Pregenerated sensors for SLITRK6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045871Ensembl transcript IDs: ENSMUST00000078386.4
Found 144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAACAGTTATATGCAAGGACTTGTTTTATTTGGAACAGGCTATATTaGCTGATGATAATGCCATGGCTTCCTCAATTGTCCCTGAGTTTC | + |
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Preference number: 1 (lower is better) Translates to: QQLYARTCFIWNRLY*LMIMPWLPQLSLSF Trigger: GAAACTCAGGGACAATTGAGGAAGCCATGGCATTATCATCAGGCAATATAGCCTGTTCCAAATAAAACAAGTCCTTGCATATAACTGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| 3UTR CCA 90 bp | ACTACGTACTCCTTGCAACAGTTATATGCAAGGACTTGTTTTATTTaGAACAGGCTATATTGCCTGATGATAATGCCATGGCTTCCTCAA | + |
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Preference number: 1 (lower is better) Translates to: TTYSLQQLYARTCFI*NRLYCLMIMPWLPQ Trigger: TTGAGGAAGCCATGGCATTATCATCAGGCAATATAGCCTGTTCCAAATAAAACAAGTCCTTGCATATAACTGTTGCAAGGAGTACGTAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| 3UTR CCA 90 bp | ACTTGTTTTATTTGGAACAGGCTATATTGCCTGATGATAATGCCATaGCTTCCTCAATTGTCCCTGAGTTTCACTTTCTTCTTTCATCTC | + |
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Preference number: 1 (lower is better) Translates to: TCFIWNRLYCLMIMP*LPQLSLSFTFFFHL Trigger: GAGATGAAAGAAGAAAGTGAAACTCAGGGACAATTGAGGAAGCCATGGCATTATCATCAGGCAATATAGCCTGTTCCAAATAAAACAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| 3UTR CCA 90 bp | CCTTTAGGTGTGCAAGAGAAATTCTATGAAATACTTGTAAGCATATaGAGCAATACTACGTACTCCTTGCAACAGTTATATGCAAGGACT | + |
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Preference number: 1 (lower is better) Translates to: PLGVQEKFYEILVSI*SNTTYSLQQLYART Trigger: AGTCCTTGCATATAACTGTTGCAAGGAGTACGTAGTATTGCTCCATATGCTTACAAGTATTTCATAGAATTTCTCTTGCACACCTAAAGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| 3UTR-3UTR GCA 90 bp | TGCTTATTTATCCCACAGGAACTATTTGCCATCGTGAGTCTGAATTCAGAAACCGAATCCCAGCATTTCTaGAAAAGCCCACAAGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: CLFIPQELFAIVSLNSETESQHF*KSPQAA Trigger: GGCTGCTTGTGGGCTTTTGCAGAAATGCTGGGATTC...GGTTTCTGAATTCAGACTCACGATGGCAAATAGTTCCTGTGGGATAAATAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| 3UTR CAA 90 bp | GCAACAGTTATATGCAAGGACTTGTTTTATTTGGAACAGGCTATATaGCCTGATGATAATGCCATGGCTTCCTCAATTGTCCCTGAGTTT | + |
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Preference number: 2 (lower is better) Translates to: ATVICKDLFYLEQAI*PDDNAMASSIVPEF Trigger: AAACTCAGGGACAATTGAGGAAGCCATGGCATTATCATCAGGCAATATAGCCTGTTCCAAATAAAACAAGTCCTTGCATATAACTGTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| 3UTR CAA 90 bp | TACTACGTACTCCTTGCAACAGTTATATGCAAGGACTTGTTTTATTaGGAACAGGCTATATTGCCTGATGATAATGCCATGGCTTCCTCA | + |
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Preference number: 2 (lower is better) Translates to: YYVLLATVICKDLFY*EQAILPDDNAMASS Trigger: TGAGGAAGCCATGGCATTATCATCAGGCAATATAGCCTGTTCCAAATAAAACAAGTCCTTGCATATAACTGTTGCAAGGAGTACGTAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| 3UTR CAA 90 bp | ATGGAGCAATACTACGTACTCCTTGCAACAGTTATATGCAAGGACTaGTTTTATTTGGAACAGGCTATATTGCCTGATGATAATGCCATG | + |
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Preference number: 2 (lower is better) Translates to: MEQYYVLLATVICKD*FYLEQAILPDDNAM Trigger: CATGGCATTATCATCAGGCAATATAGCCTGTTCCAAATAAAACAAGTCCTTGCATATAACTGTTGCAAGGAGTACGTAGTATTGCTCCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| 3UTR-3UTR TCA 90 bp | AAAACTGGAGCTTTTTATGTGTTCAACCCTTTAGGTGTGCAAGAGAAATTCTATGGATTACGGCTGTGCTaGATTCTGATTGATAACACC | + |
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Preference number: 2 (lower is better) Translates to: KTGAFYVFNPLGVQEKFYGLRLC*ILIDNT Trigger: GGTGTTATCAATCAGAATTCAGCACAGCCGTAATCC...ATAGAATTTCTCTTGCACACCTAAAGGGTTGAACACATAAAAAGCTCCAGTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| 3UTR-3UTR CCA 90 bp | ATCGTGAGTCTGAATTCAGAAACCTTAGCAATGGCACCCTTTGTTGAAAATTCGAGGACTTGTTTTATTTaGAACAGGCTATATTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: IVSLNSETLAMAPFVENSRTCFI*NRLYCL Trigger: CAGGCAATATAGCCTGTTCCAAATAAAACAAGTCCT...CGAATTTTCAACAAAGGGTGCCATTGCTAAGGTTTCTGAATTCAGACTCACGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| 3UTR-3UTR TCA 90 bp | TACTACGTACTCCTTGCAACAGTTATATGCAAGGACTTGTTTTATTTGGAACAGTTCCTCAATTGTCCCTaGGTTTCACTTTCTTCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: YYVLLATVICKDLFYLEQFLNCP*VSLSSF Trigger: GAAAGAAGAAAGTGAAACTCAGGGACAATTGAGGAA...CTGTTCCAAATAAAACAAGTCCTTGCATATAACTGTTGCAAGGAGTACGTAGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| 3UTR-3UTR GCA 90 bp | CAAGAGAAATTCTATGAAATACTTGTAAGCATATGGAGCAATACTACGTACTCCTGGAACAGGCTATATTaGCTGATGATAATGCCATGG | + |
|
Preference number: 2 (lower is better) Translates to: QEKFYEILVSIWSNTTYSWNRLY*LMIMPW Trigger: CCATGGCATTATCATCAGGCAATATAGCCTGTTCCA...GGAGTACGTAGTATTGCTCCATATGCTTACAAGTATTTCATAGAATTTCTCTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| 3UTR-3UTR CCA 90 bp | AAAACTGGAGCTTTTTATGTGTTCAACCCTTTAGGTGTGCAAGAGAAATTCTATATACTTGTAAGCATATaGAGCAATACTACGTACTCC | + |
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Preference number: 2 (lower is better) Translates to: KTGAFYVFNPLGVQEKFYILVSI*SNTTYS Trigger: GGAGTACGTAGTATTGCTCCATATGCTTACAAGTAT...ATAGAATTTCTCTTGCACACCTAAAGGGTTGAACACATAAAAAGCTCCAGTTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| 3UTR TCA 72 bp | TTTCTTCTTTCATCTCTCATAGGATTACGGCTGTGCTaGATTCTGATTGATAACACCCACGTAAGGCACTTA | + |
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Preference number: 3 (lower is better) Translates to: FLLSSLIGLRLC*ILIDNTHVRHL Trigger: TAAGTGCCTTACGTGGGTGTTATCAATCAGAATTCAGCACAGCCGTAATCCTATGAGAGATGAAAGAAGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| 3UTR TCA 72 bp | TCTGAATTCAGAAACCTTAGCAATGGCACCCTTTGTTaGAAATTCGGAATCGTTAATGGTGCACGTAATTAC | + |
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Preference number: 3 (lower is better) Translates to: SEFRNLSNGTLC*KFGIVNGARNY Trigger: GTAATTACGTGCACCATTAACGATTCCGAATTTTCAACAAAGGGTGCCATTGCTAAGGTTTCTGAATTCAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| 3UTR GCA 72 bp | CTCACACATTTGCTTATTTATCCCACAGGAACTATTTaGCATCGTGAGTCTGAATTCAGAAACCTTAGCAAT | + |
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Preference number: 3 (lower is better) Translates to: LTHLLIYPTGTI*HRESEFRNLSN Trigger: ATTGCTAAGGTTTCTGAATTCAGACTCACGATGGCAAATAGTTCCTGTGGGATAAATAAGCAAATGTGTGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| 3UTR CCA 72 bp | TCCTTGCAACAGTTATATGCAAGGACTTGTTTTATTTaGAACAGGCTATATTGCCTGATGATAATGCCATGG | + |
|
Preference number: 3 (lower is better) Translates to: SLQQLYARTCFI*NRLYCLMIMPW Trigger: CCATGGCATTATCATCAGGCAATATAGCCTGTTCCAAATAAAACAAGTCCTTGCATATAACTGTTGCAAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| 3UTR-3UTR CAA 90 bp | CAAGAGAAATTCTATGAAATACTTGTAAGCATATGGAGCAATACTACGTACTCCTTGGAACAGGCTATATaGCCTGATGATAATGCCATG | + |
|
Preference number: 3 (lower is better) Translates to: QEKFYEILVSIWSNTTYSLEQAI*PDDNAM Trigger: CATGGCATTATCATCAGGCAATATAGCCTGTTCCAA...GGAGTACGTAGTATTGCTCCATATGCTTACAAGTATTTCATAGAATTTCTCTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| 3UTR GCA 72 bp | ATGGAGCAATACTACGTACTCCTTGCAACAGTTATATaGAAGGACTTGTTTTATTTGGAACAGGCTATATTG | + |
|
Preference number: 3 (lower is better) Translates to: MEQYYVLLATVI*KDLFYLEQAIL Trigger: CAATATAGCCTGTTCCAAATAAAACAAGTCCTTGCATATAACTGTTGCAAGGAGTACGTAGTATTGCTCCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| 3UTR-3UTR CAA 90 bp | CAAGAGAAATTCTATGAAATACTTGTAAGCATATGGAGCAATACTACGTACTCCAAGGACTTGTTTTATTaGGAACAGGCTATATTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: QEKFYEILVSIWSNTTYSKDLFY*EQAILP Trigger: AGGCAATATAGCCTGTTCCAAATAAAACAAGTCCTT...GGAGTACGTAGTATTGCTCCATATGCTTACAAGTATTTCATAGAATTTCTCTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| 3UTR TCA 72 bp | TGTGTTCAACCCTTTAGGTGTGCAAGAGAAATTCTATaGAATACTTGTAAGCATATGGAGCAATACTACGTA | + |
|
Preference number: 3 (lower is better) Translates to: CVQPFRCAREIL*NTCKHMEQYYV Trigger: TACGTAGTATTGCTCCATATGCTTACAAGTATTTCATAGAATTTCTCTTGCACACCTAAAGGGTTGAACACA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS-3UTR TCA 90 bp | TGCTTATTTATCCCACAGGAACTATTTGCCATCGTGAGTCTGAATTCAGAAACCTCAGTACACTCCCTTTaGAAGGTGGAGGGCTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: CLFIPQELFAIVSLNSETSVHSL*KVEGCS Trigger: GCTACAGCCCTCCACCTTTCAAAGGGAGTGTACTGA...GGTTTCTGAATTCAGACTCACGATGGCAAATAGTTCCTGTGGGATAAATAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS-3UTR GCA 90 bp | TGCTTATTTATCCCACAGGAACTATTTGCCATCGTGAGTCTGAATTCAGAAACCGATGCCCTGGGGAAGTaGAGAGGATATCATCAGTCA | + |
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Preference number: 4 (lower is better) Translates to: CLFIPQELFAIVSLNSETDALGK*RGYHQS Trigger: TGACTGATGATATCCTCTGCACTTCCCCAGGGCATC...GGTTTCTGAATTCAGACTCACGATGGCAAATAGTTCCTGTGGGATAAATAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS-3UTR GCA 90 bp | GCAAGGACTTGTTTTATTTGGAACAGGCTATATTGCCTGATGATAATGCCATGGTCTTTCTTGTCAAGATaGCCTGGGGAAGTGCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: ARTCFIWNRLYCLMIMPWSFLSR*PGEVQR Trigger: CCTCTGCACTTCCCCAGGGCATCTTGACAAGAAAGA...CCATGGCATTATCATCAGGCAATATAGCCTGTTCCAAATAAAACAAGTCCTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS-3UTR CCA 90 bp | TGCTTATTTATCCCACAGGAACTATTTGCCATCGTGAGTCTGAATTCAGAAACCGAGGGCATTGGTGACTaGGACTGTAGAGACAGACAA | + |
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Preference number: 4 (lower is better) Translates to: CLFIPQELFAIVSLNSETEGIGD*DCRDRQ Trigger: TTGTCTGTCTCTACAGTCCCAGTCACCAATGCCCTC...GGTTTCTGAATTCAGACTCACGATGGCAAATAGTTCCTGTGGGATAAATAAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS-3UTR TCA 90 bp | AAAACTGGAGCTTTTTATGTGTTCAACCCTTTAGGTGTGCAAGAGAAATTCTATTGTCGCAAGAGCCTCTaGCTGAGGGCATTGGTGACT | + |
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Preference number: 4 (lower is better) Translates to: KTGAFYVFNPLGVQEKFYCRKSL*LRALVT Trigger: AGTCACCAATGCCCTCAGTCAGAGGCTCTTGCGACA...ATAGAATTTCTCTTGCACACCTAAAGGGTTGAACACATAAAAAGCTCCAGTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS-3UTR TCA 90 bp | CTACGTACTCCTTGCAACAGTTATATGCAAGGACTTGTTTTATTTGGAACAGGCCACCTTCCTTGGTCGTaGGTACATCAACGTTTCCAT | + |
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Preference number: 4 (lower is better) Translates to: LRTPCNSYMQGLVLFGTGHLPWS*VHQRFH Trigger: ATGGAAACGTTGATGTACTCACGACCAAGGAAGGTG...GCCTGTTCCAAATAAAACAAGTCCTTGCATATAACTGTTGCAAGGAGTACGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS-3UTR GCA 90 bp | ATCGTGAGTCTGAATTCAGAAACCTTAGCAATGGCACCCTTTGTTGAAAATTCGCCCAAGGCCATTAAATaGACCAGTCTCTATGTCTGC | + |
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Preference number: 4 (lower is better) Translates to: IVSLNSETLAMAPFVENSPKAIK*TSLYVC Trigger: GCAGACATAGAGACTGGTGCATTTAATGGCCTTGGG...CGAATTTTCAACAAAGGGTGCCATTGCTAAGGTTTCTGAATTCAGACTCACGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS-3UTR CCA 90 bp | GCCATCGTGAGTCTGAATTCAGAAACCTTAGCAATGGCACCCTTTGTTGAAAATAAATACTCGAGACTGTaGAGACCAAGGAACATGCCT | + |
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Preference number: 4 (lower is better) Translates to: AIVSLNSETLAMAPFVENKYSRL*RPRNMP Trigger: AGGCATGTTCCTTGGTCTCCACAGTCTCGAGTATTT...ATTTTCAACAAAGGGTGCCATTGCTAAGGTTTCTGAATTCAGACTCACGATGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS-3UTR TCA 90 bp | ATCGTGAGTCTGAATTCAGAAACCTTAGCAATGGCACCCTTTGTTGAAAATTCGTGGTGGGTTGTTTTATaGCCATACATGCTGTACTGC | + |
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Preference number: 4 (lower is better) Translates to: IVSLNSETLAMAPFVENSWWVVL*PYMLYC Trigger: GCAGTACAGCATGTATGGTCATAAAACAACCCACCA...CGAATTTTCAACAAAGGGTGCCATTGCTAAGGTTTCTGAATTCAGACTCACGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS-3UTR TCA 90 bp | TGCTTATTTATCCCACAGGAACTATTTGCCATCGTGAGTCTGAATTCAGAAACCCCTGTGAGTGGTGAATaGTTTTCTCGTTCTAACAGG | + |
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Preference number: 4 (lower is better) Translates to: CLFIPQELFAIVSLNSETPVSGE*FSRSNR Trigger: CCTGTTAGAACGAGAAAATCATTCACCACTCACAGG...GGTTTCTGAATTCAGACTCACGATGGCAAATAGTTCCTGTGGGATAAATAAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS-3UTR CCA 90 bp | ATCCAAGAAAACTGGAGCTTTTTATGTGTTCAACCCTTTAGGTGTGCAAGAGAAACTCCCTTTGAAAGGTaGAGGGCTGTAGCATATCAC | + |
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Preference number: 4 (lower is better) Translates to: IQENWSFLCVQPFRCARETPFER*RAVAYH Trigger: GTGATATGCTACAGCCCTCCACCTTTCAAAGGGAGT...TTCTCTTGCACACCTAAAGGGTTGAACACATAAAAAGCTCCAGTTTTCTTGGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS-3UTR CCA 90 bp | ATCGTGAGTCTGAATTCAGAAACCTTAGCAATGGCACCCTTTGTTGAAAATTCGGTAGACATGAACCATTaGGCTCACCATGTGTTGTTC | + |
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Preference number: 4 (lower is better) Translates to: IVSLNSETLAMAPFVENSVDMNH*AHHVLF Trigger: GAACAACACATGGTGAGCCCAATGGTTCATGTCTAC...CGAATTTTCAACAAAGGGTGCCATTGCTAAGGTTTCTGAATTCAGACTCACGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS-3UTR TCA 90 bp | ATCGTGAGTCTGAATTCAGAAACCTTAGCAATGGCACCCTTTGTTGAAAATTCGGACTTCATTAAGGTGTaGATGATGTTGCCTGCAAGA | + |
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Preference number: 4 (lower is better) Translates to: IVSLNSETLAMAPFVENSDFIKV*MMLPAR Trigger: TCTTGCAGGCAACATCATTCACACCTTAATGAAGTC...CGAATTTTCAACAAAGGGTGCCATTGCTAAGGTTTCTGAATTCAGACTCACGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS-3UTR TCA 90 bp | GCAAGGACTTGTTTTATTTGGAACAGGCTATATTGCCTGATGATAATGCCATGGTCAGATGATTGCCATTaGGATAAAGCTTCTGGAGTC | + |
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Preference number: 4 (lower is better) Translates to: ARTCFIWNRLYCLMIMPWSDDCH*DKASGV Trigger: GACTCCAGAAGCTTTATCTCAATGGCAATCATCTGA...CCATGGCATTATCATCAGGCAATATAGCCTGTTCCAAATAAAACAAGTCCTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS-3UTR TCA 90 bp | CTATATTGCCTGATGATAATGCCATGGCTTCCTCAATTGTCCCTGAGTTTCACTCATCCTGAAAGGATATaGAATCTGTTGATTGGTCTG | + |
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Preference number: 4 (lower is better) Translates to: LYCLMIMPWLPQLSLSFTHPERI*NLLIGL Trigger: CAGACCAATCAACAGATTTCATATCCTTTCAGGATG...AGTGAAACTCAGGGACAATTGAGGAAGCCATGGCATTATCATCAGGCAATATAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS-3UTR TCA 90 bp | CTACGTACTCCTTGCAACAGTTATATGCAAGGACTTGTTTTATTTGGAACAGGCTTCTTAGGTACTCTGTaGTGCCAAGTTGCTGAAGTT | + |
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Preference number: 4 (lower is better) Translates to: LRTPCNSYMQGLVLFGTGFLGTL*CQVAEV Trigger: AACTTCAGCAACTTGGCATCACAGAGTACCTAAGAA...GCCTGTTCCAAATAAAACAAGTCCTTGCATATAACTGTTGCAAGGAGTACGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS-3UTR GCA 90 bp | TGCTTATTTATCCCACAGGAACTATTTGCCATCGTGAGTCTGAATTCAGAAACCAAATGGATGTATTCTTaGTTGATAGGCGGCTGTCAC | + |
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Preference number: 4 (lower is better) Translates to: CLFIPQELFAIVSLNSETKWMYS*LIGGCH Trigger: GTGACAGCCGCCTATCAAGCAAGAATACATCCATTT...GGTTTCTGAATTCAGACTCACGATGGCAAATAGTTCCTGTGGGATAAATAAGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS-3UTR GCA 90 bp | GCAAGGACTTGTTTTATTTGGAACAGGCTATATTGCCTGATGATAATGCCATGGCTTCCAGAACTTCAATaGGGTTGTTTCCCAAGTGAA | + |
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Preference number: 4 (lower is better) Translates to: ARTCFIWNRLYCLMIMPWLPELQ*GCFPSE Trigger: TTCACTTGGGAAACAACCGCATTGAAGTTCTGGAAG...CCATGGCATTATCATCAGGCAATATAGCCTGTTCCAAATAAAACAAGTCCTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS-3UTR CCA 90 bp | TGCTTATTTATCCCACAGGAACTATTTGCCATCGTGAGTCTGAATTCAGAAACCCTCTTCGTATACTGGTaGAGTAGGGCAAAAAGATTC | + |
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Preference number: 4 (lower is better) Translates to: CLFIPQELFAIVSLNSETLFVYW*SRAKRF Trigger: GAATCTTTTTGCCCTACTCCACCAGTATACGAAGAG...GGTTTCTGAATTCAGACTCACGATGGCAAATAGTTCCTGTGGGATAAATAAGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS-3UTR CCA 90 bp | ATCGTGAGTCTGAATTCAGAAACCTTAGCAATGGCACCCTTTGTTGAAAATTCGATGCTCTTCGTATACTaGTGGAGTAGGGCAAAAAGA | + |
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Preference number: 4 (lower is better) Translates to: IVSLNSETLAMAPFVENSMLFVY*WSRAKR Trigger: TCTTTTTGCCCTACTCCACCAGTATACGAAGAGCAT...CGAATTTTCAACAAAGGGTGCCATTGCTAAGGTTTCTGAATTCAGACTCACGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS-3UTR GCA 90 bp | CAAGAGAAATTCTATGAAATACTTGTAAGCATATGGAGCAATACTACGTACTCCTATCATCAGTCATGGTaGCCTTGCCAAGCTTGTGGA | + |
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Preference number: 4 (lower is better) Translates to: QEKFYEILVSIWSNTTYSYHQSW*PCQACG Trigger: TCCACAAGCTTGGCAAGGGCACCATGACTGATGATA...GGAGTACGTAGTATTGCTCCATATGCTTACAAGTATTTCATAGAATTTCTCTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS-3UTR CCA 90 bp | TACTACGTACTCCTTGCAACAGTTATATGCAAGGACTTGTTTTATTTGGAACAGGGCAATGTTTGCAACTaGTTCCCACGAAGATCTAGA | + |
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Preference number: 4 (lower is better) Translates to: YYVLLATVICKDLFYLEQGNVCN*FPRRSR Trigger: TCTAGATCTTCGTGGGAACCAGTTGCAAACATTGCC...CTGTTCCAAATAAAACAAGTCCTTGCATATAACTGTTGCAAGGAGTACGTAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS-3UTR CCA 90 bp | TGCTTATTTATCCCACAGGAACTATTTGCCATCGTGAGTCTGAATTCAGAAACCGTATGGTATCAAACCTaGTGCTTTGGTAGGTTGTTT | + |
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Preference number: 4 (lower is better) Translates to: CLFIPQELFAIVSLNSETVWYQT*CFGRLF Trigger: AAACAACCTACCAAAGCACCAGGTTTGATACCATAC...GGTTTCTGAATTCAGACTCACGATGGCAAATAGTTCCTGTGGGATAAATAAGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS-3UTR CCA 90 bp | GCAAGGACTTGTTTTATTTGGAACAGGCTATATTGCCTGATGATAATGCCATGGTGGCTTTGTAAGGTATaGTATCAAACCTGGTGCTTT | + |
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Preference number: 4 (lower is better) Translates to: ARTCFIWNRLYCLMIMPWWLCKV*YQTWCF Trigger: AAAGCACCAGGTTTGATACCATACCTTACAAAGCCA...CCATGGCATTATCATCAGGCAATATAGCCTGTTCCAAATAAAACAAGTCCTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS-3UTR CCA 90 bp | ATCCAAGAAAACTGGAGCTTTTTATGTGTTCAACCCTTTAGGTGTGCAAGAGAACTTTGGACCAAAGGATaGACTTCTGTAGACATGAAC | + |
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Preference number: 4 (lower is better) Translates to: IQENWSFLCVQPFRCARELWTKG*TSVDMN Trigger: GTTCATGTCTACAGAAGTCCATCCTTTGGTCCAAAG...TTCTCTTGCACACCTAAAGGGTTGAACACATAAAAAGCTCCAGTTTTCTTGGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS-3UTR TCA 90 bp | ATCGTGAGTCTGAATTCAGAAACCTTAGCAATGGCACCCTTTGTTGAAAATTCGTCTAACAGGCTCCTTTaGAGATGTTTTGCATCATTT | + |
|
Preference number: 4 (lower is better) Translates to: IVSLNSETLAMAPFVENSSNRLL*RCFASF Trigger: AAATGATGCAAAACATCTTCAAAGGAGCCTGTTAGA...CGAATTTTCAACAAAGGGTGCCATTGCTAAGGTTTCTGAATTCAGACTCACGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
||
| CDS-3UTR TCA 90 bp | GCAAGGACTTGTTTTATTTGGAACAGGCTATATTGCCTGATGATAATGCCATGGTCATATTTGAACCTGTaGGTGGTGAATGATTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ARTCFIWNRLYCLMIMPWSYLNL*VVNDFL Trigger: GAGAAAATCATTCACCACTCACAGGTTCAAATATGA...CCATGGCATTATCATCAGGCAATATAGCCTGTTCCAAATAAAACAAGTCCTTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
||
| CDS-3UTR GCA 90 bp | CAAGAGAAATTCTATGAAATACTTGTAAGCATATGGAGCAATACTACGTACTCCCCATACATGCTGTACTaGAAGTGTACAGGACTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QEKFYEILVSIWSNTTYSPYMLY*KCTGLL Trigger: CAACAGTCCTGTACACTTGCAGTACAGCATGTATGG...GGAGTACGTAGTATTGCTCCATATGCTTACAAGTATTTCATAGAATTTCTCTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
||
| CDS-3UTR CCA 90 bp | AAAACTGGAGCTTTTTATGTGTTCAACCCTTTAGGTGTGCAAGAGAAATTCTATAGGACAATAAGGTACTaGAAGCTGAGTGGATGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KTGAFYVFNPLGVQEKFYRTIRY*KLSGWL Trigger: AAGCCATCCACTCAGCTTCCAGTACCTTATTGTCCT...ATAGAATTTCTCTTGCACACCTAAAGGGTTGAACACATAAAAAGCTCCAGTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
||
| CDS-3UTR TCA 90 bp | CAAGAGAAATTCTATGAAATACTTGTAAGCATATGGAGCAATACTACGTACTCCAAATCCAAGGTGTATTaGAAGGGCATTGGTAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QEKFYEILVSIWSNTTYSKSKVY*KGIGKS Trigger: GGACTTACCAATGCCCTTTCAATACACCTTGGATTT...GGAGTACGTAGTATTGCTCCATATGCTTACAAGTATTTCATAGAATTTCTCTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
||
| CDS-3UTR GCA 90 bp | TACTACGTACTCCTTGCAACAGTTATATGCAAGGACTTGTTTTATTTGGAACAGTGGTATCAAACCTGGTaGTTTGGTAGGTTGTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: YYVLLATVICKDLFYLEQWYQTW*FGRLFQ Trigger: TTGAAACAACCTACCAAAGCACCAGGTTTGATACCA...CTGTTCCAAATAAAACAAGTCCTTGCATATAACTGTTGCAAGGAGTACGTAGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
||
| CDS-3UTR GCA 90 bp | CAAGAGAAATTCTATGAAATACTTGTAAGCATATGGAGCAATACTACGTACTCCGTGAATGATGTTGCCTaGAAGAATCAGCTTTCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: QEKFYEILVSIWSNTTYSVNDVA*KNQLSR Trigger: CCTAGAAAGCTGATTCTTGCAGGCAACATCATTCAC...GGAGTACGTAGTATTGCTCCATATGCTTACAAGTATTTCATAGAATTTCTCTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
||
| CDS-3UTR CCA 90 bp | ATCCAAGAAAACTGGAGCTTTTTATGTGTTCAACCCTTTAGGTGTGCAAGAGAAGGTGGCACACTGATTTaGGATAATTTATTGATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: IQENWSFLCVQPFRCAREGGTLI*DNLLIP Trigger: AGGAATCAATAAATTATCCCAAATCAGTGTGCCACC...TTCTCTTGCACACCTAAAGGGTTGAACACATAAAAAGCTCCAGTTTTCTTGGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
||
| 3UTR CAA 72 bp | TACTACGTACTCCTTGCAACAGTTATATGCAAGGACTaGTTTTATTTGGAACAGGCTATATTGCCTGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: YYVLLATVICKD*FYLEQAILPDD Trigger: ATCATCAGGCAATATAGCCTGTTCCAAATAAAACAAGTCCTTGCATATAACTGTTGCAAGGAGTACGTAGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
||
| 3UTR CAA 72 bp | ATACTTGTAAGCATATGGAGCAATACTACGTACTCCTaGCAACAGTTATATGCAAGGACTTGTTTTATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ILVSIWSNTTYS*QQLYARTCFIW Trigger: CCAAATAAAACAAGTCCTTGCATATAACTGTTGCAAGGAGTACGTAGTATTGCTCCATATGCTTACAAGTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
||
| CDS-3UTR CCA 90 bp | CAAGAGAAATTCTATGAAATACTTGTAAGCATATGGAGCAATACTACGTACTCCAAATCGAAATATGTTTaGAGGAAGACTCTCAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: QEKFYEILVSIWSNTTYSKSKYV*RKTLNS Trigger: GCTATTGAGAGTCTTCCTCCAAACATATTTCGATTT...GGAGTACGTAGTATTGCTCCATATGCTTACAAGTATTTCATAGAATTTCTCTTG 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
||
| CDS GCA 90 bp | TGTCAAGATGCCCTGGGGAAGTGCAGAGGATATCATCAGTCATGGTaGCCTTGCCAAGCTTGTGGATCCATTGCTGCAATCCAACCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: CQDALGKCRGYHQSW*PCQACGSIAAIQPS Trigger: ACTTGGTTGGATTGCAGCAATGGATCCACAAGCTTGGCAAGGGCACCATGACTGATGATATCCTCTGCACTTCCCCAGGGCATCTTGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
||
| CDS CCA 90 bp | GAAGTGCAGAGGATATCATCAGTCATGGTGCCCTTGCCAAGCTTGTaGATCCATTGCTGCAATCCAACCAAGTCACAAGAGCAGTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: EVQRISSVMVPLPSL*IHCCNPTKSQEQSQ Trigger: CTGGGACTGCTCTTGTGACTTGGTTGGATTGCAGCAATGGATCCACAAGCTTGGCAAGGGCACCATGACTGATGATATCCTCTGCACTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
||
| CDS CCA 90 bp | TCTTGTCAAGATGCCCTGGGGAAGTGCAGAGGATATCATCAGTCATaGTGCCCTTGCCAAGCTTGTGGATCCATTGCTGCAATCCAACCA | + |
|
Preference number: 5 (lower is better) Translates to: SCQDALGKCRGYHQS*CPCQACGSIAAIQP Trigger: TGGTTGGATTGCAGCAATGGATCCACAAGCTTGGCAAGGGCACCATGACTGATGATATCCTCTGCACTTCCCCAGGGCATCTTGACAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
||
| CDS TCA 90 bp | TGTGGAGGAGGCTGTAGATCTGACAAGCTTTCTATATTGCGCTCCTaGCAGTGGATAAGAAGCCCCGAAGGGGAGAGAACTTTGCAATTG | + |
|
Preference number: 5 (lower is better) Translates to: CGGGCRSDKLSILRS*QWIRSPEGERTLQL Trigger: CAATTGCAAAGTTCTCTCCCCTTCGGGGCTTCTTATCCACTGTCAGGAGCGCAATATAGAAAGCTTGTCAGATCTACAGCCTCCTCCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
||
| CDS GCA 90 bp | GGGCACAGCATCAGTGAGAGAACTGAAGAGTGTACTAGCTGTATCTaGCGCCACTGTGGGAGAAGTGACAATAACATAAGTAGTCTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: GHSISERTEECTSCI*RHCGRSDNNISSLG Trigger: ACCCAGACTACTTATGTTATTGTCACTTCTCCCACAGTGGCGGCAGATACAGCTAGTACACTCTTCAGTTCTCTCACTGATGCTGTGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
||
| CDS CCA 90 bp | GCAATTGCAAGGGATAGGACAATAAGGTACTGGAAGCTGAGTGGATaGCTTTGTAAGGTATGGTATCAAACCTGGTGCTTTGGTAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: AIARDRTIRYWKLSG*LCKVWYQTWCFGRL Trigger: CAACCTACCAAAGCACCAGGTTTGATACCATACCTTACAAAGCCATCCACTCAGCTTCCAGTACCTTATTGTCCTATCCCTTGCAATTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
||
| CDS CCA 90 bp | AGGGGAGAGAACTTTGCAATTGCAAGGGATAGGACAATAAGGTACTaGAAGCTGAGTGGATGGCTTTGTAAGGTATGGTATCAAACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RGENFAIARDRTIRY*KLSGWLCKVWYQTW Trigger: CCAGGTTTGATACCATACCTTACAAAGCCATCCACTCAGCTTCCAGTACCTTATTGTCCTATCCCTTGCAATTGCAAAGTTCTCTCCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
||
| CDS CCA 90 bp | CAAATGCTTTGGACCAAAGGATGGACTTCTGTAGACATGAACCATTaGGCTCACCATGTGTTGTTCATAGAGAGAGGAAGAGGGTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: QMLWTKGWTSVDMNH*AHHVLFIERGRGSF Trigger: GAAAGACCCTCTTCCTCTCTCTATGAACAACACATGGTGAGCCCAATGGTTCATGTCTACAGAAGTCCATCCTTTGGTCCAAAGCATTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
||
| CDS-3UTR CAA 90 bp | CTATATTGCCTGATGATAATGCCATGGCTTCCTCAATTGTCCCTGAGTTTCACTATCAGCTTTCTAGGGTaGTGTGGAGGAGGCTGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: LYCLMIMPWLPQLSLSFTISFLG*CGGGCR Trigger: TCTACAGCCTCCTCCACACAACCCTAGAAAGCTGAT...AGTGAAACTCAGGGACAATTGAGGAAGCCATGGCATTATCATCAGGCAATATAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
||
| CDS GCA 90 bp | AAGAGGGTCTTTCCGTTGTATGGTGGGTTGTTTTATGACCATACATaGTGTACTGCAAGTGTACAGGACTGTTGTCTCTCAGTTGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: KRVFPLYGGLFYDHT*CTASVQDCCLSVVP Trigger: AGGAACAACTGAGAGACAACAGTCCTGTACACTTGCAGTACAGCATGTATGGTCATAAAACAACCCACCATACAACGGAAAGACCCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
||
| CDS CCA 90 bp | ATGTATTCTTGCTTGATAGGCGGCTGTCACTTGTTGAAGATGTTATaGCCAGCAAAGATCCTGATGGATCCTCATGCTCTTCGTATACTG | + |
|
Preference number: 5 (lower is better) Translates to: MYSCLIGGCHLLKML*PAKILMDPHALRIL Trigger: CAGTATACGAAGAGCATGAGGATCCATCAGGATCTTTGCTGGCCATAACATCTTCAACAAGTGACAGCCGCCTATCAAGCAAGAATACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
||
| CDS-3UTR CAA 90 bp | TGCTTATTTATCCCACAGGAACTATTTGCCATCGTGAGTCTGAATTCAGAAACCTTGCAGGCCCACTTATaGTCCTCCAATTGGAGATCC | + |
|
Preference number: 5 (lower is better) Translates to: CLFIPQELFAIVSLNSETLQAHL*SSNWRS Trigger: GGATCTCCAATTGGAGGACAATAAGTGGGCCTGCAA...GGTTTCTGAATTCAGACTCACGATGGCAAATAGTTCCTGTGGGATAAATAAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
||
| CDS-3UTR CAA 90 bp | TGCTTATTTATCCCACAGGAACTATTTGCCATCGTGAGTCTGAATTCAGAAACCCTACCAACACCTTCCTaGGTCGTGAGTACATCAACG | + |
|
Preference number: 5 (lower is better) Translates to: CLFIPQELFAIVSLNSETLPTPS*VVSTST Trigger: CGTTGATGTACTCACGACCAAGGAAGGTGTTGGTAG...GGTTTCTGAATTCAGACTCACGATGGCAAATAGTTCCTGTGGGATAAATAAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
||
| CDS GCA 90 bp | CTTGTTGAAGATGTTATGGCCAGCAAAGATCCTGATGGATCCTCATaGTCTTCGTATACTGGTGGAGTAGGGCAAAAAGATTCCTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LVEDVMASKDPDGSS*SSYTGGVGQKDSFF Trigger: GAAAAAGGAATCTTTTTGCCCTACTCCACCAGTATACGAAGAGCATGAGGATCCATCAGGATCTTTGCTGGCCATAACATCTTCAACAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
||
| CDS CCA 90 bp | AAAAGATTCCTTTTTCAGGCGACTCAGTACACTCCCTTTGAAAGGTaGAGGGCTGTAGCATATCACATCACCAATTATAGATTGTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KRFLFQATQYTPFER*RAVAYHITNYRLWR Trigger: CCTCCACAATCTATAATTGGTGATGTGATATGCTACAGCCCTCCACCTTTCAAAGGGAGTGTACTGAGTCGCCTGAAAAAGGAATCTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
||
| CDS-3UTR CAA 90 bp | CTACGTACTCCTTGCAACAGTTATATGCAAGGACTTGTTTTATTTGGAACAGGCTGGATGTATTCTTGCTaGATAGGCGGCTGTCACTTG | + |
|
Preference number: 5 (lower is better) Translates to: LRTPCNSYMQGLVLFGTGWMYSC*IGGCHL Trigger: CAAGTGACAGCCGCCTATCAAGCAAGAATACATCCA...GCCTGTTCCAAATAAAACAAGTCCTTGCATATAACTGTTGCAAGGAGTACGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
||
| CDS-3UTR CAA 90 bp | GCCATCGTGAGTCTGAATTCAGAAACCTTAGCAATGGCACCCTTTGTTGAAAATTGTAGACATGAACCATaGGGCTCACCATGTGTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: AIVSLNSETLAMAPFVENCRHEP*GSPCVV Trigger: AACAACACATGGTGAGCCCAATGGTTCATGTCTACA...ATTTTCAACAAAGGGTGCCATTGCTAAGGTTTCTGAATTCAGACTCACGATGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
||
| CDS-3UTR CAA 90 bp | CTATATTGCCTGATGATAATGCCATGGCTTCCTCAATTGTCCCTGAGTTTCACTCTTCTTCCAAATGCTTaGGACCAAAGGATGGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: LYCLMIMPWLPQLSLSFTLLPNA*DQRMDF Trigger: GAAGTCCATCCTTTGGTCCAAAGCATTTGGAAGAAG...AGTGAAACTCAGGGACAATTGAGGAAGCCATGGCATTATCATCAGGCAATATAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
||
| CDS CCA 90 bp | AGGACAATAAGGTACTGGAAGCTGAGTGGATGGCTTTGTAAGGTATaGTATCAAACCTGGTGCTTTGGTAGGTTGTTTCAAAATGGATGT | + |
|
Preference number: 5 (lower is better) Translates to: RTIRYWKLSGWLCKV*YQTWCFGRLFQNGC Trigger: ACATCCATTTTGAAACAACCTACCAAAGCACCAGGTTTGATACCATACCTTACAAAGCCATCCACTCAGCTTCCAGTACCTTATTGTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
||
| CDS-3UTR CAA 90 bp | TGCTTATTTATCCCACAGGAACTATTTGCCATCGTGAGTCTGAATTCAGAAACCAACATAAGGCAATGTTaGCAACTGGTTCCCACGAAG | + |
|
Preference number: 5 (lower is better) Translates to: CLFIPQELFAIVSLNSETNIRQC*QLVPTK Trigger: CTTCGTGGGAACCAGTTGCAAACATTGCCTTATGTT...GGTTTCTGAATTCAGACTCACGATGGCAAATAGTTCCTGTGGGATAAATAAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
||
| CDS-3UTR CAA 90 bp | ATCGTGAGTCTGAATTCAGAAACCTTAGCAATGGCACCCTTTGTTGAAAATTCGTGCAACAATTCACAATaGCAGGCCCACTTATTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: IVSLNSETLAMAPFVENSCNNSQ*QAHLLS Trigger: GGACAATAAGTGGGCCTGCAATTGTGAATTGTTGCA...CGAATTTTCAACAAAGGGTGCCATTGCTAAGGTTTCTGAATTCAGACTCACGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
||
| CDS-3UTR CAA 90 bp | ATCCAAGAAAACTGGAGCTTTTTATGTGTTCAACCCTTTAGGTGTGCAAGAGAACTCTGTGATGCCAAGTaGCTGAAGTTCCCTCTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: IQENWSFLCVQPFRCARELCDAK*LKFPLF Trigger: AAAGAGAGGGAACTTCAGCAACTTGGCATCACAGAG...TTCTCTTGCACACCTAAAGGGTTGAACACATAAAAAGCTCCAGTTTTCTTGGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
||
| CDS TCA 90 bp | TGCACCAGTCTCTATGTCTGCTATATTGTTAAATCCAAGGTGTATTaGAAGGGCATTGGTAAGTCCAGAAAAGTCGTTCGTGTGAAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: CTSLYVCYIVKSKVY*KGIGKSRKVVRVKH Trigger: ATGCTTCACACGAACGACTTTTCTGGACTTACCAATGCCCTTTCAATACACCTTGGATTTAACAATATAGCAGACATAGAGACTGGTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
||
| CDS-3UTR CAA 90 bp | GCAAGGACTTGTTTTATTTGGAACAGGCTATATTGCCTGATGATAATGCCATGGTGTATTGAAAGGGCATaGGTAAGTCCAGAAAAGTCG | + |
|
Preference number: 5 (lower is better) Translates to: ARTCFIWNRLYCLMIMPWCIERA*VSPEKS Trigger: CGACTTTTCTGGACTTACCAATGCCCTTTCAATACA...CCATGGCATTATCATCAGGCAATATAGCCTGTTCCAAATAAAACAAGTCCTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
||
| CDS-3UTR CAA 90 bp | ATCGTGAGTCTGAATTCAGAAACCTTAGCAATGGCACCCTTTGTTGAAAATTCGATGATTGATATGAAGTaGCTTAAGAAGCCCAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: IVSLNSETLAMAPFVENSMIDMK*LKKPKA Trigger: GGCCTTGGGCTTCTTAAGCAACTTCATATCAATCAT...CGAATTTTCAACAAAGGGTGCCATTGCTAAGGTTTCTGAATTCAGACTCACGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
||
| CDS-3UTR CAA 90 bp | TACTACGTACTCCTTGCAACAGTTATATGCAAGGACTTGTTTTATTTGGAACAGCTTATTGTCCTCCAATaGGAGATCCAATATCCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: YYVLLATVICKDLFYLEQLIVLQ*EIQYPA Trigger: GGCCGGATATTGGATCTCCAATTGGAGGACAATAAG...CTGTTCCAAATAAAACAAGTCCTTGCATATAACTGTTGCAAGGAGTACGTAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
||
| CDS-3UTR CAA 90 bp | CTACGTACTCCTTGCAACAGTTATATGCAAGGACTTGTTTTATTTGGAACAGGCAGTTTAGGCATTGGGTaGAAGGTCCCTGGTAATATT | + |
|
Preference number: 5 (lower is better) Translates to: LRTPCNSYMQGLVLFGTGSLGIG*KVPGNI Trigger: AATATTACCAGGGACCTTCAACCCAATGCCTAAACT...GCCTGTTCCAAATAAAACAAGTCCTTGCATATAACTGTTGCAAGGAGTACGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
||
| CDS-3UTR CAA 90 bp | GCAAGGACTTGTTTTATTTGGAACAGGCTATATTGCCTGATGATAATGCCATGGAGGTCATCTAAGATGTaGCTTACAGGTAAATGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: ARTCFIWNRLYCLMIMPWRSSKM*LTGKWV Trigger: CACCCATTTACCTGTAAGCAACATCTTAGATGACCT...CCATGGCATTATCATCAGGCAATATAGCCTGTTCCAAATAAAACAAGTCCTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
||
| CDS-3UTR CAA 90 bp | GCAAGGACTTGTTTTATTTGGAACAGGCTATATTGCCTGATGATAATGCCATGGGCTTTTAATTCTTTCTaGTCAAGATGCCCTGGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: ARTCFIWNRLYCLMIMPWAFNSF*SRCPGE Trigger: TTCCCCAGGGCATCTTGACAAGAAAGAATTAAAAGC...CCATGGCATTATCATCAGGCAATATAGCCTGTTCCAAATAAAACAAGTCCTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
||
| CDS-3UTR CAA 90 bp | CTACGTACTCCTTGCAACAGTTATATGCAAGGACTTGTTTTATTTGGAACAGGCAAGAGGGTCTTTCCGTaGTATGGTGGGTTGTTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: LRTPCNSYMQGLVLFGTGKRVFP*YGGLFY Trigger: ATAAAACAACCCACCATACAACGGAAAGACCCTCTT...GCCTGTTCCAAATAAAACAAGTCCTTGCATATAACTGTTGCAAGGAGTACGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
||
| CDS-3UTR CAA 90 bp | TACTACGTACTCCTTGCAACAGTTATATGCAAGGACTTGTTTTATTTGGAACAGTGGGCTCACCATGTGTaGTTCATAGAGAGAGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: YYVLLATVICKDLFYLEQWAHHV*FIERGR Trigger: TCTTCCTCTCTCTATGAACAACACATGGTGAGCCCA...CTGTTCCAAATAAAACAAGTCCTTGCATATAACTGTTGCAAGGAGTACGTAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
||
| CDS-3UTR CAA 90 bp | AAAACTGGAGCTTTTTATGTGTTCAACCCTTTAGGTGTGCAAGAGAAATTCTATTTTAGCCTGTTGAGCTaGCTGAAGGCACTTGGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: KTGAFYVFNPLGVQEKFYFSLLS*LKALGS Trigger: TGAACCAAGTGCCTTCAGCAAGCTCAACAGGCTAAA...ATAGAATTTCTCTTGCACACCTAAAGGGTTGAACACATAAAAAGCTCCAGTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
||
| CDS-3UTR CAA 90 bp | GCCATCGTGAGTCTGAATTCAGAAACCTTAGCAATGGCACCCTTTGTTGAAAATTGGTGCTTTGGTAGGTaGTTTCAAAATGGATGTATT | + |
|
Preference number: 5 (lower is better) Translates to: AIVSLNSETLAMAPFVENWCFGR*FQNGCI Trigger: AATACATCCATTTTGAAACAACCTACCAAAGCACCA...ATTTTCAACAAAGGGTGCCATTGCTAAGGTTTCTGAATTCAGACTCACGATGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
||
| CDS-3UTR CAA 90 bp | GCAAGGACTTGTTTTATTTGGAACAGGCTATATTGCCTGATGATAATGCCATGGATCAAACCTGGTGCTTaGGTAGGTTGTTTCAAAATG | + |
|
Preference number: 5 (lower is better) Translates to: ARTCFIWNRLYCLMIMPWIKPGA*VGCFKM Trigger: CATTTTGAAACAACCTACCAAAGCACCAGGTTTGAT...CCATGGCATTATCATCAGGCAATATAGCCTGTTCCAAATAAAACAAGTCCTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
||
| CDS-3UTR CAA 90 bp | CAAGAGAAATTCTATGAAATACTTGTAAGCATATGGAGCAATACTACGTACTCCGAAGGGGAGAGAACTTaGCAATTGCAAGGGATAGGA | + |
|
Preference number: 5 (lower is better) Translates to: QEKFYEILVSIWSNTTYSEGERT*QLQGIG Trigger: TCCTATCCCTTGCAATTGCAAAGTTCTCTCCCCTTC...GGAGTACGTAGTATTGCTCCATATGCTTACAAGTATTTCATAGAATTTCTCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS-3UTR CAA 90 bp | TGCTTATTTATCCCACAGGAACTATTTGCCATCGTGAGTCTGAATTCAGAAACCCGTTCGTGTGAAGCATaGTCAAGCCATTATTTAATA | + |
|
Preference number: 5 (lower is better) Translates to: CLFIPQELFAIVSLNSETRSCEA*SSHYLI Trigger: TATTAAATAATGGCTTGACAATGCTTCACACGAACG...GGTTTCTGAATTCAGACTCACGATGGCAAATAGTTCCTGTGGGATAAATAAGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS-3UTR CAA 90 bp | TACTACGTACTCCTTGCAACAGTTATATGCAAGGACTTGTTTTATTTGGAACAGAAAATGGATGTATTCTaGCTTGATAGGCGGCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: YYVLLATVICKDLFYLEQKMDVF*LDRRLS Trigger: TGACAGCCGCCTATCAAGCAAGAATACATCCATTTT...CTGTTCCAAATAAAACAAGTCCTTGCATATAACTGTTGCAAGGAGTACGTAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS-3UTR CAA 90 bp | CTACGTACTCCTTGCAACAGTTATATGCAAGGACTTGTTTTATTTGGAACAGGCGCATGCAAGTTAGCTTaGAGCTCAAAGTATTCATTT | + |
|
Preference number: 5 (lower is better) Translates to: LRTPCNSYMQGLVLFGTGACKLA*SSKYSF Trigger: AAATGAATACTTTGAGCTCAAAGCTAACTTGCATGC...GCCTGTTCCAAATAAAACAAGTCCTTGCATATAACTGTTGCAAGGAGTACGTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS TCA 90 bp | AGGTGTATTGAAAGGGCATTGGTAAGTCCAGAAAAGTCGTTCGTGTaGAGCATTGTCAAGCCATTATTTAATAAACTTAAGTGGAAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: RCIERALVSPEKSFV*SIVKPLFNKLKWKG Trigger: ACCTTTCCACTTAAGTTTATTAAATAATGGCTTGACAATGCTTCACACGAACGACTTTTCTGGACTTACCAATGCCCTTTCAATACACCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS GCA 90 bp | ATTATGATTGATATGAAGTTGCTTAAGAAGCCCAAGGCCATTAAATaGACCAGTCTCTATGTCTGCTATATTGTTAAATCCAAGGTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: IMIDMKLLKKPKAIK*TSLYVCYIVKSKVY Trigger: ATACACCTTGGATTTAACAATATAGCAGACATAGAGACTGGTGCATTTAATGGCCTTGGGCTTCTTAAGCAACTTCATATCAATCATAAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS CCA 72 bp | GATGCCCTGGGGAAGTGCAGAGGATATCATCAGTCATaGTGCCCTTGCCAAGCTTGTGGATCCATTGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: DALGKCRGYHQS*CPCQACGSIAA Trigger: TGCAGCAATGGATCCACAAGCTTGGCAAGGGCACCATGACTGATGATATCCTCTGCACTTCCCCAGGGCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS GCA 72 bp | TCAGTCATGGTGCCCTTGCCAAGCTTGTGGATCCATTaGTGCAATCCAACCAAGTCACAAGAGCAGTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SVMVPLPSLWIH*CNPTKSQEQSQ Trigger: CTGGGACTGCTCTTGTGACTTGGTTGGATTGCAGCAATGGATCCACAAGCTTGGCAAGGGCACCATGACTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS CAA 90 bp | GGGGAAGTGCAGAGGATATCATCAGTCATGGTGCCCTTGCCAAGCTaGTGGATCCATTGCTGCAATCCAACCAAGTCACAAGAGCAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: GEVQRISSVMVPLPS*WIHCCNPTKSQEQS Trigger: GGACTGCTCTTGTGACTTGGTTGGATTGCAGCAATGGATCCACAAGCTTGGCAAGGGCACCATGACTGATGATATCCTCTGCACTTCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS CAA 90 bp | AGATGCCCTGGGGAAGTGCAGAGGATATCATCAGTCATGGTGCCCTaGCCAAGCTTGTGGATCCATTGCTGCAATCCAACCAAGTCACAA | + |
|
Preference number: 6 (lower is better) Translates to: RCPGEVQRISSVMVP*PSLWIHCCNPTKSQ Trigger: TTGTGACTTGGTTGGATTGCAGCAATGGATCCACAAGCTTGGCAAGGGCACCATGACTGATGATATCCTCTGCACTTCCCCAGGGCATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS TCA 72 bp | GGCTGTAGATCTGACAAGCTTTCTATATTGCGCTCCTaGCAGTGGATAAGAAGCCCCGAAGGGGAGAGAACT | + |
|
Preference number: 6 (lower is better) Translates to: GCRSDKLSILRS*QWIRSPEGERT Trigger: AGTTCTCTCCCCTTCGGGGCTTCTTATCCACTGTCAGGAGCGCAATATAGAAAGCTTGTCAGATCTACAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS CCA 72 bp | AGGATATCATCAGTCATGGTGCCCTTGCCAAGCTTGTaGATCCATTGCTGCAATCCAACCAAGTCACAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: RISSVMVPLPSL*IHCCNPTKSQE Trigger: CTCTTGTGACTTGGTTGGATTGCAGCAATGGATCCACAAGCTTGGCAAGGGCACCATGACTGATGATATCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS CAA 72 bp | CAGAGGATATCATCAGTCATGGTGCCCTTGCCAAGCTaGTGGATCCATTGCTGCAATCCAACCAAGTCACAA | + |
|
Preference number: 6 (lower is better) Translates to: QRISSVMVPLPS*WIHCCNPTKSQ Trigger: TTGTGACTTGGTTGGATTGCAGCAATGGATCCACAAGCTTGGCAAGGGCACCATGACTGATGATATCCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
||
| CDS CAA 90 bp | AAAGGATGGACTTCTGTAGACATGAACCATTGGGCTCACCATGTGTaGTTCATAGAGAGAGGAAGAGGGTCTTTCCGTTGTATGGTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: KGWTSVDMNHWAHHV*FIERGRGSFRCMVG Trigger: ACCCACCATACAACGGAAAGACCCTCTTCCTCTCTCTATGAACAACACATGGTGAGCCCAATGGTTCATGTCTACAGAAGTCCATCCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS CCA 72 bp | TGCTTGATAGGCGGCTGTCACTTGTTGAAGATGTTATaGCCAGCAAAGATCCTGATGGATCCTCATGCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: CLIGGCHLLKML*PAKILMDPHAL Trigger: AAGAGCATGAGGATCCATCAGGATCTTTGCTGGCCATAACATCTTCAACAAGTGACAGCCGCCTATCAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS CAA 90 bp | GGCTCACCATGTGTTGTTCATAGAGAGAGGAAGAGGGTCTTTCCGTaGTATGGTGGGTTGTTTTATGACCATACATGCTGTACTGCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: GSPCVVHRERKRVFP*YGGLFYDHTCCTAS Trigger: ACTTGCAGTACAGCATGTATGGTCATAAAACAACCCACCATACAACGGAAAGACCCTCTTCCTCTCTCTATGAACAACACATGGTGAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS CAA 90 bp | CCAAATGCTTTGGACCAAAGGATGGACTTCTGTAGACATGAACCATaGGGCTCACCATGTGTTGTTCATAGAGAGAGGAAGAGGGTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: PNALDQRMDFCRHEP*GSPCVVHRERKRVF Trigger: AAAGACCCTCTTCCTCTCTCTATGAACAACACATGGTGAGCCCAATGGTTCATGTCTACAGAAGTCCATCCTTTGGTCCAAAGCATTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS TCA 72 bp | AAGATTCCTTTTTCAGGCGACTCAGTACACTCCCTTTaGAAGGTGGAGGGCTGTAGCATATCACATCACCAA | + |
|
Preference number: 6 (lower is better) Translates to: KIPFSGDSVHSL*KVEGCSISHHQ Trigger: TTGGTGATGTGATATGCTACAGCCCTCCACCTTTCAAAGGGAGTGTACTGAGTCGCCTGAAAAAGGAATCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS TCA 72 bp | GAAGAGGGTCTTTCCGTTGTATGGTGGGTTGTTTTATaGCCATACATGCTGTACTGCAAGTGTACAGGACTG | + |
|
Preference number: 6 (lower is better) Translates to: EEGLSVVWWVVL*PYMLYCKCTGL Trigger: CAGTCCTGTACACTTGCAGTACAGCATGTATGGTCATAAAACAACCCACCATACAACGGAAAGACCCTCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS GCA 72 bp | GATGTTATGGCCAGCAAAGATCCTGATGGATCCTCATaGTCTTCGTATACTGGTGGAGTAGGGCAAAAAGAT | + |
|
Preference number: 6 (lower is better) Translates to: DVMASKDPDGSS*SSYTGGVGQKD Trigger: ATCTTTTTGCCCTACTCCACCAGTATACGAAGAGCATGAGGATCCATCAGGATCTTTGCTGGCCATAACATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS GCA 72 bp | CTTTTAATTCTTTCTTGTCAAGATGCCCTGGGGAAGTaGAGAGGATATCATCAGTCATGGTGCCCTTGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: LLILSCQDALGK*RGYHQSWCPCQ Trigger: TTGGCAAGGGCACCATGACTGATGATATCCTCTGCACTTCCCCAGGGCATCTTGACAAGAAAGAATTAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS CCA 72 bp | TGGACCAAAGGATGGACTTCTGTAGACATGAACCATTaGGCTCACCATGTGTTGTTCATAGAGAGAGGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: WTKGWTSVDMNH*AHHVLFIERGR Trigger: TCTTCCTCTCTCTATGAACAACACATGGTGAGCCCAATGGTTCATGTCTACAGAAGTCCATCCTTTGGTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS CAA 72 bp | ACTTCTGTAGACATGAACCATTGGGCTCACCATGTGTaGTTCATAGAGAGAGGAAGAGGGTCTTTCCGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: TSVDMNHWAHHV*FIERGRGSFRC Trigger: ACAACGGAAAGACCCTCTTCCTCTCTCTATGAACAACACATGGTGAGCCCAATGGTTCATGTCTACAGAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS CAA 72 bp | TTGGACCAAAGGATGGACTTCTGTAGACATGAACCATaGGGCTCACCATGTGTTGTTCATAGAGAGAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LDQRMDFCRHEP*GSPCVVHRERK Trigger: CTTCCTCTCTCTATGAACAACACATGGTGAGCCCAATGGTTCATGTCTACAGAAGTCCATCCTTTGGTCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS CAA 90 bp | GGCATGGAAGGATTATTCACTAAACCAGGGCAAAGAAGATCACTGTaGAGGGCTTTTAATTCTTTCTTGTCAAGATGCCCTGGGGAAGTG | + |
|
Preference number: 6 (lower is better) Translates to: GMEGLFTKPGQRRSL*RAFNSFLSRCPGEV Trigger: CACTTCCCCAGGGCATCTTGACAAGAAAGAATTAAAAGCCCTCAACAGTGATCTTCTTTGCCCTGGTTTAGTGAATAATCCTTCCATGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS CAA 90 bp | GTTGTTCATAGAGAGAGGAAGAGGGTCTTTCCGTTGTATGGTGGGTaGTTTTATGACCATACATGCTGTACTGCAAGTGTACAGGACTGT | + |
|
Preference number: 6 (lower is better) Translates to: VVHRERKRVFPLYGG*FYDHTCCTASVQDC Trigger: ACAGTCCTGTACACTTGCAGTACAGCATGTATGGTCATAAAACAACCCACCATACAACGGAAAGACCCTCTTCCTCTCTCTATGAACAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS GCA 72 bp | ATCAGTGAGAGAACTGAAGAGTGTACTAGCTGTATCTaGCGCCACTGTGGGAGAAGTGACAATAACATAAGT | + |
|
Preference number: 6 (lower is better) Translates to: ISERTEECTSCI*RHCGRSDNNIS Trigger: ACTTATGTTATTGTCACTTCTCCCACAGTGGCGGCAGATACAGCTAGTACACTCTTCAGTTCTCTCACTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS CCA 72 bp | CTTTTTCAGGCGACTCAGTACACTCCCTTTGAAAGGTaGAGGGCTGTAGCATATCACATCACCAATTATAGA | + |
|
Preference number: 6 (lower is better) Translates to: LFQATQYTPFER*RAVAYHITNYR Trigger: TCTATAATTGGTGATGTGATATGCTACAGCCCTCCACCTTTCAAAGGGAGTGTACTGAGTCGCCTGAAAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS CCA 72 bp | AGGTACTGGAAGCTGAGTGGATGGCTTTGTAAGGTATaGTATCAAACCTGGTGCTTTGGTAGGTTGTTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: RYWKLSGWLCKV*YQTWCFGRLFQ Trigger: TTGAAACAACCTACCAAAGCACCAGGTTTGATACCATACCTTACAAAGCCATCCACTCAGCTTCCAGTACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS CCA 72 bp | AGGGATAGGACAATAAGGTACTGGAAGCTGAGTGGATaGCTTTGTAAGGTATGGTATCAAACCTGGTGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: RDRTIRYWKLSG*LCKVWYQTWCF Trigger: AAAGCACCAGGTTTGATACCATACCTTACAAAGCCATCCACTCAGCTTCCAGTACCTTATTGTCCTATCCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS CCA 72 bp | TTCCTCAACTTCTTCCAAATGCTTTGGACCAAAGGATaGACTTCTGTAGACATGAACCATTGGGCTCACCAT | + |
|
Preference number: 6 (lower is better) Translates to: FLNFFQMLWTKG*TSVDMNHWAHH Trigger: ATGGTGAGCCCAATGGTTCATGTCTACAGAAGTCCATCCTTTGGTCCAAAGCATTTGGAAGAAGTTGAGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS CAA 72 bp | TTTAGCTGCAACAATTCACAATTGCAGGCCCACTTATaGTCCTCCAATTGGAGATCCAATATCCGGCCAATG | + |
|
Preference number: 6 (lower is better) Translates to: FSCNNSQLQAHL*SSNWRSNIRPM Trigger: CATTGGCCGGATATTGGATCTCCAATTGGAGGACAATAAGTGGGCCTGCAATTGTGAATTGTTGCAGCTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS CAA 72 bp | AGAGAGAGGAAGAGGGTCTTTCCGTTGTATGGTGGGTaGTTTTATGACCATACATGCTGTACTGCAAGTGTA | + |
|
Preference number: 6 (lower is better) Translates to: RERKRVFPLYGG*FYDHTCCTASV Trigger: TACACTTGCAGTACAGCATGTATGGTCATAAAACAACCCACCATACAACGGAAAGACCCTCTTCCTCTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS CAA 90 bp | GTTTCAAAATGGATGTATTCTTGCTTGATAGGCGGCTGTCACTTGTaGAAGATGTTATGGCCAGCAAAGATCCTGATGGATCCTCATGCT | + |
|
Preference number: 6 (lower is better) Translates to: VSKWMYSCLIGGCHL*KMLWPAKILMDPHA Trigger: AGCATGAGGATCCATCAGGATCTTTGCTGGCCATAACATCTTCAACAAGTGACAGCCGCCTATCAAGCAAGAATACATCCATTTTGAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS CAA 90 bp | ATCAAACCTGGTGCTTTGGTAGGTTGTTTCAAAATGGATGTATTCTaGCTTGATAGGCGGCTGTCACTTGTTGAAGATGTTATGGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: IKPGALVGCFKMDVF*LDRRLSLVEDVMAS Trigger: GCTGGCCATAACATCTTCAACAAGTGACAGCCGCCTATCAAGCAAGAATACATCCATTTTGAAACAACCTACCAAAGCACCAGGTTTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS GCA 72 bp | TTTCCGTTGTATGGTGGGTTGTTTTATGACCATACATaGTGTACTGCAAGTGTACAGGACTGTTGTCTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: FPLYGGLFYDHT*CTASVQDCCLS Trigger: TGAGAGACAACAGTCCTGTACACTTGCAGTACAGCATGTATGGTCATAAAACAACCCACCATACAACGGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS CCA 72 bp | ACCGCATTGTACTCAAGATACAAATACTCGAGACTGTaGAGACCAAGGAACATGCCTTTATTGAGTTTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: TALYSRYKYSRL*RPRNMPLLSLV Trigger: GACCAAACTCAATAAAGGCATGTTCCTTGGTCTCCACAGTCTCGAGTATTTGTATCTTGAGTACAATGCGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS CAA 72 bp | AAATGGATGTATTCTTGCTTGATAGGCGGCTGTCACTaGTTGAAGATGTTATGGCCAGCAAAGATCCTGATG | + |
|
Preference number: 6 (lower is better) Translates to: KWMYSCLIGGCH*LKMLWPAKILM Trigger: CATCAGGATCTTTGCTGGCCATAACATCTTCAACAAGTGACAGCCGCCTATCAAGCAAGAATACATCCATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS CAA 72 bp | TGTGTTGTTCATAGAGAGAGGAAGAGGGTCTTTCCGTaGTATGGTGGGTTGTTTTATGACCATACATGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: CVVHRERKRVFP*YGGLFYDHTCC Trigger: ACAGCATGTATGGTCATAAAACAACCCACCATACAACGGAAAGACCCTCTTCCTCTCTCTATGAACAACACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS CAA 90 bp | GTTGTTTCAAAATGGATGTATTCTTGCTTGATAGGCGGCTGTCACTaGTTGAAGATGTTATGGCCAGCAAAGATCCTGATGGATCCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: VVSKWMYSCLIGGCH*LKMLWPAKILMDPH Trigger: ATGAGGATCCATCAGGATCTTTGCTGGCCATAACATCTTCAACAAGTGACAGCCGCCTATCAAGCAAGAATACATCCATTTTGAAACAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS CCA 72 bp | AATTCACAATTGCAGGCCCACTTATTGTCCTCCAATTaGAGATCCAATATCCGGCCAATGTGTTCTAAAAAG | + |
|
Preference number: 6 (lower is better) Translates to: NSQLQAHLLSSN*RSNIRPMCSKK Trigger: CTTTTTAGAACACATTGGCCGGATATTGGATCTCCAATTGGAGGACAATAAGTGGGCCTGCAATTGTGAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS CCA 72 bp | AACTTTGCAATTGCAAGGGATAGGACAATAAGGTACTaGAAGCTGAGTGGATGGCTTTGTAAGGTATGGTAT | + |
|
Preference number: 6 (lower is better) Translates to: NFAIARDRTIRY*KLSGWLCKVWY Trigger: ATACCATACCTTACAAAGCCATCCACTCAGCTTCCAGTACCTTATTGTCCTATCCCTTGCAATTGCAAAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS CAA 72 bp | GGTGCTTTGGTAGGTTGTTTCAAAATGGATGTATTCTaGCTTGATAGGCGGCTGTCACTTGTTGAAGATGTT | + |
|
Preference number: 6 (lower is better) Translates to: GALVGCFKMDVF*LDRRLSLVEDV Trigger: AACATCTTCAACAAGTGACAGCCGCCTATCAAGCAAGAATACATCCATTTTGAAACAACCTACCAAAGCACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS CAA 90 bp | AGAAGCCCAAGGCCATTAAATGCACCAGTCTCTATGTCTGCTATATaGTTAAATCCAAGGTGTATTGAAAGGGCATTGGTAAGTCCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: RSPRPLNAPVSMSAI*LNPRCIERALVSPE Trigger: TTCTGGACTTACCAATGCCCTTTCAATACACCTTGGATTTAACAATATAGCAGACATAGAGACTGGTGCATTTAATGGCCTTGGGCTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS TCA 72 bp | GATTATTCACTAAACCAGGGCAAAGAAGATCACTGTTaGGGGCTTTTAATTCTTTCTTGTCAAGATGCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: DYSLNQGKEDHC*GLLILSCQDAL Trigger: CAGGGCATCTTGACAAGAAAGAATTAAAAGCCCTCAACAGTGATCTTCTTTGCCCTGGTTTAGTGAATAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS CCA 72 bp | CTGAGTGGATGGCTTTGTAAGGTATGGTATCAAACCTaGTGCTTTGGTAGGTTGTTTCAAAATGGATGTATT | + |
|
Preference number: 6 (lower is better) Translates to: LSGWLCKVWYQT*CFGRLFQNGCI Trigger: AATACATCCATTTTGAAACAACCTACCAAAGCACCAGGTTTGATACCATACCTTACAAAGCCATCCACTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
||
| CDS GCA 72 bp | GATATGAAGTTGCTTAAGAAGCCCAAGGCCATTAAATaGACCAGTCTCTATGTCTGCTATATTGTTAAATCC | + |
|
Preference number: 6 (lower is better) Translates to: DMKLLKKPKAIK*TSLYVCYIVKS Trigger: GGATTTAACAATATAGCAGACATAGAGACTGGTGCATTTAATGGCCTTGGGCTTCTTAAGCAACTTCATATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS CAA 72 bp | ATAGCGTTGTCATTTAAAATCAACACCTTTAGCCTGTaGAGCTTGCTGAAGGCACTTGGTTCAATTATCGTA | + |
|
Preference number: 6 (lower is better) Translates to: IALSFKINTFSL*SLLKALGSIIV Trigger: TACGATAATTGAACCAAGTGCCTTCAGCAAGCTCAACAGGCTAAAGGTGTTGATTTTAAATGACAACGCTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
||
| CDS CAA 90 bp | AAAGGAACAAATCGAAATATGTTTGGAGGAAGACTCTCAATAGCGTaGTCATTTAAAATCAACACCTTTAGCCTGTTGAGCTTGCTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: KGTNRNMFGGRLSIA*SFKINTFSLLSLLK Trigger: CTTCAGCAAGCTCAACAGGCTAAAGGTGTTGATTTTAAATGACAACGCTATTGAGAGTCTTCCTCCAAACATATTTCGATTTGTTCCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
||
| CDS TCA 72 bp | GAAAGGGCATTGGTAAGTCCAGAAAAGTCGTTCGTGTaGAGCATTGTCAAGCCATTATTTAATAAACTTAAG | + |
|
Preference number: 6 (lower is better) Translates to: ERALVSPEKSFV*SIVKPLFNKLK Trigger: CTTAAGTTTATTAAATAATGGCTTGACAATGCTTCACACGAACGACTTTTCTGGACTTACCAATGCCCTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS CAA 90 bp | AGACTCTCAATAGCGTTGTCATTTAAAATCAACACCTTTAGCCTGTaGAGCTTGCTGAAGGCACTTGGTTCAATTATCGTAATGAAATTA | + |
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Preference number: 6 (lower is better) Translates to: RLSIALSFKINTFSL*SLLKALGSIIVMKL Trigger: TAATTTCATTACGATAATTGAACCAAGTGCCTTCAGCAAGCTCAACAGGCTAAAGGTGTTGATTTTAAATGACAACGCTATTGAGAGTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS CAA 90 bp | TCCTCAAGGTCAATCTGTATCAGGAAGTCAAGGTCATCTAAGATGTaGCTTACAGGTAAATGGGTGAATTGGTTTGTTTTAAGATTTACT | + |
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Preference number: 6 (lower is better) Translates to: SSRSICIRKSRSSKM*LTGKWVNWFVLRFT Trigger: AGTAAATCTTAAAACAAACCAATTCACCCATTTACCTGTAAGCAACATCTTAGATGACCTTGACTTCCTGATACAGATTGACCTTGAGGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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| CDS CAA 72 bp | TCAATCTGTATCAGGAAGTCAAGGTCATCTAAGATGTaGCTTACAGGTAAATGGGTGAATTGGTTTGTTTTA | + |
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Preference number: 6 (lower is better) Translates to: SICIRKSRSSKM*LTGKWVNWFVL Trigger: TAAAACAAACCAATTCACCCATTTACCTGTAAGCAACATCTTAGATGACCTTGACTTCCTGATACAGATTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000078386.4 |
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