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Pregenerated sensors for SLURP2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000075605

Ensembl transcript IDs: ENSMUST00000057932.8

Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACACAGGACTTCATTCAGAACCTCCCAAAGAAGTGTGAGTTGGGGTaGGGGCTTTGGGATAGCCAAGCTGGAGTGATCTCCAAGGACCAG +
Preference number: 1 (lower is better)
Translates to: TQDFIQNLPKKCELG*GLWDSQAGVISKDQ
Trigger: CTGGTCCTTGGAGATCACTCCAGCTTGGCTATCCCAAAGCCCCCACCCCAACTCACACTTCTTTGGGAGGTTCTGAATGAAGTCCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057932.8
3UTR CAA 90 bp GGATTTACACAGGACTTCATTCAGAACCTCCCAAAGAAGTGTGAGTaGGGGTGGGGGCTTTGGGATAGCCAAGCTGGAGTGATCTCCAAG +
Preference number: 2 (lower is better)
Translates to: GFTQDFIQNLPKKCE*GWGLWDSQAGVISK
Trigger: CTTGGAGATCACTCCAGCTTGGCTATCCCAAAGCCCCCACCCCAACTCACACTTCTTTGGGAGGTTCTGAATGAAGTCCTGTGTAAATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000057932.8
CDS-3UTR CCA 90 bp GAGTTGGGGTGGGGGCTTTGGGATAGCCAAGCTGGAGTGATCTCCAAGGACCAGGTGGGTGGAGCTCCATaGGCAGCTAGACGGGCGAGA +
Preference number: 4 (lower is better)
Translates to: ELGWGLWDSQAGVISKDQVGGAP*AARRAR
Trigger: TCTCGCCCGTCTAGCTGCCCATGGAGCTCCACCCAC...CTGGTCCTTGGAGATCACTCCAGCTTGGCTATCCCAAAGCCCCCACCCCAACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000057932.8
CDS-3UTR CCA 90 bp CCAGGCCTAACCAAGGGGCATGGCATTGTTCTGTGGAGCCAGCTGGGAGTGGAGAATCCCTTGCACAGGTaGCATTGCAGGCCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: PGLTKGHGIVLWSQLGVENPLHR*HCRPCV
Trigger: AACACAGGGCCTGCAATGCCACCTGTGCAAGGGATT...CTCCACTCCCAGCTGGCTCCACAGAACAATGCCATGCCCCTTGGTTAGGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057932.8
CDS-3UTR CCA 90 bp CCTAACCAAGGGGCATGGCATTGTTCTGTGGAGCCAGCTGGGAGTGGAGGAGTGTTGCAGAGATTGGACTaGCAGCAGGCGATGGATACA +
Preference number: 4 (lower is better)
Translates to: PNQGAWHCSVEPAGSGGVLQRLD*QQAMDT
Trigger: TGTATCCATCGCCTGCTGCCAGTCCAATCTCTGCAA...CACTCCTCCACTCCCAGCTGGCTCCACAGAACAATGCCATGCCCCTTGGTTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057932.8
3UTR CAA 72 bp CAGGACTTCATTCAGAACCTCCCAAAGAAGTGTGAGTaGGGGTGGGGGCTTTGGGATAGCCAAGCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: QDFIQNLPKKCE*GWGLWDSQAGV
Trigger: CACTCCAGCTTGGCTATCCCAAAGCCCCCACCCCAACTCACACTTCTTTGGGAGGTTCTGAATGAAGTCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000057932.8
CDS-3UTR TCA 90 bp ACTTCATTCAGAACCTCCCAAAGAAGTGTGAGTTGGGGTGGGGGCTTTGGGATACAGGCGATGGATACATaGGGACCTAAGCCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: TSFRTSQRSVSWGGGFGIQAMDT*GPKPKL
Trigger: CAGCTTGGGCTTAGGTCCTCATGTATCCATCGCCTG...TATCCCAAAGCCCCCACCCCAACTCACACTTCTTTGGGAGGTTCTGAATGAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000057932.8
CDS-3UTR GCA 90 bp GACTTCATTCAGAACCTCCCAAAGAAGTGTGAGTTGGGGTGGGGGCTTTGGGATTTGCACAGGTGGCATTaGAGGCCCTGTGTTACAGCT +
Preference number: 4 (lower is better)
Translates to: DFIQNLPKKCELGWGLWDLHRWH*RPCVTA
Trigger: AGCTGTAACACAGGGCCTGCAATGCCACCTGTGCAA...ATCCCAAAGCCCCCACCCCAACTCACACTTCTTTGGGAGGTTCTGAATGAAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000057932.8
CDS-3UTR GCA 90 bp GATTTACACAGGACTTCATTCAGAACCTCCCAAAGAAGTGTGAGTTGGGGTGGGTTACAGCTAGCTCCATaGTCAAGACCACGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: DLHRTSFRTSQRSVSWGGLQLAP*SRPRPE
Trigger: TTCTGGCCGTGGTCTTGAGCATGGAGCTAGCTGTAA...CCCACCCCAACTCACACTTCTTTGGGAGGTTCTGAATGAAGTCCTGTGTAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057932.8
CDS-3UTR CCA 90 bp CACAGTGGATTTACACAGGACTTCATTCAGAACCTCCCAAAGAAGTGTGAGTTGGCAATGATGACACAGTaGGTGGAGCTCCATGGGCAG +
Preference number: 4 (lower is better)
Translates to: HSGFTQDFIQNLPKKCELAMMTQ*VELHGQ
Trigger: CTGCCCATGGAGCTCCACCCACTGTGTCATCATTGC...CAACTCACACTTCTTTGGGAGGTTCTGAATGAAGTCCTGTGTAAATCCACTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057932.8
CDS-3UTR GCA 90 bp GTAGTTTTTATTGGGAGATTTGTTGACACTGAGGGTAACCCGCAGATTGGATCTATCCTCCAAATCCCTTaGACAGGTGGCATTGCAGGC +
Preference number: 4 (lower is better)
Translates to: VVFIGRFVDTEGNPQIGSILQIP*TGGIAG
Trigger: GCCTGCAATGCCACCTGTGCAAGGGATTTGGAGGAT...AGATCCAATCTGCGGGTTACCCTCAGTGTCAACAAATCTCCCAATAAAAACTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057932.8
3UTR CAA 72 bp TTGGGAGATTTGTTGACACTGAGGGTAACCCGCAGATaGGATCTTAAGCTTGTATCACAGTGGATTTACACA +
Preference number: 4 (lower is better)
Translates to: LGDLLTLRVTRR*DLKLVSQWIYT
Trigger: TGTGTAAATCCACTGTGATACAAGCTTAAGATCCAATCTGCGGGTTACCCTCAGTGTCAACAAATCTCCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057932.8
CDS GCA 90 bp CTAGACGGGCGAGAGCATCCTCCAAATCCCTTGCACAGGTGGCATTaGAGGCCCTGTGTTACAGCTAGCTCCATGCTCAAGACCACGGCC +
Preference number: 5 (lower is better)
Translates to: LDGREHPPNPLHRWH*RPCVTASSMLKTTA
Trigger: GGCCGTGGTCTTGAGCATGGAGCTAGCTGTAACACAGGGCCTGCAATGCCACCTGTGCAAGGGATTTGGAGGATGCTCTCGCCCGTCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057932.8
CDS CCA 90 bp GGGCAGCTAGACGGGCGAGAGCATCCTCCAAATCCCTTGCACAGGTaGCATTGCAGGCCCTGTGTTACAGCTAGCTCCATGCTCAAGACC +
Preference number: 5 (lower is better)
Translates to: GQLDGREHPPNPLHR*HCRPCVTASSMLKT
Trigger: GGTCTTGAGCATGGAGCTAGCTGTAACACAGGGCCTGCAATGCCACCTGTGCAAGGGATTTGGAGGATGCTCTCGCCCGTCTAGCTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057932.8
CDS CCA 90 bp AGATCTGTAAAGCTGATGGGAGAACGGGTGGCAATGATGACACAGTaGGTGGAGCTCCATGGGCAGCTAGACGGGCGAGAGCATCCTCCA +
Preference number: 5 (lower is better)
Translates to: RSVKLMGERVAMMTQ*VELHGQLDGREHPP
Trigger: TGGAGGATGCTCTCGCCCGTCTAGCTGCCCATGGAGCTCCACCCACTGTGTCATCATTGCCACCCGTTCTCCCATCAGCTTTACAGATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057932.8
CDS CCA 90 bp TGGACTGGCAGCAGGCGATGGATACATGAGGACCTAAGCCCAAGCTaGAGACATCAGGACAGCCACTGTAGCACATCTTCGTCACCAGAG +
Preference number: 5 (lower is better)
Translates to: WTGSRRWIHEDLSPS*RHQDSHCSTSSSPE
Trigger: CTCTGGTGACGAAGATGTGCTACAGTGGCTGTCCTGATGTCTCCAGCTTGGGCTTAGGTCCTCATGTATCCATCGCCTGCTGCCAGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057932.8
CDS-3UTR CAA 90 bp AAGCTTGTATCACAGTGGATTTACACAGGACTTCATTCAGAACCTCCCAAAGAACTTGCACAGGTGGCATaGCAGGCCCTGTGTTACAGC +
Preference number: 5 (lower is better)
Translates to: KLVSQWIYTGLHSEPPKELAQVA*QALCYS
Trigger: GCTGTAACACAGGGCCTGCAATGCCACCTGTGCAAG...TTCTTTGGGAGGTTCTGAATGAAGTCCTGTGTAAATCCACTGTGATACAAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057932.8
CDS CAA 72 bp GGGCAGCTAGACGGGCGAGAGCATCCTCCAAATCCCTaGCACAGGTGGCATTGCAGGCCCTGTGTTACAGCT +
Preference number: 6 (lower is better)
Translates to: GQLDGREHPPNP*HRWHCRPCVTA
Trigger: AGCTGTAACACAGGGCCTGCAATGCCACCTGTGCAAGGGATTTGGAGGATGCTCTCGCCCGTCTAGCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057932.8
CDS CAA 90 bp GAGCTCCATGGGCAGCTAGACGGGCGAGAGCATCCTCCAAATCCCTaGCACAGGTGGCATTGCAGGCCCTGTGTTACAGCTAGCTCCATG +
Preference number: 6 (lower is better)
Translates to: ELHGQLDGREHPPNP*HRWHCRPCVTASSM
Trigger: CATGGAGCTAGCTGTAACACAGGGCCTGCAATGCCACCTGTGCAAGGGATTTGGAGGATGCTCTCGCCCGTCTAGCTGCCCATGGAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057932.8
CDS GCA 72 bp GGTGGCATTGCAGGCCCTGTGTTACAGCTAGCTCCATaGTCAAGACCACGGCCAGAAGGAACCAGAAGGGAA +
Preference number: 6 (lower is better)
Translates to: GGIAGPVLQLAP*SRPRPEGTRRE
Trigger: TTCCCTTCTGGTTCCTTCTGGCCGTGGTCTTGAGCATGGAGCTAGCTGTAACACAGGGCCTGCAATGCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057932.8
CDS GCA 72 bp CGAGAGCATCCTCCAAATCCCTTGCACAGGTGGCATTaGAGGCCCTGTGTTACAGCTAGCTCCATGCTCAAG +
Preference number: 6 (lower is better)
Translates to: REHPPNPLHRWH*RPCVTASSMLK
Trigger: CTTGAGCATGGAGCTAGCTGTAACACAGGGCCTGCAATGCCACCTGTGCAAGGGATTTGGAGGATGCTCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057932.8
CDS CCA 72 bp AGCAGGCGATGGATACATGAGGACCTAAGCCCAAGCTaGAGACATCAGGACAGCCACTGTAGCACATCTTCG +
Preference number: 6 (lower is better)
Translates to: SRRWIHEDLSPS*RHQDSHCSTSS
Trigger: CGAAGATGTGCTACAGTGGCTGTCCTGATGTCTCCAGCTTGGGCTTAGGTCCTCATGTATCCATCGCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057932.8
CDS CCA 72 bp AGTCCCTGTTGCAGAGATTGGACTGGCAGCAGGCGATaGATACATGAGGACCTAAGCCCAAGCTGGAGACAT +
Preference number: 6 (lower is better)
Translates to: SPCCRDWTGSRR*IHEDLSPSWRH
Trigger: ATGTCTCCAGCTTGGGCTTAGGTCCTCATGTATCCATCGCCTGCTGCCAGTCCAATCTCTGCAACAGGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057932.8