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Pregenerated sensors for SLXL1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000067909

Ensembl transcript IDs: ENSMUST00000088740.5

Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 72 bp TTGCATGCTTCATTATTCTCAAGATGGGAATGTAGATaGGTACTTCAGAGTATGCTTCATGATGTCTCTTTT +
Preference number: 3 (lower is better)
Translates to: LHASLFSRWECR*VLQSMLHDVSF
Trigger: AAAAGAGACATCATGAAGCATACTCTGAAGTACTCATCTACATTCCCATCTTGAGAATAATGAAGCATGCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000088740.5
CDS-3UTR TCA 90 bp GATGGGAATGTAGATGAGTACTTCAGAGTATGCTTCATGATGTCTCTTTTAAACCACACGACTTGTTGTTaGTCATCTCCCGTGTATCTC +
Preference number: 4 (lower is better)
Translates to: DGNVDEYFRVCFMMSLLNHTTCC*SSPVYL
Trigger: GAGATACACGGGAGATGATCAACAACAAGTCGTGTG...GTTTAAAAGAGACATCATGAAGCATACTCTGAAGTACTCATCTACATTCCCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000088740.5
CDS-3UTR TCA 90 bp GATGGGAATGTAGATGAGTACTTCAGAGTATGCTTCATGATGTCTCTTTTAAACACGCTGCCATTCCTCTaGGAAACTTACGTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: DGNVDEYFRVCFMMSLLNTLPFL*ETYVFF
Trigger: GAAGAAAACGTAAGTTTCTCAGAGGAATGGCAGCGT...GTTTAAAAGAGACATCATGAAGCATACTCTGAAGTACTCATCTACATTCCCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000088740.5
CDS-3UTR TCA 90 bp GATGGGAATGTAGATGAGTACTTCAGAGTATGCTTCATGATGTCTCTTTTAAACCATAAGATCCAATTTTaGAGCATTCCCATCTTGCTG +
Preference number: 4 (lower is better)
Translates to: DGNVDEYFRVCFMMSLLNHKIQF*SIPILL
Trigger: CAGCAAGATGGGAATGCTTCAAAATTGGATCTTATG...GTTTAAAAGAGACATCATGAAGCATACTCTGAAGTACTCATCTACATTCCCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000088740.5
CDS-3UTR TCA 90 bp CAAGATGGGAATGTAGATGAGTACTTCAGAGTATGCTTCATGATGTCTCTTTTAGTTCATCAAACCCACTaGTTTTTCTTGCTGTTCATT +
Preference number: 4 (lower is better)
Translates to: QDGNVDEYFRVCFMMSLLVHQTH*FFLLFI
Trigger: AATGAACAGCAAGAAAAATCAGTGGGTTTGATGAAC...TAAAAGAGACATCATGAAGCATACTCTGAAGTACTCATCTACATTCCCATCTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000088740.5
CDS-3UTR CCA 90 bp GATGGGAATGTAGATGAGTACTTCAGAGTATGCTTCATGATGTCTCTTTTAAACATCATCATGAGTTACTaGATTCTGTTCTTCCATAAG +
Preference number: 4 (lower is better)
Translates to: DGNVDEYFRVCFMMSLLNIIMSY*ILFFHK
Trigger: CTTATGGAAGAACAGAATCCAGTAACTCATGATGAT...GTTTAAAAGAGACATCATGAAGCATACTCTGAAGTACTCATCTACATTCCCATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000088740.5
CDS-3UTR CAA 90 bp GATGGGAATGTAGATGAGTACTTCAGAGTATGCTTCATGATGTCTCTTTTAAACGTGTCTCTACAGAACTaGCAAAACGCTGCCATTCCT +
Preference number: 5 (lower is better)
Translates to: DGNVDEYFRVCFMMSLLNVSLQN*QNAAIP
Trigger: AGGAATGGCAGCGTTTTGCAAGTTCTGTAGAGACAC...GTTTAAAAGAGACATCATGAAGCATACTCTGAAGTACTCATCTACATTCCCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000088740.5
CDS GCA 90 bp GGATTCTGTTCTTCCATAAGATCCAATTTTGAAGCATTCCCATCTTaGTGTTCACCACTTAACAAATTCCTGTTTTCTATTGGTGTCTCT +
Preference number: 5 (lower is better)
Translates to: GFCSSIRSNFEAFPS*CSPLNKFLFSIGVS
Trigger: AGAGACACCAATAGAAAACAGGAATTTGTTAAGTGGTGAACAGCAAGATGGGAATGCTTCAAAATTGGATCTTATGGAAGAACAGAATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000088740.5
CDS TCA 90 bp AAAAAGCATATCGGAGTTGTTGGTCTCCAAGTTCATCAAACCCACTaGTTTTTCTTGCTGTTCATTGAAATTCTGGACATCCATATCAAA +
Preference number: 5 (lower is better)
Translates to: KKHIGVVGLQVHQTH*FFLLFIEILDIHIK
Trigger: TTTGATATGGATGTCCAGAATTTCAATGAACAGCAAGAAAAATCAGTGGGTTTGATGAACTTGGAGACCAACAACTCCGATATGCTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000088740.5
CDS CAA 90 bp CATTCCCATCTTGCTGTTCACCACTTAACAAATTCCTGTTTTCTATaGGTGTCTCTACAGAACTTGCAAAACGCTGCCATTCCTCTGAGA +
Preference number: 6 (lower is better)
Translates to: HSHLAVHHLTNSCFL*VSLQNLQNAAIPLR
Trigger: TCTCAGAGGAATGGCAGCGTTTTGCAAGTTCTGTAGAGACACCAATAGAAAACAGGAATTTGTTAAGTGGTGAACAGCAAGATGGGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000088740.5
CDS TCA 72 bp ATCGGAGTTGTTGGTCTCCAAGTTCATCAAACCCACTaGTTTTTCTTGCTGTTCATTGAAATTCTGGACATC +
Preference number: 6 (lower is better)
Translates to: IGVVGLQVHQTH*FFLLFIEILDI
Trigger: GATGTCCAGAATTTCAATGAACAGCAAGAAAAATCAGTGGGTTTGATGAACTTGGAGACCAACAACTCCGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000088740.5
CDS CAA 72 bp ACAAATTCCTGTTTTCTATTGGTGTCTCTACAGAACTaGCAAAACGCTGCCATTCCTCTGAGAAACTTACGT +
Preference number: 6 (lower is better)
Translates to: TNSCFLLVSLQN*QNAAIPLRNLR
Trigger: ACGTAAGTTTCTCAGAGGAATGGCAGCGTTTTGCAAGTTCTGTAGAGACACCAATAGAAAACAGGAATTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000088740.5
CDS CAA 72 bp CTTGCTGTTCACCACTTAACAAATTCCTGTTTTCTATaGGTGTCTCTACAGAACTTGCAAAACGCTGCCATT +
Preference number: 6 (lower is better)
Translates to: LAVHHLTNSCFL*VSLQNLQNAAI
Trigger: AATGGCAGCGTTTTGCAAGTTCTGTAGAGACACCAATAGAAAACAGGAATTTGTTAAGTGGTGAACAGCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000088740.5
CDS GCA 72 bp TTGGTCTCCAAGTTCATCAAACCCACTGATTTTTCTTaGTGTTCATTGAAATTCTGGACATCCATATCAAAC +
Preference number: 6 (lower is better)
Translates to: LVSKFIKPTDFS*CSLKFWTSISN
Trigger: GTTTGATATGGATGTCCAGAATTTCAATGAACAGCAAGAAAAATCAGTGGGTTTGATGAACTTGGAGACCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000088740.5
CDS CCA 72 bp ATTCACCATCTACATCAAAAAGCATATCGGAGTTGTTaGTCTCCAAGTTCATCAAACCCACTGATTTTTCTT +
Preference number: 6 (lower is better)
Translates to: IHHLHQKAYRSC*SPSSSNPLIFL
Trigger: AAGAAAAATCAGTGGGTTTGATGAACTTGGAGACCAACAACTCCGATATGCTTTTTGATGTAGATGGTGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000088740.5
CDS CAA 72 bp AATTCACCATCTACATCAAAAAGCATATCGGAGTTGTaGGTCTCCAAGTTCATCAAACCCACTGATTTTTCT +
Preference number: 6 (lower is better)
Translates to: NSPSTSKSISEL*VSKFIKPTDFS
Trigger: AGAAAAATCAGTGGGTTTGATGAACTTGGAGACCAACAACTCCGATATGCTTTTTGATGTAGATGGTGAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000088740.5
CDS TCA 72 bp TGTTCATTGAAATTCTGGACATCCATATCAAACTTCTaGAATGTAGTTTTATACTGCTCACACGACTTGTTG +
Preference number: 6 (lower is better)
Translates to: CSLKFWTSISNF*NVVLYCSHDLL
Trigger: CAACAAGTCGTGTGAGCAGTATAAAACTACATTTCAGAAGTTTGATATGGATGTCCAGAATTTCAATGAACA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000088740.5
CDS TCA 72 bp AGTTCATCAAACCCACTGATTTTTCTTGCTGTTCATTaGAATTCTGGACATCCATATCAAACTTCTGAAATG +
Preference number: 6 (lower is better)
Translates to: SSSNPLIFLAVH*NSGHPYQTSEM
Trigger: CATTTCAGAAGTTTGATATGGATGTCCAGAATTTCAATGAACAGCAAGAAAAATCAGTGGGTTTGATGAACT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000088740.5
CDS GCA 72 bp TCTTCCATAAGATCCAATTTTGAAGCATTCCCATCTTaGTGTTCACCACTTAACAAATTCCTGTTTTCTATT +
Preference number: 6 (lower is better)
Translates to: SSIRSNFEAFPS*CSPLNKFLFSI
Trigger: AATAGAAAACAGGAATTTGTTAAGTGGTGAACAGCAAGATGGGAATGCTTCAAAATTGGATCTTATGGAAGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000088740.5