Pregenerated sensors for SMAD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031681Ensembl transcript IDs: ENSMUST00000066091.14, ENSMUST00000109885.8
Found 154 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TATAGCAGCTATGGGGCTGGGGACACAGCACAGTGGGTGGAGCGCTaGCCTCGTAGAGCACAGACCTTACGGCAGGGCAATGGTAGCACA | + |
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Preference number: 1 (lower is better) Translates to: YSSYGAGDTAQWVER*PRRAQTLRQGNGST Trigger: TGTGCTACCATTGCCCTGCCGTAAGGTCTGTGCTCTACGAGGCCAGCGCTCCACCCACTGTGCTGTGTCCCCAGCCCCATAGCTGCTATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
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| 3UTR CCA 90 bp | ACATGGGGAGGACAGAGAACAGCTGAGGGAGCTGTTTCTACCACGTaGGTCCCAGGAATCAAACTGCCTGCCAGAAGGCACCTAAAAGAG | + |
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Preference number: 1 (lower is better) Translates to: TWGGQRTAEGAVSTT*VPGIKLPARRHLKE Trigger: CTCTTTTAGGTGCCTTCTGGCAGGCAGTTTGATTCCTGGGACCCACGTGGTAGAAACAGCTCCCTCAGCTGTTCTCTGTCCTCCCCATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
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| 3UTR TCA 90 bp | AGCTACCTGGGCTACGTTAGACCCTCTCTCAAAAGTACAGAAGATTaGCCAGGGCCCGCAAGATGGCTCAGGTGGGTAAAGGTACCTACC | + |
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Preference number: 1 (lower is better) Translates to: SYLGYVRPSLKSTED*PGPARWLRWVKVPT Trigger: GGTAGGTACCTTTACCCACCTGAGCCATCTTGCGGGCCCTGGTCAATCTTCTGTACTTTTGAGAGAGGGTCTAACGTAGCCCAGGTAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
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| 3UTR TCA 90 bp | CGACTGCTCACAACAATCTACATCTCACTTCTGCTCCAAGAGATCTaGCCCCCTCCTCTGACCTCCAGCAGCACACACACATTGCGCTCA | + |
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Preference number: 1 (lower is better) Translates to: RLLTTIYISLLLQEI*PPPLTSSSTHTLRS Trigger: TGAGCGCAATGTGTGTGTGCTGCTGGAGGTCAGAGGAGGGGGTCAGATCTCTTGGAGCAGAAGTGAGATGTAGATTGTTGTGAGCAGTCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
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| 3UTR CCA 90 bp | GTACCTACCACCAAGCCTCAGCATTACCAAGCCTCAGTCTATCCTTaGGATCCACACGGTGGGAGGGAAAGATTACATTGCTATGTTCCA | + |
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Preference number: 1 (lower is better) Translates to: VPTTKPQHYQASVYP*DPHGGRERLHCYVP Trigger: TGGAACATAGCAATGTAATCTTTCCCTCCCACCGTGTGGATCCCAAGGATAGACTGAGGCTTGGTAATGCTGAGGCTTGGTGGTAGGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
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| 3UTR CCA 90 bp | ACAGATCAGGACTTTAAACTCCTCCTCAGCATCAGCCCAGCTACCTaGGCTACGTTAGACCCTCTCTCAAAAGTACAGAAGATTGACCAG | + |
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Preference number: 1 (lower is better) Translates to: TDQDFKLLLSISPAT*ATLDPLSKVQKIDQ Trigger: CTGGTCAATCTTCTGTACTTTTGAGAGAGGGTCTAACGTAGCCCAGGTAGCTGGGCTGATGCTGAGGAGGAGTTTAAAGTCCTGATCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
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| 3UTR CCA 90 bp | CAGTTTCTCAATCCAATAGTTGGTCACAGAGGTCAAGTATTATCGTaGCTCCTTCGTCAGGTCTCCATCCTGTCTGACTTGTCCATCCTT | + |
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Preference number: 1 (lower is better) Translates to: QFLNPIVGHRGQVLS*LLRQVSILSDLSIL Trigger: AAGGATGGACAAGTCAGACAGGATGGAGACCTGACGAAGGAGCCACGATAATACTTGACCTCTGTGACCAACTATTGGATTGAGAAACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
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| 3UTR TCA 90 bp | ACACAGCAAATTCAGACACCAGCTTGTCTGTTTAAGGCAGCAAGCTaGGCTTTACGGTATAGTCTACATTTGCAGCCGTCGTTTTCTTCC | + |
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Preference number: 1 (lower is better) Translates to: TQQIQTPACLFKAAS*ALRYSLHLQPSFSS Trigger: GGAAGAAAACGACGGCTGCAAATGTAGACTATACCGTAAAGCTCAGCTTGCTGCCTTAAACAGACAAGCTGGTGTCTGAATTTGCTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
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| 3UTR CCA 90 bp | GTTCTTGCTATCAACCAAGGCTTGTCAGTTTCTCAATCCAATAGTTaGTCACAGAGGTCAAGTATTATCGTGGCTCCTTCGTCAGGTCTC | + |
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Preference number: 1 (lower is better) Translates to: VLAINQGLSVSQSNS*SQRSSIIVAPSSGL Trigger: GAGACCTGACGAAGGAGCCACGATAATACTTGACCTCTGTGACCAACTATTGGATTGAGAAACTGACAAGCCTTGGTTGATAGCAAGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
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| 3UTR TCA 90 bp | GCTGATAGGTATATATACACCAAGAAGGCACAGATTTACATGTTGTaGGAAGGCATGTGTGTGTTGTGTGAGCATATGTGTATGGGGGAA | + |
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Preference number: 1 (lower is better) Translates to: ADRYIYTKKAQIYML*EGMCVLCEHMCMGE Trigger: TTCCCCCATACACATATGCTCACACAACACACACATGCCTTCTCACAACATGTAAATCTGTGCCTTCTTGGTGTATATATACCTATCAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
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| 3UTR-3UTR CCA 90 bp | GCTGTTTCTACCACGTGGGTCCCAGGAATCAAACTGCCTGCCAGAAGGCACCTAGGGGACACAGCACAGTaGGTGGAGCGCTGGCCTCGT | + |
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Preference number: 2 (lower is better) Translates to: AVSTTWVPGIKLPARRHLGDTAQ*VERWPR Trigger: ACGAGGCCAGCGCTCCACCCACTGTGCTGTGTCCCC...TAGGTGCCTTCTGGCAGGCAGTTTGATTCCTGGGACCCACGTGGTAGAAACAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
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| 3UTR-3UTR TCA 90 bp | GGCCCTGCAACAAGCCACGGAGCTTCTGAAGACGGCACAGGAAAGACGACTGCCAGGACAGAGAACAGCTaGGGGAGCTGTTTCTACCAC | + |
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Preference number: 2 (lower is better) Translates to: GPATSHGASEDGTGKTTARTENS*GSCFYH Trigger: GTGGTAGAAACAGCTCCCTCAGCTGTTCTCTGTCCT...GGCAGTCGTCTTTCCTGTGCCGTCTTCAGAAGCTCCGTGGCTTGTTGCAGGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
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| 3UTR-3UTR TCA 90 bp | TATGGGGCTGGGGACACAGCACAGTGGGTGGAGCGCTGGCCTCGTAGAGCACAGCAGATTTACATGTTGTaGGAAGGCATGTGTGTGTTG | + |
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Preference number: 2 (lower is better) Translates to: YGAGDTAQWVERWPRRAQQIYML*EGMCVL Trigger: CAACACACACATGCCTTCTCACAACATGTAAATCTG...CTGTGCTCTACGAGGCCAGCGCTCCACCCACTGTGCTGTGTCCCCAGCCCCATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
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| 3UTR-3UTR CCA 90 bp | CCTCAGCATCAGCCCAGCTACCTGGGCTACGTTAGACCCTCTCTCAAAAGTACAGCAAGATGGCTCAGGTaGGTAAAGGTACCTACCACC | + |
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Preference number: 2 (lower is better) Translates to: PQHQPSYLGYVRPSLKSTARWLR*VKVPTT Trigger: GGTGGTAGGTACCTTTACCCACCTGAGCCATCTTGC...TGTACTTTTGAGAGAGGGTCTAACGTAGCCCAGGTAGCTGGGCTGATGCTGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
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| 3UTR-3UTR GCA 90 bp | ATATTAAGGAGGTGCCACATTCAGCTAAGGAGGGGGCAGGATGCCTTTGATCTGGTTGCTAGAGTGTGCTaGCATCAGATGCACATTGGT | + |
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Preference number: 2 (lower is better) Translates to: ILRRCHIQLRRGQDAFDLVARVC*HQMHIG Trigger: ACCAATGTGCATCTGATGGCAGCACACTCTAGCAAC...CAGATCAAAGGCATCCTGCCCCCTCCTTAGCTGAATGTGGCACCTCCTTAATAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
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| 3UTR-3UTR CCA 90 bp | TTGGAGCTGAGGGCCAGGGCCTTGCTAACTTTTCAATTACACATAAAATGCATGCCCTGTGTGTGCACATaGGGAGGACAGAGAACAGCT | + |
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Preference number: 2 (lower is better) Translates to: LELRARALLTFQLHIKCMPCVCT*GGQRTA Trigger: AGCTGTTCTCTGTCCTCCCCATGTGCACACACAGGG...CATGCATTTTATGTGTAATTGAAAAGTTAGCAAGGCCCTGGCCCTCAGCTCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
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| 3UTR-3UTR CCA 90 bp | ATATTAAGGAGGTGCCACATTCAGCTAAGGAGGGGGCAGGATGCCTTTGATCTGGGAAAGACGACTGCCTaGTCCAAGTCTGTAATTAGC | + |
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Preference number: 2 (lower is better) Translates to: ILRRCHIQLRRGQDAFDLGKTTA*SKSVIS Trigger: GCTAATTACAGACTTGGACCAGGCAGTCGTCTTTCC...CAGATCAAAGGCATCCTGCCCCCTCCTTAGCTGAATGTGGCACCTCCTTAATAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
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| 3UTR-3UTR CCA 90 bp | ACAAGGACTGGCTCCTTGGTCACATTTGCACATAGTATACAGGCCAGTTTCTTTAGGATGCCTTTGATCTaGGGGAGGCCGAGCAAAGCA | + |
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Preference number: 2 (lower is better) Translates to: TRTGSLVTFAHSIQASFFRMPLI*GRPSKA Trigger: TGCTTTGCTCGGCCTCCCCCAGATCAAAGGCATCCT...AAAGAAACTGGCCTGTATACTATGTGCAAATGTGACCAAGGAGCCAGTCCTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
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| 3UTR CAA 90 bp | CAAGTATTATCGTGGCTCCTTCGTCAGGTCTCCATCCTGTCTGACTaGTCCATCCTTCAAGTACATGCAAGGCTCGATAGTTTGCAAGAG | + |
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Preference number: 2 (lower is better) Translates to: QVLSWLLRQVSILSD*SILQVHARLDSLQE Trigger: CTCTTGCAAACTATCGAGCCTTGCATGTACTTGAAGGATGGACAAGTCAGACAGGATGGAGACCTGACGAAGGAGCCACGATAATACTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
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| 3UTR-3UTR GCA 90 bp | CTGCTTAACTGTGCCGTGGAGCGGATAAGACAGAAGAAAAGAAGTCAGATAAAATCAGCGCCAACCTTCTaGCAACACCCCACACAAAAG | + |
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Preference number: 2 (lower is better) Translates to: LLNCAVERIRQKKRSQIKSAPTF*QHPTQK Trigger: CTTTTGTGTGGGGTGTTGGCAGAAGGTTGGCGCTGA...TTTTATCTGACTTCTTTTCTTCTGTCTTATCCGCTCCACGGCACAGTTAAGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
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| 3UTR-3UTR CCA 90 bp | ACAAGGACTGGCTCCTTGGTCACATTTGCACATAGTATACAGGCCAGTTTCTTTGCTGTTTCTACCACGTaGGTCCCAGGAATCAAACTG | + |
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Preference number: 2 (lower is better) Translates to: TRTGSLVTFAHSIQASFFAVSTT*VPGIKL Trigger: CAGTTTGATTCCTGGGACCCACGTGGTAGAAACAGC...AAAGAAACTGGCCTGTATACTATGTGCAAATGTGACCAAGGAGCCAGTCCTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
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| 3UTR CAA 90 bp | GTGGCACTTGTGAACAGTGAACAAGGACTGGCTCCTTGGTCACATTaGCACATAGTATACAGGCCAGTTTCTTTAAGGGGCACTAGTTTT | + |
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Preference number: 2 (lower is better) Translates to: VALVNSEQGLAPWSH*HIVYRPVSLRGTSF Trigger: AAAACTAGTGCCCCTTAAAGAAACTGGCCTGTATACTATGTGCAAATGTGACCAAGGAGCCAGTCCTTGTTCACTGTTCACAAGTGCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
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| 3UTR-3UTR TCA 90 bp | TTACTGGAGCCAAAACTTCTTCAAGAATTCAATAATCACAGTCCATCAGGGACTGGCACTTGTGAACAGTaGACAAGGACTGGCTCCTTG | + |
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Preference number: 2 (lower is better) Translates to: LLEPKLLQEFNNHSPSGTGTCEQ*TRTGSL Trigger: CAAGGAGCCAGTCCTTGTTCACTGTTCACAAGTGCC...AGTCCCTGATGGACTGTGATTATTGAATTCTTGAAGAAGTTTTGGCTCCAGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
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| 3UTR CAA 90 bp | AGCAATGACGCCGATCTTCTCCTTTCTTTGATATTACAGATACTTTaGGAGCTGAGGGCCAGGGCCTTGCTAACTTTTCAATTACACATA | + |
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Preference number: 2 (lower is better) Translates to: SNDADLLLSLILQIL*ELRARALLTFQLHI Trigger: TATGTGTAATTGAAAAGTTAGCAAGGCCCTGGCCCTCAGCTCCAAAAGTATCTGTAATATCAAAGAAAGGAGAAGATCGGCGTCATTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
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| 3UTR CAA 90 bp | GTTGATTTTTACAACAGAATGTCACAATGTAAACTGAAAGGGTTCTaGCTATCAACCAAGGCTTGTCAGTTTCTCAATCCAATAGTTGGT | + |
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Preference number: 2 (lower is better) Translates to: VDFYNRMSQCKLKGF*LSTKACQFLNPIVG Trigger: ACCAACTATTGGATTGAGAAACTGACAAGCCTTGGTTGATAGCAAGAACCCTTTCAGTTTACATTGTGACATTCTGTTGTAAAAATCAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
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| 3UTR-3UTR CCA 90 bp | TTAACTGTTAGTTGTGTAATCAGTAGGAAACAAATGCCAAGGAGACAGCTTACTCCATCAGATGCACATTaGTTTTTAACATTTCATCGG | + |
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Preference number: 2 (lower is better) Translates to: LTVSCVISRKQMPRRQLTPSDAH*FLTFHR Trigger: CCGATGAAATGTTAAAAACCAATGTGCATCTGATGG...AGTAAGCTGTCTCCTTGGCATTTGTTTCCTACTGATTACACAACTAACAGTTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
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| 3UTR CAA 90 bp | ATGTTCCAGAATAACTTTTTGGACAGTGATACTCTTGTTAGAAATTaGGAAAACAACAACAACAACAACAACAACAACAGTAGCCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: MFQNNFLDSDTLVRN*ENNNNNNNNNSSLL Trigger: CAGCAGGCTACTGTTGTTGTTGTTGTTGTTGTTGTTGTTTTCCAAATTTCTAACAAGAGTATCACTGTCCAAAAAGTTATTCTGGAACAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
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| 3UTR CCA 72 bp | TATGGGGCTGGGGACACAGCACAGTGGGTGGAGCGCTaGCCTCGTAGAGCACAGACCTTACGGCAGGGCAAT | + |
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Preference number: 3 (lower is better) Translates to: YGAGDTAQWVER*PRRAQTLRQGN Trigger: ATTGCCCTGCCGTAAGGTCTGTGCTCTACGAGGCCAGCGCTCCACCCACTGTGCTGTGTCCCCAGCCCCATA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
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| 3UTR CCA 72 bp | ATAGCAGCTATGGGGCTGGGGACACAGCACAGTGGGTaGAGCGCTGGCCTCGTAGAGCACAGACCTTACGGC | + |
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Preference number: 3 (lower is better) Translates to: IAAMGLGTQHSG*SAGLVEHRPYG Trigger: GCCGTAAGGTCTGTGCTCTACGAGGCCAGCGCTCCACCCACTGTGCTGTGTCCCCAGCCCCATAGCTGCTAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
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| 3UTR TCA 72 bp | GTGCCACATTCAGCTAAGGAGGGGGCAGGATGCCTTTaGTCTGGGGGAGGCCGAGCAAAGCAAGGCTCTGGA | + |
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Preference number: 3 (lower is better) Translates to: VPHSAKEGAGCL*SGGGRAKQGSG Trigger: TCCAGAGCCTTGCTTTGCTCGGCCTCCCCCAGATCAAAGGCATCCTGCCCCCTCCTTAGCTGAATGTGGCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
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| 3UTR CCA 72 bp | CACTATAGCAGCTATGGGGCTGGGGACACAGCACAGTaGGTGGAGCGCTGGCCTCGTAGAGCACAGACCTTA | + |
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Preference number: 3 (lower is better) Translates to: HYSSYGAGDTAQ*VERWPRRAQTL Trigger: TAAGGTCTGTGCTCTACGAGGCCAGCGCTCCACCCACTGTGCTGTGTCCCCAGCCCCATAGCTGCTATAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
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| 3UTR TCA 72 bp | GCCCTGTGTGTGCACATGGGGAGGACAGAGAACAGCTaGGGGAGCTGTTTCTACCACGTGGGTCCCAGGAAT | + |
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Preference number: 3 (lower is better) Translates to: ALCVHMGRTENS*GSCFYHVGPRN Trigger: ATTCCTGGGACCCACGTGGTAGAAACAGCTCCCTCAGCTGTTCTCTGTCCTCCCCATGTGCACACACAGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
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| 3UTR CCA 72 bp | GGACAGAGAACAGCTGAGGGAGCTGTTTCTACCACGTaGGTCCCAGGAATCAAACTGCCTGCCAGAAGGCAC | + |
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Preference number: 3 (lower is better) Translates to: GQRTAEGAVSTT*VPGIKLPARRH Trigger: GTGCCTTCTGGCAGGCAGTTTGATTCCTGGGACCCACGTGGTAGAAACAGCTCCCTCAGCTGTTCTCTGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
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| 3UTR TCA 72 bp | GGCTACGTTAGACCCTCTCTCAAAAGTACAGAAGATTaGCCAGGGCCCGCAAGATGGCTCAGGTGGGTAAAG | + |
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Preference number: 3 (lower is better) Translates to: GYVRPSLKSTED*PGPARWLRWVK Trigger: CTTTACCCACCTGAGCCATCTTGCGGGCCCTGGTCAATCTTCTGTACTTTTGAGAGAGGGTCTAACGTAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
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| 3UTR CCA 72 bp | GGAGCTTCTGAAGACGGCACAGGAAAGACGACTGCCTaGTCCAAGTCTGTAATTAGCACTCTTCCTCACGGT | + |
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Preference number: 3 (lower is better) Translates to: GASEDGTGKTTA*SKSVISTLPHG Trigger: ACCGTGAGGAAGAGTGCTAATTACAGACTTGGACCAGGCAGTCGTCTTTCCTGTGCCGTCTTCAGAAGCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
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| 3UTR TCA 72 bp | ACAACAATCTACATCTCACTTCTGCTCCAAGAGATCTaGCCCCCTCCTCTGACCTCCAGCAGCACACACACA | + |
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Preference number: 3 (lower is better) Translates to: TTIYISLLLQEI*PPPLTSSSTHT Trigger: TGTGTGTGTGCTGCTGGAGGTCAGAGGAGGGGGTCAGATCTCTTGGAGCAGAAGTGAGATGTAGATTGTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
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| 3UTR CCA 72 bp | ACCAAGCCTCAGCATTACCAAGCCTCAGTCTATCCTTaGGATCCACACGGTGGGAGGGAAAGATTACATTGC | + |
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Preference number: 3 (lower is better) Translates to: TKPQHYQASVYP*DPHGGRERLHC Trigger: GCAATGTAATCTTTCCCTCCCACCGTGTGGATCCCAAGGATAGACTGAGGCTTGGTAATGCTGAGGCTTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
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| 3UTR-3UTR CAA 90 bp | ATATTAAGGAGGTGCCACATTCAGCTAAGGAGGGGGCAGGATGCCTTTGATCTGATATTACAGATACTTTaGGAGCTGAGGGCCAGGGCC | + |
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Preference number: 3 (lower is better) Translates to: ILRRCHIQLRRGQDAFDLILQIL*ELRARA Trigger: GGCCCTGGCCCTCAGCTCCAAAAGTATCTGTAATAT...CAGATCAAAGGCATCCTGCCCCCTCCTTAGCTGAATGTGGCACCTCCTTAATAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
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| 3UTR TCA 72 bp | ATTATCGTGGCTCCTTCGTCAGGTCTCCATCCTGTCTaGCTTGTCCATCCTTCAAGTACATGCAAGGCTCGA | + |
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Preference number: 3 (lower is better) Translates to: IIVAPSSGLHPV*LVHPSSTCKAR Trigger: TCGAGCCTTGCATGTACTTGAAGGATGGACAAGTCAGACAGGATGGAGACCTGACGAAGGAGCCACGATAAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
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| 3UTR GCA 72 bp | AGAGAGGACCTGAGTTTGGTTCCAGGCATCCACGACTaGTCACAACAATCTACATCTCACTTCTGCTCCAAG | + |
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Preference number: 3 (lower is better) Translates to: REDLSLVPGIHD*SQQSTSHFCSK Trigger: CTTGGAGCAGAAGTGAGATGTAGATTGTTGTGAGCAGTCGTGGATGCCTGGAACCAAACTCAGGTCCTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
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| 3UTR CCA 72 bp | GACTTTAAACTCCTCCTCAGCATCAGCCCAGCTACCTaGGCTACGTTAGACCCTCTCTCAAAAGTACAGAAG | + |
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Preference number: 3 (lower is better) Translates to: DFKLLLSISPAT*ATLDPLSKVQK Trigger: CTTCTGTACTTTTGAGAGAGGGTCTAACGTAGCCCAGGTAGCTGGGCTGATGCTGAGGAGGAGTTTAAAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
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| 3UTR-3UTR CAA 90 bp | GAGCTTTACGGTATAGTCTACATTTGCAGCCGTCGTTTTCTTCCCGACCCCGCCGCTATCAACCAAGGCTaGTCAGTTTCTCAATCCAAT | + |
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Preference number: 3 (lower is better) Translates to: ELYGIVYICSRRFLPDPAAINQG*SVSQSN Trigger: ATTGGATTGAGAAACTGACAAGCCTTGGTTGATAGC...GGCGGGGTCGGGAAGAAAACGACGGCTGCAAATGTAGACTATACCGTAAAGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
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| 3UTR TCA 72 bp | ATTCAGACACCAGCTTGTCTGTTTAAGGCAGCAAGCTaGGCTTTACGGTATAGTCTACATTTGCAGCCGTCG | + |
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Preference number: 3 (lower is better) Translates to: IQTPACLFKAAS*ALRYSLHLQPS Trigger: CGACGGCTGCAAATGTAGACTATACCGTAAAGCTCAGCTTGCTGCCTTAAACAGACAAGCTGGTGTCTGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
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| 3UTR CCA 72 bp | AATCCAATAGTTGGTCACAGAGGTCAAGTATTATCGTaGCTCCTTCGTCAGGTCTCCATCCTGTCTGACTTG | + |
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Preference number: 3 (lower is better) Translates to: NPIVGHRGQVLS*LLRQVSILSDL Trigger: CAAGTCAGACAGGATGGAGACCTGACGAAGGAGCCACGATAATACTTGACCTCTGTGACCAACTATTGGATT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
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| 3UTR CCA 72 bp | GTGGCACTTGTGAACAGTGAACAAGGACTGGCTCCTTaGTCACATTTGCACATAGTATACAGGCCAGTTTCT | + |
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Preference number: 3 (lower is better) Translates to: VALVNSEQGLAP*SHLHIVYRPVS Trigger: AGAAACTGGCCTGTATACTATGTGCAAATGTGACCAAGGAGCCAGTCCTTGTTCACTGTTCACAAGTGCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
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| 3UTR CCA 72 bp | ATCAACCAAGGCTTGTCAGTTTCTCAATCCAATAGTTaGTCACAGAGGTCAAGTATTATCGTGGCTCCTTCG | + |
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Preference number: 3 (lower is better) Translates to: INQGLSVSQSNS*SQRSSIIVAPS Trigger: CGAAGGAGCCACGATAATACTTGACCTCTGTGACCAACTATTGGATTGAGAAACTGACAAGCCTTGGTTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
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| 3UTR GCA 72 bp | CATATACTGGGTACTGAAACACGAAGCCAGTTGATTTaGGAACAGAAGGAATTACTCATCTGCTCTCACAGT | + |
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Preference number: 3 (lower is better) Translates to: HILGTETRSQLI*EQKELLICSHS Trigger: ACTGTGAGAGCAGATGAGTAATTCCTTCTGTTCGCAAATCAACTGGCTTCGTGTTTCAGTACCCAGTATATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
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| 3UTR-3UTR CAA 90 bp | ACAAGGACTGGCTCCTTGGTCACATTTGCACATAGTATACAGGCCAGTTTCTTTGCCATCAGATGCACATaGGTTTTTAACATTTCATCG | + |
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Preference number: 3 (lower is better) Translates to: TRTGSLVTFAHSIQASFFAIRCT*VFNISS Trigger: CGATGAAATGTTAAAAACCAATGTGCATCTGATGGC...AAAGAAACTGGCCTGTATACTATGTGCAAATGTGACCAAGGAGCCAGTCCTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
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| 3UTR TCA 72 bp | AAAAAGTCAATAAATTTTGAATCTGCAGCTTTGGGCTaGAGAGAGGTCTTAACCGTTAAGAGAGGACCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: KKSINFESAALG*REVLTVKRGPE Trigger: CTCAGGTCCTCTCTTAACGGTTAAGACCTCTCTTCAGCCCAAAGCTGCAGATTCAAAATTTATTGACTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
||
| 3UTR TCA 72 bp | TATATATACACCAAGAAGGCACAGATTTACATGTTGTaGGAAGGCATGTGTGTGTTGTGTGAGCATATGTGT | + |
|
Preference number: 3 (lower is better) Translates to: YIYTKKAQIYML*EGMCVLCEHMC Trigger: ACACATATGCTCACACAACACACACATGCCTTCTCACAACATGTAAATCTGTGCCTTCTTGGTGTATATATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
||
| CDS-3UTR CCA 90 bp | TATGGGGCTGGGGACACAGCACAGTGGGTGGAGCGCTGGCCTCGTAGAGCACAGAGTTCATGGTGGCTCTaGAGGTCGGGCCAGCGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: YGAGDTAQWVERWPRRAQSSWWL*RSGQRH Trigger: GTGGCGCTGGCCCGACCTCCAGAGCCACCATGAACT...CTGTGCTCTACGAGGCCAGCGCTCCACCCACTGTGCTGTGTCCCCAGCCCCATA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
||
| CDS-3UTR CCA 90 bp | TATGGGGCTGGGGACACAGCACAGTGGGTGGAGCGCTGGCCTCGTAGAGCACAGCTGCTGTTGGGGGAGTaGGGGAACGGGTGGCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: YGAGDTAQWVERWPRRAQLLLGE*GNGWLL Trigger: CAACAGCCACCCGTTCCCCCACTCCCCCAACAGCAG...CTGTGCTCTACGAGGCCAGCGCTCCACCCACTGTGCTGTGTCCCCAGCCCCATA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
||
| CDS-3UTR GCA 90 bp | AGGGGGCAGGATGCCTTTGATCTGGGGGAGGCCGAGCAAAGCAAGGCTCTGGAAGGATTGTACTCGCTGTaGCTCGGAACCAGCACCGGC | + |
|
Preference number: 4 (lower is better) Translates to: RGQDAFDLGEAEQSKALEGLYSL*LGTSTG Trigger: GCCGGTGCTGGTTCCGAGGCACAGCGAGTACAATCC...TTCCAGAGCCTTGCTTTGCTCGGCCTCCCCCAGATCAAAGGCATCCTGCCCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
||
| CDS-3UTR CCA 90 bp | GGCCCTGCAACAAGCCACGGAGCTTCTGAAGACGGCACAGGAAAGACGACTGCCTGGCTGTTGGGCTGCTaGAAAGAGTCTGGGAACGTG | + |
|
Preference number: 4 (lower is better) Translates to: GPATSHGASEDGTGKTTAWLLGC*KESGNV Trigger: CACGTTCCCAGACTCTTTCCAGCAGCCCAACAGCCA...GGCAGTCGTCTTTCCTGTGCCGTCTTCAGAAGCTCCGTGGCTTGTTGCAGGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
||
| CDS-3UTR TCA 90 bp | GCTGTTTCTACCACGTGGGTCCCAGGAATCAAACTGCCTGCCAGAAGGCACCTATTCGTGTCCATGGGCTaGGAGCCATCCTGGGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: AVSTTWVPGIKLPARRHLFVSMG*EPSWAM Trigger: CATGGCCCAGGATGGCTCTCAGCCCATGGACACGAA...TAGGTGCCTTCTGGCAGGCAGTTTGATTCCTGGGACCCACGTGGTAGAAACAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
||
| CDS-3UTR CCA 90 bp | CCTGATGAAAGCCCACTTCAGAAAGACTATCAGCGCCAACCTTCTGCCAACACCTGCCGCCAGGAGAGTTaGGGTAGCTGCTGTTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PDESPLQKDYQRQPSANTCRQES*GSCCWG Trigger: CCCCCAACAGCAGCTACCCCAACTCTCCTGGCGGCA...GGTGTTGGCAGAAGGTTGGCGCTGATAGTCTTTCTGAAGTGGGCTTTCATCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
||
| CDS-3UTR CCA 90 bp | CCTGATGAAAGCCCACTTCAGAAAGACTATCAGCGCCAACCTTCTGCCAACACCTGCCCGGGTCTGAGCTaGTTGGGGAGTGAGGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: PDESPLQKDYQRQPSANTCPGLS*LGSEGR Trigger: CCTACCCTCACTCCCCAACCAGCTCAGACCCGGGCA...GGTGTTGGCAGAAGGTTGGCGCTGATAGTCTTTCTGAAGTGGGCTTTCATCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
||
| CDS-3UTR CCA 90 bp | TTAAGGAGGTGCCACATTCAGCTAAGGAGGGGGCAGGATGCCTTTGATCTGGGGTCTTGCAGACGGTGGTaGGGTGAAAGCCGTGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LRRCHIQLRRGQDAFDLGSCRRW*GESRGG Trigger: ACCACCACGGCTTTCACCCCACCACCGTCTGCAAGA...CCCCAGATCAAAGGCATCCTGCCCCCTCCTTAGCTGAATGTGGCACCTCCTTAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
||
| CDS-3UTR CCA 90 bp | TTAAGGAGGTGCCACATTCAGCTAAGGAGGGGGCAGGATGCCTTTGATCTGGGGGGATCTTGCAGACGGTaGTGGGGTGAAAGCCGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LRRCHIQLRRGQDAFDLGGSCRR*WGESRG Trigger: ACCACGGCTTTCACCCCACCACCGTCTGCAAGATCC...CCCCAGATCAAAGGCATCCTGCCCCCTCCTTAGCTGAATGTGGCACCTCCTTAA 57% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
||
| CDS-3UTR TCA 90 bp | GTTTCTACCACGTGGGTCCCAGGAATCAAACTGCCTGCCAGAAGGCACCTAAAAGTGTCAGCTGGCATCTaGAAAGGGCTGCCCGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VSTTWVPGIKLPARRHLKVSAGI*KGLPGS Trigger: AGACCCGGGCAGCCCTTTTCAGATGCCAGCTGACAC...TTTTAGGTGCCTTCTGGCAGGCAGTTTGATTCCTGGGACCCACGTGGTAGAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
||
| CDS-3UTR GCA 90 bp | GAGCTTTACGGTATAGTCTACATTTGCAGCCGTCGTTTTCTTCCCGACCCCGCCGGGTGGCTGTTGGGCTaGTGGAAAGAGTCTGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ELYGIVYICSRRFLPDPAGWLLG*WKESGN Trigger: GTTCCCAGACTCTTTCCAGCAGCCCAACAGCCACCC...GGCGGGGTCGGGAAGAAAACGACGGCTGCAAATGTAGACTATACCGTAAAGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
||
| CDS-3UTR GCA 90 bp | GAGCTTTACGGTATAGTCTACATTTGCAGCCGTCGTTTTCTTCCCGACCCCGCCGCATCTGAAAAGGGCTaGCCGGGTCTGAGCTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ELYGIVYICSRRFLPDPAASEKG*PGLSWL Trigger: CAACCAGCTCAGACCCGGGCAGCCCTTTTCAGATGC...GGCGGGGTCGGGAAGAAAACGACGGCTGCAAATGTAGACTATACCGTAAAGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
||
| CDS-3UTR CCA 90 bp | GGTAAAGGTACCTACCACCAAGCCTCAGCATTACCAAGCCTCAGTCTATCCTTGTGCCCGGGTCTGAGCTaGTTGGGGAGTGAGGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: GKGTYHQASALPSLSLSLCPGLS*LGSEGR Trigger: CCTACCCTCACTCCCCAACCAGCTCAGACCCGGGCA...CAAGGATAGACTGAGGCTTGGTAATGCTGAGGCTTGGTGGTAGGTACCTTTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
||
| CDS-3UTR CCA 90 bp | GAGCTTTACGGTATAGTCTACATTTGCAGCCGTCGTTTTCTTCCCGACCCCGCCAGGCAGGTAAGCAGGTaGGGGTGTGTCAGCTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ELYGIVYICSRRFLPDPARQVSR*GCVSWH Trigger: ATGCCAGCTGACACACCCCCACCTGCTTACCTGCCT...GGCGGGGTCGGGAAGAAAACGACGGCTGCAAATGTAGACTATACCGTAAAGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
||
| CDS-3UTR CCA 90 bp | TTAAGGAGGTGCCACATTCAGCTAAGGAGGGGGCAGGATGCCTTTGATCTGGGGTCATGTTCGTGTCCATaGGCTGAGAGCCATCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LRRCHIQLRRGQDAFDLGSCSCP*AESHPG Trigger: CCCAGGATGGCTCTCAGCCCATGGACACGAACATGA...CCCCAGATCAAAGGCATCCTGCCCCCTCCTTAGCTGAATGTGGCACCTCCTTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
||
| CDS-3UTR GCA 90 bp | GTTTCTACCACGTGGGTCCCAGGAATCAAACTGCCTGCCAGAAGGCACCTAAAAAGCCGTGGTGGTAGTTaGAGTTCCGGCTCTGCACGA | + |
|
Preference number: 4 (lower is better) Translates to: VSTTWVPGIKLPARRHLKSRGGS*SSGSAR Trigger: TCGTGCAGAGCCGGAACTGCAACTACCACCACGGCT...TTTTAGGTGCCTTCTGGCAGGCAGTTTGATTCCTGGGACCCACGTGGTAGAAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
||
| CDS-3UTR CCA 90 bp | CTGACTTGTCCATCCTTCAAGTACATGCAAGGCTCGATAGTTTGCAAGAGACGGCTGCTGTTGGGGGAGTaGGGGAACGGGTGGCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LTCPSFKYMQGSIVCKRRLLLGE*GNGWLL Trigger: CAACAGCCACCCGTTCCCCCACTCCCCCAACAGCAG...CCGTCTCTTGCAAACTATCGAGCCTTGCATGTACTTGAAGGATGGACAAGTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
||
| CDS-3UTR TCA 90 bp | CCTGATGAAAGCCCACTTCAGAAAGACTATCAGCGCCAACCTTCTGCCAACACCGAACATCTCCTCTGCTaGTTTCAGCGGGCAGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PDESPLQKDYQRQPSANTEHLLC*FQRAVE Trigger: CTCCACTGCCCGCTGAAATCAGCAGAGGAGATGTTC...GGTGTTGGCAGAAGGTTGGCGCTGATAGTCTTTCTGAAGTGGGCTTTCATCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
||
| CDS-3UTR TCA 90 bp | CCTGATGAAAGCCCACTTCAGAAAGACTATCAGCGCCAACCTTCTGCCAACACCTGTTGGACGGATCTGTaGAACCATCCACCAGCACGC | + |
|
Preference number: 4 (lower is better) Translates to: PDESPLQKDYQRQPSANTCWTDL*NHPPAR Trigger: GCGTGCTGGTGGATGGTTTCACAGATCCGTCCAACA...GGTGTTGGCAGAAGGTTGGCGCTGATAGTCTTTCTGAAGTGGGCTTTCATCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
||
| CDS-3UTR TCA 90 bp | AGGGGGCAGGATGCCTTTGATCTGGGGGAGGCCGAGCAAAGCAAGGCTCTGGAACAAACTCTTGGTTGTTaGAGATTTTCAAGCTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: RGQDAFDLGEAEQSKALEQTLGC*RFSSCT Trigger: GGTGCAGCTTGAAAATCTTCAACAACCAAGAGTTTG...TTCCAGAGCCTTGCTTTGCTCGGCCTCCCCCAGATCAAAGGCATCCTGCCCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
||
| CDS-3UTR GCA 90 bp | TCCTGTCTGACTTGTCCATCCTTCAAGTACATGCAAGGCTCGATAGTTTGCAAGGGTAGGTGCTGCTGCTaGCGCCAGGAGAGTTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SCLTCPSFKYMQGSIVCKGRCCC*RQESWG Trigger: ACCCCAACTCTCCTGGCGGCAGCAGCAGCACCTACC...CTTGCAAACTATCGAGCCTTGCATGTACTTGAAGGATGGACAAGTCAGACAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
||
| CDS-3UTR GCA 90 bp | CAATGGCAGAAGTGGACAGAGATATCTGTTAAGAGCAATGACGCCGATCTTCTCGGTAGGTGCTGCTGCTaGCGCCAGGAGAGTTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QWQKWTEISVKSNDADLLGRCCC*RQESWG Trigger: ACCCCAACTCTCCTGGCGGCAGCAGCAGCACCTACC...GAGAAGATCGGCGTCATTGCTCTTAACAGATATCTCTGTCCACTTCTGCCATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
||
| CDS-3UTR GCA 90 bp | CAATGGCAGAAGTGGACAGAGATATCTGTTAAGAGCAATGACGCCGATCTTCTCGAGGGTAGGTGCTGCTaGTGCCGCCAGGAGAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QWQKWTEISVKSNDADLLEGRCC*CRQESW Trigger: CCAACTCTCCTGGCGGCAGCAGCAGCACCTACCCTC...GAGAAGATCGGCGTCATTGCTCTTAACAGATATCTCTGTCCACTTCTGCCATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
||
| CDS-3UTR GCA 90 bp | TTGGAGCTGAGGGCCAGGGCCTTGCTAACTTTTCAATTACACATAAAATGCATGGGGAGTGAGGGTAGGTaGTGCTGCTGCCGCCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LELRARALLTFQLHIKCMGSEGR*CCCRQE Trigger: CTCCTGGCGGCAGCAGCAGCACCTACCCTCACTCCC...CATGCATTTTATGTGTAATTGAAAAGTTAGCAAGGCCCTGGCCCTCAGCTCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
||
| CDS-3UTR GCA 90 bp | CTGACTTGTCCATCCTTCAAGTACATGCAAGGCTCGATAGTTTGCAAGAGACGGACCCGCTGGGGATCTTaGAGACGGTGGTGGGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LTCPSFKYMQGSIVCKRRTRWGS*RRWWGE Trigger: TTCACCCCACCACCGTCTGCAAGATCCCCAGCGGGT...CCGTCTCTTGCAAACTATCGAGCCTTGCATGTACTTGAAGGATGGACAAGTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
||
| CDS-3UTR CCA 90 bp | CTGACTTGTCCATCCTTCAAGTACATGCAAGGCTCGATAGTTTGCAAGAGACGGGAGTGGGGGAACGGGTaGCTGTTGGGCTGCTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LTCPSFKYMQGSIVCKRREWGNG*LLGCWK Trigger: TTTCCAGCAGCCCAACAGCCACCCGTTCCCCCACTC...CCGTCTCTTGCAAACTATCGAGCCTTGCATGTACTTGAAGGATGGACAAGTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
||
| CDS-3UTR TCA 90 bp | ATATTAAGGAGGTGCCACATTCAGCTAAGGAGGGGGCAGGATGCCTTTGATCTGGAACATCTCCTCTGCTaGTTTCAGCGGGCAGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ILRRCHIQLRRGQDAFDLEHLLC*FQRAVE Trigger: CTCCACTGCCCGCTGAAATCAGCAGAGGAGATGTTC...CAGATCAAAGGCATCCTGCCCCCTCCTTAGCTGAATGTGGCACCTCCTTAATAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
||
| CDS-3UTR TCA 90 bp | AGAGGACCTGAGTTTGGTTCCAGGCATCCACGACTGCTCACAACAATCTACATCTGTTGGACGGATCTGTaGAACCATCCACCAGCACGC | + |
|
Preference number: 4 (lower is better) Translates to: RGPEFGSRHPRLLTTIYICWTDL*NHPPAR Trigger: GCGTGCTGGTGGATGGTTTCACAGATCCGTCCAACA...GATGTAGATTGTTGTGAGCAGTCGTGGATGCCTGGAACCAAACTCAGGTCCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
||
| CDS-3UTR GCA 90 bp | CAATGGCAGAAGTGGACAGAGATATCTGTTAAGAGCAATGACGCCGATCTTCTCAGTGAGGGTAGGTGCTaGTGCTGCCGCCAGGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: QWQKWTEISVKSNDADLLSEGRC*CCRQES Trigger: ACTCTCCTGGCGGCAGCAGCAGCACCTACCCTCACT...GAGAAGATCGGCGTCATTGCTCTTAACAGATATCTCTGTCCACTTCTGCCATTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
||
| CDS-3UTR CCA 90 bp | GCTGTTTCTACCACGTGGGTCCCAGGAATCAAACTGCCTGCCAGAAGGCACCTAAGAGCACCAGTGTTTTaGTTCCTCGTAAGCAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: AVSTTWVPGIKLPARRHLRAPVF*FLVSNC Trigger: GCAGTTGCTTACGAGGAACCAAAACACTGGTGCTCT...TAGGTGCCTTCTGGCAGGCAGTTTGATTCCTGGGACCCACGTGGTAGAAACAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
||
| CDS-3UTR CCA 90 bp | CTGACTTGTCCATCCTTCAAGTACATGCAAGGCTCGATAGTTTGCAAGAGACGGTCTTGCAGACGGTGGTaGGGTGAAAGCCGTGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LTCPSFKYMQGSIVCKRRSCRRW*GESRGG Trigger: ACCACCACGGCTTTCACCCCACCACCGTCTGCAAGA...CCGTCTCTTGCAAACTATCGAGCCTTGCATGTACTTGAAGGATGGACAAGTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
||
| CDS-3UTR CCA 90 bp | CTGACTTGTCCATCCTTCAAGTACATGCAAGGCTCGATAGTTTGCAAGAGACGGGGATCTTGCAGACGGTaGTGGGGTGAAAGCCGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LTCPSFKYMQGSIVCKRRGSCRR*WGESRG Trigger: ACCACGGCTTTCACCCCACCACCGTCTGCAAGATCC...CCGTCTCTTGCAAACTATCGAGCCTTGCATGTACTTGAAGGATGGACAAGTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
||
| CDS-3UTR TCA 90 bp | ACAAGGACTGGCTCCTTGGTCACATTTGCACATAGTATACAGGCCAGTTTCTTTGGGAGCGAGGAATGGTaGCGCAGTTACTCGGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: TRTGSLVTFAHSIQASFFGSEEW*RSYSAV Trigger: GACAGCCGAGTAACTGCGTCACCATTCCTCGCTCCC...AAAGAAACTGGCCTGTATACTATGTGCAAATGTGACCAAGGAGCCAGTCCTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
||
| CDS-3UTR GCA 90 bp | TTGTCAGTTTCTCAATCCAATAGTTGGTCACAGAGGTCAAGTATTATCGTGGCTGGGAGTGAGGGTAGGTaGTGCTGCTGCCGCCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LSVSQSNSWSQRSSIIVAGSEGR*CCCRQE Trigger: CTCCTGGCGGCAGCAGCAGCACCTACCCTCACTCCC...AGCCACGATAATACTTGACCTCTGTGACCAACTATTGGATTGAGAAACTGACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
||
| CDS-3UTR GCA 90 bp | CAATGGCAGAAGTGGACAGAGATATCTGTTAAGAGCAATGACGCCGATCTTCTCGCATCTGAAAAGGGCTaGCCGGGTCTGAGCTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QWQKWTEISVKSNDADLLASEKG*PGLSWL Trigger: CAACCAGCTCAGACCCGGGCAGCCCTTTTCAGATGC...GAGAAGATCGGCGTCATTGCTCTTAACAGATATCTCTGTCCACTTCTGCCATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
||
| CDS-3UTR GCA 90 bp | TTGGAGCTGAGGGCCAGGGCCTTGCTAACTTTTCAATTACACATAAAATGCATGACCCGCTGGGGATCTTaGAGACGGTGGTGGGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LELRARALLTFQLHIKCMTRWGS*RRWWGE Trigger: TTCACCCCACCACCGTCTGCAAGATCCCCAGCGGGT...CATGCATTTTATGTGTAATTGAAAAGTTAGCAAGGCCCTGGCCCTCAGCTCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
||
| CDS-3UTR CCA 90 bp | GTAGCACACAGCCTAGAATCCTACCTAGCCACTCCAGGTGCAGAGCTGACAGATTCTCCAGCTCTTCCATaGCCCCTTTCTTCTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VAHSLESYLATPGAELTDSPALP*PLSSSS Trigger: TGAAGAAGAAGAAAGGGGCCATGGAAGAGCTGGAGA...ATCTGTCAGCTCTGCACCTGGAGTGGCTAGGTAGGATTCTAGGCTGTGTGCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
||
| CDS-3UTR CCA 90 bp | CAATGGCAGAAGTGGACAGAGATATCTGTTAAGAGCAATGACGCCGATCTTCTCAGGCAGGTAAGCAGGTaGGGGTGTGTCAGCTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QWQKWTEISVKSNDADLLRQVSR*GCVSWH Trigger: ATGCCAGCTGACACACCCCCACCTGCTTACCTGCCT...GAGAAGATCGGCGTCATTGCTCTTAACAGATATCTCTGTCCACTTCTGCCATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
||
| CDS-3UTR CCA 90 bp | TCCTGTCTGACTTGTCCATCCTTCAAGTACATGCAAGGCTCGATAGTTTGCAAGACGGTCTCGAACCCGTaGTTCACAGACTGCGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SCLTCPSFKYMQGSIVCKTVSNP*FTDCAS Trigger: ACTGGCGCAGTCTGTGAACCACGGGTTCGAGACCGT...CTTGCAAACTATCGAGCCTTGCATGTACTTGAAGGATGGACAAGTCAGACAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
||
| 3UTR CAA 72 bp | TCGTGGCTCCTTCGTCAGGTCTCCATCCTGTCTGACTaGTCCATCCTTCAAGTACATGCAAGGCTCGATAGT | + |
|
Preference number: 4 (lower is better) Translates to: SWLLRQVSILSD*SILQVHARLDS Trigger: ACTATCGAGCCTTGCATGTACTTGAAGGATGGACAAGTCAGACAGGATGGAGACCTGACGAAGGAGCCACGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
||
| CDS-3UTR TCA 90 bp | CTGCTTAACTGTGCCGTGGAGCGGATAAGACAGAAGAAAAGAAGTCAGATAAAAGGGAGCGAGGAATGGTaGCGCAGTTACTCGGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LLNCAVERIRQKKRSQIKGSEEW*RSYSAV Trigger: GACAGCCGAGTAACTGCGTCACCATTCCTCGCTCCC...TTTTATCTGACTTCTTTTCTTCTGTCTTATCCGCTCCACGGCACAGTTAAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
||
| CDS-3UTR TCA 90 bp | CAGTTTCTCAATCCAATAGTTGGTCACAGAGGTCAAGTATTATCGTGGCTCCTTGTGTCAGCTGGCATCTaGAAAGGGCTGCCCGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QFLNPIVGHRGQVLSWLLVSAGI*KGLPGS Trigger: AGACCCGGGCAGCCCTTTTCAGATGCCAGCTGACAC...AAGGAGCCACGATAATACTTGACCTCTGTGACCAACTATTGGATTGAGAAACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
||
| CDS-3UTR TCA 90 bp | CAGTTTCTCAATCCAATAGTTGGTCACAGAGGTCAAGTATTATCGTGGCTCCTTTTCGTGTCCATGGGCTaGGAGCCATCCTGGGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: QFLNPIVGHRGQVLSWLLFVSMG*EPSWAM Trigger: CATGGCCCAGGATGGCTCTCAGCCCATGGACACGAA...AAGGAGCCACGATAATACTTGACCTCTGTGACCAACTATTGGATTGAGAAACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
||
| CDS-3UTR GCA 90 bp | CTGCTTAACTGTGCCGTGGAGCGGATAAGACAGAAGAAAAGAAGTCAGATAAAAGGATTGTACTCGCTGTaGCTCGGAACCAGCACCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LLNCAVERIRQKKRSQIKGLYSL*LGTSTG Trigger: GCCGGTGCTGGTTCCGAGGCACAGCGAGTACAATCC...TTTTATCTGACTTCTTTTCTTCTGTCTTATCCGCTCCACGGCACAGTTAAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
||
| CDS-3UTR GCA 90 bp | CTGACTTGTCCATCCTTCAAGTACATGCAAGGCTCGATAGTTTGCAAGAGACGGCATTTTGTCCCAGGTTaGGGAACTGAGCCAGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LTCPSFKYMQGSIVCKRRHFVPG*GTEPEG Trigger: GCCTTCTGGCTCAGTTCCGCAACCTGGGACAAAATG...CCGTCTCTTGCAAACTATCGAGCCTTGCATGTACTTGAAGGATGGACAAGTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
||
| CDS-3UTR GCA 90 bp | TTGTCAGTTTCTCAATCCAATAGTTGGTCACAGAGGTCAAGTATTATCGTGGCTGAGGGTAGGTGCTGCTaGTGCCGCCAGGAGAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSVSQSNSWSQRSSIIVAEGRCC*CRQESW Trigger: CCAACTCTCCTGGCGGCAGCAGCAGCACCTACCCTC...AGCCACGATAATACTTGACCTCTGTGACCAACTATTGGATTGAGAAACTGACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
||
| CDS-3UTR GCA 90 bp | ATCCTGTCTGACTTGTCCATCCTTCAAGTACATGCAAGGCTCGATAGTTTGCAAAGCCGTGGTGGTAGTTaGAGTTCCGGCTCTGCACGA | + |
|
Preference number: 4 (lower is better) Translates to: ILSDLSILQVHARLDSLQSRGGS*SSGSAR Trigger: TCGTGCAGAGCCGGAACTGCAACTACCACCACGGCT...TTGCAAACTATCGAGCCTTGCATGTACTTGAAGGATGGACAAGTCAGACAGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
||
| CDS-3UTR CCA 90 bp | TTGTCAGTTTCTCAATCCAATAGTTGGTCACAGAGGTCAAGTATTATCGTGGCTAGTTCATGGTGGCTCTaGAGGTCGGGCCAGCGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LSVSQSNSWSQRSSIIVASSWWL*RSGQRH Trigger: GTGGCGCTGGCCCGACCTCCAGAGCCACCATGAACT...AGCCACGATAATACTTGACCTCTGTGACCAACTATTGGATTGAGAAACTGACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
||
| CDS-3UTR CCA 90 bp | AGAGGACCTGAGTTTGGTTCCAGGCATCCACGACTGCTCACAACAATCTACATCGAACGTGGCGTTCAGTaGCATGTGAGGCTCATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RGPEFGSRHPRLLTTIYIERGVQ*HVRLIL Trigger: CAAAATGAGCCTCACATGCCACTGAACGCCACGTTC...GATGTAGATTGTTGTGAGCAGTCGTGGATGCCTGGAACCAAACTCAGGTCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
||
| CDS-3UTR CCA 90 bp | TTGTCAGTTTCTCAATCCAATAGTTGGTCACAGAGGTCAAGTATTATCGTGGCTCTGGTGGACGAGGCGTaGAACGCTTCACCCACACGG | + |
|
Preference number: 4 (lower is better) Translates to: LSVSQSNSWSQRSSIIVALVDEA*NASPTR Trigger: CCGTGTGGGTGAAGCGTTCCACGCCTCGTCCACCAG...AGCCACGATAATACTTGACCTCTGTGACCAACTATTGGATTGAGAAACTGACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
||
| CDS-3UTR TCA 90 bp | TTGGAGCTGAGGGCCAGGGCCTTGCTAACTTTTCAATTACACATAAAATGCATGGCGTTCAGTGGCATGTaGGGCTCATTTTGTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LELRARALLTFQLHIKCMAFSGM*GSFCPR Trigger: CCTGGGACAAAATGAGCCTCACATGCCACTGAACGC...CATGCATTTTATGTGTAATTGAAAAGTTAGCAAGGCCCTGGCCCTCAGCTCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
||
| CDS-3UTR GCA 90 bp | TTGTCAGTTTCTCAATCCAATAGTTGGTCACAGAGGTCAAGTATTATCGTGGCTAGTGAGGGTAGGTGCTaGTGCTGCCGCCAGGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LSVSQSNSWSQRSSIIVASEGRC*CCRQES Trigger: ACTCTCCTGGCGGCAGCAGCAGCACCTACCCTCACT...AGCCACGATAATACTTGACCTCTGTGACCAACTATTGGATTGAGAAACTGACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
||
| CDS-3UTR GCA 90 bp | CAGTTTCTCAATCCAATAGTTGGTCACAGAGGTCAAGTATTATCGTGGCTCCTTGTGCTGGTAACATCCTaGCGGTGGTATTCGGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: QFLNPIVGHRGQVLSWLLVLVTS*RWYSAP Trigger: GGGAGCCGAATACCACCGGCAGGATGTTACCAGCAC...AAGGAGCCACGATAATACTTGACCTCTGTGACCAACTATTGGATTGAGAAACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
||
| CDS-3UTR CCA 90 bp | AAAACTGAAACACAGCAAATTCAGACACCAGCTTGTCTGTTTAAGGCAGCAAGCAGAGGCTTCAGTTCATaGTGGCTCTGGAGGTCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KTETQQIQTPACLFKAASRGFSS*WLWRSG Trigger: GCCCGACCTCCAGAGCCACCATGAACTGAAGCCTCT...GCTTGCTGCCTTAAACAGACAAGCTGGTGTCTGAATTTGCTGTGTTTCAGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
||
| CDS-3UTR CCA 90 bp | CTGCTTAACTGTGCCGTGGAGCGGATAAGACAGAAGAAAAGAAGTCAGATAAAAGGAACGGGTGGCTGTTaGGCTGCTGGAAAGAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLNCAVERIRQKKRSQIKGTGGC*AAGKSL Trigger: CAGACTCTTTCCAGCAGCCCAACAGCCACCCGTTCC...TTTTATCTGACTTCTTTTCTTCTGTCTTATCCGCTCCACGGCACAGTTAAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
||
| CDS-3UTR CCA 90 bp | ATCCTGTCTGACTTGTCCATCCTTCAAGTACATGCAAGGCTCGATAGTTTGCAATCATGTTCGTGTCCATaGGCTGAGAGCCATCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ILSDLSILQVHARLDSLQSCSCP*AESHPG Trigger: CCCAGGATGGCTCTCAGCCCATGGACACGAACATGA...TTGCAAACTATCGAGCCTTGCATGTACTTGAAGGATGGACAAGTCAGACAGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
||
| CDS-3UTR CCA 90 bp | TTGGAGCTGAGGGCCAGGGCCTTGCTAACTTTTCAATTACACATAAAATGCATGGATTTCAGCGGGCAGTaGAGGCGCCATCATGTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: LELRARALLTFQLHIKCMDFSGQ*RRHHVR Trigger: ACGAACATGATGGCGCCTCCACTGCCCGCTGAAATC...CATGCATTTTATGTGTAATTGAAAAGTTAGCAAGGCCCTGGCCCTCAGCTCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
||
| CDS-3UTR CCA 90 bp | TTACTGGAGCCAAAACTTCTTCAAGAATTCAATAATCACAGTCCATCAGGGACTCTGGTGGACGAGGCGTaGAACGCTTCACCCACACGG | + |
|
Preference number: 4 (lower is better) Translates to: LLEPKLLQEFNNHSPSGTLVDEA*NASPTR Trigger: CCGTGTGGGTGAAGCGTTCCACGCCTCGTCCACCAG...AGTCCCTGATGGACTGTGATTATTGAATTCTTGAAGAAGTTTTGGCTCCAGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
||
| CDS-3UTR TCA 90 bp | CCTGATGAAAGCCCACTTCAGAAAGACTATCAGCGCCAACCTTCTGCCAACACCAGCTGGACTTGTGAATaGAAACAAGCTGGTCACATT | + |
|
Preference number: 4 (lower is better) Translates to: PDESPLQKDYQRQPSANTSWTCE*KQAGHI Trigger: AATGTGACCAGCTTGTTTTCATTCACAAGTCCAGCT...GGTGTTGGCAGAAGGTTGGCGCTGATAGTCTTTCTGAAGTGGGCTTTCATCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
||
| CDS-3UTR TCA 90 bp | GTTTCTACCACGTGGGTCCCAGGAATCAAACTGCCTGCCAGAAGGCACCTAAAAAGCTGGACTTGTGAATaGAAACAAGCTGGTCACATT | + |
|
Preference number: 4 (lower is better) Translates to: VSTTWVPGIKLPARRHLKSWTCE*KQAGHI Trigger: AATGTGACCAGCTTGTTTTCATTCACAAGTCCAGCT...TTTTAGGTGCCTTCTGGCAGGCAGTTTGATTCCTGGGACCCACGTGGTAGAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
||
| CDS-3UTR TCA 90 bp | CAGTTTCTCAATCCAATAGTTGGTCACAGAGGTCAAGTATTATCGTGGCTCCTTGCGTTCAGTGGCATGTaGGGCTCATTTTGTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QFLNPIVGHRGQVLSWLLAFSGM*GSFCPR Trigger: CCTGGGACAAAATGAGCCTCACATGCCACTGAACGC...AAGGAGCCACGATAATACTTGACCTCTGTGACCAACTATTGGATTGAGAAACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
||
| CDS-3UTR TCA 90 bp | ATCCTGTCTGACTTGTCCATCCTTCAAGTACATGCAAGGCTCGATAGTTTGCAAGACTGCGCCAGTAGCTaGGCAAACTCTTGGTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ILSDLSILQVHARLDSLQDCASS*ANSWLL Trigger: CAACAACCAAGAGTTTGCTCAGCTACTGGCGCAGTC...TTGCAAACTATCGAGCCTTGCATGTACTTGAAGGATGGACAAGTCAGACAGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
||
| CDS-3UTR TCA 90 bp | TTGGAGCTGAGGGCCAGGGCCTTGCTAACTTTTCAATTACACATAAAATGCATGGACTGCGCCAGTAGCTaGGCAAACTCTTGGTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LELRARALLTFQLHIKCMDCASS*ANSWLL Trigger: CAACAACCAAGAGTTTGCTCAGCTACTGGCGCAGTC...CATGCATTTTATGTGTAATTGAAAAGTTAGCAAGGCCCTGGCCCTCAGCTCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
||
| CDS-3UTR CCA 90 bp | AGCAAAGAGCATATGCCTGCCATCATTCTGACAGTAATACAGCCAGCATACAGTAAGAGTCTGGGAACGTaGCGTTCAGTGGCATGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SKEHMPAIILTVIQPAYSKSLGT*RSVACE Trigger: CTCACATGCCACTGAACGCCACGTTCCCAGACTCTT...ACTGTATGCTGGCTGTATTACTGTCAGAATGATGGCAGGCATATGCTCTTTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
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| CDS-3UTR CCA 90 bp | CAGTTTCTCAATCCAATAGTTGGTCACAGAGGTCAAGTATTATCGTGGCTCCTTTGGCTGTTGGGCTGCTaGAAAGAGTCTGGGAACGTG | + |
|
Preference number: 4 (lower is better) Translates to: QFLNPIVGHRGQVLSWLLWLLGC*KESGNV Trigger: CACGTTCCCAGACTCTTTCCAGCAGCCCAACAGCCA...AAGGAGCCACGATAATACTTGACCTCTGTGACCAACTATTGGATTGAGAAACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
||
| CDS-3UTR CCA 90 bp | TTAACTGTTAGTTGTGTAATCAGTAGGAAACAAATGCCAAGGAGACAGCTTACTTGCCGCCAGGAGAGTTaGGGTAGCTGCTGTTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LTVSCVISRKQMPRRQLTCRQES*GSCCWG Trigger: CCCCCAACAGCAGCTACCCCAACTCTCCTGGCGGCA...AGTAAGCTGTCTCCTTGGCATTTGTTTCCTACTGATTACACAACTAACAGTTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
||
| CDS-3UTR CCA 90 bp | AAAACTGAAACACAGCAAATTCAGACACCAGCTTGTCTGTTTAAGGCAGCAAGCGATTTCAGCGGGCAGTaGAGGCGCCATCATGTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: KTETQQIQTPACLFKAASDFSGQ*RRHHVR Trigger: ACGAACATGATGGCGCCTCCACTGCCCGCTGAAATC...GCTTGCTGCCTTAAACAGACAAGCTGGTGTCTGAATTTGCTGTGTTTCAGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
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| CDS-3UTR CCA 90 bp | AAAACTGAAACACAGCAAATTCAGACACCAGCTTGTCTGTTTAAGGCAGCAAGCTGGGGTGAGCCCATCTaGGTCAGAACCTTATCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KTETQQIQTPACLFKAASWGEPI*VRTLSS Trigger: GCTGGATAAGGTTCTGACCCAGATGGGCTCACCCCA...GCTTGCTGCCTTAAACAGACAAGCTGGTGTCTGAATTTGCTGTGTTTCAGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
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| CDS-3UTR TCA 90 bp | AAAACTGAAACACAGCAAATTCAGACACCAGCTTGTCTGTTTAAGGCAGCAAGCAATAGGATTGTGGGGTaGGCCCATCTGGGTCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: KTETQQIQTPACLFKAASNRIVG*AHLGQN Trigger: GTTCTGACCCAGATGGGCTCACCCCACAATCCTATT...GCTTGCTGCCTTAAACAGACAAGCTGGTGTCTGAATTTGCTGTGTTTCAGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
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| CDS-3UTR CCA 90 bp | AGCAAAGAGCATATGCCTGCCATCATTCTGACAGTAATACAGCCAGCATACAGTGAACGTGGCGTTCAGTaGCATGTGAGGCTCATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SKEHMPAIILTVIQPAYSERGVQ*HVRLIL Trigger: CAAAATGAGCCTCACATGCCACTGAACGCCACGTTC...ACTGTATGCTGGCTGTATTACTGTCAGAATGATGGCAGGCATATGCTCTTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
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| CDS-3UTR CCA 90 bp | TTACTGGAGCCAAAACTTCTTCAAGAATTCAATAATCACAGTCCATCAGGGACTGGAACGGGTGGCTGTTaGGCTGCTGGAAAGAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLEPKLLQEFNNHSPSGTGTGGC*AAGKSL Trigger: CAGACTCTTTCCAGCAGCCCAACAGCCACCCGTTCC...AGTCCCTGATGGACTGTGATTATTGAATTCTTGAAGAAGTTTTGGCTCCAGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
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| CDS-3UTR CCA 90 bp | ATCCTGTCTGACTTGTCCATCCTTCAAGTACATGCAAGGCTCGATAGTTTGCAAGATGAAATAGGATTGTaGGGTGAGCCCATCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ILSDLSILQVHARLDSLQDEIGL*GEPIWV Trigger: GACCCAGATGGGCTCACCCCACAATCCTATTTCATC...TTGCAAACTATCGAGCCTTGCATGTACTTGAAGGATGGACAAGTCAGACAGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
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| 3UTR CAA 72 bp | GTGAACAGTGAACAAGGACTGGCTCCTTGGTCACATTaGCACATAGTATACAGGCCAGTTTCTTTAAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VNSEQGLAPWSH*HIVYRPVSLRG Trigger: GCCCCTTAAAGAAACTGGCCTGTATACTATGTGCAAATGTGACCAAGGAGCCAGTCCTTGTTCACTGTTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
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| CDS-3UTR CCA 90 bp | CTCTTGTTAGAAATTTGGAAAACAACAACAACAACAACAACAACAACAGTAGCCGAGTGGGGGAACGGGTaGCTGTTGGGCTGCTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLLEIWKTTTTTTTTTVAEWGNG*LLGCWK Trigger: TTTCCAGCAGCCCAACAGCCACCCGTTCCCCCACTC...GGCTACTGTTGTTGTTGTTGTTGTTGTTGTTGTTTTCCAAATTTCTAACAAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
||
| CDS-3UTR TCA 90 bp | TTGTCAGTTTCTCAATCCAATAGTTGGTCACAGAGGTCAAGTATTATCGTGGCTTATAGTGGTAGGGGTTaGTGCAGACCTCCTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSVSQSNSWSQRSSIIVAYSGRG*CRPPSA Trigger: AGCAGAAGGAGGTCTGCATCAACCCCTACCACTATA...AGCCACGATAATACTTGACCTCTGTGACCAACTATTGGATTGAGAAACTGACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
||
| CDS-3UTR TCA 90 bp | TCCTGTCTGACTTGTCCATCCTTCAAGTACATGCAAGGCTCGATAGTTTGCAAGCAAACTCTTGGTTGTTaGAGATTTTCAAGCTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: SCLTCPSFKYMQGSIVCKQTLGC*RFSSCT Trigger: GGTGCAGCTTGAAAATCTTCAACAACCAAGAGTTTG...CTTGCAAACTATCGAGCCTTGCATGTACTTGAAGGATGGACAAGTCAGACAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
||
| CDS-3UTR CCA 90 bp | AAAACTGAAACACAGCAAATTCAGACACCAGCTTGTCTGTTTAAGGCAGCAAGCAGAGCACCAGTGTTTTaGTTCCTCGTAAGCAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: KTETQQIQTPACLFKAASRAPVF*FLVSNC Trigger: GCAGTTGCTTACGAGGAACCAAAACACTGGTGCTCT...GCTTGCTGCCTTAAACAGACAAGCTGGTGTCTGAATTTGCTGTGTTTCAGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
||
| CDS-3UTR CCA 90 bp | CTCTTGTTAGAAATTTGGAAAACAACAACAACAACAACAACAACAACAGTAGCCACGGTCTCGAACCCGTaGTTCACAGACTGCGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLLEIWKTTTTTTTTTVATVSNP*FTDCAS Trigger: ACTGGCGCAGTCTGTGAACCACGGGTTCGAGACCGT...GGCTACTGTTGTTGTTGTTGTTGTTGTTGTTGTTTTCCAAATTTCTAACAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
||
| 3UTR CAA 72 bp | TCTGTTAAGAGCAATGACGCCGATCTTCTCCTTTCTTaGATATTACAGATACTTTTGGAGCTGAGGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SVKSNDADLLLS*ILQILLELRAR Trigger: CCTGGCCCTCAGCTCCAAAAGTATCTGTAATATCAAAGAAAGGAGAAGATCGGCGTCATTGCTCTTAACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
||
| CDS-3UTR GCA 90 bp | TTAACTGTTAGTTGTGTAATCAGTAGGAAACAAATGCCAAGGAGACAGCTTACTCATTTTGTCCCAGGTTaGGGAACTGAGCCAGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LTVSCVISRKQMPRRQLTHFVPG*GTEPEG Trigger: GCCTTCTGGCTCAGTTCCGCAACCTGGGACAAAATG...AGTAAGCTGTCTCCTTGGCATTTGTTTCCTACTGATTACACAACTAACAGTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
||
| CDS-3UTR CCA 90 bp | TTGTCAGTTTCTCAATCCAATAGTTGGTCACAGAGGTCAAGTATTATCGTGGCTTCTCCAGCTCTTCCATaGCCCCTTTCTTCTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSVSQSNSWSQRSSIIVASPALP*PLSSSS Trigger: TGAAGAAGAAGAAAGGGGCCATGGAAGAGCTGGAGA...AGCCACGATAATACTTGACCTCTGTGACCAACTATTGGATTGAGAAACTGACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
||
| CDS-3UTR CCA 90 bp | CTCTTGTTAGAAATTTGGAAAACAACAACAACAACAACAACAACAACAGTAGCCAAGAGTCTGGGAACGTaGCGTTCAGTGGCATGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLLEIWKTTTTTTTTTVAKSLGT*RSVACE Trigger: CTCACATGCCACTGAACGCCACGTTCCCAGACTCTT...GGCTACTGTTGTTGTTGTTGTTGTTGTTGTTGTTTTCCAAATTTCTAACAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
||
| 3UTR CAA 72 bp | TACAACAGAATGTCACAATGTAAACTGAAAGGGTTCTaGCTATCAACCAAGGCTTGTCAGTTTCTCAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: YNRMSQCKLKGF*LSTKACQFLNP Trigger: TGGATTGAGAAACTGACAAGCCTTGGTTGATAGCAAGAACCCTTTCAGTTTACATTGTGACATTCTGTTGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
||
| CDS CCA 90 bp | GTAAGCAACTGCCTGAACATCTCCTCTGCTGATTTCAGCGGGCAGTaGAGGCGCCATCATGTTCGTGTCCATGGGCTGAGAGCCATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: VSNCLNISSADFSGQ*RRHHVRVHGLRAIL Trigger: CAGGATGGCTCTCAGCCCATGGACACGAACATGATGGCGCCTCCACTGCCCGCTGAAATCAGCAGAGGAGATGTTCAGGCAGTTGCTTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066091.14 ENSMUST00000109885.8 |
||
| CDS-3UTR CAA 90 bp | TATGGGGCTGGGGACACAGCACAGTGGGTGGAGCGCTGGCCTCGTAGAGCACAGCGAATAGTGCACATTTaGGTGAGTTCATACACGGTC | + |
|
Preference number: 5 (lower is better) Translates to: YGAGDTAQWVERWPRRAQRIVHI*VSSYTV Trigger: GACCGTGTATGAACTCACCAAAATGTGCACTATTCG...CTGTGCTCTACGAGGCCAGCGCTCCACCCACTGTGCTGTGTCCCCAGCCCCATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
||
| CDS TCA 90 bp | AGAGCAAGCCAAGGCAGAAGCGGTTCTTATTGTTGGACGGATCTGTaGAACCATCCACCAGCACGCTGGTGGACGAGGCGTGGAACGCTT | + |
|
Preference number: 5 (lower is better) Translates to: RASQGRSGSYCWTDL*NHPPARWWTRRGTL Trigger: AAGCGTTCCACGCCTCGTCCACCAGCGTGCTGGTGGATGGTTTCACAGATCCGTCCAACAATAAGAACCGCTTCTGCCTTGGCTTGCTCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066091.14 ENSMUST00000109885.8 |
||
| CDS-3UTR CAA 90 bp | GAGCTTTACGGTATAGTCTACATTTGCAGCCGTCGTTTTCTTCCCGACCCCGCCCATGTGAGGCTCATTTaGTCCCAGGTTGCGGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: ELYGIVYICSRRFLPDPAHVRLI*SQVAEL Trigger: CAGTTCCGCAACCTGGGACAAAATGAGCCTCACATG...GGCGGGGTCGGGAAGAAAACGACGGCTGCAAATGTAGACTATACCGTAAAGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
||
| CDS-3UTR CAA 90 bp | CTGCTTAACTGTGCCGTGGAGCGGATAAGACAGAAGAAAAGAAGTCAGATAAAACCGGGTCTGAGCTGGTaGGGGAGTGAGGGTAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LLNCAVERIRQKKRSQIKPGLSW*GSEGRC Trigger: GCACCTACCCTCACTCCCCAACCAGCTCAGACCCGG...TTTTATCTGACTTCTTTTCTTCTGTCTTATCCGCTCCACGGCACAGTTAAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
||
| CDS-3UTR CAA 90 bp | GTTTCTACCACGTGGGTCCCAGGAATCAAACTGCCTGCCAGAAGGCACCTAAAAGAATTCCGGTTAACGTaGGAGAGCAAGCCAAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VSTTWVPGIKLPARRHLKEFRLT*ESKPRQ Trigger: CTGCCTTGGCTTGCTCTCCAACGTTAACCGGAATTC...TTTTAGGTGCCTTCTGGCAGGCAGTTTGATTCCTGGGACCCACGTGGTAGAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
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| CDS-3UTR CAA 90 bp | CCTGATGAAAGCCCACTTCAGAAAGACTATCAGCGCCAACCTTCTGCCAACACCACGGATGAAATAGGATaGTGGGGTGAGCCCATCTGG | + |
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Preference number: 5 (lower is better) Translates to: PDESPLQKDYQRQPSANTTDEIG*WGEPIW Trigger: CCAGATGGGCTCACCCCACAATCCTATTTCATCCGT...GGTGTTGGCAGAAGGTTGGCGCTGATAGTCTTTCTGAAGTGGGCTTTCATCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
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| CDS-3UTR CAA 90 bp | GCTGTTTCTACCACGTGGGTCCCAGGAATCAAACTGCCTGCCAGAAGGCACCTACAGAAGCGGTTCTTATaGTTGGACGGATCTGTGAAA | + |
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Preference number: 5 (lower is better) Translates to: AVSTTWVPGIKLPARRHLQKRFL*LDGSVK Trigger: TTTCACAGATCCGTCCAACAATAAGAACCGCTTCTG...TAGGTGCCTTCTGGCAGGCAGTTTGATTCCTGGGACCCACGTGGTAGAAACAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
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| CDS-3UTR CAA 90 bp | CCTGATGAAAGCCCACTTCAGAAAGACTATCAGCGCCAACCTTCTGCCAACACCCAGAAGCGGTTCTTATaGTTGGACGGATCTGTGAAA | + |
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Preference number: 5 (lower is better) Translates to: PDESPLQKDYQRQPSANTQKRFL*LDGSVK Trigger: TTTCACAGATCCGTCCAACAATAAGAACCGCTTCTG...GGTGTTGGCAGAAGGTTGGCGCTGATAGTCTTTCTGAAGTGGGCTTTCATCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
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| CDS-3UTR CAA 90 bp | CTCTTGTTAGAAATTTGGAAAACAACAACAACAACAACAACAACAACAGTAGCCCCGGGTCTGAGCTGGTaGGGGAGTGAGGGTAGGTGC | + |
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Preference number: 5 (lower is better) Translates to: LLLEIWKTTTTTTTTTVAPGLSW*GSEGRC Trigger: GCACCTACCCTCACTCCCCAACCAGCTCAGACCCGG...GGCTACTGTTGTTGTTGTTGTTGTTGTTGTTGTTTTCCAAATTTCTAACAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
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| CDS-3UTR CAA 90 bp | CTGCTTAACTGTGCCGTGGAGCGGATAAGACAGAAGAAAAGAAGTCAGATAAAAGAATTCCGGTTAACGTaGGAGAGCAAGCCAAGGCAG | + |
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Preference number: 5 (lower is better) Translates to: LLNCAVERIRQKKRSQIKEFRLT*ESKPRQ Trigger: CTGCCTTGGCTTGCTCTCCAACGTTAACCGGAATTC...TTTTATCTGACTTCTTTTCTTCTGTCTTATCCGCTCCACGGCACAGTTAAGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
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| CDS-3UTR CAA 90 bp | ATCCTGTCTGACTTGTCCATCCTTCAAGTACATGCAAGGCTCGATAGTTTGCAAAAGCGGTTCTTATTGTaGGACGGATCTGTGAAACCA | + |
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Preference number: 5 (lower is better) Translates to: ILSDLSILQVHARLDSLQKRFLL*DGSVKP Trigger: TGGTTTCACAGATCCGTCCAACAATAAGAACCGCTT...TTGCAAACTATCGAGCCTTGCATGTACTTGAAGGATGGACAAGTCAGACAGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
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| CDS-3UTR CAA 90 bp | ACAAGGACTGGCTCCTTGGTCACATTTGCACATAGTATACAGGCCAGTTTCTTTGCAAACTCTTGGTTGTaGAAGATTTTCAAGCTGCAC | + |
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Preference number: 5 (lower is better) Translates to: TRTGSLVTFAHSIQASFFANSWL*KIFKLH Trigger: GTGCAGCTTGAAAATCTTCAACAACCAAGAGTTTGC...AAAGAAACTGGCCTGTATACTATGTGCAAATGTGACCAAGGAGCCAGTCCTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
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| CDS-3UTR CAA 90 bp | AAAACTGAAACACAGCAAATTCAGACACCAGCTTGTCTGTTTAAGGCAGCAAGCCGAATAGTGCACATTTaGGTGAGTTCATACACGGTC | + |
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Preference number: 5 (lower is better) Translates to: KTETQQIQTPACLFKAASRIVHI*VSSYTV Trigger: GACCGTGTATGAACTCACCAAAATGTGCACTATTCG...GCTTGCTGCCTTAAACAGACAAGCTGGTGTCTGAATTTGCTGTGTTTCAGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
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| CDS-3UTR CAA 90 bp | CTCTTGTTAGAAATTTGGAAAACAACAACAACAACAACAACAACAACAGTAGCCCATGTGAGGCTCATTTaGTCCCAGGTTGCGGAACTG | + |
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Preference number: 5 (lower is better) Translates to: LLLEIWKTTTTTTTTTVAHVRLI*SQVAEL Trigger: CAGTTCCGCAACCTGGGACAAAATGAGCCTCACATG...GGCTACTGTTGTTGTTGTTGTTGTTGTTGTTGTTTTCCAAATTTCTAACAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109885.8 |
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| CDS-3UTR CAA 90 bp | AAAACTGAAACACAGCAAATTCAGACACCAGCTTGTCTGTTTAAGGCAGCAAGCGCAAACTCTTGGTTGTaGAAGATTTTCAAGCTGCAC | + |
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Preference number: 5 (lower is better) Translates to: KTETQQIQTPACLFKAASANSWL*KIFKLH Trigger: GTGCAGCTTGAAAATCTTCAACAACCAAGAGTTTGC...GCTTGCTGCCTTAAACAGACAAGCTGGTGTCTGAATTTGCTGTGTTTCAGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066091.14 |
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| CDS GCA 72 bp | CCGGGTCTGAGCTGGTTGGGGAGTGAGGGTAGGTGCTaGTGCTGCCGCCAGGAGAGTTGGGGTAGCTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: PGLSWLGSEGRC*CCRQESWGSCC Trigger: ACAGCAGCTACCCCAACTCTCCTGGCGGCAGCAGCAGCACCTACCCTCACTCCCCAACCAGCTCAGACCCGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066091.14 ENSMUST00000109885.8 |
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| CDS GCA 72 bp | GGTCTGAGCTGGTTGGGGAGTGAGGGTAGGTGCTGCTaGTGCCGCCAGGAGAGTTGGGGTAGCTGCTGTTGG | + |
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Preference number: 6 (lower is better) Translates to: GLSWLGSEGRCC*CRQESWGSCCW Trigger: CCAACAGCAGCTACCCCAACTCTCCTGGCGGCAGCAGCAGCACCTACCCTCACTCCCCAACCAGCTCAGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066091.14 ENSMUST00000109885.8 |
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| CDS CCA 72 bp | CAGCGGGCAGTGGAGGCGCCATCATGTTCGTGTCCATaGGCTGAGAGCCATCCTGGGCCATGGGGTCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: QRAVEAPSCSCP*AESHPGPWGLQ Trigger: CTGAAGACCCCATGGCCCAGGATGGCTCTCAGCCCATGGACACGAACATGATGGCGCCTCCACTGCCCGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066091.14 ENSMUST00000109885.8 |
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| CDS CCA 72 bp | TGCCTGAACATCTCCTCTGCTGATTTCAGCGGGCAGTaGAGGCGCCATCATGTTCGTGTCCATGGGCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: CLNISSADFSGQ*RRHHVRVHGLR Trigger: TCTCAGCCCATGGACACGAACATGATGGCGCCTCCACTGCCCGCTGAAATCAGCAGAGGAGATGTTCAGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066091.14 ENSMUST00000109885.8 |
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| CDS TCA 72 bp | CAAGGCAGAAGCGGTTCTTATTGTTGGACGGATCTGTaGAACCATCCACCAGCACGCTGGTGGACGAGGCGT | + |
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Preference number: 6 (lower is better) Translates to: QGRSGSYCWTDL*NHPPARWWTRR Trigger: ACGCCTCGTCCACCAGCGTGCTGGTGGATGGTTTCACAGATCCGTCCAACAATAAGAACCGCTTCTGCCTTG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066091.14 ENSMUST00000109885.8 |
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