RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLX (Mus musculus)

Ensembl gene IDs: ENSMUSG00000095063

Ensembl transcript IDs: ENSMUST00000096913.4

Found 29 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 72 bp TACCAGCAAGTGAGAAATATGAATGCTTCATTAGTCTaGAGATGGGAAAGGAGAAGAGTACTTCAGAGTATG +
Preference number: 3 (lower is better)
Translates to: YQQVRNMNASLV*RWERRRVLQSM
Trigger: CATACTCTGAAGTACTCTTCTCCTTTCCCATCTTCAGACTAATGAAGCATTCATATTTCTCACTTGCTGGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096913.4
CDS-3UTR TCA 90 bp GTACCAGCAAGTGAGAAATATGAATGCTTCATTAGTCTGAAGATGGGAAAGGAGCTCTTTACTTCAGAATaGGCCTGCTCTTCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: VPASEKYECFISLKMGKELFTSE*ACSSSS
Trigger: TGAAGAAGAAGAGCAGGCTCATTCTGAAGTAAAGAG...CTCCTTTCCCATCTTCAGACTAATGAAGCATTCATATTTCTCACTTGCTGGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096913.4
CDS-3UTR CCA 90 bp GTACCAGCAAGTGAGAAATATGAATGCTTCATTAGTCTGAAGATGGGAAAGGAGGCATATCGTAGTTGTTaGTCTCCATGTTCATCAAAC +
Preference number: 4 (lower is better)
Translates to: VPASEKYECFISLKMGKEAYRSC*SPCSSN
Trigger: GTTTGATGAACATGGAGACCAACAACTACGATATGC...CTCCTTTCCCATCTTCAGACTAATGAAGCATTCATATTTCTCACTTGCTGGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096913.4
CDS-3UTR GCA 90 bp GTACCAGCAAGTGAGAAATATGAATGCTTCATTAGTCTGAAGATGGGAAAGGAGTACTACTTCAGGATTTaGATTCCCATCATCATGAGT +
Preference number: 4 (lower is better)
Translates to: VPASEKYECFISLKMGKEYYFRI*IPIIMS
Trigger: ACTCATGATGATGGGAATGCAAATCCTGAAGTAGTA...CTCCTTTCCCATCTTCAGACTAATGAAGCATTCATATTTCTCACTTGCTGGTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096913.4
CDS-3UTR GCA 90 bp TTGGTTACAAATGTACCAGCAAGTGAGAAATATGAATGCTTCATTAGTCTGAAGCTCATGTTTGCCAAATaGTGGCCTCTTTACTTCAGA +
Preference number: 4 (lower is better)
Translates to: LVTNVPASEKYECFISLKLMFAK*WPLYFR
Trigger: TCTGAAGTAAAGAGGCCAGCATTTGGCAAACATGAG...CTTCAGACTAATGAAGCATTCATATTTCTCACTTGCTGGTACATTTGTAACCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096913.4
CDS-3UTR CCA 90 bp GTACCAGCAAGTGAGAAATATGAATGCTTCATTAGTCTGAAGATGGGAAAGGAGATCATCATGAGTTACTaGATTCTGTACTTCCATAAG +
Preference number: 4 (lower is better)
Translates to: VPASEKYECFISLKMGKEIIMSY*ILYFHK
Trigger: CTTATGGAAGTACAGAATCCAGTAACTCATGATGAT...CTCCTTTCCCATCTTCAGACTAATGAAGCATTCATATTTCTCACTTGCTGGTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096913.4
CDS-3UTR GCA 90 bp TTGGTTACAAATGTACCAGCAAGTGAGAAATATGAATGCTTCATTAGTCTGAAGGCATATTCTCATGTTTaGCAAATGCTGGCCTCTTTA +
Preference number: 4 (lower is better)
Translates to: LVTNVPASEKYECFISLKAYSHV*QMLASL
Trigger: TAAAGAGGCCAGCATTTGGCAAACATGAGAATATGC...CTTCAGACTAATGAAGCATTCATATTTCTCACTTGCTGGTACATTTGTAACCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096913.4
CDS-3UTR GCA 90 bp TTGGTTACAAATGTACCAGCAAGTGAGAAATATGAATGCTTCATTAGTCTGAAGTCCATATCAAACTTCTaGTCACACAATTTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: LVTNVPASEKYECFISLKSISNF*SHNLLL
Trigger: CAACAACAAATTGTGTGAGCAGAAGTTTGATATGGA...CTTCAGACTAATGAAGCATTCATATTTCTCACTTGCTGGTACATTTGTAACCAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096913.4
CDS-3UTR CAA 90 bp GTACCAGCAAGTGAGAAATATGAATGCTTCATTAGTCTGAAGATGGGAAAGGAGCATGCATGTCTTCAATaGCTTCCAGGGTCTGACTCT +
Preference number: 5 (lower is better)
Translates to: VPASEKYECFISLKMGKEHACLQ*LPGSDS
Trigger: AGAGTCAGACCCTGGAAGCAATTGAAGACATGCATG...CTCCTTTCCCATCTTCAGACTAATGAAGCATTCATATTTCTCACTTGCTGGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096913.4
CDS-3UTR CAA 90 bp GTACCAGCAAGTGAGAAATATGAATGCTTCATTAGTCTGAAGATGGGAAAGGAGGGCATATTCTCATGTTaGCCAAATGCTGGCCTCTTT +
Preference number: 5 (lower is better)
Translates to: VPASEKYECFISLKMGKEGIFSC*PNAGLF
Trigger: AAAGAGGCCAGCATTTGGCAAACATGAGAATATGCC...CTCCTTTCCCATCTTCAGACTAATGAAGCATTCATATTTCTCACTTGCTGGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096913.4
CDS-3UTR CAA 90 bp GTACCAGCAAGTGAGAAATATGAATGCTTCATTAGTCTGAAGATGGGAAAGGAGCTACTACTTCAGGATTaGCATTCCCATCATCATGAG +
Preference number: 5 (lower is better)
Translates to: VPASEKYECFISLKMGKELLLQD*HSHHHE
Trigger: CTCATGATGATGGGAATGCAAATCCTGAAGTAGTAG...CTCCTTTCCCATCTTCAGACTAATGAAGCATTCATATTTCTCACTTGCTGGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096913.4
CDS CCA 90 bp ATAATGTCTCTTCACCATCAACATCAAAAAGCATATCGTAGTTGTTaGTCTCCATGTTCATCAAACCCTCCATGGACTTCTCATGCATGT +
Preference number: 5 (lower is better)
Translates to: IMSLHHQHQKAYRSC*SPCSSNPPWTSHAC
Trigger: ACATGCATGAGAAGTCCATGGAGGGTTTGATGAACATGGAGACCAACAACTACGATATGCTTTTTGATGTTGATGGTGAAGAGACATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000096913.4
CDS-3UTR CAA 90 bp TTGGTTACAAATGTACCAGCAAGTGAGAAATATGAATGCTTCATTAGTCTGAAGAATTCCAGTTTTCCATaGGTGTCTCTACAGAACGTG +
Preference number: 5 (lower is better)
Translates to: LVTNVPASEKYECFISLKNSSFP*VSLQNV
Trigger: CACGTTCTGTAGAGACACCAATGGAAAACTGGAATT...CTTCAGACTAATGAAGCATTCATATTTCTCACTTGCTGGTACATTTGTAACCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096913.4
CDS-3UTR CAA 90 bp TTGGTTACAAATGTACCAGCAAGTGAGAAATATGAATGCTTCATTAGTCTGAAGATAAGTAACCATCCTTaGGTATCACCCACAGTTTCT +
Preference number: 5 (lower is better)
Translates to: LVTNVPASEKYECFISLKISNHP*VSPTVS
Trigger: AGAAACTGTGGGTGATACCAAAGGATGGTTACTTAT...CTTCAGACTAATGAAGCATTCATATTTCTCACTTGCTGGTACATTTGTAACCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096913.4
CDS-3UTR CAA 90 bp TTGGTTACAAATGTACCAGCAAGTGAGAAATATGAATGCTTCATTAGTCTGAAGTGCTCACACAATTTGTaGTTGATCTTCTTTCGTGTA +
Preference number: 5 (lower is better)
Translates to: LVTNVPASEKYECFISLKCSHNL*LIFFRV
Trigger: TACACGAAAGAAGATCAACAACAAATTGTGTGAGCA...CTTCAGACTAATGAAGCATTCATATTTCTCACTTGCTGGTACATTTGTAACCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096913.4
CDS GCA 72 bp CATCTGCTTCTACGTGAGGCGGCATATTCTCATGTTTaGCAAATGCTGGCCTCTTTACTTCAGAATGAGCCT +
Preference number: 6 (lower is better)
Translates to: HLLLREAAYSHV*QMLASLLQNEP
Trigger: AGGCTCATTCTGAAGTAAAGAGGCCAGCATTTGGCAAACATGAGAATATGCCGCCTCACGTAGAAGCAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096913.4
CDS GCA 72 bp CAAACCCTCCATGGACTTCTCATGCATGTCTTCAATTaGTTCCAGGGTCTGACTCTGACTACATTCGAACAG +
Preference number: 6 (lower is better)
Translates to: QTLHGLLMHVFN*FQGLTLTTFEQ
Trigger: CTGTTCGAATGTAGTCAGAGTCAGACCCTGGAAGCAATTGAAGACATGCATGAGAAGTCCATGGAGGGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096913.4
CDS CCA 72 bp CGTAGTTGTTGGTCTCCATGTTCATCAAACCCTCCATaGACTTCTCATGCATGTCTTCAATTGCTTCCAGGG +
Preference number: 6 (lower is better)
Translates to: RSCWSPCSSNPP*TSHACLQLLPG
Trigger: CCCTGGAAGCAATTGAAGACATGCATGAGAAGTCCATGGAGGGTTTGATGAACATGGAGACCAACAACTACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096913.4
CDS CAA 72 bp TCAAACCCTCCATGGACTTCTCATGCATGTCTTCAATaGCTTCCAGGGTCTGACTCTGACTACATTCGAACA +
Preference number: 6 (lower is better)
Translates to: SNPPWTSHACLQ*LPGSDSDYIRT
Trigger: TGTTCGAATGTAGTCAGAGTCAGACCCTGGAAGCAATTGAAGACATGCATGAGAAGTCCATGGAGGGTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096913.4
CDS TCA 72 bp TCTTGTTCATCTCTTATATCTTCATCTGCTTCTACGTaGGGCGGCATATTCTCATGTTTGCCAAATGCTGGC +
Preference number: 6 (lower is better)
Translates to: SCSSLISSSAST*GGIFSCLPNAG
Trigger: GCCAGCATTTGGCAAACATGAGAATATGCCGCCTCACGTAGAAGCAGATGAAGATATAAGAGATGAACAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096913.4
CDS CAA 72 bp CTTGCTGTTCACCACTTAACAAATTCCAGTTTTCCATaGGTGTCTCTACAGAACGTGCAAAACGCTGCCATT +
Preference number: 6 (lower is better)
Translates to: LAVHHLTNSSFP*VSLQNVQNAAI
Trigger: AATGGCAGCGTTTTGCACGTTCTGTAGAGACACCAATGGAAAACTGGAATTTGTTAAGTGGTGAACAGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000096913.4
CDS TCA 72 bp TCATGTTTGCCAAATGCTGGCCTCTTTACTTCAGAATaGGCCTGCTCTTCTTCTTCATCTGAATCAAAGTCA +
Preference number: 6 (lower is better)
Translates to: SCLPNAGLFTSE*ACSSSSSESKS
Trigger: TGACTTTGATTCAGATGAAGAAGAAGAGCAGGCTCATTCTGAAGTAAAGAGGCCAGCATTTGGCAAACATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096913.4
CDS TCA 72 bp TGTCTCTACAGAACGTGCAAAACGCTGCCATTCCACTaGGAAACTTACGTTTTCTCCAGATTTATCCAACAT +
Preference number: 6 (lower is better)
Translates to: CLYRTCKTLPFH*ETYVFSRFIQH
Trigger: ATGTTGGATAAATCTGGAGAAAACGTAAGTTTCTCAGTGGAATGGCAGCGTTTTGCACGTTCTGTAGAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000096913.4
CDS CCA 72 bp CTTCACCATCAACATCAAAAAGCATATCGTAGTTGTTaGTCTCCATGTTCATCAAACCCTCCATGGACTTCT +
Preference number: 6 (lower is better)
Translates to: LHHQHQKAYRSC*SPCSSNPPWTS
Trigger: AGAAGTCCATGGAGGGTTTGATGAACATGGAGACCAACAACTACGATATGCTTTTTGATGTTGATGGTGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000096913.4
CDS GCA 72 bp CTTCTTTCGTGTATCTCCAACTACTACTTCAGGATTTaGATTCCCATCATCATGAGTTACTGGATTCTGTAC +
Preference number: 6 (lower is better)
Translates to: LLSCISNYYFRI*IPIIMSYWILY
Trigger: GTACAGAATCCAGTAACTCATGATGATGGGAATGCAAATCCTGAAGTAGTAGTTGGAGATACACGAAAGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096913.4
CDS CCA 72 bp TACTTCAGGATTTGCATTCCCATCATCATGAGTTACTaGATTCTGTACTTCCATAAGGTCCAATTCAGAAGC +
Preference number: 6 (lower is better)
Translates to: YFRICIPIIMSY*ILYFHKVQFRS
Trigger: GCTTCTGAATTGGACCTTATGGAAGTACAGAATCCAGTAACTCATGATGATGGGAATGCAAATCCTGAAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096913.4
CDS CAA 72 bp ACTTACGTTTTCTCCAGATTTATCCAACATACTGTCTaGTTCATCTCTTATATCTTCATCTGCTTCTACGTG +
Preference number: 6 (lower is better)
Translates to: TYVFSRFIQHTV*FISYIFICFYV
Trigger: CACGTAGAAGCAGATGAAGATATAAGAGATGAACAAGACAGTATGTTGGATAAATCTGGAGAAAACGTAAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096913.4
CDS CAA 72 bp TGTATATCCATATCAAACTTCTGCTCACACAATTTGTaGTTGATCTTCTTTCGTGTATCTCCAACTACTACT +
Preference number: 6 (lower is better)
Translates to: CISISNFCSHNL*LIFFRVSPTTT
Trigger: AGTAGTAGTTGGAGATACACGAAAGAAGATCAACAACAAATTGTGTGAGCAGAAGTTTGATATGGATATACA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096913.4
CDS CAA 72 bp TTCTGTATATCCATATCAAACTTCTGCTCACACAATTaGTTGTTGATCTTCTTTCGTGTATCTCCAACTACT +
Preference number: 6 (lower is better)
Translates to: FCISISNFCSHN*LLIFFRVSPTT
Trigger: AGTAGTTGGAGATACACGAAAGAAGATCAACAACAAATTGTGTGAGCAGAAGTTTGATATGGATATACAGAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096913.4