA Trigger: AGCTAACCCGAATGTGCACCATAAGAATGAGTTTTG...AAGGTTATTAATAACAGTAGTAGTTGTGTACAGGTAATGTGTCCAGACCCAGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR CCA 90 bp | TGGACACATTACCTGTACACAACTACTACTGTTATTAATAACCTTTGGGATACTGAAATTTGTGTTTTCTaGAATGGAGTGGGTGTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: WTHYLYTTTTVINNLWDTEICVF*NGVGVV Trigger: GACTACACCCACTCCATTCCAGAAAACACAAATTTC...AGTATCCCAAAGGTTATTAATAACAGTAGTAGTTGTGTACAGGTAATGTGTCCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR CCA 90 bp | TTTGGGATACTGTCTTATGCCCAACAAGACATCATTAAGTCTTTAAGTCTTCTTGAAATTTGTGTTTTCTaGAATGGAGTGGGTGTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: FGILSYAQQDIIKSLSLLEICVF*NGVGVV Trigger: GACTACACCCACTCCATTCCAGAAAACACAAATTTC...AAGAAGACTTAAAGACTTAATGATGTCTTGTTGGGCATAAGACAGTATCCCAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| 3UTR CAA 72 bp | AGCCCTGAAAATAATTATACTGCCACCTGTGCATGTTaGAGACAAAAGTTAATCAACAGAACAACTGGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: SPENNYTATCAC*RQKLINRTTGY Trigger: ATAACCAGTTGTTCTGTTGATTAACTTTTGTCTCAAACATGCACAGGTGGCAGTATAATTATTTTCAGGGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| 3UTR CAA 72 bp | TACACTAATCAGAGCGTTTTCCAACACGCTAAAGCTTaGTATCTGTTCTTATGTTGCGTATTTGGTTGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: YTNQSVFQHAKA*YLFLCCVFGCL Trigger: TAAACAACCAAATACGCAACATAAGAACAGATACAAAGCTTTAGCGTGTTGGAAAACGCTCTGATTAGTGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| CDS-3UTR CAA 90 bp | CAGGACACCAAAGCCTTAAGCCACAGTATGGGGAAAGGCCCTTGGCTGCCCTGTACTGATCTACCGTATTaGCTGTACTCAGTCCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: QDTKALSHSMGKGPWLPCTDLPY*LYSVPK Trigger: TTTGGGGACTGAGTACAGCAAATACGGTAGATCAGT...ACAGGGCAGCCAAGGGCCTTTCCCCATACTGTGGCTTAAGGCTTTGGTGTCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| CDS-3UTR CAA 90 bp | GCCAATGGCAGAGGTCTACCTCTGCAGACCACAGACCACCATCACTGGAATAAAGGCTCTGCACAAAGATaGCACTATCACTTAGGCACT | + |
|
Preference number: 5 (lower is better) Translates to: ANGRGLPLQTTDHHHWNKGSAQR*HYHLGT Trigger: AGTGCCTAAGTGATAGTGCAATCTTTGTGCAGAGCC...TTTATTCCAGTGATGGTGGTCTGTGGTCTGCAGAGGTAGACCTCTGCCATTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| CDS GCA 90 bp | AGAGAAGCTGTAAAGGCCTGTTGTGTCCCACTGATCTACCGTATTTaGTGTACTCAGTCCCCAAATTTCAGAGCAAGTGCTTGGTATGGT | + |
|
Preference number: 5 (lower is better) Translates to: REAVKACCVPLIYRI*CTQSPNFRASAWYG Trigger: ACCATACCAAGCACTTGCTCTGAAATTTGGGGACTGAGTACAGCAAATACGGTAGATCAGTGGGACACAACAGGCCTTTACAGCTTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 ENSMUST00000171256.8 |
||
| CDS-3UTR CAA 90 bp | AACAGCATAGTACTGCAATACTGGGTCTGGACACATTACCTGTACACAACTACTAGCTGTAAAGGCCTGTaGTGTCCCACTGATCTACCG | + |
|
Preference number: 5 (lower is better) Translates to: NSIVLQYWVWTHYLYTTTSCKGL*CPTDLP Trigger: CGGTAGATCAGTGGGACACAACAGGCCTTTACAGCT...AGTAGTTGTGTACAGGTAATGTGTCCAGACCCAGTATTGCAGTACTATGCTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS GCA 90 bp | AGGTGGTGGTGTTTCTGGGATGTAATTACTCTGTGGCTCAATTCCTaGTGGGAAATTTGTGTTTTCTGGAATGGAGTGGGTGTAGTCATC | + |
|
Preference number: 5 (lower is better) Translates to: RWWCFWDVITLWLNS*WEICVFWNGVGVVI Trigger: GATGACTACACCCACTCCATTCCAGAAAACACAAATTTCCCAGCAGGAATTGAGCCACAGAGTAATTACATCCCAGAAACACCACCACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025453.15 ENSMUST00000091831.13 ENSMUST00000113930.3 ENSMUST00000168423.9 ENSMUST00000171256.8 |
||
| CDS CCA 90 bp | TGGTGGTGTTTCTGGGATGTAATTACTCTGTGGCTCAATTCCTGCTaGGAAATTTGTGTTTTCTGGAATGGAGTGGGTGTAGTCATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: WWCFWDVITLWLNSC*EICVFWNGVGVVIQ Trigger: CTGGATGACTACACCCACTCCATTCCAGAAAACACAAATTTCCCAGCAGGAATTGAGCCACAGAGTAATTACATCCCAGAAACACCACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025453.15 ENSMUST00000091831.13 ENSMUST00000113930.3 ENSMUST00000168423.9 ENSMUST00000171256.8 |
||
| CDS-3UTR CAA 90 bp | GCTTGCCTAGACCAAGAAGCAGCACACACACCTCATTTATGCAAACTAAGAATGGCCTGTGTCCATACTTaGGTTCAACTGTTGGTCACT | + |
|
Preference number: 5 (lower is better) Translates to: ACLDQEAAHTPHLCKLRMACVHT*VQLLVT Trigger: AGTGACCAACAGTTGAACCAAAGTATGGACACAGGC...CATTCTTAGTTTGCATAAATGAGGTGTGTGTGCTGCTTCTTGGTCTAGGCAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR CAA 90 bp | AACAGCATAGTACTGCAATACTGGGTCTGGACACATTACCTGTACACAACTACTTCCAGCAAGGAGTACTaGTTACTGTCTGCCTCCGAT | + |
|
Preference number: 5 (lower is better) Translates to: NSIVLQYWVWTHYLYTTTSSKEY*LLSASD Trigger: ATCGGAGGCAGACAGTAACAAGTACTCCTTGCTGGA...AGTAGTTGTGTACAGGTAATGTGTCCAGACCCAGTATTGCAGTACTATGCTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR CAA 90 bp | TTTATAAAGGCTTGCCTAGACCAAGAAGCAGCACACACACCTCATTTATGCAAAGCATTTCGGTTAACGTaGGAGAGCAAGCCTAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: FIKACLDQEAAHTPHLCKAFRLT*ESKPKQ Trigger: CTGCTTAGGCTTGCTCTCCAACGTTAACCGAAATGC...TTTGCATAAATGAGGTGTGTGTGCTGCTTCTTGGTCTAGGCAAGCCTTTATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR CAA 90 bp | TCTCAAAGTATACCCTGTTTACCTCCTATGCAGACACTTGAGTATGGGTTAAACGCATTTCGGTTAACGTaGGAGAGCAAGCCTAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SQSIPCLPPMQTLEYGLNAFRLT*ESKPKQ Trigger: CTGCTTAGGCTTGCTCTCCAACGTTAACCGAAATGC...GTTTAACCCATACTCAAGTGTCTGCATAGGAGGTAAACAGGGTATACTTTGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| CDS-3UTR CAA 90 bp | GCTTGCCTAGACCAAGAAGCAGCACACACACCTCATTTATGCAAACTAAGAATGTATCTCTGGTTACAGTaGGGGCTCTGCACAAAGATT | + |
|
Preference number: 5 (lower is better) Translates to: ACLDQEAAHTPHLCKLRMYLWLQ*GLCTKI Trigger: AATCTTTGTGCAGAGCCCCAACTGTAACCAGAGATA...CATTCTTAGTTTGCATAAATGAGGTGTGTGTGCTGCTTCTTGGTCTAGGCAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR CAA 90 bp | TATACAAACAGCATAGTACTGCAATACTGGGTCTGGACACATTACCTGTACACATCCAGCAAGGAGTACTaGTTACTGTCTGCCTCCGAT | + |
|
Preference number: 5 (lower is better) Translates to: YTNSIVLQYWVWTHYLYTSSKEY*LLSASD Trigger: ATCGGAGGCAGACAGTAACAAGTACTCCTTGCTGGA...TGTGTACAGGTAATGTGTCCAGACCCAGTATTGCAGTACTATGCTGTTTGTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR CAA 90 bp | AACAGCATAGTACTGCAATACTGGGTCTGGACACATTACCTGTACACAACTACTACTGATCTACCGTATTaGCTGTACTCAGTCCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: NSIVLQYWVWTHYLYTTTTDLPY*LYSVPK Trigger: TTTGGGGACTGAGTACAGCAAATACGGTAGATCAGT...AGTAGTTGTGTACAGGTAATGTGTCCAGACCCAGTATTGCAGTACTATGCTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR CAA 90 bp | AGTCTGGTTATTAGACAAAAGGACTTACTGCCCACACAAACCTTTCCTGGACTCGTTCATAGTATGCGATaGAACACCAGAATGCAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: SLVIRQKDLLPTQTFPGLVHSMR*NTRMQV Trigger: AACCTGCATTCTGGTGTTCAATCGCATACTATGAAC...GAGTCCAGGAAAGGTTTGTGTGGGCAGTAAGTCCTTTTGTCTAATAACCAGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168423.9 |
||
| CDS-3UTR CAA 90 bp | TGGACACATTACCTGTACACAACTACTACTGTTATTAATAACCTTTGGGATACTAGCTGTAAAGGCCTGTaGTGTCCCACTGATCTACCG | + |
|
Preference number: 5 (lower is better) Translates to: WTHYLYTTTTVINNLWDTSCKGL*CPTDLP Trigger: CGGTAGATCAGTGGGACACAACAGGCCTTTACAGCT...AGTATCCCAAAGGTTATTAATAACAGTAGTAGTTGTGTACAGGTAATGTGTCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
||
| CDS-3UTR CAA 90 bp | TACTGGGTCTGGACACATTACCTGTACACAACTACTACTGTTATTAATAACCTTGCCTGTGTCCATACTTaGGTTCAACTGTTGGTCACT | + |
|
Preference number: 5 (lower is better) Translates to: YWVWTHYLYTTTTVINNLACVHT*VQLLVT Trigger: AGTGACCAACAGTTGAACCAAAGTATGGACACAGGC...AAGGTTATTAATAACAGTAGTAGTTGTGTACAGGTAATGTGTCCAGACCCAGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
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| CDS-3UTR CAA 90 bp | GAAGCAGCACACACACCTCATTTATGCAAACTAAGAATGTATACAAACAGCATAGGCTCTGCACAAAGATaGCACTATCACTTAGGCACT | + |
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Preference number: 5 (lower is better) Translates to: EAAHTPHLCKLRMYTNSIGSAQR*HYHLGT Trigger: AGTGCCTAAGTGATAGTGCAATCTTTGTGCAGAGCC...TATGCTGTTTGTATACATTCTTAGTTTGCATAAATGAGGTGTGTGTGCTGCTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
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| CDS-3UTR CAA 90 bp | ACTGGGTCTGGACACATTACCTGTACACAACTACTACTGTTATTAATAACCTTTATCAAGAGACCTGGTTaGTTCAGAGAAGCTGTAAAG | + |
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Preference number: 5 (lower is better) Translates to: TGSGHITCTQLLLLLITFIKRPG*FREAVK Trigger: CTTTACAGCTTCTCTGAACAAACCAGGTCTCTTGAT...AAAGGTTATTAATAACAGTAGTAGTTGTGTACAGGTAATGTGTCCAGACCCAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
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| CDS-3UTR CAA 90 bp | ACTGGGTCTGGACACATTACCTGTACACAACTACTACTGTTATTAATAACCTTTGTTCATAGTATGCGATaGAACACCAGAATGCAGGTT | + |
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Preference number: 5 (lower is better) Translates to: TGSGHITCTQLLLLLITFVHSMR*NTRMQV Trigger: AACCTGCATTCTGGTGTTCAATCGCATACTATGAAC...AAAGGTTATTAATAACAGTAGTAGTTGTGTACAGGTAATGTGTCCAGACCCAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
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| CDS-3UTR CAA 90 bp | TGGACACATTACCTGTACACAACTACTACTGTTATTAATAACCTTTGGGATACTTATCTCTGGTTACAGTaGGGGCTCTGCACAAAGATT | + |
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Preference number: 5 (lower is better) Translates to: WTHYLYTTTTVINNLWDTYLWLQ*GLCTKI Trigger: AATCTTTGTGCAGAGCCCCAACTGTAACCAGAGATA...AGTATCCCAAAGGTTATTAATAACAGTAGTAGTTGTGTACAGGTAATGTGTCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
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| CDS-3UTR CAA 90 bp | AAACTAAGAATGTATACAAACAGCATAGTACTGCAATACTGGGTCTGGACACATTTCCTATATGTCTTCTaGTCATTTCTACAGTGGCAT | + |
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Preference number: 5 (lower is better) Translates to: KLRMYTNSIVLQYWVWTHFLYVF*SFLQWH Trigger: ATGCCACTGTAGAAATGACAAGAAGACATATAGGAA...ATGTGTCCAGACCCAGTATTGCAGTACTATGCTGTTTGTATACATTCTTAGTTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
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| CDS-3UTR CAA 90 bp | TGGACACATTACCTGTACACAACTACTACTGTTATTAATAACCTTTGGGATACTTTCCTATATGTCTTCTaGTCATTTCTACAGTGGCAT | + |
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Preference number: 5 (lower is better) Translates to: WTHYLYTTTTVINNLWDTFLYVF*SFLQWH Trigger: ATGCCACTGTAGAAATGACAAGAAGACATATAGGAA...AGTATCCCAAAGGTTATTAATAACAGTAGTAGTTGTGTACAGGTAATGTGTCCA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 |
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| CDS CAA 90 bp | GGCCATCAAGAGACCTGGTTTGTTCAGAGAAGCTGTAAAGGCCTGTaGTGTCCCACTGATCTACCGTATTTGCTGTACTCAGTCCCCAAA | + |
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Preference number: 6 (lower is better) Translates to: GHQETWFVQRSCKGL*CPTDLPYLLYSVPK Trigger: TTTGGGGACTGAGTACAGCAAATACGGTAGATCAGTGGGACACAACAGGCCTTTACAGCTTCTCTGAACAAACCAGGTCTCTTGATGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 ENSMUST00000171256.8 |
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| CDS CAA 90 bp | CAGAGAAGCTGTAAAGGCCTGTTGTGTCCCACTGATCTACCGTATTaGCTGTACTCAGTCCCCAAATTTCAGAGCAAGTGCTTGGTATGG | + |
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Preference number: 6 (lower is better) Translates to: QRSCKGLLCPTDLPY*LYSVPKFQSKCLVW Trigger: CCATACCAAGCACTTGCTCTGAAATTTGGGGACTGAGTACAGCAAATACGGTAGATCAGTGGGACACAACAGGCCTTTACAGCTTCTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 ENSMUST00000171256.8 |
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| CDS CAA 72 bp | TGTAAAGGCCTGTTGTGTCCCACTGATCTACCGTATTaGCTGTACTCAGTCCCCAAATTTCAGAGCAAGTGC | + |
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Preference number: 6 (lower is better) Translates to: CKGLLCPTDLPY*LYSVPKFQSKC Trigger: GCACTTGCTCTGAAATTTGGGGACTGAGTACAGCAAATACGGTAGATCAGTGGGACACAACAGGCCTTTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025453.15 ENSMUST00000168423.9 ENSMUST00000171256.8 |
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| CDS CAA 90 bp | CCTATATGTCTTCTTGTCATTTCTACAGTGGCATTTCGGTTAACGTaGGAGAGCAAGCCTAAGCAGAACCTCTCCGAGTTTGATGGGTCT | + |
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Preference number: 6 (lower is better) Translates to: PICLLVISTVAFRLT*ESKPKQNLSEFDGS Trigger: AGACCCATCAAACTCGGAGAGGTTCTGCTTAGGCTTGCTCTCCAACGTTAACCGAAATGCCACTGTAGAAATGACAAGAAGACATATAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025453.15 ENSMUST00000091831.13 ENSMUST00000113930.3 ENSMUST00000168423.9 |
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| CDS CCA 72 bp | TCCAGGTGGTGGTGTTTCTGGGATGTAATTACTCTGTaGCTCAATTCCTGCTGGGAAATTTGTGTTTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: SRWWCFWDVITL*LNSCWEICVFW Trigger: CCAGAAAACACAAATTTCCCAGCAGGAATTGAGCCACAGAGTAATTACATCCCAGAAACACCACCACCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025453.15 ENSMUST00000091831.13 ENSMUST00000113930.3 ENSMUST00000168423.9 ENSMUST00000171256.8 |
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| CDS CAA 72 bp | CTTCTTGTCATTTCTACAGTGGCATTTCGGTTAACGTaGGAGAGCAAGCCTAAGCAGAACCTCTCCGAGTTT | + |
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Preference number: 6 (lower is better) Translates to: LLVISTVAFRLT*ESKPKQNLSEF Trigger: AAACTCGGAGAGGTTCTGCTTAGGCTTGCTCTCCAACGTTAACCGAAATGCCACTGTAGAAATGACAAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025453.15 ENSMUST00000091831.13 ENSMUST00000113930.3 ENSMUST00000168423.9 |
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| CDS GCA 72 bp | TGTTTCTGGGATGTAATTACTCTGTGGCTCAATTCCTaGTGGGAAATTTGTGTTTTCTGGAATGGAGTGGGT | + |
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Preference number: 6 (lower is better) Translates to: CFWDVITLWLNS*WEICVFWNGVG Trigger: ACCCACTCCATTCCAGAAAACACAAATTTCCCAGCAGGAATTGAGCCACAGAGTAATTACATCCCAGAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025453.15 ENSMUST00000091831.13 ENSMUST00000113930.3 ENSMUST00000168423.9 ENSMUST00000171256.8 |
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