Pregenerated sensors for SLX1B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059772Ensembl transcript IDs: ENSMUST00000142337.7, ENSMUST00000144897.2
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGCTGGGGTGGAGGTGGTCCAAAGGCAATGGGCATGTGTGCCGGTaGCGCTGGACAGAGTTCATGGCGGAAGTCAGGTCGCAGCCAACG | + |
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Preference number: 1 (lower is better) Translates to: GLGWRWSKGNGHVCR*RWTEFMAEVRSQPT Trigger: CGTTGGCTGCGACCTGACTTCCGCCATGAACTCTGTCCAGCGCCACCGGCACACATGCCCATTGCCTTTGGACCACCTCCACCCCAGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142337.7 |
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| 3UTR CCA 90 bp | TCGCTGTCAGCCTCGCTTACAGCTGGTCGTTTTGGGACTAAGGGCTaGGGTGGAGGTGGTCCAAAGGCAATGGGCATGTGTGCCGGTGGC | + |
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Preference number: 1 (lower is better) Translates to: SLSASLTAGRFGTKG*GGGGPKAMGMCAGG Trigger: GCCACCGGCACACATGCCCATTGCCTTTGGACCACCTCCACCCCAGCCCTTAGTCCCAAAACGACCAGCTGTAAGCGAGGCTGACAGCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142337.7 |
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| 3UTR TCA 90 bp | CAAGGGTCTATCCAGGATTGGCTAGCACTGCCCTGGCTCTCACCTTaGCCTTCATCCAGCGAACTCTGGGGGACCAGAGACACAGGCCAG | + |
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Preference number: 1 (lower is better) Translates to: QGSIQDWLALPWLSP*PSSSELWGTRDTGQ Trigger: CTGGCCTGTGTCTCTGGTCCCCCAGAGTTCGCTGGATGAAGGTCAAGGTGAGAGCCAGGGCAGTGCTAGCCAATCCTGGATAGACCCTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
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| 3UTR CCA 90 bp | GCTTCAAGAGAAAGACCAGGAGGCTTTGGGGGAAGAGCACTCTGCTaGAGCTCACAGAGCCAGCTAGTGGTAGCTGCCTGGAAGGCAGGT | + |
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Preference number: 1 (lower is better) Translates to: ASRERPGGFGGRALC*SSQSQLVVAAWKAG Trigger: ACCTGCCTTCCAGGCAGCTACCACTAGCTGGCTCTGTGAGCTCCAGCAGAGTGCTCTTCCCCCAAAGCCTCCTGGTCTTTCTCTTGAAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
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| 3UTR TCA 90 bp | CATCCAGCGAACTCTGGGGGACCAGAGACACAGGCCAGTGAGTTTTaGGGAACCTCAGGGCTGGAGTGCTTTCCAGAGCTTCAAGACCCT | + |
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Preference number: 1 (lower is better) Translates to: HPANSGGPETQASEF*GTSGLECFPELQDP Trigger: AGGGTCTTGAAGCTCTGGAAAGCACTCCAGCCCTGAGGTTCCTCAAAACTCACTGGCCTGTGTCTCTGGTCCCCCAGAGTTCGCTGGATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
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| 3UTR GCA 90 bp | TTGGCTTCAAGAGAAAGACCAGGAGGCTTTGGGGGAAGAGCACTCTaGTGGAGCTCACAGAGCCAGCTAGTGGTAGCTGCCTGGAAGGCA | + |
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Preference number: 1 (lower is better) Translates to: LASRERPGGFGGRAL*WSSQSQLVVAAWKA Trigger: TGCCTTCCAGGCAGCTACCACTAGCTGGCTCTGTGAGCTCCAGCAGAGTGCTCTTCCCCCAAAGCCTCCTGGTCTTTCTCTTGAAGCCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
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| 3UTR TCA 90 bp | CTTGCCTGTGGGCACATCTGTGCGGGCATTTTCTTTATTGCTGATTaGTGTGAGAAGGCCCAGCCCACTGTGGACAGTGCCACCCCTAGG | + |
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Preference number: 1 (lower is better) Translates to: LACGHICAGIFFIAD*CEKAQPTVDSATPR Trigger: CCTAGGGGTGGCACTGTCCACAGTGGGCTGGGCCTTCTCACATCAATCAGCAATAAAGAAAATGCCCGCACAGATGTGCCCACAGGCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
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| 3UTR CCA 90 bp | AGGGCTTGGCTGTGTCTGCCAAGGTGGGAACTACAGACCTGGTTATaGAACTCTCCTGGTCATCAGGAAAGGCTTGCAAGCTGTGCAGTG | + |
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Preference number: 1 (lower is better) Translates to: RAWLCLPRWELQTWL*NSPGHQERLASCAV Trigger: CACTGCACAGCTTGCAAGCCTTTCCTGATGACCAGGAGAGTTCCATAACCAGGTCTGTAGTTCCCACCTTGGCAGACACAGCCAAGCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
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| 3UTR CCA 90 bp | CAGCCACCTCCATTAGAAGCACACCACTACCATTTGAGGTGCTCTTaGCTTCAAGAGAAAGACCAGGAGGCTTTGGGGGAAGAGCACTCT | + |
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Preference number: 1 (lower is better) Translates to: QPPPLEAHHYHLRCS*LQEKDQEALGEEHS Trigger: AGAGTGCTCTTCCCCCAAAGCCTCCTGGTCTTTCTCTTGAAGCCAAGAGCACCTCAAATGGTAGTGGTGTGCTTCTAATGGAGGTGGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
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| 3UTR GCA 90 bp | ACTACAGACCTGGTTATGGAACTCTCCTGGTCATCAGGAAAGGCTTaGAAGCTGTGCAGTGCAGCAATCCCCTCTGCAGTCTTTGACACT | + |
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Preference number: 1 (lower is better) Translates to: TTDLVMELSWSSGKA*KLCSAAIPSAVFDT Trigger: AGTGTCAAAGACTGCAGAGGGGATTGCTGCACTGCACAGCTTGCAAGCCTTTCCTGATGACCAGGAGAGTTCCATAACCAGGTCTGTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
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| 3UTR TCA 90 bp | TGCCTGGTGCTTATGTGTGAACACAAGGACCTTTGTGCTCCCAACTaGGGCTCCAAGTCACAGGTGCTACCCTCTGAGCCTCTAATTATT | + |
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Preference number: 1 (lower is better) Translates to: CLVLMCEHKDLCAPN*GSKSQVLPSEPLII Trigger: AATAATTAGAGGCTCAGAGGGTAGCACCTGTGACTTGGAGCCTCAGTTGGGAGCACAAAGGTCCTTGTGTTCACACATAAGCACCAGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
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| 3UTR GCA 90 bp | GAAGGTACCCTTATCCCAGCCTTTGTGTGGTGCTCAAGTAAAAGCTaGCAGTTACTGAAGAGAGAAGCAGGAAAGGTACAGGGGGACACT | + |
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Preference number: 1 (lower is better) Translates to: EGTLIPAFVWCSSKS*QLLKREAGKVQGDT Trigger: AGTGTCCCCCTGTACCTTTCCTGCTTCTCTCTTCAGTAACTGGCAGCTTTTACTTGAGCACCACACAAAGGCTGGGATAAGGGTACCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000142337.7 ENSMUST00000144897.2 |
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| 3UTR TCA 90 bp | TCGAAAAGTTTGGTAGCTTTCCAAGGGATGCCTGGTGCTTATGTGTaGACACAAGGACCTTTGTGCTCCCAACTGAGGCTCCAAGTCACA | + |
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Preference number: 1 (lower is better) Translates to: SKSLVAFQGMPGAYV*TQGPLCSQLRLQVT Trigger: TGTGACTTGGAGCCTCAGTTGGGAGCACAAAGGTCCTTGTGTTCACACATAAGCACCAGGCATCCCTTGGAAAGCTACCAAACTTTTCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
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| 3UTR CCA 90 bp | TTGAGGAACCTCAGGGCTGGAGTGCTTTCCAGAGCTTCAAGACCCTaGTCATTTTCCTACTATTTCTTCACATACATGAGGGGGTCACCA | + |
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Preference number: 1 (lower is better) Translates to: LRNLRAGVLSRASRP*SFSYYFFTYMRGSP Trigger: TGGTGACCCCCTCATGTATGTGAAGAAATAGTAGGAAAATGACCAGGGTCTTGAAGCTCTGGAAAGCACTCCAGCCCTGAGGTTCCTCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
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| 3UTR TCA 90 bp | TTATCCCAGCCTTTGTGTGGTGCTCAAGTAAAAGCTGCCAGTTACTaGAGAGAGAAGCAGGAAAGGTACAGGGGGACACTTAGGATCAAG | + |
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Preference number: 1 (lower is better) Translates to: LSQPLCGAQVKAASY*REKQERYRGTLRIK Trigger: CTTGATCCTAAGTGTCCCCCTGTACCTTTCCTGCTTCTCTCTTCAGTAACTGGCAGCTTTTACTTGAGCACCACACAAAGGCTGGGATAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142337.7 |
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| 3UTR CCA 90 bp | AGCTCTGAGAAAACATCAGAAGGTACCCTTATCCCAGCCTTTGTGTaGTGCTCAAGTAAAAGCTGCCAGTTACTGAAGAGAGAAGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: SSEKTSEGTLIPAFV*CSSKSCQLLKREAG Trigger: TCCTGCTTCTCTCTTCAGTAACTGGCAGCTTTTACTTGAGCACCACACAAAGGCTGGGATAAGGGTACCTTCTGATGTTTTCTCAGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000142337.7 ENSMUST00000144897.2 |
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| 3UTR TCA 90 bp | CCTTTGTGCTCCCAACTGAGGCTCCAAGTCACAGGTGCTACCCTCTaGGCCTCTAATTATTATCTTGTTTGGTTTCAGTTGTCAACTTCA | + |
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Preference number: 1 (lower is better) Translates to: PLCSQLRLQVTGATL*ASNYYLVWFQLSTS Trigger: TGAAGTTGACAACTGAAACCAAACAAGATAATAATTAGAGGCTCAGAGGGTAGCACCTGTGACTTGGAGCCTCAGTTGGGAGCACAAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
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| 3UTR GCA 90 bp | TCTGAGAAAACATCAGAAGGTACCCTTATCCCAGCCTTTGTGTGGTaGTCAAGTAAAAGCTGCCAGTTACTGAAGAGAGAAGCAGGAAAG | + |
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Preference number: 1 (lower is better) Translates to: SEKTSEGTLIPAFVW*SSKSCQLLKREAGK Trigger: CTTTCCTGCTTCTCTCTTCAGTAACTGGCAGCTTTTACTTGAGCACCACACAAAGGCTGGGATAAGGGTACCTTCTGATGTTTTCTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000142337.7 ENSMUST00000144897.2 |
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| 3UTR-3UTR GCA 90 bp | ACTGTGGACAGTGCCACCCCTAGGCAGGGGGTTCTGGGTCATATAAGTGTTGATCAAAGGCAGCCTCGCTaGGCAGGCGCGGCCCCACGT | + |
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Preference number: 2 (lower is better) Translates to: TVDSATPRQGVLGHISVDQRQPR*AGAAPR Trigger: ACGTGGGGCCGCGCCTGCGCAGCGAGGCTGCCTTTG...ATCAACACTTATATGACCCAGAACCCCCTGCCTAGGGGTGGCACTGTCCACAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000142337.7 |
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| 3UTR-3UTR CCA 90 bp | CAGGCAGATGGCCTCTTACTCCATGAGACAGCAGAGACCTCAGCAGCACAGGACCTGGGGCTGAGGGCTTaGCTGTGTCTGCCAAGGTGG | + |
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Preference number: 2 (lower is better) Translates to: QADGLLLHETAETSAAQDLGLRA*LCLPRW Trigger: CCACCTTGGCAGACACAGCCAAGCCCTCAGCCCCAG...GTCCTGTGCTGCTGAGGTCTCTGCTGTCTCATGGAGTAAGAGGCCATCTGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCCCACTGTGGACAGTGCCACCCCTAGGCAGGGGGTTCTGGGTCATATAAGTGTGGTCCAAAGGCAATaGGCATGTGTGCCGGTGGCG | + |
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Preference number: 2 (lower is better) Translates to: QPTVDSATPRQGVLGHISVVQRQ*ACVPVA Trigger: CGCCACCGGCACACATGCCCATTGCCTTTGGACCAC...ACTTATATGACCCAGAACCCCCTGCCTAGGGGTGGCACTGTCCACAGTGGGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142337.7 |
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| 3UTR CAA 90 bp | CCAAGGGTCTATCCAGGATTGGCTAGCACTGCCCTGGCTCTCACCTaGACCTTCATCCAGCGAACTCTGGGGGACCAGAGACACAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: PRVYPGLASTALALT*TFIQRTLGDQRHRP Trigger: TGGCCTGTGTCTCTGGTCCCCCAGAGTTCGCTGGATGAAGGTCAAGGTGAGAGCCAGGGCAGTGCTAGCCAATCCTGGATAGACCCTTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGACCTCAGCAGCACAGGACCAAGGGTCTATCCAGGATTGGCTAGCACTGCCGGGGGAAGAGCACTCTaGTGGAGCTCACAGAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: RDLSSTGPRVYPGLASTAGGRAL*WSSQSQ Trigger: CTGGCTCTGTGAGCTCCAGCAGAGTGCTCTTCCCCC...GGCAGTGCTAGCCAATCCTGGATAGACCCTTGGTCCTGTGCTGCTGAGGTCTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
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| 3UTR CAA 90 bp | TGGTACCTGGAGAGCAGGGAGTGGGAAGTGACTGGGGCTGAGGGCTaGGCTGTGTCTGCCAAGGTGGGAACTACAGACCTGGTTATGGAA | + |
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Preference number: 2 (lower is better) Translates to: WYLESREWEVTGAEG*AVSAKVGTTDLVME Trigger: TTCCATAACCAGGTCTGTAGTTCCCACCTTGGCAGACACAGCCAAGCCCTCAGCCCCAGTCACTTCCCACTCCCTGCTCTCCAGGTACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
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| 3UTR CAA 90 bp | GACAGCAGAGACCTCAGCAGCACAGGACCAAGGGTCTATCCAGGATaGGCTAGCACTGCCCTGGCTCTCACCTTGACCTTCATCCAGCGA | + |
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Preference number: 2 (lower is better) Translates to: DSRDLSSTGPRVYPG*ASTALALTLTFIQR Trigger: TCGCTGGATGAAGGTCAAGGTGAGAGCCAGGGCAGTGCTAGCCAATCCTGGATAGACCCTTGGTCCTGTGCTGCTGAGGTCTCTGCTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGCAGATGGCCTCTTACTCCATGAGACAGCAGAGACCTCAGCAGCACAGGACTCTAGGTTCCTGCTTTaGGTTCCCACCCAACCTTCC | + |
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Preference number: 2 (lower is better) Translates to: QADGLLLHETAETSAAQDSRFLL*VPTQPS Trigger: GGAAGGTTGGGTGGGAACTCAAAGCAGGAACCTAGA...GTCCTGTGCTGCTGAGGTCTCTGCTGTCTCATGGAGTAAGAGGCCATCTGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
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| 3UTR-3UTR GCA 90 bp | GATCAGGTTGGTCCCCTGAGGGGCCACCATACCTGTACTAGAACAAGGCAGATCTCTTTGACACTGGGATaGCCCACCCCAGCTCCATGT | + |
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Preference number: 2 (lower is better) Translates to: DQVGPLRGHHTCTRTRQISLTLG*PTPAPC Trigger: ACATGGAGCTGGGGTGGGGCATCCCAGTGTCAAAGA...GATCTGCCTTGTTCTAGTACAGGTATGGTGGCCCCTCAGGGGACCAACCTGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
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| 3UTR-3UTR GCA 90 bp | GGGCTGAGGGCTTGGCTGTGTCTGCCAAGGTGGGAACTACAGACCTGGTTATGGTCATCAGGAAAGGCTTaGAAGCTGTGCAGTGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: GLRAWLCLPRWELQTWLWSSGKA*KLCSAA Trigger: TGCTGCACTGCACAGCTTGCAAGCCTTTCCTGATGA...CCATAACCAGGTCTGTAGTTCCCACCTTGGCAGACACAGCCAAGCCCTCAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
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| 3UTR-3UTR GCA 90 bp | GCCTTTGTGTGGTGCTCAAGTAAAAGCTGCCAGTTACTGAAGAGAGAAGCAGGAGGCAATGGGCATGTGTaGCGGTGGCGCTGGACAGAG | + |
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Preference number: 2 (lower is better) Translates to: AFVWCSSKSCQLLKREAGGNGHV*RWRWTE Trigger: CTCTGTCCAGCGCCACCGGCACACATGCCCATTGCC...TCCTGCTTCTCTCTTCAGTAACTGGCAGCTTTTACTTGAGCACCACACAAAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142337.7 |
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| 3UTR CAA 90 bp | CCAGCCACCTCCATTAGAAGCACACCACTACCATTTGAGGTGCTCTaGGCTTCAAGAGAAAGACCAGGAGGCTTTGGGGGAAGAGCACTC | + |
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Preference number: 2 (lower is better) Translates to: PATSIRSTPLPFEVL*ASRERPGGFGGRAL Trigger: GAGTGCTCTTCCCCCAAAGCCTCCTGGTCTTTCTCTTGAAGCCAAGAGCACCTCAAATGGTAGTGGTGTGCTTCTAATGGAGGTGGCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
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| 3UTR-3UTR GCA 90 bp | CTGTGTCTGCCAAGGTGGGAACTACAGACCTGGTTATGGAACTCTCCTGGTCATTGTCTCAGCCAGACTTaGCTGTGGGCACATCTGTGC | + |
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Preference number: 2 (lower is better) Translates to: LCLPRWELQTWLWNSPGHCLSQT*LWAHLC Trigger: GCACAGATGTGCCCACAGGCAAGTCTGGCTGAGACA...ATGACCAGGAGAGTTCCATAACCAGGTCTGTAGTTCCCACCTTGGCAGACACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
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| 3UTR-3UTR CCA 90 bp | GGGATGCCCCACCCCAGCTCCATGTTGCAGAAACAGCCAGCCACCTCCATTAGACATTTGAGGTGCTCTTaGCTTCAAGAGAAAGACCAG | + |
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Preference number: 2 (lower is better) Translates to: GMPHPSSMLQKQPATSIRHLRCS*LQEKDQ Trigger: CTGGTCTTTCTCTTGAAGCCAAGAGCACCTCAAATG...TCTAATGGAGGTGGCTGGCTGTTTCTGCAACATGGAGCTGGGGTGGGGCATCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
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| 3UTR-3UTR CCA 90 bp | GTCATTTTCCTACTATTTCTTCACATACATGAGGGGGTCACCAGGGCTTCTGAGGACCCGGGTGGTACCTaGAGAGCAGGGAGTGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: VIFLLFLHIHEGVTRASEDPGGT*RAGSGK Trigger: CTTCCCACTCCCTGCTCTCCAGGTACCACCCGGGTC...CTCAGAAGCCCTGGTGACCCCCTCATGTATGTGAAGAAATAGTAGGAAAATGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGCCTTTGTGTGGTGCTCAAGTAAAAGCTGCCAGTTACTGAAGAGAGAAGCAGGGCTGGGGTGGAGGTaGTCCAAAGGCAATGGGCAT | + |
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Preference number: 2 (lower is better) Translates to: PAFVWCSSKSCQLLKREAGLGWR*SKGNGH Trigger: ATGCCCATTGCCTTTGGACCACCTCCACCCCAGCCC...TGCTTCTCTCTTCAGTAACTGGCAGCTTTTACTTGAGCACCACACAAAGGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142337.7 |
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| 3UTR CAA 90 bp | TGCAGAAACAGCCAGCCACCTCCATTAGAAGCACACCACTACCATTaGAGGTGCTCTTGGCTTCAAGAGAAAGACCAGGAGGCTTTGGGG | + |
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Preference number: 2 (lower is better) Translates to: CRNSQPPPLEAHHYH*RCSWLQEKDQEALG Trigger: CCCCAAAGCCTCCTGGTCTTTCTCTTGAAGCCAAGAGCACCTCAAATGGTAGTGGTGTGCTTCTAATGGAGGTGGCTGGCTGTTTCTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
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| 3UTR-3UTR TCA 90 bp | ACTGTGGACAGTGCCACCCCTAGGCAGGGGGTTCTGGGTCATATAAGTGTTGATAAAGCTGCCAGTTACTaGAGAGAGAAGCAGGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: TVDSATPRQGVLGHISVDKAASY*REKQER Trigger: CCTTTCCTGCTTCTCTCTTCAGTAACTGGCAGCTTT...ATCAACACTTATATGACCCAGAACCCCCTGCCTAGGGGTGGCACTGTCCACAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000142337.7 ENSMUST00000144897.2 |
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| 3UTR-3UTR TCA 90 bp | GATCAGGTTGGTCCCCTGAGGGGCCACCATACCTGTACTAGAACAAGGCAGATCGGGTCATATAAGTGTTaGTTGAATGAAGCACCAGCC | + |
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Preference number: 2 (lower is better) Translates to: DQVGPLRGHHTCTRTRQIGSYKC*LNEAPA Trigger: GGCTGGTGCTTCATTCAATCAACACTTATATGACCC...GATCTGCCTTGTTCTAGTACAGGTATGGTGGCCCCTCAGGGGACCAACCTGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGACCTCAGCAGCACAGGACCAAGGGTCTATCCAGGATTGGCTAGCACTGCCACAGGTGCTACCCTCTaGGCCTCTAATTATTATCTT | + |
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Preference number: 2 (lower is better) Translates to: RDLSSTGPRVYPGLASTATGATL*ASNYYL Trigger: AAGATAATAATTAGAGGCTCAGAGGGTAGCACCTGT...GGCAGTGCTAGCCAATCCTGGATAGACCCTTGGTCCTGTGCTGCTGAGGTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
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| 3UTR-3UTR TCA 90 bp | CTGTGTCTGCCAAGGTGGGAACTACAGACCTGGTTATGGAACTCTCCTGGTCATAGTTGTAGGTGGTTGTaGGAGACCATGTGGTGTTGG | + |
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Preference number: 2 (lower is better) Translates to: LCLPRWELQTWLWNSPGHSCRWL*ETMWCW Trigger: CCAACACCACATGGTCTCTCACAACCACCTACAACT...ATGACCAGGAGAGTTCCATAACCAGGTCTGTAGTTCCCACCTTGGCAGACACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGACCTCAGCAGCACAGGACCAAGGGTCTATCCAGGATTGGCTAGCACTGCCGAGACCATGTGGTGTTaGGAATTGAATTTGAGTCCT | + |
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Preference number: 2 (lower is better) Translates to: RDLSSTGPRVYPGLASTAETMWC*ELNLSP Trigger: AGGACTCAAATTCAATTCCCAACACCACATGGTCTC...GGCAGTGCTAGCCAATCCTGGATAGACCCTTGGTCCTGTGCTGCTGAGGTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
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| 3UTR-3UTR TCA 90 bp | GTCATTTTCCTACTATTTCTTCACATACATGAGGGGGTCACCAGGGCTTCTGAGCTTTGTGCTCCCAACTaGGGCTCCAAGTCACAGGTG | + |
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Preference number: 2 (lower is better) Translates to: VIFLLFLHIHEGVTRASELCAPN*GSKSQV Trigger: CACCTGTGACTTGGAGCCTCAGTTGGGAGCACAAAG...CTCAGAAGCCCTGGTGACCCCCTCATGTATGTGAAGAAATAGTAGGAAAATGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
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| 3UTR-3UTR CCA 90 bp | CCAACATTAATCATCGCCATGGGAAAGCAACTGAAGACAGTAGCTGTTACCTCTAGCCAGACTTGCCTGTaGGCACATCTGTGCGGGCAT | + |
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Preference number: 2 (lower is better) Translates to: PTLIIAMGKQLKTVAVTSSQTCL*AHLCGH Trigger: ATGCCCGCACAGATGTGCCCACAGGCAAGTCTGGCT...AGAGGTAACAGCTACTGTCTTCAGTTGCTTTCCCATGGCGATGATTAATGTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGCCTTTGTGTGGTGCTCAAGTAAAAGCTGCCAGTTACTGAAGAGAGAAGCAGACTGCATCTGGCCTTaGTACCTAGATCCAGCTGTC | + |
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Preference number: 2 (lower is better) Translates to: PAFVWCSSKSCQLLKREADCIWP*YLDPAV Trigger: GACAGCTGGATCTAGGTACCAAGGCCAGATGCAGTC...TGCTTCTCTCTTCAGTAACTGGCAGCTTTTACTTGAGCACCACACAAAGGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142337.7 |
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| 3UTR-3UTR CCA 90 bp | CCAACATTAATCATCGCCATGGGAAAGCAACTGAAGACAGTAGCTGTTACCTCTTCCTCTGTGTCCGCGTaGCACTGCCCAACCAGGTTT | + |
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Preference number: 2 (lower is better) Translates to: PTLIIAMGKQLKTVAVTSSSVSA*HCPTRF Trigger: AAACCTGGTTGGGCAGTGCCACGCGGACACAGAGGA...AGAGGTAACAGCTACTGTCTTCAGTTGCTTTCCCATGGCGATGATTAATGTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142337.7 |
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| 3UTR-3UTR CCA 90 bp | AAACTGTCTCAGCCAGACTTGCCTGTGGGCACATCTGTGCGGGCATTTTCTTTAATCCCAGCCTTTGTGTaGTGCTCAAGTAAAAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: KLSQPDLPVGTSVRAFSLIPAFV*CSSKSC Trigger: GCAGCTTTTACTTGAGCACCACACAAAGGCTGGGAT...TAAAGAAAATGCCCGCACAGATGTGCCCACAGGCAAGTCTGGCTGAGACAGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
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| 3UTR-3UTR CCA 90 bp | TTAATCATCGCCATGGGAAAGCAACTGAAGACAGTAGCTGTTACCTCTGAGAAAGCTGGACAGAGTTCATaGCGGAAGTCAGGTCGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: LIIAMGKQLKTVAVTSEKAGQSS*RKSGRS Trigger: GCTGCGACCTGACTTCCGCCATGAACTCTGTCCAGC...TTTCTCAGAGGTAACAGCTACTGTCTTCAGTTGCTTTCCCATGGCGATGATTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142337.7 |
||
| 3UTR-3UTR GCA 90 bp | CCAGCCTTTGTGTGGTGCTCAAGTAAAAGCTGCCAGTTACTGAAGAGAGAAGCACTGTGGGCACATCTGTaGGGGCATTTTCTTTATTGC | + |
|
Preference number: 2 (lower is better) Translates to: PAFVWCSSKSCQLLKREALWAHL*GHFLYC Trigger: GCAATAAAGAAAATGCCCGCACAGATGTGCCCACAG...TGCTTCTCTCTTCAGTAACTGGCAGCTTTTACTTGAGCACCACACAAAGGCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000142337.7 ENSMUST00000144897.2 |
||
| 3UTR-3UTR GCA 90 bp | CTGTGTCTGCCAAGGTGGGAACTACAGACCTGGTTATGGAACTCTCCTGGTCATTGTGAGTGTTTTGCCTaGATTGTAAACCACCAGTCT | + |
|
Preference number: 2 (lower is better) Translates to: LCLPRWELQTWLWNSPGHCECFA*IVNHQS Trigger: AGACTGGTGGTTTACAATGCAGGCAAAACACTCACA...ATGACCAGGAGAGTTCCATAACCAGGTCTGTAGTTCCCACCTTGGCAGACACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
||
| 3UTR-3UTR GCA 90 bp | CCAACATTAATCATCGCCATGGGAAAGCAACTGAAGACAGTAGCTGTTACCTCTCTGCAGGAACTCCTCTaGCAAGCAGATGATATGGGC | + |
|
Preference number: 2 (lower is better) Translates to: PTLIIAMGKQLKTVAVTSLQELL*QADDMG Trigger: GCCCATATCATCTGCTTGGCAGAGGAGTTCCTGCAG...AGAGGTAACAGCTACTGTCTTCAGTTGCTTTCCCATGGCGATGATTAATGTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142337.7 |
||
| 3UTR-3UTR CCA 90 bp | GCCTTTGTGTGGTGCTCAAGTAAAAGCTGCCAGTTACTGAAGAGAGAAGCAGGAATCCCAGCCTTTGTGTaGTGCTCAAGTAAAAGCTGC | + |
|
Preference number: 2 (lower is better) Translates to: AFVWCSSKSCQLLKREAGIPAFV*CSSKSC Trigger: GCAGCTTTTACTTGAGCACCACACAAAGGCTGGGAT...TCCTGCTTCTCTCTTCAGTAACTGGCAGCTTTTACTTGAGCACCACACAAAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000142337.7 ENSMUST00000144897.2 |
||
| 3UTR-3UTR CCA 90 bp | TTAATCATCGCCATGGGAAAGCAACTGAAGACAGTAGCTGTTACCTCTGAGAAATTTGGGACTAAGGGCTaGGGTGGAGGTGGTCCAAAG | + |
|
Preference number: 2 (lower is better) Translates to: LIIAMGKQLKTVAVTSEKFGTKG*GGGGPK Trigger: CTTTGGACCACCTCCACCCCAGCCCTTAGTCCCAAA...TTTCTCAGAGGTAACAGCTACTGTCTTCAGTTGCTTTCCCATGGCGATGATTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142337.7 |
||
| 3UTR-3UTR TCA 90 bp | TTAATCATCGCCATGGGAAAGCAACTGAAGACAGTAGCTGTTACCTCTGAGAAATCTAGGTTCCTGCTTTaGGTTCCCACCCAACCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: LIIAMGKQLKTVAVTSEKSRFLL*VPTQPS Trigger: GGAAGGTTGGGTGGGAACTCAAAGCAGGAACCTAGA...TTTCTCAGAGGTAACAGCTACTGTCTTCAGTTGCTTTCCCATGGCGATGATTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142337.7 ENSMUST00000144897.2 |
||
| 3UTR-3UTR TCA 90 bp | CCAACATTAATCATCGCCATGGGAAAGCAACTGAAGACAGTAGCTGTTACCTCTAAAGCTGCCAGTTACTaGAGAGAGAAGCAGGAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: PTLIIAMGKQLKTVAVTSKAASY*REKQER Trigger: CCTTTCCTGCTTCTCTCTTCAGTAACTGGCAGCTTT...AGAGGTAACAGCTACTGTCTTCAGTTGCTTTCCCATGGCGATGATTAATGTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142337.7 ENSMUST00000144897.2 |
||
| 3UTR-3UTR TCA 90 bp | TTAATCATCGCCATGGGAAAGCAACTGAAGACAGTAGCTGTTACCTCTGAGAAATTCTTTATTGCTGATTaGTGTGAGAAGGCCCAGCCC | + |
|
Preference number: 2 (lower is better) Translates to: LIIAMGKQLKTVAVTSEKFFIAD*CEKAQP Trigger: GGGCTGGGCCTTCTCACATCAATCAGCAATAAAGAA...TTTCTCAGAGGTAACAGCTACTGTCTTCAGTTGCTTTCCCATGGCGATGATTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142337.7 ENSMUST00000144897.2 |
||
| 3UTR-3UTR GCA 90 bp | CCAACATTAATCATCGCCATGGGAAAGCAACTGAAGACAGTAGCTGTTACCTCTTGCTCAAGTAAAAGCTaGCAGTTACTGAAGAGAGAA | + |
|
Preference number: 2 (lower is better) Translates to: PTLIIAMGKQLKTVAVTSCSSKS*QLLKRE Trigger: TTCTCTCTTCAGTAACTGGCAGCTTTTACTTGAGCA...AGAGGTAACAGCTACTGTCTTCAGTTGCTTTCCCATGGCGATGATTAATGTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142337.7 ENSMUST00000144897.2 |
||
| 3UTR GCA 72 bp | CTGGGGTGGAGGTGGTCCAAAGGCAATGGGCATGTGTaGCGGTGGCGCTGGACAGAGTTCATGGCGGAAGTC | + |
|
Preference number: 3 (lower is better) Translates to: LGWRWSKGNGHV*RWRWTEFMAEV Trigger: GACTTCCGCCATGAACTCTGTCCAGCGCCACCGGCACACATGCCCATTGCCTTTGGACCACCTCCACCCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142337.7 |
||
| 3UTR CCA 72 bp | GAAAGACCAGGAGGCTTTGGGGGAAGAGCACTCTGCTaGAGCTCACAGAGCCAGCTAGTGGTAGCTGCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: ERPGGFGGRALC*SSQSQLVVAAW Trigger: CCAGGCAGCTACCACTAGCTGGCTCTGTGAGCTCCAGCAGAGTGCTCTTCCCCCAAAGCCTCCTGGTCTTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGCCCACTGTGGACAGTGCCACCCCTAGGCAGGGGGTTCTGGGTCATATAAGTCCCTCCTCCCCCAAGTaGCTGGTCCCAACATTAATC | + |
|
Preference number: 3 (lower is better) Translates to: QPTVDSATPRQGVLGHISPSSPK*LVPTLI Trigger: GATTAATGTTGGGACCAGCAACTTGGGGGAGGAGGG...ACTTATATGACCCAGAACCCCCTGCCTAGGGGTGGCACTGTCCACAGTGGGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000142337.7 ENSMUST00000144897.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGATGCCCCACCCCAGCTCCATGTTGCAGAAACAGCCAGCCACCTCCATTAGAAAAGACCAGGAGGCTTaGGGGGAAGAGCACTCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: GMPHPSSMLQKQPATSIRKDQEA*GEEHSA Trigger: AGCAGAGTGCTCTTCCCCCAAAGCCTCCTGGTCTTT...TCTAATGGAGGTGGCTGGCTGTTTCTGCAACATGGAGCTGGGGTGGGGCATCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
||
| 3UTR TCA 72 bp | TCCAGCGAACTCTGGGGGACCAGAGACACAGGCCAGTaGGTTTTGAGGAACCTCAGGGCTGGAGTGCTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: SSELWGTRDTGQ*VLRNLRAGVLS Trigger: GGAAAGCACTCCAGCCCTGAGGTTCCTCAAAACTCACTGGCCTGTGTCTCTGGTCCCCCAGAGTTCGCTGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
||
| 3UTR TCA 72 bp | ATCCAGGATTGGCTAGCACTGCCCTGGCTCTCACCTTaGCCTTCATCCAGCGAACTCTGGGGGACCAGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: IQDWLALPWLSP*PSSSELWGTRD Trigger: GTCTCTGGTCCCCCAGAGTTCGCTGGATGAAGGTCAAGGTGAGAGCCAGGGCAGTGCTAGCCAATCCTGGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
||
| 3UTR GCA 72 bp | ACTCTGCTGGAGCTCACAGAGCCAGCTAGTGGTAGCTaGCTGGAAGGCAGGTCTGTCTTCAGGGCAGTGATC | + |
|
Preference number: 3 (lower is better) Translates to: TLLELTEPASGS*LEGRSVFRAVI Trigger: GATCACTGCCCTGAAGACAGACCTGCCTTCCAGGCAGCTACCACTAGCTGGCTCTGTGAGCTCCAGCAGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
||
| 3UTR GCA 72 bp | AGAGAAAGACCAGGAGGCTTTGGGGGAAGAGCACTCTaGTGGAGCTCACAGAGCCAGCTAGTGGTAGCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: RERPGGFGGRAL*WSSQSQLVVAA Trigger: GGCAGCTACCACTAGCTGGCTCTGTGAGCTCCAGCAGAGTGCTCTTCCCCCAAAGCCTCCTGGTCTTTCTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
||
| 3UTR GCA 72 bp | GTGCAGCAATCCCCTCTGCAGTCTTTGACACTGGGATaGCCCACCCCAGCTCCATGTTGCAGAAACAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: VQQSPLQSLTLG*PTPAPCCRNSQ Trigger: CTGGCTGTTTCTGCAACATGGAGCTGGGGTGGGGCATCCCAGTGTCAAAGACTGCAGAGGGGATTGCTGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
||
| 3UTR CCA 72 bp | TTATTGCTGATTGATGTGAGAAGGCCCAGCCCACTGTaGACAGTGCCACCCCTAGGCAGGGGGTTCTGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: LLLIDVRRPSPL*TVPPLGRGFWV Trigger: GACCCAGAACCCCCTGCCTAGGGGTGGCACTGTCCACAGTGGGCTGGGCCTTCTCACATCAATCAGCAATAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000142337.7 ENSMUST00000144897.2 |
||
| 3UTR TCA 72 bp | GGTCAGCATCCTGATAGACCATGCCAAGTATCTCACTaGCCCGGGTGGTACCTGGAGAGCAGGGAGTGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: GQHPDRPCQVSH*PGWYLESREWE Trigger: TTCCCACTCCCTGCTCTCCAGGTACCACCCGGGTCAGTGAGATACTTGGCATGGTCTATCAGGATGCTGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
||
| 3UTR TCA 72 bp | GTTCCTGCTTTGAGTTCCCACCCAACCTTCCCTCGCTaGTGGACTGGAAGTGTAACATGGGACAAGCCCCCT | + |
|
Preference number: 3 (lower is better) Translates to: VPALSSHPTFPR*WTGSVTWDKPP Trigger: AGGGGGCTTGTCCCATGTTACACTTCCAGTCCATCAGCGAGGGAAGGTTGGGTGGGAACTCAAAGCAGGAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000142337.7 ENSMUST00000144897.2 |
||
| 3UTR TCA 72 bp | AACTCTGGGGGACCAGAGACACAGGCCAGTGAGTTTTaGGGAACCTCAGGGCTGGAGTGCTTTCCAGAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: NSGGPETQASEF*GTSGLECFPEL Trigger: AAGCTCTGGAAAGCACTCCAGCCCTGAGGTTCCTCAAAACTCACTGGCCTGTGTCTCTGGTCCCCCAGAGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTGTGGACAGTGCCACCCCTAGGCAGGGGGTTCTGGGTCATATAAGTGTTGATTTACAGCTGGTCGTTTaGGGACTAAGGGCTGGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: TVDSATPRQGVLGHISVDLQLVV*GLRAGV Trigger: CACCCCAGCCCTTAGTCCCAAAACGACCAGCTGTAA...ATCAACACTTATATGACCCAGAACCCCCTGCCTAGGGGTGGCACTGTCCACAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000142337.7 |
||
| 3UTR GCA 72 bp | CTGGTTATGGAACTCTCCTGGTCATCAGGAAAGGCTTaGAAGCTGTGCAGTGCAGCAATCCCCTCTGCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: LVMELSWSSGKA*KLCSAAIPSAV Trigger: GACTGCAGAGGGGATTGCTGCACTGCACAGCTTGCAAGCCTTTCCTGATGACCAGGAGAGTTCCATAACCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGACTGGGGCTGAGGGCTTGGCTGTGTCTGCCAAGGTGGGAACTACAGACCTGCGGGCATTTTCTTTATaGCTGATTGATGTGAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: VTGAEGLAVSAKVGTTDLRAFSL*LIDVRR Trigger: CCTTCTCACATCAATCAGCAATAAAGAAAATGCCCG...CAGGTCTGTAGTTCCCACCTTGGCAGACACAGCCAAGCCCTCAGCCCCAGTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
||
| 3UTR TCA 72 bp | CTTATGTGTGAACACAAGGACCTTTGTGCTCCCAACTaGGGCTCCAAGTCACAGGTGCTACCCTCTGAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: LMCEHKDLCAPN*GSKSQVLPSEP Trigger: AGGCTCAGAGGGTAGCACCTGTGACTTGGAGCCTCAGTTGGGAGCACAAAGGTCCTTGTGTTCACACATAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
||
| 3UTR TCA 72 bp | CAGCTCTCTTCCATGTTCTGTGAGCGCCTTTTTCTGTaGCTCCCCTTCTCTCAGATCTCCATCCTGAACCCC | + |
|
Preference number: 3 (lower is better) Translates to: QLSSMFCERLFL*LPFSQISILNP Trigger: GGGGTTCAGGATGGAGATCTGAGAGAAGGGGAGTCACAGAAAAAGGCGCTCACAGAACATGGAAGAGAGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
||
| 3UTR GCA 72 bp | GAACTCTCCTGGTCATCAGGAAAGGCTTGCAAGCTGTaGAGTGCAGCAATCCCCTCTGCAGTCTTTGACACT | + |
|
Preference number: 3 (lower is better) Translates to: ELSWSSGKACKL*SAAIPSAVFDT Trigger: AGTGTCAAAGACTGCAGAGGGGATTGCTGCACTGCACAGCTTGCAAGCCTTTCCTGATGACCAGGAGAGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
||
| 3UTR GCA 72 bp | TCCAAATCCTCTTCCTCCTCTGTGTCCGCGTGGCACTaGCCAACCAGGTTTCCCCAAAGTAGTGATTTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: SKSSSSSVSAWH*PTRFPQSSDFL Trigger: CAAGAAATCACTACTTTGGGGAAACCTGGTTGGGCAGTGCCACGCGGACACAGAGGAGGAAGAGGATTTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142337.7 |
||
| 3UTR CCA 72 bp | ACCTCTGAGAAAGGTAAGGGAGGAAGCAAGGCCACATaGTTAGGCCAAAGCCTCCACTTCACGCCTTCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: TSEKGKGGSKAT*LGQSLHFTPSF Trigger: AAAGGAAGGCGTGAAGTGGAGGCTTTGGCCTAACCATGTGGCCTTGCTTCCTCCCTTACCTTTCTCAGAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142337.7 ENSMUST00000144897.2 |
||
| 3UTR CCA 72 bp | GCTTGGCTGTGTCTGCCAAGGTGGGAACTACAGACCTaGTTATGGAACTCTCCTGGTCATCAGGAAAGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: AWLCLPRWELQT*LWNSPGHQERL Trigger: AAGCCTTTCCTGATGACCAGGAGAGTTCCATAACCAGGTCTGTAGTTCCCACCTTGGCAGACACAGCCAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
||
| 3UTR CCA 72 bp | AGACACAGGCCAGTGAGTTTTGAGGAACCTCAGGGCTaGAGTGCTTTCCAGAGCTTCAAGACCCTGGTCATT | + |
|
Preference number: 3 (lower is better) Translates to: RHRPVSFEEPQG*SAFQSFKTLVI Trigger: AATGACCAGGGTCTTGAAGCTCTGGAAAGCACTCCAGCCCTGAGGTTCCTCAAAACTCACTGGCCTGTGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
||
| 3UTR CCA 72 bp | TCTAACTCCAAATCCTCTTCCTCCTCTGTGTCCGCGTaGCACTGCCCAACCAGGTTTCCCCAAAGTAGTGAT | + |
|
Preference number: 3 (lower is better) Translates to: SNSKSSSSSVSA*HCPTRFPQSSD Trigger: ATCACTACTTTGGGGAAACCTGGTTGGGCAGTGCCACGCGGACACAGAGGAGGAAGAGGATTTGGAGTTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142337.7 |
||
| 3UTR-3UTR CAA 90 bp | CCAGCCTTTGTGTGGTGCTCAAGTAAAAGCTGCCAGTTACTGAAGAGAGAAGCACCCTCCTCCCCCAAGTaGCTGGTCCCAACATTAATC | + |
|
Preference number: 3 (lower is better) Translates to: PAFVWCSSKSCQLLKREAPSSPK*LVPTLI Trigger: GATTAATGTTGGGACCAGCAACTTGGGGGAGGAGGG...TGCTTCTCTCTTCAGTAACTGGCAGCTTTTACTTGAGCACCACACAAAGGCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000142337.7 ENSMUST00000144897.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAGACCTCAGCAGCACAGGACCAAGGGTCTATCCAGGATTGGCTAGCACTGCCTGTTGGGAATTGAATTaGAGTCCTCTGCAAGAACAG | + |
|
Preference number: 3 (lower is better) Translates to: RDLSSTGPRVYPGLASTACWELN*SPLQEQ Trigger: CTGTTCTTGCAGAGGACTCAAATTCAATTCCCAACA...GGCAGTGCTAGCCAATCCTGGATAGACCCTTGGTCCTGTGCTGCTGAGGTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGTGTCTGCCAAGGTGGGAACTACAGACCTGGTTATGGAACTCTCCTGGTCATAGCCAGAAGATGCCATaGGATCCCTTGGAATTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: LCLPRWELQTWLWNSPGHSQKMP*DPLELE Trigger: CTCCAATTCCAAGGGATCCAATGGCATCTTCTGGCT...ATGACCAGGAGAGTTCCATAACCAGGTCTGTAGTTCCCACCTTGGCAGACACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
||
| 3UTR TCA 72 bp | TTGGTAGCTTTCCAAGGGATGCCTGGTGCTTATGTGTaGACACAAGGACCTTTGTGCTCCCAACTGAGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: LVAFQGMPGAYV*TQGPLCSQLRL Trigger: GAGCCTCAGTTGGGAGCACAAAGGTCCTTGTGTTCACACATAAGCACCAGGCATCCCTTGGAAAGCTACCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
||
| 3UTR TCA 72 bp | AATTTGAGTCCTCTGCAAGAACAGCCACTTAACCTCTaGGCTGGCTCTCCAGCCCCCATCAATGGACTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: NLSPLQEQPLNL*AGSPAPINGLL Trigger: CAAGAGTCCATTGATGGGGGCTGGAGAGCCAGCTCAGAGGTTAAGTGGCTGTTCTTGCAGAGGACTCAAATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
||
| 3UTR GCA 72 bp | TCTTGTTTGGTTTCAGTTGTCAACTTCACCCAGCCCTaGATTTTCGGAGGGCTCCTCAACCGGGAAACTGTC | + |
|
Preference number: 3 (lower is better) Translates to: SCLVSVVNFTQP*IFGGLLNRETV Trigger: GACAGTTTCCCGGTTGAGGAGCCCTCCGAAAATGCAGGGCTGGGTGAAGTTGACAACTGAAACCAAACAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
||
| 3UTR CCA 72 bp | AAGGTGGGAACTACAGACCTGGTTATGGAACTCTCCTaGTCATCAGGAAAGGCTTGCAAGCTGTGCAGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: KVGTTDLVMELS*SSGKACKLCSA Trigger: TGCACTGCACAGCTTGCAAGCCTTTCCTGATGACCAGGAGAGTTCCATAACCAGGTCTGTAGTTCCCACCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
||
| 3UTR CCA 72 bp | CCAGTCGAAAAGTTTGGTAGCTTTCCAAGGGATGCCTaGTGCTTATGTGTGAACACAAGGACCTTTGTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: PVEKFGSFPRDA*CLCVNTRTFVL Trigger: GAGCACAAAGGTCCTTGTGTTCACACATAAGCACCAGGCATCCCTTGGAAAGCTACCAAACTTTTCGACTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
||
| 3UTR GCA 72 bp | CTTATCCCAGCCTTTGTGTGGTGCTCAAGTAAAAGCTaGCAGTTACTGAAGAGAGAAGCAGGAAAGGTACAG | + |
|
Preference number: 3 (lower is better) Translates to: LIPAFVWCSSKS*QLLKREAGKVQ Trigger: CTGTACCTTTCCTGCTTCTCTCTTCAGTAACTGGCAGCTTTTACTTGAGCACCACACAAAGGCTGGGATAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142337.7 ENSMUST00000144897.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCATTTTCCTACTATTTCTTCACATACATGAGGGGGTCACCAGGGCTTCTGAGAGAGACCATGTGGTGTaGGGAATTGAATTTGAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: VIFLLFLHIHEGVTRASERDHVV*GIEFES Trigger: GGACTCAAATTCAATTCCCAACACCACATGGTCTCT...CTCAGAAGCCCTGGTGACCCCCTCATGTATGTGAAGAAATAGTAGGAAAATGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
||
| 3UTR TCA 72 bp | TCCCAACTGAGGCTCCAAGTCACAGGTGCTACCCTCTaGGCCTCTAATTATTATCTTGTTTGGTTTCAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: SQLRLQVTGATL*ASNYYLVWFQL Trigger: CAACTGAAACCAAACAAGATAATAATTAGAGGCTCAGAGGGTAGCACCTGTGACTTGGAGCCTCAGTTGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
||
| 3UTR GCA 72 bp | ACATCAGAAGGTACCCTTATCCCAGCCTTTGTGTGGTaGTCAAGTAAAAGCTGCCAGTTACTGAAGAGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: TSEGTLIPAFVW*SSKSCQLLKRE Trigger: TTCTCTCTTCAGTAACTGGCAGCTTTTACTTGAGCACCACACAAAGGCTGGGATAAGGGTACCTTCTGATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142337.7 ENSMUST00000144897.2 |
||
| 3UTR-3UTR CAA 90 bp | TTAATCATCGCCATGGGAAAGCAACTGAAGACAGTAGCTGTTACCTCTGAGAAACGGGCATTTTCTTTATaGCTGATTGATGTGAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: LIIAMGKQLKTVAVTSEKRAFSL*LIDVRR Trigger: CCTTCTCACATCAATCAGCAATAAAGAAAATGCCCG...TTTCTCAGAGGTAACAGCTACTGTCTTCAGTTGCTTTCCCATGGCGATGATTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142337.7 ENSMUST00000144897.2 |
||
| CDS-3UTR GCA 90 bp | TGGGAAGTGACTGGGGCTGAGGGCTTGGCTGTGTCTGCCAAGGTGGGAACTACAGGCAATGGGCATGTGTaGCGGTGGCGCTGGACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: WEVTGAEGLAVSAKVGTTGNGHV*RWRWTE Trigger: CTCTGTCCAGCGCCACCGGCACACATGCCCATTGCC...TGTAGTTCCCACCTTGGCAGACACAGCCAAGCCCTCAGCCCCAGTCACTTCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
||
| CDS-3UTR CCA 90 bp | GTGACTGGGGCTGAGGGCTTGGCTGTGTCTGCCAAGGTGGGAACTACAGACCTGGGGCTGGGGTGGAGGTaGTCCAAAGGCAATGGGCAT | + |
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Preference number: 4 (lower is better) Translates to: VTGAEGLAVSAKVGTTDLGLGWR*SKGNGH Trigger: ATGCCCATTGCCTTTGGACCACCTCCACCCCAGCCC...CAGGTCTGTAGTTCCCACCTTGGCAGACACAGCCAAGCCCTCAGCCCCAGTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
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| 3UTR CAA 72 bp | TCCTGCAGCAGACGCGCACACAGACTGCATCTGGCCTaGGTACCTAGATCCAGCTGTCGCTCGCTGTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: SCSRRAHRLHLA*VPRSSCRSLSA Trigger: GGCTGACAGCGAGCGACAGCTGGATCTAGGTACCAAGGCCAGATGCAGTCTGTGTGCGCGTCTGCTGCAGGA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142337.7 |
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| CDS-3UTR CCA 90 bp | GAGGGCTCCTCAACCGGGAAACTGTCTCAGCCAGACTTGCCTGTGGGCACATCTTTTGGGACTAAGGGCTaGGGTGGAGGTGGTCCAAAG | + |
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Preference number: 4 (lower is better) Translates to: EGSSTGKLSQPDLPVGTSFGTKG*GGGGPK Trigger: CTTTGGACCACCTCCACCCCAGCCCTTAGTCCCAAA...AGATGTGCCCACAGGCAAGTCTGGCTGAGACAGTTTCCCGGTTGAGGAGCCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
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| 3UTR CAA 72 bp | GACCTCAGCAGCACAGGACCAAGGGTCTATCCAGGATaGGCTAGCACTGCCCTGGCTCTCACCTTGACCTTC | + |
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Preference number: 4 (lower is better) Translates to: DLSSTGPRVYPG*ASTALALTLTF Trigger: GAAGGTCAAGGTGAGAGCCAGGGCAGTGCTAGCCAATCCTGGATAGACCCTTGGTCCTGTGCTGCTGAGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
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| CDS-3UTR TCA 90 bp | GCGTGGCACTGCCCAACCAGGTTTCCCCAAAGTAGTGATTTCTTGCAGCTAGGAAGGCGGCGTGAAGCTTaGGGATGTTGCCAGGCCCAT | + |
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Preference number: 4 (lower is better) Translates to: AWHCPTRFPQSSDFLQLGRRREA*GCCQAH Trigger: ATGGGCCTGGCAACATCCTCAAGCTTCACGCCGCCT...TCCTAGCTGCAAGAAATCACTACTTTGGGGAAACCTGGTTGGGCAGTGCCACGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142337.7 |
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| CDS-3UTR TCA 90 bp | CAACTAGATCAGGTTGGTCCCCTGAGGGGCCACCATACCTGTACTAGAACAAGGAGGCGGCGTGAAGCTTaGGGATGTTGCCAGGCCCAT | + |
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Preference number: 4 (lower is better) Translates to: QLDQVGPLRGHHTCTRTRRRREA*GCCQAH Trigger: ATGGGCCTGGCAACATCCTCAAGCTTCACGCCGCCT...CCTTGTTCTAGTACAGGTATGGTGGCCCCTCAGGGGACCAACCTGATCTAGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
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| CDS-3UTR TCA 90 bp | CAGGCAGATGGCCTCTTACTCCATGAGACAGCAGAGACCTCAGCAGCACAGGACACGGGAAACCGTGTATaGTCAGCACCATGTCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: QADGLLLHETAETSAAQDTGNRV*SAPCPR Trigger: CCTGGGACATGGTGCTGATCATACACGGTTTCCCGT...GTCCTGTGCTGCTGAGGTCTCTGCTGTCTCATGGAGTAAGAGGCCATCTGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
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| CDS-3UTR GCA 90 bp | GGGATGCCCCACCCCAGCTCCATGTTGCAGAAACAGCCAGCCACCTCCATTAGACTGCAGGAACTCCTCTaGCAAGCAGATGATATGGGC | + |
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Preference number: 4 (lower is better) Translates to: GMPHPSSMLQKQPATSIRLQELL*QADDMG Trigger: GCCCATATCATCTGCTTGGCAGAGGAGTTCCTGCAG...TCTAATGGAGGTGGCTGGCTGTTTCTGCAACATGGAGCTGGGGTGGGGCATCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
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| CDS-3UTR CCA 90 bp | GATCAGGTTGGTCCCCTGAGGGGCCACCATACCTGTACTAGAACAAGGCAGATCGCTGGACAGAGTTCATaGCGGAAGTCAGGTCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: DQVGPLRGHHTCTRTRQIAGQSS*RKSGRS Trigger: GCTGCGACCTGACTTCCGCCATGAACTCTGTCCAGC...GATCTGCCTTGTTCTAGTACAGGTATGGTGGCCCCTCAGGGGACCAACCTGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
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| CDS-3UTR CCA 90 bp | GGGATGCCCCACCCCAGCTCCATGTTGCAGAAACAGCCAGCCACCTCCATTAGAGACTGCATCTGGCCTTaGTACCTAGATCCAGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: GMPHPSSMLQKQPATSIRDCIWP*YLDPAV Trigger: GACAGCTGGATCTAGGTACCAAGGCCAGATGCAGTC...TCTAATGGAGGTGGCTGGCTGTTTCTGCAACATGGAGCTGGGGTGGGGCATCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
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| 3UTR CAA 72 bp | AGGTGCTCTTGGCTTCAAGAGAAAGACCAGGAGGCTTaGGGGGAAGAGCACTCTGCTGGAGCTCACAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: RCSWLQEKDQEA*GEEHSAGAHRA Trigger: GGCTCTGTGAGCTCCAGCAGAGTGCTCTTCCCCCAAAGCCTCCTGGTCTTTCTCTTGAAGCCAAGAGCACCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
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| 3UTR CAA 72 bp | TATCCAGGATTGGCTAGCACTGCCCTGGCTCTCACCTaGACCTTCATCCAGCGAACTCTGGGGGACCAGAGA | + |
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Preference number: 4 (lower is better) Translates to: YPGLASTALALT*TFIQRTLGDQR Trigger: TCTCTGGTCCCCCAGAGTTCGCTGGATGAAGGTCAAGGTGAGAGCCAGGGCAGTGCTAGCCAATCCTGGATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
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| CDS-3UTR GCA 90 bp | TTAATCATCGCCATGGGAAAGCAACTGAAGACAGTAGCTGTTACCTCTGAGAAACAAAGGCAGCCTCGCTaGGCAGGCGCGGCCCCACGT | + |
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Preference number: 4 (lower is better) Translates to: LIIAMGKQLKTVAVTSEKQRQPR*AGAAPR Trigger: ACGTGGGGCCGCGCCTGCGCAGCGAGGCTGCCTTTG...TTTCTCAGAGGTAACAGCTACTGTCTTCAGTTGCTTTCCCATGGCGATGATTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
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| 3UTR CAA 72 bp | AAGTGTAACATGGGACAAGCCCCCTCCTCCCCCAAGTaGCTGGTCCCAACATTAATCATCGCCATGGGAAAG | + |
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Preference number: 4 (lower is better) Translates to: KCNMGQAPSSPK*LVPTLIIAMGK Trigger: CTTTCCCATGGCGATGATTAATGTTGGGACCAGCAACTTGGGGGAGGAGGGGGCTTGTCCCATGTTACACTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000142337.7 ENSMUST00000144897.2 |
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| 3UTR CAA 72 bp | TTGCCTGTGGGCACATCTGTGCGGGCATTTTCTTTATaGCTGATTGATGTGAGAAGGCCCAGCCCACTGTGG | + |
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Preference number: 4 (lower is better) Translates to: LPVGTSVRAFSL*LIDVRRPSPLW Trigger: CCACAGTGGGCTGGGCCTTCTCACATCAATCAGCAATAAAGAAAATGCCCGCACAGATGTGCCCACAGGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
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| CDS-3UTR CCA 90 bp | CCAACATTAATCATCGCCATGGGAAAGCAACTGAAGACAGTAGCTGTTACCTCTGTGGTCCAAAGGCAATaGGCATGTGTGCCGGTGGCG | + |
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Preference number: 4 (lower is better) Translates to: PTLIIAMGKQLKTVAVTSVVQRQ*ACVPVA Trigger: CGCCACCGGCACACATGCCCATTGCCTTTGGACCAC...AGAGGTAACAGCTACTGTCTTCAGTTGCTTTCCCATGGCGATGATTAATGTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
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| 3UTR CAA 72 bp | CAATGGACTCTTGGGGGTAGAGTCCAGTCGAAAAGTTaGGTAGCTTTCCAAGGGATGCCTGGTGCTTATGTG | + |
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Preference number: 4 (lower is better) Translates to: QWTLGGRVQSKS*VAFQGMPGAYV Trigger: CACATAAGCACCAGGCATCCCTTGGAAAGCTACCAAACTTTTCGACTGGACTCTACCCCCAAGAGTCCATTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
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| CDS-3UTR CAA 90 bp | GAGGGCTCCTCAACCGGGAAACTGTCTCAGCCAGACTTGCCTGTGGGCACATCTTTACAGCTGGTCGTTTaGGGACTAAGGGCTGGGGTG | + |
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Preference number: 5 (lower is better) Translates to: EGSSTGKLSQPDLPVGTSLQLVV*GLRAGV Trigger: CACCCCAGCCCTTAGTCCCAAAACGACCAGCTGTAA...AGATGTGCCCACAGGCAAGTCTGGCTGAGACAGTTTCCCGGTTGAGGAGCCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
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| CDS-3UTR CAA 90 bp | GCCTTTGTGTGGTGCTCAAGTAAAAGCTGCCAGTTACTGAAGAGAGAAGCAGGACAAAGTAGTGATTTCTaGCAGCTAGGACAATGTCCC | + |
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Preference number: 5 (lower is better) Translates to: AFVWCSSKSCQLLKREAGQSSDF*QLGQCP Trigger: GGGACATTGTCCTAGCTGCAAGAAATCACTACTTTG...TCCTGCTTCTCTCTTCAGTAACTGGCAGCTTTTACTTGAGCACCACACAAAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144897.2 |
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