Pregenerated sensors for SLY (Mus musculus)
Ensembl gene IDs: ENSMUSG00000101155Ensembl transcript IDs: ENSMUST00000189109.7, ENSMUST00000190292.2, ENSMUST00000191355.7
Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | GATGGGAAAGTAGAAGAGTACTTCAGATTATCCTCCATGATGGCTCTTTCAAACTCCAGGGTCTGGTTCTaGCTACATTTGGACAGTTTC | + |
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Preference number: 4 (lower is better) Translates to: DGKVEEYFRLSSMMALSNSRVWF*LHLDSF Trigger: GAAACTGTCCAAATGTAGTCAGAACCAGACCCTGGA...GTTTGAAAGAGCCATCATGGAGGATAATCTGAAGTACTCTTCTACTTTCCCATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000189109.7 ENSMUST00000190292.2 |
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| CDS-3UTR TCA 90 bp | CATTTTTCTGAAGATGGGAAAGTAGAAGAGTACTTCAGATTATCCTCCATGATGTCCAGGGTCTGGTTCTaGCTACATTTGGACAGTTTC | + |
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Preference number: 4 (lower is better) Translates to: HFSEDGKVEEYFRLSSMMSRVWF*LHLDSF Trigger: GAAACTGTCCAAATGTAGTCAGAACCAGACCCTGGA...CATCATGGAGGATAATCTGAAGTACTCTTCTACTTTCCCATCTTCAGAAAAATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000189109.7 ENSMUST00000190292.2 |
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| CDS-3UTR GCA 90 bp | GATGGGAAAGTAGAAGAGTACTTCAGATTATCCTCCATGATGGCTCTTTCAAACATGCATTTCTTTAACTaGTTCCAGGGTCTGGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: DGKVEEYFRLSSMMALSNMHFFN*FQGLVL Trigger: CAGAACCAGACCCTGGAAGCAGTTAAAGAAATGCAT...GTTTGAAAGAGCCATCATGGAGGATAATCTGAAGTACTCTTCTACTTTCCCATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000189109.7 ENSMUST00000190292.2 |
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| CDS-3UTR GCA 90 bp | TCTGAAGATGGGAAAGTAGAAGAGTACTTCAGATTATCCTCCATGATGGCTCTTATGCATTTCTTTAACTaGTTCCAGGGTCTGGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: SEDGKVEEYFRLSSMMALMHFFN*FQGLVL Trigger: CAGAACCAGACCCTGGAAGCAGTTAAAGAAATGCAT...AAGAGCCATCATGGAGGATAATCTGAAGTACTCTTCTACTTTCCCATCTTCAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000189109.7 ENSMUST00000190292.2 |
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| CDS-3UTR TCA 90 bp | GATGGGAAAGTAGAAGAGTACTTCAGATTATCCTCCATGATGGCTCTTTCAAACTCATCTGCTTCTGCTTaGGGCGATATATTCTCATTT | + |
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Preference number: 4 (lower is better) Translates to: DGKVEEYFRLSSMMALSNSSASA*GDIFSF Trigger: AAATGAGAATATATCGCCTCAAGCAGAAGCAGATGA...GTTTGAAAGAGCCATCATGGAGGATAATCTGAAGTACTCTTCTACTTTCCCATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000189109.7 ENSMUST00000190292.2 |
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| CDS-3UTR GCA 90 bp | GAAGATGGGAAAGTAGAAGAGTACTTCAGATTATCCTCCATGATGGCTCTTTCAATCTTCATCTGCTTCTaGTTGAGGCGATATATTCTC | + |
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Preference number: 4 (lower is better) Translates to: EDGKVEEYFRLSSMMALSIFICF*LRRYIL Trigger: GAGAATATATCGCCTCAAGCAGAAGCAGATGAAGAT...TGAAAGAGCCATCATGGAGGATAATCTGAAGTACTCTTCTACTTTCCCATCTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000189109.7 ENSMUST00000190292.2 |
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| CDS-3UTR TCA 90 bp | AGATGGGAAAGTAGAAGAGTACTTCAGATTATCCTCCATGATGGCTCTTTCAAATCATCTGCTTCTGCTTaGGGCGATATATTCTCATTT | + |
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Preference number: 4 (lower is better) Translates to: RWESRRVLQIILHDGSFKSSASA*GDIFSF Trigger: AAATGAGAATATATCGCCTCAAGCAGAAGCAGATGA...TTTGAAAGAGCCATCATGGAGGATAATCTGAAGTACTCTTCTACTTTCCCATCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000189109.7 ENSMUST00000190292.2 |
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| CDS-3UTR GCA 90 bp | GATGGGAAAGTAGAAGAGTACTTCAGATTATCCTCCATGATGGCTCTTTCAAACCTCATTTTTATCAAATaGTGGGCTCTTTACTTCCGA | + |
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Preference number: 4 (lower is better) Translates to: DGKVEEYFRLSSMMALSNLIFIK*WALYFR Trigger: TCGGAAGTAAAGAGCCCAGCATTTGATAAAAATGAG...GTTTGAAAGAGCCATCATGGAGGATAATCTGAAGTACTCTTCTACTTTCCCATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000189109.7 ENSMUST00000190292.2 |
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| CDS-3UTR GCA 90 bp | AGATGGGAAAGTAGAAGAGTACTTCAGATTATCCTCCATGATGGCTCTTTCAAATCCATGGACTTCTCATaGATTTCTTTAACTGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: RWESRRVLQIILHDGSFKSMDFS*ISLTAS Trigger: GGAAGCAGTTAAAGAAATGCATGAGAAGTCCATGGA...TTTGAAAGAGCCATCATGGAGGATAATCTGAAGTACTCTTCTACTTTCCCATCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000189109.7 ENSMUST00000190292.2 |
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| CDS-3UTR GCA 90 bp | TCTGAAGATGGGAAAGTAGAAGAGTACTTCAGATTATCCTCCATGATGGCTCTTATTTATCCAACATACTaGCTACTTCATGTCCCATGT | + |
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Preference number: 4 (lower is better) Translates to: SEDGKVEEYFRLSSMMALIYPTY*LLHVPC Trigger: ACATGGGACATGAAGTAGGCAGTATGTTGGATAAAT...AAGAGCCATCATGGAGGATAATCTGAAGTACTCTTCTACTTTCCCATCTTCAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190292.2 |
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| CDS-3UTR CCA 90 bp | GATGGGAAAGTAGAAGAGTACTTCAGATTATCCTCCATGATGGCTCTTTCAAACGGTTCTGACTACATTTaGACAGTTTCAATGCTTGTT | + |
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Preference number: 4 (lower is better) Translates to: DGKVEEYFRLSSMMALSNGSDYI*TVSMLV Trigger: AACAAGCATTGAAACTGTCCAAATGTAGTCAGAACC...GTTTGAAAGAGCCATCATGGAGGATAATCTGAAGTACTCTTCTACTTTCCCATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000189109.7 ENSMUST00000190292.2 |
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| CDS-3UTR GCA 90 bp | AGTAGAAGAGTACTTCAGATTATCCTCCATGATGGCTCTTTCAAACATAGACATATCTTCATCTGCTTCTaGTTGAGGCGATATATTCTC | + |
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Preference number: 4 (lower is better) Translates to: SRRVLQIILHDGSFKHRHIFICF*LRRYIL Trigger: GAGAATATATCGCCTCAAGCAGAAGCAGATGAAGAT...ATGTCTATGTTTGAAAGAGCCATCATGGAGGATAATCTGAAGTACTCTTCTACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000189109.7 ENSMUST00000190292.2 |
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| CDS-3UTR GCA 90 bp | AGTAGAAGAGTACTTCAGATTATCCTCCATGATGGCTCTTTCAAACATAGACATTCCATGGACTTCTCATaGATTTCTTTAACTGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: SRRVLQIILHDGSFKHRHSMDFS*ISLTAS Trigger: GGAAGCAGTTAAAGAAATGCATGAGAAGTCCATGGA...ATGTCTATGTTTGAAAGAGCCATCATGGAGGATAATCTGAAGTACTCTTCTACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000189109.7 ENSMUST00000190292.2 |
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| CDS-3UTR CCA 90 bp | GAAGATGGGAAAGTAGAAGAGTACTTCAGATTATCCTCCATGATGGCTCTTTCAATTTTTATCAAATGCTaGGCTCTTTACTTCCGAAAG | + |
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Preference number: 4 (lower is better) Translates to: EDGKVEEYFRLSSMMALSIFIKC*ALYFRK Trigger: CTTTCGGAAGTAAAGAGCCCAGCATTTGATAAAAAT...TGAAAGAGCCATCATGGAGGATAATCTGAAGTACTCTTCTACTTTCCCATCTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000189109.7 ENSMUST00000190292.2 |
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| CDS-3UTR CCA 90 bp | CATTTTTCTGAAGATGGGAAAGTAGAAGAGTACTTCAGATTATCCTCCATGATGGGTTCTGACTACATTTaGACAGTTTCAATGCTTGTT | + |
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Preference number: 4 (lower is better) Translates to: HFSEDGKVEEYFRLSSMMGSDYI*TVSMLV Trigger: AACAAGCATTGAAACTGTCCAAATGTAGTCAGAACC...CATCATGGAGGATAATCTGAAGTACTCTTCTACTTTCCCATCTTCAGAAAAATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000189109.7 ENSMUST00000190292.2 |
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| CDS-3UTR CCA 90 bp | AGTAGAAGAGTACTTCAGATTATCCTCCATGATGGCTCTTTCAAACATAGACATATTTTTATCAAATGCTaGGCTCTTTACTTCCGAAAG | + |
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Preference number: 4 (lower is better) Translates to: SRRVLQIILHDGSFKHRHIFIKC*ALYFRK Trigger: CTTTCGGAAGTAAAGAGCCCAGCATTTGATAAAAAT...ATGTCTATGTTTGAAAGAGCCATCATGGAGGATAATCTGAAGTACTCTTCTACT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000189109.7 ENSMUST00000190292.2 |
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| CDS GCA 90 bp | CAAGTTCATCAAAACCTCCATGGACTTCTCATGCATTTCTTTAACTaGTTCCAGGGTCTGGTTCTGACTACATTTGGACAGTTTCAATGC | + |
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Preference number: 5 (lower is better) Translates to: QVHQNLHGLLMHFFN*FQGLVLTTFGQFQC Trigger: GCATTGAAACTGTCCAAATGTAGTCAGAACCAGACCCTGGAAGCAGTTAAAGAAATGCATGAGAAGTCCATGGAGGTTTTGATGAACTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000189109.7 ENSMUST00000190292.2 |
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| CDS GCA 90 bp | TGTGAAGCGTCTTATAAATGTCATCTCCAGATTTATCCAACATACTaGCTACTTCATGTCCCATGTCTTCATCTCCTTTTACTTGAGGCG | + |
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Preference number: 5 (lower is better) Translates to: CEASYKCHLQIYPTY*LLHVPCLHLLLLEA Trigger: CGCCTCAAGTAAAAGGAGATGAAGACATGGGACATGAAGTAGGCAGTATGTTGGATAAATCTGGAGATGACATTTATAAGACGCTTCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190292.2 |
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| CDS-3UTR CAA 90 bp | GAAGATGGGAAAGTAGAAGAGTACTTCAGATTATCCTCCATGATGGCTCTTTCATCACAAAATTTGTTGTaGATGTTCTTCCTCTCTCGT | + |
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Preference number: 5 (lower is better) Translates to: EDGKVEEYFRLSSMMALSSQNLL*MFFLSR Trigger: ACGAGAGAGGAAGAACATCAACAACAAATTTTGTGA...TGAAAGAGCCATCATGGAGGATAATCTGAAGTACTCTTCTACTTTCCCATCTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000189109.7 ENSMUST00000190292.2 |
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| CDS-3UTR CAA 90 bp | GATGGGAAAGTAGAAGAGTACTTCAGATTATCCTCCATGATGGCTCTTTCAAACTACTGCTCACAAAATTaGTTGTTGATGTTCTTCCTC | + |
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Preference number: 5 (lower is better) Translates to: DGKVEEYFRLSSMMALSNYCSQN*LLMFFL Trigger: GAGGAAGAACATCAACAACAAATTTTGTGAGCAGTA...GTTTGAAAGAGCCATCATGGAGGATAATCTGAAGTACTCTTCTACTTTCCCATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000189109.7 ENSMUST00000190292.2 |
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| CDS-3UTR CAA 90 bp | GATGGGAAAGTAGAAGAGTACTTCAGATTATCCTCCATGATGGCTCTTTCAAACGGACAGTTTCAATGCTaGTTGTTCTTTTTGACAACT | + |
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Preference number: 5 (lower is better) Translates to: DGKVEEYFRLSSMMALSNGQFQC*LFFLTT Trigger: AGTTGTCAAAAAGAACAACAAGCATTGAAACTGTCC...GTTTGAAAGAGCCATCATGGAGGATAATCTGAAGTACTCTTCTACTTTCCCATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000189109.7 ENSMUST00000190292.2 |
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| CDS-3UTR CAA 90 bp | TCTGAAGATGGGAAAGTAGAAGAGTACTTCAGATTATCCTCCATGATGGCTCTTGGACAGTTTCAATGCTaGTTGTTCTTTTTGACAACT | + |
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Preference number: 5 (lower is better) Translates to: SEDGKVEEYFRLSSMMALGQFQC*LFFLTT Trigger: AGTTGTCAAAAAGAACAACAAGCATTGAAACTGTCC...AAGAGCCATCATGGAGGATAATCTGAAGTACTCTTCTACTTTCCCATCTTCAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000189109.7 ENSMUST00000190292.2 |
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| CDS-3UTR CAA 90 bp | CATTTTTCTGAAGATGGGAAAGTAGAAGAGTACTTCAGATTATCCTCCATGATGTCACAAAATTTGTTGTaGATGTTCTTCCTCTCTCGT | + |
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Preference number: 5 (lower is better) Translates to: HFSEDGKVEEYFRLSSMMSQNLL*MFFLSR Trigger: ACGAGAGAGGAAGAACATCAACAACAAATTTTGTGA...CATCATGGAGGATAATCTGAAGTACTCTTCTACTTTCCCATCTTCAGAAAAATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000189109.7 ENSMUST00000190292.2 |
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| CDS TCA 90 bp | AACATACTGCCTACTTCATGTCCCATGTCTTCATCTCCTTTTACTTaGGGCGATATATTTTCATCTTTACCAATTGCTGGATTATTTACT | + |
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Preference number: 5 (lower is better) Translates to: NILPTSCPMSSSPFT*GDIFSSLPIAGLFT Trigger: AGTAAATAATCCAGCAATTGGTAAAGATGAAAATATATCGCCTCAAGTAAAAGGAGATGAAGACATGGGACATGAAGTAGGCAGTATGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190292.2 |
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| CDS GCA 72 bp | CAAAACCTCCATGGACTTCTCATGCATTTCTTTAACTaGTTCCAGGGTCTGGTTCTGACTACATTTGGACAG | + |
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Preference number: 6 (lower is better) Translates to: QNLHGLLMHFFN*FQGLVLTTFGQ Trigger: CTGTCCAAATGTAGTCAGAACCAGACCCTGGAAGCAGTTAAAGAAATGCATGAGAAGTCCATGGAGGTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000189109.7 ENSMUST00000190292.2 |
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| CDS TCA 72 bp | TCATGCATTTCTTTAACTGCTTCCAGGGTCTGGTTCTaGCTACATTTGGACAGTTTCAATGCTTGTTGTTCT | + |
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Preference number: 6 (lower is better) Translates to: SCISLTASRVWF*LHLDSFNACCS Trigger: AGAACAACAAGCATTGAAACTGTCCAAATGTAGTCAGAACCAGACCCTGGAAGCAGTTAAAGAAATGCATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000189109.7 ENSMUST00000190292.2 |
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| CDS TCA 72 bp | TCTACTTCATCTCCCATATCTTCATCTGCTTCTGCTTaGGGCGATATATTCTCATTTTTATCAAATGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: STSSPISSSASA*GDIFSFLSNAG Trigger: CCCAGCATTTGATAAAAATGAGAATATATCGCCTCAAGCAGAAGCAGATGAAGATATGGGAGATGAAGTAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000189109.7 ENSMUST00000190292.2 |
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| CDS CAA 72 bp | GTCTACTTCATCTCCCATATCTTCATCTGCTTCTGCTaGAGGCGATATATTCTCATTTTTATCAAATGCTGG | + |
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Preference number: 6 (lower is better) Translates to: VYFISHIFICFC*RRYILIFIKCW Trigger: CCAGCATTTGATAAAAATGAGAATATATCGCCTCAAGCAGAAGCAGATGAAGATATGGGAGATGAAGTAGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000189109.7 ENSMUST00000190292.2 |
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| CDS CAA 72 bp | TTGTTGTTGATGTTCTTCCTCTCTCGTTCGTTCGTTTaGCAAAATCTTTCTAATTTCTGGTTGCTGCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: LLLMFFLSRSFV*QNLSNFWLLPL Trigger: CAAAGGCAGCAACCAGAAATTAGAAAGATTTTGCAAAACGAACGAACGAGAGAGGAAGAACATCAACAACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000189109.7 ENSMUST00000190292.2 ENSMUST00000191355.7 |
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| CDS GCA 72 bp | ACTGTCTACTTCATCTCCCATATCTTCATCTGCTTCTaGTTGAGGCGATATATTCTCATTTTTATCAAATGC | + |
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Preference number: 6 (lower is better) Translates to: TVYFISHIFICF*LRRYILIFIKC Trigger: GCATTTGATAAAAATGAGAATATATCGCCTCAAGCAGAAGCAGATGAAGATATGGGAGATGAAGTAGACAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000189109.7 ENSMUST00000190292.2 |
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| CDS GCA 72 bp | CAACATACTGTCTACTTCATCTCCCATATCTTCATCTaGTTCTGCTTGAGGCGATATATTCTCATTTTTATC | + |
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Preference number: 6 (lower is better) Translates to: QHTVYFISHIFI*FCLRRYILIFI Trigger: GATAAAAATGAGAATATATCGCCTCAAGCAGAAGCAGATGAAGATATGGGAGATGAAGTAGACAGTATGTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000189109.7 ENSMUST00000190292.2 |
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| CDS CAA 90 bp | CAACATACTGCCTACTTCATGTCCCATGTCTTCATCTCCTTTTACTaGAGGCGATATATTTTCATCTTTACCAATTGCTGGATTATTTAC | + |
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Preference number: 6 (lower is better) Translates to: QHTAYFMSHVFISFY*RRYIFIFTNCWIIY Trigger: GTAAATAATCCAGCAATTGGTAAAGATGAAAATATATCGCCTCAAGTAAAAGGAGATGAAGACATGGGACATGAAGTAGGCAGTATGTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190292.2 |
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| CDS CAA 90 bp | TCACAAAATTTGTTGTTGATGTTCTTCCTCTCTCGTTCGTTCGTTTaGCAAAATCTTTCTAATTTCTGGTTGCTGCCTTTGAAAGATTCT | + |
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Preference number: 6 (lower is better) Translates to: SQNLLLMFFLSRSFV*QNLSNFWLLPLKDS Trigger: AGAATCTTTCAAAGGCAGCAACCAGAAATTAGAAAGATTTTGCAAAACGAACGAACGAGAGAGGAAGAACATCAACAACAAATTTTGTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000189109.7 ENSMUST00000190292.2 ENSMUST00000191355.7 |
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| CDS GCA 72 bp | TCTTATAAATGTCATCTCCAGATTTATCCAACATACTaGCTACTTCATGTCCCATGTCTTCATCTCCTTTTA | + |
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Preference number: 6 (lower is better) Translates to: SYKCHLQIYPTY*LLHVPCLHLLL Trigger: TAAAAGGAGATGAAGACATGGGACATGAAGTAGGCAGTATGTTGGATAAATCTGGAGATGACATTTATAAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190292.2 |
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