Pregenerated sensors for SLURP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022596Ensembl transcript IDs: ENSMUST00000023261.4, ENSMUST00000190433.2
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCAGCTGGAGAGTCGGCCCCTGAGTGTGCTGTTCGATCCACCCTCTaGCTTCAGCCCTGGCCACTACCCTGGGAAGCAGTACGAGTCCAG | + |
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Preference number: 1 (lower is better) Translates to: PAGESAPECAVRSTL*LQPWPLPWEAVRVQ Trigger: CTGGACTCGTACTGCTTCCCAGGGTAGTGGCCAGGGCTGAAGGCAGAGGGTGGATCGAACAGCACACTCAGGGGCCGACTCTCCAGCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR CCA 90 bp | CCAAGAGTGAGCAGCTGGCTAGAGCCCCAGCTGGCCTTCCTACCATaGTCCCCCTCCTTGTCCACCCGCCACCTGGAGCCTATGAACCTT | + |
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Preference number: 1 (lower is better) Translates to: PRVSSWLEPQLAFLP*SPSLSTRHLEPMNL Trigger: AAGGTTCATAGGCTCCAGGTGGCGGGTGGACAAGGAGGGGGACCATGGTAGGAAGGCCAGCTGGGGCTCTAGCCAGCTGCTCACTCTTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR TCA 90 bp | TCCTACCATGGTCCCCCTCCTTGTCCACCCGCCACCTGGAGCCTATaGACCTTGCCACCCAAGTCACGTGCACCTGGCCTGTCTTTTCTG | + |
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Preference number: 1 (lower is better) Translates to: SYHGPPPCPPATWSL*TLPPKSRAPGLSFL Trigger: CAGAAAAGACAGGCCAGGTGCACGTGACTTGGGTGGCAAGGTTCATAGGCTCCAGGTGGCGGGTGGACAAGGAGGGGGACCATGGTAGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR CCA 90 bp | CGCCACCTGGAGCCTATGAACCTTGCCACCCAAGTCACGTGCACCTaGCCTGTCTTTTCTGTTGCCTTCCTTAGAGTCCCAGGAGGGCCC | + |
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Preference number: 1 (lower is better) Translates to: RHLEPMNLATQVTCT*PVFSVAFLRVPGGP Trigger: GGGCCCTCCTGGGACTCTAAGGAAGGCAACAGAAAAGACAGGCCAGGTGCACGTGACTTGGGTGGCAAGGTTCATAGGCTCCAGGTGGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR CCA 90 bp | AACTACACTGGGAAAGGGAAACAGTGGCCAAAGGGCAAAGGCTCCTaGGTCCTGAAAAGCTTGAGCTCCCAGCTGGAGAGTCGGCCCCTG | + |
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Preference number: 1 (lower is better) Translates to: NYTGKGKQWPKGKGS*VLKSLSSQLESRPL Trigger: CAGGGGCCGACTCTCCAGCTGGGAGCTCAAGCTTTTCAGGACCCAGGAGCCTTTGCCCTTTGGCCACTGTTTCCCTTTCCCAGTGTAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR CCA 90 bp | CCCTTGCAGTCTGTTGGGCAACCCGCTAGCAATCCTGATTGCCAGTaGGACTCAGGGCCATGGCCTCCTAACTGGGAGAATCCAGGAAGT | + |
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Preference number: 1 (lower is better) Translates to: PLQSVGQPASNPDCQ*DSGPWPPNWENPGS Trigger: ACTTCCTGGATTCTCCCAGTTAGGAGGCCATGGCCCTGAGTCCCACTGGCAATCAGGATTGCTAGCGGGTTGCCCAACAGACTGCAAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR TCA 90 bp | GGGACCTTTGAGTATAGAATTGGCCCTAGATGTGGTCCTAGCTGGTaGGGCTTAGAGGGCCAGGTTGGCAGCACAGGGGGTTGTGGGGAA | + |
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Preference number: 1 (lower is better) Translates to: GTFEYRIGPRCGPSW*GLEGQVGSTGGCGE Trigger: TTCCCCACAACCCCCTGTGCTGCCAACCTGGCCCTCTAAGCCTCACCAGCTAGGACCACATCTAGGGCCAATTCTATACTCAAAGGTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR CCA 90 bp | TGTGCTGTTCGATCCACCCTCTGCCTTCAGCCCTGGCCACTACCCTaGGAAGCAGTACGAGTCCAGCATGGCATTGGGTCTGTAGATAAG | + |
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Preference number: 1 (lower is better) Translates to: CAVRSTLCLQPWPLP*EAVRVQHGIGSVDK Trigger: CTTATCTACAGACCCAATGCCATGCTGGACTCGTACTGCTTCCCAGGGTAGTGGCCAGGGCTGAAGGCAGAGGGTGGATCGAACAGCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR CCA 90 bp | TGGACTTTGTGTATCTCCCTCTGTTGTATTCCTAGCAGGTCTGGATaGACCACCCAGTCACAGAAGCAGTTGGATTTAGGTTTCATGGGG | + |
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Preference number: 1 (lower is better) Translates to: WTLCISLCCIPSRSG*TTQSQKQLDLGFMG Trigger: CCCCATGAAACCTAAATCCAACTGCTTCTGTGACTGGGTGGTCCATCCAGACCTGCTAGGAATACAACAGAGGGAGATACACAAAGTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR CAA 90 bp | AGCTGGCTAGAGCCCCAGCTGGCCTTCCTACCATGGTCCCCCTCCTaGTCCACCCGCCACCTGGAGCCTATGAACCTTGCCACCCAAGTC | + |
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Preference number: 2 (lower is better) Translates to: SWLEPQLAFLPWSPS*STRHLEPMNLATQV Trigger: GACTTGGGTGGCAAGGTTCATAGGCTCCAGGTGGCGGGTGGACAAGGAGGGGGACCATGGTAGGAAGGCCAGCTGGGGCTCTAGCCAGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTCCTTTTCGCAGCCCTGCCACCCCGGCACAGACCGACCAGCTCCCTGGATGTTAAGGCCCCACAGCTaGCACACACCTCACAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: FSFSQPCHPGTDRPAPWMLRPHS*HTPHRG Trigger: CCCTCTGTGAGGTGTGTGGCAGCTGTGGGGCCTTAA...CATCCAGGGAGCTGGTCGGTCTGTGCCGGGGTGGCAGGGCTGCGAAAAGGAGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTCCTTTTCGCAGCCCTGCCACCCCGGCACAGACCGACCAGCTCCCTGGATGTCATGGGGAGAATGCTaGGGAAGGGTTTCCGGGGCT | + |
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Preference number: 2 (lower is better) Translates to: FSFSQPCHPGTDRPAPWMSWGEC*GRVSGA Trigger: AGCCCCGGAAACCCTTCCCCAGCATTCTCCCCATGA...CATCCAGGGAGCTGGTCGGTCTGTGCCGGGGTGGCAGGGCTGCGAAAAGGAGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTCCTTTTCGCAGCCCTGCCACCCCGGCACAGACCGACCAGCTCCCTGGATGAGGGCCCTAGGAAAGTaGGGTTCAGGCAACATGGGG | + |
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Preference number: 2 (lower is better) Translates to: FSFSQPCHPGTDRPAPWMRALGK*GSGNMG Trigger: CCCCATGTTGCCTGAACCCCACTTTCCTAGGGCCCT...CATCCAGGGAGCTGGTCGGTCTGTGCCGGGGTGGCAGGGCTGCGAAAAGGAGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR-3UTR GCA 90 bp | ATGAGTCATGGGATTGAGGCCAAGAGTGAGCAGCTGGCTAGAGCCCCAGCTGGCAAGCCACAGCTCTCCTaGCTCCCCATGGACTCGGGC | + |
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Preference number: 2 (lower is better) Translates to: MSHGIEAKSEQLARAPAGKPQLS*LPMDSG Trigger: GCCCGAGTCCATGGGGAGGCAGGAGAGCTGTGGCTT...GCCAGCTGGGGCTCTAGCCAGCTGCTCACTCTTGGCCTCAATCCCATGACTCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR CAA 90 bp | CGGTTCTCTGTTGGCACTGGGGACCAGGTAGCTGAGCCTTGCTTATaGCTCTTATGGGCCAGCCCCTCAGGTGCCAAGCCACAGCTCTCC | + |
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Preference number: 2 (lower is better) Translates to: RFSVGTGDQVAEPCL*LLWASPSGAKPQLS Trigger: GGAGAGCTGTGGCTTGGCACCTGAGGGGCTGGCCCATAAGAGCAATAAGCAAGGCTCAGCTACCTGGTCCCCAGTGCCAACAGAGAACCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR-3UTR TCA 90 bp | GGCACAGACCGACCAGCTCCCTGGATGTGTCTTCTGGAGGAACATGGATTGACAAGTGTGCAGGAAGGGTaGCCCAGGGGGCCTTGCTCC | + |
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Preference number: 2 (lower is better) Translates to: GTDRPAPWMCLLEEHGLTSVQEG*PRGPCS Trigger: GGAGCAAGGCCCCCTGGGTCACCCTTCCTGCACACT...TGTCAATCCATGTTCCTCCAGAAGACACATCCAGGGAGCTGGTCGGTCTGTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR-3UTR GCA 90 bp | AAGAGTGAGCAGCTGGCTAGAGCCCCAGCTGGCCTTCCTACCATGGTCCCCCTCGTTGTGGGGAAGAGGTaGTTCACACACCTCTCAGGG | + |
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Preference number: 2 (lower is better) Translates to: KSEQLARAPAGLPTMVPLVVGKR*FTHLSG Trigger: CCCTGAGAGGTGTGTGAAGCACCTCTTCCCCACAAC...GAGGGGGACCATGGTAGGAAGGCCAGCTGGGGCTCTAGCCAGCTGCTCACTCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR-3UTR GCA 90 bp | AAGAGTGAGCAGCTGGCTAGAGCCCCAGCTGGCCTTCCTACCATGGTCCCCCTCCCTGTCCCATACCTCTaGCCTTCCTACCTCCTACCT | + |
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Preference number: 2 (lower is better) Translates to: KSEQLARAPAGLPTMVPLPVPYL*PSYLLP Trigger: AGGTAGGAGGTAGGAAGGGCAGAGGTATGGGACAGG...GAGGGGGACCATGGTAGGAAGGCCAGCTGGGGCTCTAGCCAGCTGCTCACTCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR-3UTR GCA 90 bp | CCACCCCGGCACAGACCGACCAGCTCCCTGGATGTGTCTTCTGGAGGAACATGGGCCACCCAAGTCACGTaGACCTGGCCTGTCTTTTCT | + |
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Preference number: 2 (lower is better) Translates to: PPRHRPTSSLDVSSGGTWATQVT*TWPVFS Trigger: AGAAAAGACAGGCCAGGTGCACGTGACTTGGGTGGC...CCATGTTCCTCCAGAAGACACATCCAGGGAGCTGGTCGGTCTGTGCCGGGGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR CAA 90 bp | GGGAAACAGTGGCCAAAGGGCAAAGGCTCCTGGGTCCTGAAAAGCTaGAGCTCCCAGCTGGAGAGTCGGCCCCTGAGTGTGCTGTTCGAT | + |
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Preference number: 2 (lower is better) Translates to: GKQWPKGKGSWVLKS*SSQLESRPLSVLFD Trigger: ATCGAACAGCACACTCAGGGGCCGACTCTCCAGCTGGGAGCTCAAGCTTTTCAGGACCCAGGAGCCTTTGCCCTTTGGCCACTGTTTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGCTGGAGAGTCGGCCCCTGAGTGTGCTGTTCGATCCACCCTCTGCCTTCAGTTTCCACAAGCTTGGTaGACAGTGAGTGACCTGAGG | + |
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Preference number: 2 (lower is better) Translates to: PAGESAPECAVRSTLCLQFPQAW*TVSDLR Trigger: CCTCAGGTCACTCACTGTCCACCAAGCTTGTGGAAA...CTGAAGGCAGAGGGTGGATCGAACAGCACACTCAGGGGCCGACTCTCCAGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR-3UTR TCA 90 bp | GGCACAGACCGACCAGCTCCCTGGATGTGTCTTCTGGAGGAACATGGATTGACAGCTTCTGGGTCTGACTaGGCATCTGCCTCCAGACCT | + |
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Preference number: 2 (lower is better) Translates to: GTDRPAPWMCLLEEHGLTASGSD*ASASRP Trigger: AGGTCTGGAGGCAGATGCTCAGTCAGACCCAGAAGC...TGTCAATCCATGTTCCTCCAGAAGACACATCCAGGGAGCTGGTCGGTCTGTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR-3UTR GCA 90 bp | GGGAATGGCCCCGAGAGGGGACCTTTGAGTATAGAATTGGCCCTAGATGTGGTCGTTCGATCCACCCTCTaGCTTCAGCCCTGGCCACTA | + |
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Preference number: 2 (lower is better) Translates to: GNGPERGPLSIELALDVVVRSTL*LQPWPL Trigger: TAGTGGCCAGGGCTGAAGGCAGAGGGTGGATCGAAC...GACCACATCTAGGGCCAATTCTATACTCAAAGGTCCCCTCTCGGGGCCATTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR-3UTR CCA 90 bp | GGGAATGGCCCCGAGAGGGGACCTTTGAGTATAGAATTGGCCCTAGATGTGGTCGCGGGGAAACTACACTaGGAAAGGGAAACAGTGGCC | + |
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Preference number: 2 (lower is better) Translates to: GNGPERGPLSIELALDVVAGKLH*ERETVA Trigger: GGCCACTGTTTCCCTTTCCCAGTGTAGTTTCCCCGC...GACCACATCTAGGGCCAATTCTATACTCAAAGGTCCCCTCTCGGGGCCATTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR-3UTR TCA 90 bp | CACTTAGGGCTAAGCCTGATGAGTCATGGGATTGAGGCCAAGAGTGAGCAGCTGCCACCTCTTTGTCTCTaGAGAGGCCGGAGACAGTAC | + |
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Preference number: 2 (lower is better) Translates to: HLGLSLMSHGIEAKSEQLPPLCL*RGRRQY Trigger: GTACTGTCTCCGGCCTCTTCAGAGACAAAGAGGTGG...CAGCTGCTCACTCTTGGCCTCAATCCCATGACTCATCAGGCTTAGCCCTAAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR-3UTR GCA 90 bp | AGGCTAGAAATGGGCAGTATTAAAGGGCCAGGGGTAATCTGGAGGGTGGGGGTCGATCCTGAGGTATCCTaGACCATCCTTGTCACTCCC | + |
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Preference number: 2 (lower is better) Translates to: RLEMGSIKGPGVIWRVGVDPEVS*TILVTP Trigger: GGGAGTGACAAGGATGGTGCAGGATACCTCAGGATC...GACCCCCACCCTCCAGATTACCCCTGGCCCTTTAATACTGCCCATTTCTAGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR-3UTR GCA 90 bp | GCCCTTCCTACCTCCTACCTAACCCTTGCCCTAAACCATAGGCACATGGGTAGGATAGCAGGTGTTGAGTaGTGCCAGACAGTCCCACTG | + |
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Preference number: 2 (lower is better) Translates to: ALPTSYLTLALNHRHMGRIAGVE*CQTVPL Trigger: CAGTGGGACTGTCTGGCAGCACTCAACACCTGCTAT...CCTACCCATGTGCCTATGGTTTAGGGCAAGGGTTAGGTAGGAGGTAGGAAGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR-3UTR CCA 90 bp | CACTTAGGGCTAAGCCTGATGAGTCATGGGATTGAGGCCAAGAGTGAGCAGCTGCCTAGCAGGTCTGGATaGACCACCCAGTCACAGAAG | + |
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Preference number: 2 (lower is better) Translates to: HLGLSLMSHGIEAKSEQLPSRSG*TTQSQK Trigger: CTTCTGTGACTGGGTGGTCCATCCAGACCTGCTAGG...CAGCTGCTCACTCTTGGCCTCAATCCCATGACTCATCAGGCTTAGCCCTAAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR CAA 90 bp | AATAATCTAGATGTGTACGTAAGGTCAACCACGGGGCAAGGGCTTTaGCGGTTCTCTGTTGGCACTGGGGACCAGGTAGCTGAGCCTTGC | + |
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Preference number: 2 (lower is better) Translates to: NNLDVYVRSTTGQGL*RFSVGTGDQVAEPC Trigger: GCAAGGCTCAGCTACCTGGTCCCCAGTGCCAACAGAGAACCGCAAAAGCCCTTGCCCCGTGGTTGACCTTACGTACACATCTAGATTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR CAA 90 bp | TGTATTCCTAGCAGGTCTGGATGGACCACCCAGTCACAGAAGCAGTaGGATTTAGGTTTCATGGGGAGAATGCTGGGGAAGGGTTTCCGG | + |
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Preference number: 2 (lower is better) Translates to: CIPSRSGWTTQSQKQ*DLGFMGRMLGKGFR Trigger: CCGGAAACCCTTCCCCAGCATTCTCCCCATGAAACCTAAATCCAACTGCTTCTGTGACTGGGTGGTCCATCCAGACCTGCTAGGAATACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGGGGCCTGGAAGTGCCAGAATACAGCCTGTCTTCCCTGCAGGCTAGCACTTTATTTTCCACAAGCTTaGTGGACAGTGAGTGACCTG | + |
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Preference number: 2 (lower is better) Translates to: SGAWKCQNTACLPCRLALYFPQA*WTVSDL Trigger: CAGGTCACTCACTGTCCACCAAGCTTGTGGAAAATA...AAGTGCTAGCCTGCAGGGAAGACAGGCTGTATTCTGGCACTTCCAGGCCCCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR-3UTR CCA 90 bp | GCCTCTTGCCTCCAAATCCTGAGTTCAACGAGGCTCTCTGAAATTCACAGTGCAGAGGGAAGAACACTGTaGAAGGGACAGCGGGGAAAC | + |
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Preference number: 2 (lower is better) Translates to: ASCLQILSSTRLSEIHSAEGRTL*KGQRGN Trigger: GTTTCCCCGCTGTCCCTTCCACAGTGTTCTTCCCTC...TGCACTGTGAATTTCAGAGAGCCTCGTTGAACTCAGGATTTGGAGGCAAGAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR-3UTR TCA 90 bp | GCCTCTTGCCTCCAAATCCTGAGTTCAACGAGGCTCTCTGAAATTCACAGTGCAGGCCACAGTCTCATTTaGTTCCTCAGCTGTCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: ASCLQILSSTRLSEIHSAGHSLI*FLSCLR Trigger: CCTGAGACAGCTGAGGAATCAAATGAGACTGTGGCC...TGCACTGTGAATTTCAGAGAGCCTCGTTGAACTCAGGATTTGGAGGCAAGAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR-3UTR CCA 90 bp | GCCTCTTGCCTCCAAATCCTGAGTTCAACGAGGCTCTCTGAAATTCACAGTGCAAAGGGCAAAGGCTCCTaGGTCCTGAAAAGCTTGAGC | + |
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Preference number: 2 (lower is better) Translates to: ASCLQILSSTRLSEIHSAKGKGS*VLKSLS Trigger: GCTCAAGCTTTTCAGGACCCAGGAGCCTTTGCCCTT...TGCACTGTGAATTTCAGAGAGCCTCGTTGAACTCAGGATTTGGAGGCAAGAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR-3UTR CCA 90 bp | GCCTCTTGCCTCCAAATCCTGAGTTCAACGAGGCTCTCTGAAATTCACAGTGCAAAGAGGGGCGGTGTGTaGCAGATTTGTAGAGATGGA | + |
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Preference number: 2 (lower is better) Translates to: ASCLQILSSTRLSEIHSAKRGGV*QICRDG Trigger: TCCATCTCTACAAATCTGCCACACACCGCCCCTCTT...TGCACTGTGAATTTCAGAGAGCCTCGTTGAACTCAGGATTTGGAGGCAAGAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR CCA 72 bp | AGCAGCTGGCTAGAGCCCCAGCTGGCCTTCCTACCATaGTCCCCCTCCTTGTCCACCCGCCACCTGGAGCCT | + |
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Preference number: 3 (lower is better) Translates to: SSWLEPQLAFLP*SPSLSTRHLEP Trigger: AGGCTCCAGGTGGCGGGTGGACAAGGAGGGGGACCATGGTAGGAAGGCCAGCTGGGGCTCTAGCCAGCTGCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR TCA 72 bp | GGTCCCCCTCCTTGTCCACCCGCCACCTGGAGCCTATaGACCTTGCCACCCAAGTCACGTGCACCTGGCCTG | + |
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Preference number: 3 (lower is better) Translates to: GPPPCPPATWSL*TLPPKSRAPGL Trigger: CAGGCCAGGTGCACGTGACTTGGGTGGCAAGGTTCATAGGCTCCAGGTGGCGGGTGGACAAGGAGGGGGACC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR-3UTR CAA 90 bp | AGTTCTCAAGGCGCGTGTGCCGGGGAGGTTCTCCTTTTCGCAGCCCTGCCACCCGTGACCCAGGGGGCCTaGCTCCCTCTAGGTTTCTGT | + |
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Preference number: 3 (lower is better) Translates to: SSQGACAGEVLLFAALPPVTQGA*LPLGFC Trigger: ACAGAAACCTAGAGGGAGCAAGGCCCCCTGGGTCAC...GGGTGGCAGGGCTGCGAAAAGGAGAACCTCCCCGGCACACGCGCCTTGAGAACT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR GCA 72 bp | GAGTCGGCCCCTGAGTGTGCTGTTCGATCCACCCTCTaGCTTCAGCCCTGGCCACTACCCTGGGAAGCAGTA | + |
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Preference number: 3 (lower is better) Translates to: ESAPECAVRSTL*LQPWPLPWEAV Trigger: TACTGCTTCCCAGGGTAGTGGCCAGGGCTGAAGGCAGAGGGTGGATCGAACAGCACACTCAGGGGCCGACTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR GCA 72 bp | GCCTTGCTTATTGCTCTTATGGGCCAGCCCCTCAGGTaGCAAGCCACAGCTCTCCTGCCTCCCCATGGACTC | + |
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Preference number: 3 (lower is better) Translates to: ALLIALMGQPLR*QATALLPPHGL Trigger: GAGTCCATGGGGAGGCAGGAGAGCTGTGGCTTGGCACCTGAGGGGCTGGCCCATAAGAGCAATAAGCAAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR CCA 72 bp | CGATCCACCCTCTGCCTTCAGCCCTGGCCACTACCCTaGGAAGCAGTACGAGTCCAGCATGGCATTGGGTCT | + |
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Preference number: 3 (lower is better) Translates to: RSTLCLQPWPLP*EAVRVQHGIGS Trigger: AGACCCAATGCCATGCTGGACTCGTACTGCTTCCCAGGGTAGTGGCCAGGGCTGAAGGCAGAGGGTGGATCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR-3UTR CAA 90 bp | AAGAGTGAGCAGCTGGCTAGAGCCCCAGCTGGCCTTCCTACCATGGTCCCCCTCAGTAGCCCTGGCCTCTaGCCTCCAAATCCTGAGTTC | + |
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Preference number: 3 (lower is better) Translates to: KSEQLARAPAGLPTMVPLSSPGL*PPNPEF Trigger: GAACTCAGGATTTGGAGGCAAGAGGCCAGGGCTACT...GAGGGGGACCATGGTAGGAAGGCCAGCTGGGGCTCTAGCCAGCTGCTCACTCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR GCA 72 bp | GCCAGGTTGGCAGCACAGGGGGTTGTGGGGAAGAGGTaGTTCACACACCTCTCAGGGATCCTGAGGTATCCT | + |
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Preference number: 3 (lower is better) Translates to: ARLAAQGVVGKR*FTHLSGILRYP Trigger: AGGATACCTCAGGATCCCTGAGAGGTGTGTGAAGCACCTCTTCCCCACAACCCCCTGTGCTGCCAACCTGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR CCA 72 bp | GAGTGTGCTGTTCGATCCACCCTCTGCCTTCAGCCCTaGCCACTACCCTGGGAAGCAGTACGAGTCCAGCAT | + |
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Preference number: 3 (lower is better) Translates to: ECAVRSTLCLQP*PLPWEAVRVQH Trigger: ATGCTGGACTCGTACTGCTTCCCAGGGTAGTGGCCAGGGCTGAAGGCAGAGGGTGGATCGAACAGCACACTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR CCA 72 bp | TCTCCTGCCTCCCCATGGACTCGGGCCAGGCGTGACTaGGTTCTCACTGAGTCCCACCTCTTTGTCTCTGAA | + |
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Preference number: 3 (lower is better) Translates to: SPASPWTRARRD*VLTESHLFVSE Trigger: TTCAGAGACAAAGAGGTGGGACTCAGTGAGAACCCAGTCACGCCTGGCCCGAGTCCATGGGGAGGCAGGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR-3UTR CAA 90 bp | TTCTCCTTTTCGCAGCCCTGCCACCCCGGCACAGACCGACCAGCTCCCTGGATGCAGTCACAGAAGCAGTaGGATTTAGGTTTCATGGGG | + |
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Preference number: 3 (lower is better) Translates to: FSFSQPCHPGTDRPAPWMQSQKQ*DLGFMG Trigger: CCCCATGAAACCTAAATCCAACTGCTTCTGTGACTG...CATCCAGGGAGCTGGTCGGTCTGTGCCGGGGTGGCAGGGCTGCGAAAAGGAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR TCA 72 bp | AAGTGGTGGGAGCAAGGTGGAGCTTCTGGGTCTGACTaGGCATCTGCCTCCAGACCTGGAGGAGTACACTGC | + |
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Preference number: 3 (lower is better) Translates to: KWWEQGGASGSD*ASASRPGGVHC Trigger: GCAGTGTACTCCTCCAGGTCTGGAGGCAGATGCTCAGTCAGACCCAGAAGCTCCACCTTGCTCCCACCACTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR GCA 72 bp | TTCTCTGTTGGCACTGGGGACCAGGTAGCTGAGCCTTaGTTATTGCTCTTATGGGCCAGCCCCTCAGGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: FSVGTGDQVAEP*LLLLWASPSGA Trigger: GGCACCTGAGGGGCTGGCCCATAAGAGCAATAAGCAAGGCTCAGCTACCTGGTCCCCAGTGCCAACAGAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR CCA 72 bp | GGGGAATGGGCAGGCCATTGTAAGAGGGGCGGTGTGTaGCAGATTTGTAGAGATGGACACCCTAGGGCACCT | + |
|
Preference number: 3 (lower is better) Translates to: GEWAGHCKRGGV*QICRDGHPRAP Trigger: AGGTGCCCTAGGGTGTCCATCTCTACAAATCTGCCACACACCGCCCCTCTTACAATGGCCTGCCCATTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR-3UTR CAA 90 bp | GCCCTTCCTACCTCCTACCTAACCCTTGCCCTAAACCATAGGCACATGGGTAGGCTGAGTCCCACCTCTTaGTCTCTGAAGAGGCCGGAG | + |
|
Preference number: 3 (lower is better) Translates to: ALPTSYLTLALNHRHMGRLSPTS*SLKRPE Trigger: CTCCGGCCTCTTCAGAGACAAAGAGGTGGGACTCAG...CCTACCCATGTGCCTATGGTTTAGGGCAAGGGTTAGGTAGGAGGTAGGAAGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR TCA 72 bp | GAGTATAGAATTGGCCCTAGATGTGGTCCTAGCTGGTaGGGCTTAGAGGGCCAGGTTGGCAGCACAGGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: EYRIGPRCGPSW*GLEGQVGSTGG Trigger: ACCCCCTGTGCTGCCAACCTGGCCCTCTAAGCCTCACCAGCTAGGACCACATCTAGGGCCAATTCTATACTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR TCA 72 bp | TTTGCGGTTCTCTGTTGGCACTGGGGACCAGGTAGCTaGGCCTTGCTTATTGCTCTTATGGGCCAGCCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: FAVLCWHWGPGS*ALLIALMGQPL Trigger: GAGGGGCTGGCCCATAAGAGCAATAAGCAAGGCTCAGCTACCTGGTCCCCAGTGCCAACAGAGAACCGCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR TCA 72 bp | CAGCTCCCTGGATGTGTCTTCTGGAGGAACATGGATTaGCATAGTGTGCCCAGGCTTGTGGGCGCCTCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: QLPGCVFWRNMD*HSVPRLVGASA Trigger: TGCAGAGGCGCCCACAAGCCTGGGCACACTATGTCAATCCATGTTCCTCCAGAAGACACATCCAGGGAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR CCA 72 bp | CTAGAAATGGGCAGTATTAAAGGGCCAGGGGTAATCTaGAGGGTGGGGGTCCTTAGGAGGCTTGGGTGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: LEMGSIKGPGVI*RVGVLRRLGWL Trigger: GAGCCACCCAAGCCTCCTAAGGACCCCCACCCTCCAGATTACCCCTGGCCCTTTAATACTGCCCATTTCTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR-3UTR CAA 90 bp | GCCCTTCCTACCTCCTACCTAACCCTTGCCCTAAACCATAGGCACATGGGTAGGGGAACCTGCCATGGATaGAGATGGGCTAGTGTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: ALPTSYLTLALNHRHMGRGTCHG*RWASVQ Trigger: CTGCACACTAGCCCATCTCAATCCATGGCAGGTTCC...CCTACCCATGTGCCTATGGTTTAGGGCAAGGGTTAGGTAGGAGGTAGGAAGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR TCA 72 bp | CTCTTGCCTCCAAATCCTGAGTTCAACGAGGCTCTCTaGAATTCACAGTGCAGGGGAATGGCCCCGAGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: LLPPNPEFNEAL*NSQCRGMAPRG Trigger: CCCTCTCGGGGCCATTCCCCTGCACTGTGAATTTCAGAGAGCCTCGTTGAACTCAGGATTTGGAGGCAAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR GCA 72 bp | AGGAGGCTTGGGTGGCTCATAGCAGGTGTTGAGTGCTaGCAGACAGTCCCACTGGGACTCCAGATAGAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: RRLGWLIAGVEC*QTVPLGLQIES Trigger: ACTTTCTATCTGGAGTCCCAGTGGGACTGTCTGGCAGCACTCAACACCTGCTATGAGCCACCCAAGCCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
||
| 3UTR GCA 72 bp | CACCTGGAGCCTATGAACCTTGCCACCCAAGTCACGTaGACCTGGCCTGTCTTTTCTGTTGCCTTCCTTAGA | + |
|
Preference number: 3 (lower is better) Translates to: HLEPMNLATQVT*TWPVFSVAFLR Trigger: TCTAAGGAAGGCAACAGAAAAGACAGGCCAGGTGCACGTGACTTGGGTGGCAAGGTTCATAGGCTCCAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR CCA 72 bp | GAGCCTATGAACCTTGCCACCCAAGTCACGTGCACCTaGCCTGTCTTTTCTGTTGCCTTCCTTAGAGTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: EPMNLATQVTCT*PVFSVAFLRVP Trigger: TGGGACTCTAAGGAAGGCAACAGAAAAGACAGGCCAGGTGCACGTGACTTGGGTGGCAAGGTTCATAGGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR GCA 72 bp | AATAGTGTGCAGCTGGGAAGACCTGTCCCATACCTCTaGCCTTCCTACCTCCTACCTAACCCTTGCCCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: NSVQLGRPVPYL*PSYLLPNPCPK Trigger: TTTAGGGCAAGGGTTAGGTAGGAGGTAGGAAGGGCAGAGGTATGGGACAGGTCTTCCCAGCTGCACACTATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| CDS-3UTR GCA 90 bp | AGATCCAGGCATGTAGAGACGACTGCAGGCAGCACCGGGCCCTGCCGGGAGAGTGCCCATGCTCCAGGCTaGCAAGAGCAGCAGCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: RSRHVETTAGSTGPCRESAHAPG*QEQQPH Trigger: ATGTGGCTGCTGCTCTTGGCAGCCTGGAGCATGGGC...ACTCTCCCGGCAGGGCCCGGTGCTGCCTGCAGTCGTCTCTACATGCCTGGATCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023261.4 ENSMUST00000190433.2 |
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| CDS-3UTR CCA 90 bp | CCAGCTGGAGAGTCGGCCCCTGAGTGTGCTGTTCGATCCACCCTCTGCCTTCAGTGGCCAGACACGAGCTaGAGCAGGAGCGGGTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: PAGESAPECAVRSTLCLQWPDTS*SRSGSP Trigger: TGGTGACCCGCTCCTGCTCCAGCTCGTGTCTGGCCA...CTGAAGGCAGAGGGTGGATCGAACAGCACACTCAGGGGCCGACTCTCCAGCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| CDS-3UTR GCA 90 bp | TCCAGGCATGTAGAGACGACTGCAGGCAGCACCGGGCCCTGCCGGGAGAGTGGAGTTGAAGGGGAACGCTaGTTCCACTGTCTCCAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SRHVETTAGSTGPCRESGVEGER*FHCLQY Trigger: GTACTGGAGACAGTGGAAGCAGCGTTCCCCTTCAAC...TCCACTCTCCCGGCAGGGCCCGGTGCTGCCTGCAGTCGTCTCTACATGCCTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023261.4 ENSMUST00000190433.2 |
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| 3UTR CAA 72 bp | GTGAGGCTTAGAGGGCCAGGTTGGCAGCACAGGGGGTaGTGGGGAAGAGGTGCTTCACACACCTCTCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VRLRGPGWQHRG*WGRGASHTSQG Trigger: TCCCTGAGAGGTGTGTGAAGCACCTCTTCCCCACAACCCCCTGTGCTGCCAACCTGGCCCTCTAAGCCTCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR CAA 72 bp | GTTGGCACTGGGGACCAGGTAGCTGAGCCTTGCTTATaGCTCTTATGGGCCAGCCCCTCAGGTGCCAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VGTGDQVAEPCL*LLWASPSGAKP Trigger: TGGCTTGGCACCTGAGGGGCTGGCCCATAAGAGCAATAAGCAAGGCTCAGCTACCTGGTCCCCAGTGCCAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| CDS-3UTR TCA 90 bp | TGGGCAACGCCAATGCCATCAGGGTCGGTGGCCAGACACGAGCTGGAGCAGGAGGATGTCCAAGACAAGTaGCAACACCACATCCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: WATPMPSGSVARHELEQEDVQDK*QHHILH Trigger: ATGCAGGATGTGGTGTTGTCACTTGTCTTGGACATC...CTCCTGCTCCAGCTCGTGTCTGGCCACCGACCCTGATGGCATTGGCGTTGCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023261.4 |
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| CDS-3UTR GCA 90 bp | AGCCTGGAAACCCTGAGTTGCAGAGGTCACGGAAGCAACAGAAGACAGGATGGGGCCCATGCTCCAGGCTaGCAAGAGCAGCAGCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: SLETLSCRGHGSNRRQDGAHAPG*QEQQPH Trigger: ATGTGGCTGCTGCTCTTGGCAGCCTGGAGCATGGGC...CCCATCCTGTCTTCTGTTGCTTCCGTGACCTCTGCAACTCAGGGTTTCCAGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023261.4 |
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| CDS-3UTR GCA 90 bp | AGGATGGGCAACGCCAATGCCATCAGGGTCGGTGGCCAGACACGAGCTGGAGCAGACAACACCACATCCTaGATCCGTATCTTCCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RMGNANAIRVGGQTRAGADNTTS*IRIFLP Trigger: TGGGAGGAAGATACGGATGCAGGATGTGGTGTTGTC...TGCTCCAGCTCGTGTCTGGCCACCGACCCTGATGGCATTGGCGTTGCCCATCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023261.4 |
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| CDS-3UTR GCA 90 bp | AGCAACAGAAGACAGGATGGGCAACGCCAATGCCATCAGGGTCGGTGGCCAGACGTTGAAGGGGAACGCTaGTTCCACTGTCTCCAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SNRRQDGQRQCHQGRWPDVEGER*FHCLQY Trigger: GTACTGGAGACAGTGGAAGCAGCGTTCCCCTTCAAC...GTCTGGCCACCGACCCTGATGGCATTGGCGTTGCCCATCCTGTCTTCTGTTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023261.4 |
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| CDS-3UTR GCA 90 bp | CTGTGGAAGGGACAGCGGGGAAACTACACTGGGAAAGGGAAACAGTGGCCAAAGCCTCACCATAGCCCATaGTCCAGGCTGCCAAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LWKGQRGNYTGKGKQWPKPHHSP*SRLPRA Trigger: TGCTCTTGGCAGCCTGGAGCATGGGCTATGGTGAGG...CTTTGGCCACTGTTTCCCTTTCCCAGTGTAGTTTCCCCGCTGTCCCTTCCACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR CAA 72 bp | GATGTGTACGTAAGGTCAACCACGGGGCAAGGGCTTTaGCGGTTCTCTGTTGGCACTGGGGACCAGGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: DVYVRSTTGQGL*RFSVGTGDQVA Trigger: AGCTACCTGGTCCCCAGTGCCAACAGAGAACCGCAAAAGCCCTTGCCCCGTGGTTGACCTTACGTACACATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| CDS-3UTR CCA 90 bp | TCAGGGGCCTGGAAGTGCCAGAATACAGCCTGTCTTCCCTGCAGGCTAGCACTTCAACAGAAGACAGGATaGGCAACGCCAATGCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: SGAWKCQNTACLPCRLALQQKTG*ATPMPS Trigger: TGATGGCATTGGCGTTGCCCATCCTGTCTTCTGTTG...AAGTGCTAGCCTGCAGGGAAGACAGGCTGTATTCTGGCACTTCCAGGCCCCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR CAA 72 bp | AGCAGGTCTGGATGGACCACCCAGTCACAGAAGCAGTaGGATTTAGGTTTCATGGGGAGAATGCTGGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SRSGWTTQSQKQ*DLGFMGRMLGK Trigger: CTTCCCCAGCATTCTCCCCATGAAACCTAAATCCAACTGCTTCTGTGACTGGGTGGTCCATCCAGACCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| 3UTR CAA 72 bp | GTCCAGCATGGCATTGGGTCTGTAGATAAGGGGACGTaGGCCACAGTCTCATTTGATTCCTCAGCTGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VQHGIGSVDKGT*ATVSFDSSAVS Trigger: TGAGACAGCTGAGGAATCAAATGAGACTGTGGCCAACGTCCCCTTATCTACAGACCCAATGCCATGCTGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| CDS CCA 90 bp | AGCAACAGAAGACAGGATGGGCAACGCCAATGCCATCAGGGTCGGTaGCCAGACACGAGCTGGAGCAGGAGCGGGTCACCATGGGACTGT | + |
|
Preference number: 5 (lower is better) Translates to: SNRRQDGQRQCHQGR*PDTSWSRSGSPWDC Trigger: ACAGTCCCATGGTGACCCGCTCCTGCTCCAGCTCGTGTCTGGCCACCGACCCTGATGGCATTGGCGTTGCCCATCCTGTCTTCTGTTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| CDS TCA 90 bp | CCAGACACGAGCTGGAGCAGGAGCGGGTCACCATGGGACTGTGGTTaGAGGGGAACGCTGCTTCCACTGTCTCCAGTACAGTCTTACAGG | + |
|
Preference number: 5 (lower is better) Translates to: PDTSWSRSGSPWDCG*RGTLLPLSPVQSYR Trigger: CCTGTAAGACTGTACTGGAGACAGTGGAAGCAGCGTTCCCCTTCAACCACAGTCCCATGGTGACCCGCTCCTGCTCCAGCTCGTGTCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| CDS CCA 90 bp | GTGGCCAGACACGAGCTGGAGCAGGAGCGGGTCACCATGGGACTGTaGTTGAAGGGGAACGCTGCTTCCACTGTCTCCAGTACAGTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: VARHELEQERVTMGL*LKGNAASTVSSTVL Trigger: TAAGACTGTACTGGAGACAGTGGAAGCAGCGTTCCCCTTCAACCACAGTCCCATGGTGACCCGCTCCTGCTCCAGCTCGTGTCTGGCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| CDS GCA 90 bp | GGAGCAGGAGCGGGTCACCATGGGACTGTGGTTGAAGGGGAACGCTaGTTCCACTGTCTCCAGTACAGTCTTACAGGCTGTGTCTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: GAGAGHHGTVVEGER*FHCLQYSLTGCVFH Trigger: ATGGAAGACACAGCCTGTAAGACTGTACTGGAGACAGTGGAAGCAGCGTTCCCCTTCAACCACAGTCCCATGGTGACCCGCTCCTGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| CDS-3UTR CAA 90 bp | CTGTGGAAGGGACAGCGGGGAAACTACACTGGGAAAGGGAAACAGTGGCCAAAGCCTGGAAACCCTGAGTaGCAGAGGTCACGGAAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: LWKGQRGNYTGKGKQWPKPGNPE*QRSRKQ Trigger: TTGCTTCCGTGACCTCTGCAACTCAGGGTTTCCAGG...CTTTGGCCACTGTTTCCCTTTCCCAGTGTAGTTTCCCCGCTGTCCCTTCCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| CDS CCA 72 bp | CACGAGCTGGAGCAGGAGCGGGTCACCATGGGACTGTaGTTGAAGGGGAACGCTGCTTCCACTGTCTCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: HELEQERVTMGL*LKGNAASTVSS Trigger: ACTGGAGACAGTGGAAGCAGCGTTCCCCTTCAACCACAGTCCCATGGTGACCCGCTCCTGCTCCAGCTCGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| CDS TCA 72 bp | AGCTGGAGCAGGAGCGGGTCACCATGGGACTGTGGTTaGAGGGGAACGCTGCTTCCACTGTCTCCAGTACAG | + |
|
Preference number: 6 (lower is better) Translates to: SWSRSGSPWDCG*RGTLLPLSPVQ Trigger: CTGTACTGGAGACAGTGGAAGCAGCGTTCCCCTTCAACCACAGTCCCATGGTGACCCGCTCCTGCTCCAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| CDS CAA 72 bp | GAGCTGGAGCAGGAGCGGGTCACCATGGGACTGTGGTaGAAGGGGAACGCTGCTTCCACTGTCTCCAGTACA | + |
|
Preference number: 6 (lower is better) Translates to: ELEQERVTMGLW*KGNAASTVSST Trigger: TGTACTGGAGACAGTGGAAGCAGCGTTCCCCTTCAACCACAGTCCCATGGTGACCCGCTCCTGCTCCAGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| CDS CAA 90 bp | GCCAGACACGAGCTGGAGCAGGAGCGGGTCACCATGGGACTGTGGTaGAAGGGGAACGCTGCTTCCACTGTCTCCAGTACAGTCTTACAG | + |
|
Preference number: 6 (lower is better) Translates to: ARHELEQERVTMGLW*KGNAASTVSSTVLQ Trigger: CTGTAAGACTGTACTGGAGACAGTGGAAGCAGCGTTCCCCTTCAACCACAGTCCCATGGTGACCCGCTCCTGCTCCAGCTCGTGTCTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| CDS GCA 72 bp | GCGGGTCACCATGGGACTGTGGTTGAAGGGGAACGCTaGTTCCACTGTCTCCAGTACAGTCTTACAGGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: AGHHGTVVEGER*FHCLQYSLTGC Trigger: ACAGCCTGTAAGACTGTACTGGAGACAGTGGAAGCAGCGTTCCCCTTCAACCACAGTCCCATGGTGACCCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190433.2 |
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| CDS TCA 72 bp | CTGAGAGTCTTCCGAGACCCAGATGTCCAAGACAAGTaGCAACACCACATCCTGCATCCGTATCTTCCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: LRVFRDPDVQDK*QHHILHPYLPP Trigger: GGGAGGAAGATACGGATGCAGGATGTGGTGTTGTCACTTGTCTTGGACATCTGGGTCTCGGAAGACTCTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023261.4 |
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