Pregenerated sensors for SLITRK5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033214Ensembl transcript IDs: ENSMUST00000042767.9, ENSMUST00000227891.2
Found 228 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TACAGAGACTTGTACAGCCCATCATTTGGTCTTCTGAAGTGCAAGTaGACGTGGATCTGTACAAATGCAACTGGGTTTGGTTACACAATC | + |
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Preference number: 1 (lower is better) Translates to: YRDLYSPSFGLLKCK*TWICTNATGFGYTI Trigger: GATTGTGTAACCAAACCCAGTTGCATTTGTACAGATCCACGTGCACTTGCACTTCAGAAGACCAAATGATGGGCTGTACAAGTCTCTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| 3UTR GCA 90 bp | ACATCATACAGAGACTTGTACAGCCCATCATTTGGTCTTCTGAAGTaGAAGTGCACGTGGATCTGTACAAATGCAACTGGGTTTGGTTAC | + |
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Preference number: 1 (lower is better) Translates to: TSYRDLYSPSFGLLK*KCTWICTNATGFGY Trigger: GTAACCAAACCCAGTTGCATTTGTACAGATCCACGTGCACTTGCACTTCAGAAGACCAAATGATGGGCTGTACAAGTCTCTGTATGATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| 3UTR CCA 90 bp | CAGAGGGATAAAGACATCATACAGAGACTTGTACAGCCCATCATTTaGTCTTCTGAAGTGCAAGTGCACGTGGATCTGTACAAATGCAAC | + |
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Preference number: 1 (lower is better) Translates to: QRDKDIIQRLVQPII*SSEVQVHVDLYKCN Trigger: GTTGCATTTGTACAGATCCACGTGCACTTGCACTTCAGAAGACCAAATGATGGGCTGTACAAGTCTCTGTATGATGTCTTTATCCCTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| 3UTR-3UTR TCA 90 bp | GAAGTGAGAGAGAACAAACTTCCTATAACGTTGGGGTGTGCTAATCTCTCAACCAGCTTCCACCGAAGCTaGGAATCCCGTGCCAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: EVRENKLPITLGCANLSTSFHRS*ESRAKA Trigger: TGCCTTGGCACGGGATTCTCAGCTTCGGTGGAAGCT...GGTTGAGAGATTAGCACACCCCAACGTTATAGGAAGTTTGTTCTCTCTCACTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| 3UTR CAA 90 bp | GGAGGGGTGGGAGGAGAAGTGAGAGAGAACAAACTTCCTATAACGTaGGGGTGTGCTAATCTCTCAACCAATGCTCTAAGGAGAAGAGTG | + |
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Preference number: 2 (lower is better) Translates to: GGVGGEVRENKLPIT*GCANLSTNALRRRV Trigger: CACTCTTCTCCTTAGAGCATTGGTTGAGAGATTAGCACACCCCAACGTTATAGGAAGTTTGTTCTCTCTCACTTCTCCTCCCACCCCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| 3UTR-3UTR GCA 90 bp | TCATTTGGTCTTCTGAAGTGCAAGTGCACGTGGATCTGTACAAATGCAACTGGGCCGAGTGTGTCTGCTTaGTTGCTTGTTCTAAACGCA | + |
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Preference number: 2 (lower is better) Translates to: SFGLLKCKCTWICTNATGPSVSA*LLVLNA Trigger: TGCGTTTAGAACAAGCAAGCAAGCAGACACACTCGG...CCCAGTTGCATTTGTACAGATCCACGTGCACTTGCACTTCAGAAGACCAAATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| 3UTR-3UTR GCA 90 bp | CACAACCTGTTTCAAGTCACTCTTGATGCAAATCGCCCTCCAGAAAGCCCTTCTTTCACCGAGTGTGTCTaGTTGCTTGCTTGTTCTAAA | + |
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Preference number: 2 (lower is better) Translates to: HNLFQVTLDANRPPESPSFTECV*LLACSK Trigger: TTTAGAACAAGCAAGCAAGCAGACACACTCGGTGAA...AGAAGGGCTTTCTGGAGGGCGATTTGCATCAAGAGTGACTTGAAACAGGTTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| 3UTR-3UTR TCA 90 bp | ATACAACCAAAAACGTATACACATTTCCCCATGGAACAAACCAATTCATTGCCCGGGTGGGAGGAGAAGTaGGAGAGAACAAACTTCCTA | + |
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Preference number: 2 (lower is better) Translates to: IQPKTYTHFPMEQTNSLPGWEEK*ERTNFL Trigger: TAGGAAGTTTGTTCTCTCTCACTTCTCCTCCCACCC...GGGCAATGAATTGGTTTGTTCCATGGGGAAATGTGTATACGTTTTTGGTTGTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| 3UTR CAA 90 bp | CACGTCTTTAAATATTTAATAGGCCTTTCTGATATCACTCTAGTTTaGGGAACGCAGCGAATCCAGTGCAACGACGCCTCTGTGAAAATC | + |
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Preference number: 2 (lower is better) Translates to: HVFKYLIGLSDITLV*GTQRIQCNDASVKI Trigger: GATTTTCACAGAGGCGTCGTTGCACTGGATTCGCTGCGTTCCCAAAACTAGAGTGATATCAGAAAGGCCTATTAAATATTTAAAGACGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| 3UTR-3UTR GCA 90 bp | ATACAGAGACTTGTACAGCCCATCATTTGGTCTTCTGAAGTGCAAGTGCACGTGAAATTAAAAGGAAATTaGACACCCTTTCGGTTAGCT | + |
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Preference number: 2 (lower is better) Translates to: IQRLVQPIIWSSEVQVHVKLKGN*TPFRLA Trigger: AGCTAACCGAAAGGGTGTGCAATTTCCTTTTAATTT...CACGTGCACTTGCACTTCAGAAGACCAAATGATGGGCTGTACAAGTCTCTGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| 3UTR-3UTR GCA 90 bp | TCATTTGGTCTTCTGAAGTGCAAGTGCACGTGGATCTGTACAAATGCAACTGGGAACAAACCAATTCATTaGCCCATCTTTTCTCCTTTT | + |
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Preference number: 2 (lower is better) Translates to: SFGLLKCKCTWICTNATGNKPIH*PIFSPF Trigger: AAAAGGAGAAAAGATGGGGCAATGAATTGGTTTGTT...CCCAGTTGCATTTGTACAGATCCACGTGCACTTGCACTTCAGAAGACCAAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| 3UTR CAA 90 bp | AACGACACAATTAATCAAATGGGTTCACCGAGTGTGTCTGCTTGCTaGCTTGTTCTAAACGCAAAAGCTCCAAGAGAGTTTCTTTGTTTT | + |
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Preference number: 2 (lower is better) Translates to: NDTINQMGSPSVSAC*LVLNAKAPREFLCF Trigger: AAAACAAAGAAACTCTCTTGGAGCTTTTGCGTTTAGAACAAGCAAGCAAGCAGACACACTCGGTGAACCCATTTGATTAATTGTGTCGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| 3UTR-3UTR CCA 90 bp | TGGGATACATATGAGACTGTAACAATAGTAGTTCTGTCTTTCAGAGGTCCTGCTACACAATTAATCAAATaGGTTCACCGAGTGTGTCTG | + |
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Preference number: 2 (lower is better) Translates to: WDTYETVTIVVLSFRGPATQLIK*VHRVCL Trigger: CAGACACACTCGGTGAACCCATTTGATTAATTGTGT...AGCAGGACCTCTGAAAGACAGAACTACTATTGTTACAGTCTCATATGTATCCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| 3UTR TCA 72 bp | AAATTGCACACCCTTTCGGTTAGCTTCCACCGAAGCTaGGAATCCCGTGCCAAGGCACTTCGCCCTAAATGT | + |
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Preference number: 3 (lower is better) Translates to: KLHTLSVSFHRS*ESRAKALRPKC Trigger: ACATTTAGGGCGAAGTGCCTTGGCACGGGATTCTCAGCTTCGGTGGAAGCTAACCGAAAGGGTGTGCAATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| 3UTR-3UTR CAA 90 bp | ATCATACAGAGACTTGTACAGCCCATCATTTGGTCTTCTGAAGTGCAAGTGCACACCGAGTGTGTCTGCTaGCTTGCTTGTTCTAAACGC | + |
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Preference number: 3 (lower is better) Translates to: IIQRLVQPIIWSSEVQVHTECVC*LACSKR Trigger: GCGTTTAGAACAAGCAAGCAAGCAGACACACTCGGT...GTGCACTTGCACTTCAGAAGACCAAATGATGGGCTGTACAAGTCTCTGTATGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| 3UTR GCA 72 bp | AGAGACTTGTACAGCCCATCATTTGGTCTTCTGAAGTaGAAGTGCACGTGGATCTGTACAAATGCAACTGGG | + |
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Preference number: 3 (lower is better) Translates to: RDLYSPSFGLLK*KCTWICTNATG Trigger: CCCAGTTGCATTTGTACAGATCCACGTGCACTTGCACTTCAGAAGACCAAATGATGGGCTGTACAAGTCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| 3UTR-3UTR CAA 90 bp | CAGAGACTTGTACAGCCCATCATTTGGTCTTCTGAAGTGCAAGTGCACGTGGATAGTGTGTCTGCTTGCTaGCTTGTTCTAAACGCAAAA | + |
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Preference number: 3 (lower is better) Translates to: QRLVQPIIWSSEVQVHVDSVSAC*LVLNAK Trigger: TTTTGCGTTTAGAACAAGCAAGCAAGCAGACACACT...ATCCACGTGCACTTGCACTTCAGAAGACCAAATGATGGGCTGTACAAGTCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| 3UTR GCA 72 bp | TTGTACAGCCCATCATTTGGTCTTCTGAAGTGCAAGTaGACGTGGATCTGTACAAATGCAACTGGGTTTGGT | + |
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Preference number: 3 (lower is better) Translates to: LYSPSFGLLKCK*TWICTNATGFG Trigger: ACCAAACCCAGTTGCATTTGTACAGATCCACGTGCACTTGCACTTCAGAAGACCAAATGATGGGCTGTACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| 3UTR TCA 72 bp | CATACAGAGACTTGTACAGCCCATCATTTGGTCTTCTaGAGTGCAAGTGCACGTGGATCTGTACAAATGCAA | + |
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Preference number: 3 (lower is better) Translates to: HTETCTAHHLVF*SASARGSVQMQ Trigger: TTGCATTTGTACAGATCCACGTGCACTTGCACTTCAGAAGACCAAATGATGGGCTGTACAAGTCTCTGTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| 3UTR GCA 72 bp | GACTGTAACAATAGTAGTTCTGTCTTTCAGAGGTCCTaGTTGTCATTAGCATCTGCCCAGAGGGATAAAGAC | + |
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Preference number: 3 (lower is better) Translates to: DCNNSSSVFQRS*LSLASAQRDKD Trigger: GTCTTTATCCCTCTGGGCAGATGCTAATGACAAGCAGGACCTCTGAAAGACAGAACTACTATTGTTACAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| 3UTR GCA 72 bp | ACAATTAATCAAATGGGTTCACCGAGTGTGTCTGCTTaGTTGCTTGTTCTAAACGCAAAAGCTCCAAGAGAG | + |
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Preference number: 3 (lower is better) Translates to: TINQMGSPSVSA*LLVLNAKAPRE Trigger: CTCTCTTGGAGCTTTTGCGTTTAGAACAAGCAAGCAAGCAGACACACTCGGTGAACCCATTTGATTAATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| 3UTR CCA 72 bp | TTCGCCCTAAATGTTGAAACGACACAATTAATCAAATaGGTTCACCGAGTGTGTCTGCTTGCTTGCTTGTTC | + |
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Preference number: 3 (lower is better) Translates to: FALNVETTQLIK*VHRVCLLACLF Trigger: GAACAAGCAAGCAAGCAGACACACTCGGTGAACCCATTTGATTAATTGTGTCGTTTCAACATTTAGGGCGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS-3UTR TCA 90 bp | CCCTCCTCAGAACTTCAGAGCTCCGCCAAAGGGACCACAACCTGTTTCAAGTCAGGGGCTCGATGGTGCTaGCGCTGTAGGCGGGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: PSSELQSSAKGTTTCFKSGARWC*RCRRGS Trigger: GGAGCCCCGCCTACAGCGTCAGCACCATCGAGCCCC...TGACTTGAAACAGGTTGTGGTCCCTTTGGCGGAGCTCTGAAGTTCTGAGGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS-3UTR GCA 90 bp | CCCTCCTCAGAACTTCAGAGCTCCGCCAAAGGGACCACAACCTGTTTCAAGTCAGGCGGCGGCTGCTGCTaGAGGTGGTGGTTGCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: PSSELQSSAKGTTTCFKSGGGCC*RWWLLL Trigger: CAGCAGCAACCACCACCTGCAGCAGCAGCCGCCGCC...TGACTTGAAACAGGTTGTGGTCCCTTTGGCGGAGCTCTGAAGTTCTGAGGAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS-3UTR GCA 90 bp | CCCTCCTCAGAACTTCAGAGCTCCGCCAAAGGGACCACAACCTGTTTCAAGTCATCCCCAGGCTGCATCTaGATCTGCGGAGGGGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: PSSELQSSAKGTTTCFKSSPGCI*ICGGGC Trigger: GCAGCCCCCTCCGCAGATGCAGATGCAGCCTGGGGA...TGACTTGAAACAGGTTGTGGTCCCTTTGGCGGAGCTCTGAAGTTCTGAGGAGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS-3UTR CCA 90 bp | ATGCAAATCGCCCTCCAGAAAGCCCTTCTGTCTTCCCCCACAGACAAGAAGCGAAAGTGGGGCGCACTCTaGGTTTGTTGGGCTGGCGGG | + |
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Preference number: 4 (lower is better) Translates to: MQIALQKALLSSPTDKKRKWGAL*VCWAGG Trigger: CCCGCCAGCCCAACAAACCCAGAGTGCGCCCCACTT...TCGCTTCTTGTCTGTGGGGGAAGACAGAAGGGCTTTCTGGAGGGCGATTTGCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS-3UTR TCA 90 bp | CCCTCCTCAGAACTTCAGAGCTCCGCCAAAGGGACCACAACCTGTTTCAAGTCACCCTCAGGTTCAGCCTaGGAAGTGTCAGGCCAGAGA | + |
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Preference number: 4 (lower is better) Translates to: PSSELQSSAKGTTTCFKSPSGSA*EVSGQR Trigger: TCTCTGGCCTGACACTTCTCAGGCTGAACCTGAGGG...TGACTTGAAACAGGTTGTGGTCCCTTTGGCGGAGCTCTGAAGTTCTGAGGAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS-3UTR GCA 90 bp | ATGCAAATCGCCCTCCAGAAAGCCCTTCTGTCTTCCCCCACAGACAAGAAGCGAGGTAGATGGGGTTCTTaGACATGTGGCCCAGGGGGT | + |
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Preference number: 4 (lower is better) Translates to: MQIALQKALLSSPTDKKRGRWGS*TCGPGG Trigger: ACCCCCTGGGCCACATGTGCAAGAACCCCATCTACC...TCGCTTCTTGTCTGTGGGGGAAGACAGAAGGGCTTTCTGGAGGGCGATTTGCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS-3UTR GCA 90 bp | GAAGTGAGAGAGAACAAACTTCCTATAACGTTGGGGTGTGCTAATCTCTCAACCGGCGGCGGCGGCTGCTaGTGCAGGTGGTGGTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: EVRENKLPITLGCANLSTGGGGC*CRWWLL Trigger: CAGCAACCACCACCTGCAGCAGCAGCCGCCGCCGCC...GGTTGAGAGATTAGCACACCCCAACGTTATAGGAAGTTTGTTCTCTCTCACTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS-3UTR CCA 90 bp | CACAACCTGTTTCAAGTCACTCTTGATGCAAATCGCCCTCCAGAAAGCCCTTCTCGGGAGTCTTCACCTTaGGCAGCGCAGGCCCGCGAT | + |
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Preference number: 4 (lower is better) Translates to: HNLFQVTLDANRPPESPSRESSP*AAQARD Trigger: ATCGCGGGCCTGCGCTGCCCAAGGTGAAGACTCCCG...AGAAGGGCTTTCTGGAGGGCGATTTGCATCAAGAGTGACTTGAAACAGGTTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS-3UTR CCA 90 bp | CAGAGACTTGTACAGCCCATCATTTGGTCTTCTGAAGTGCAAGTGCACGTGGATCTGGGTTTGTTGGGCTaGCGGGTCCCCTTAGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: QRLVQPIIWSSEVQVHVDLGLLG*RVPLGG Trigger: GCCTCCTAAGGGGACCCGCCAGCCCAACAAACCCAG...ATCCACGTGCACTTGCACTTCAGAAGACCAAATGATGGGCTGTACAAGTCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS-3UTR TCA 90 bp | TTCACCGAGTGTGTCTGCTTGCTTGCTTGTTCTAAACGCAAAAGCTCCAAGAGACCCGGGTGCAAATACTaGTGGGGGCGTCGCAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: FTECVCLLACSKRKSSKRPGCKY*WGRRRS Trigger: TGACCTGCGACGCCCCCATCAGTATTTGCACCCGGG...TCTCTTGGAGCTTTTGCGTTTAGAACAAGCAAGCAAGCAGACACACTCGGTGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS-3UTR GCA 90 bp | ATGCAAATCGCCCTCCAGAAAGCCCTTCTGTCTTCCCCCACAGACAAGAAGCGAGTAGATACCCCGTGGTaGTTAAAGGAGTCTGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: MQIALQKALLSSPTDKKRVDTPW*LKESVA Trigger: GGCCACAGACTCCTTTAAGCACCACGGGGTATCTAC...TCGCTTCTTGTCTGTGGGGGAAGACAGAAGGGCTTTCTGGAGGGCGATTTGCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS-3UTR GCA 90 bp | CAGAGACTTGTACAGCCCATCATTTGGTCTTCTGAAGTGCAAGTGCACGTGGATAAGCGATCAGCGTCCTaGACCGGCGACAGTAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: QRLVQPIIWSSEVQVHVDKRSAS*TGDSRS Trigger: GGACCTACTGTCGCCGGTGCAGGACGCTGATCGCTT...ATCCACGTGCACTTGCACTTCAGAAGACCAAATGATGGGCTGTACAAGTCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS-3UTR CCA 90 bp | CCCTCCTCAGAACTTCAGAGCTCCGCCAAAGGGACCACAACCTGTTTCAAGTCACCCGGTCCTGGATCATaGAGATGCGGTTATTACCCA | + |
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Preference number: 4 (lower is better) Translates to: PSSELQSSAKGTTTCFKSPGPGS*RCGYYP Trigger: TGGGTAATAACCGCATCTCCATGATCCAGGACCGGG...TGACTTGAAACAGGTTGTGGTCCCTTTGGCGGAGCTCTGAAGTTCTGAGGAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS-3UTR CCA 90 bp | CCAGTGCAACGACGCCTCTGTGAAAATCATAGGCTAAATAGTGAAGGAAAGAGGGCGGGGCTCCTCAAATaGTGGCTTTCCCGCCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: PVQRRLCENHRLNSEGKRAGLLK*WLSRLS Trigger: GGAGAGGCGGGAAAGCCACCATTTGAGGAGCCCCGC...CCTCTTTCCTTCACTATTTAGCCTATGATTTTCACAGAGGCGTCGTTGCACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS-3UTR GCA 90 bp | CAAATGGGTTCACCGAGTGTGTCTGCTTGCTTGCTTGTTCTAAACGCAAAAGCTCAGCCTGCTCTCCCCTaGACCCGGGTGCAAATACTG | + |
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Preference number: 4 (lower is better) Translates to: QMGSPSVSACLLVLNAKAQPALP*TRVQIL Trigger: CAGTATTTGCACCCGGGTGCAGGGGAGAGCAGGCTG...AGCTTTTGCGTTTAGAACAAGCAAGCAAGCAGACACACTCGGTGAACCCATTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS-3UTR GCA 90 bp | ATACAACCAAAAACGTATACACATTTCCCCATGGAACAAACCAATTCATTGCCCCCGGTTCCCGCAGCCTaGTCTCCCCTGCACCCGGGT | + |
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Preference number: 4 (lower is better) Translates to: IQPKTYTHFPMEQTNSLPPVPAA*SPLHPG Trigger: ACCCGGGTGCAGGGGAGAGCAGGCTGCGGGAACCGG...GGGCAATGAATTGGTTTGTTCCATGGGGAAATGTGTATACGTTTTTGGTTGTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS-3UTR CCA 90 bp | TCATTTGGTCTTCTGAAGTGCAAGTGCACGTGGATCTGTACAAATGCAACTGGGTGGGATTGTAGGGCTTaGGCTGCAGCTCCGCGATGC | + |
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Preference number: 4 (lower is better) Translates to: SFGLLKCKCTWICTNATGWDCRA*AAAPRC Trigger: GCATCGCGGAGCTGCAGCCCAAGCCCTACAATCCCA...CCCAGTTGCATTTGTACAGATCCACGTGCACTTGCACTTCAGAAGACCAAATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS-3UTR CCA 90 bp | TCATTTGGTCTTCTGAAGTGCAAGTGCACGTGGATCTGTACAAATGCAACTGGGTGGATGGTACCTGGATaGAAGAGGGCGTGGGCGTGG | + |
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Preference number: 4 (lower is better) Translates to: SFGLLKCKCTWICTNATGWMVPG*KRAWAW Trigger: CCACGCCCACGCCCTCTTCCATCCAGGTACCATCCA...CCCAGTTGCATTTGTACAGATCCACGTGCACTTGCACTTCAGAAGACCAAATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS-3UTR CCA 90 bp | TCATTTGGTCTTCTGAAGTGCAAGTGCACGTGGATCTGTACAAATGCAACTGGGGTCCTGGATGGTACCTaGATGGAAGAGGGCGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: SFGLLKCKCTWICTNATGVLDGT*MEEGVG Trigger: GCCCACGCCCTCTTCCATCCAGGTACCATCCAGGAC...CCCAGTTGCATTTGTACAGATCCACGTGCACTTGCACTTCAGAAGACCAAATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS-3UTR GCA 90 bp | CCCTCCTCAGAACTTCAGAGCTCCGCCAAAGGGACCACAACCTGTTTCAAGTCATTGAGGATAAGCACCTaGAGCATGTGCAGTTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: PSSELQSSAKGTTTCFKSLRIST*SMCSFP Trigger: TGGGAAACTGCACATGCTGCAGGTGCTTATCCTCAA...TGACTTGAAACAGGTTGTGGTCCCTTTGGCGGAGCTCTGAAGTTCTGAGGAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS-3UTR GCA 90 bp | CCCTCCTCAGAACTTCAGAGCTCCGCCAAAGGGACCACAACCTGTTTCAAGTCACCCAGATCAGAGATCTaGAGGTTGCAAGTACATGCT | + |
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Preference number: 4 (lower is better) Translates to: PSSELQSSAKGTTTCFKSPRSEI*RLQVHA Trigger: AGCATGTACTTGCAACCTGCAGATCTCTGATCTGGG...TGACTTGAAACAGGTTGTGGTCCCTTTGGCGGAGCTCTGAAGTTCTGAGGAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS-3UTR GCA 90 bp | ATACAACCAAAAACGTATACACATTTCCCCATGGAACAAACCAATTCATTGCCCGCAGGCCCGCGATGGTaGACGTGTGCGTGTGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: IQPKTYTHFPMEQTNSLPAGPRW*TCACGW Trigger: CCACCCACACGCACACGTGCACCATCGCGGGCCTGC...GGGCAATGAATTGGTTTGTTCCATGGGGAAATGTGTATACGTTTTTGGTTGTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS-3UTR GCA 90 bp | AGTGATGTGCCTAGTTTACACAAATGTTTCCCGCGTGTAAAATTAAAAGGAAATTGCGGAGGGGGCTGCTaGTGGGGCTGTTGCGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: SDVPSLHKCFPRVKLKGNCGGGC*WGCCGG Trigger: GCCGCCGCAACAGCCCCAGCAGCAGCCCCCTCCGCA...ATTTCCTTTTAATTTTACACGCGGGAAACATTTGTGTAAACTAGGCACATCACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS-3UTR GCA 90 bp | TGGGATACATATGAGACTGTAACAATAGTAGTTCTGTCTTTCAGAGGTCCTGCTGGCTGCATCTGCATCTaGGGAGGGGGCTGCTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: WDTYETVTIVVLSFRGPAGCICI*GGGCCW Trigger: CCAGCAGCAGCCCCCTCCGCAGATGCAGATGCAGCC...AGCAGGACCTCTGAAAGACAGAACTACTATTGTTACAGTCTCATATGTATCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS-3UTR CCA 90 bp | CACAACCTGTTTCAAGTCACTCTTGATGCAAATCGCCCTCCAGAAAGCCCTTCTGGAGGTCTAGACCGGTaGCTTCCAGGAAGTCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HNLFQVTLDANRPPESPSGGLDR*LPGSLF Trigger: GAACAGACTTCCTGGAAGCCACCGGTCTAGACCTCC...AGAAGGGCTTTCTGGAGGGCGATTTGCATCAAGAGTGACTTGAAACAGGTTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR CCA 90 bp | CAGAGACTTGTACAGCCCATCATTTGGTCTTCTGAAGTGCAAGTGCACGTGGATCCAAAGGCCCGGTCCTaGATCATGGAGATGCGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: QRLVQPIIWSSEVQVHVDPKARS*IMEMRL Trigger: TAACCGCATCTCCATGATCCAGGACCGGGCCTTTGG...ATCCACGTGCACTTGCACTTCAGAAGACCAAATGATGGGCTGTACAAGTCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR CCA 90 bp | CACAACCTGTTTCAAGTCACTCTTGATGCAAATCGCCCTCCAGAAAGCCCTTCTTCGCTGCGTTCGTCCTaGATGGTACCTGGATGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HNLFQVTLDANRPPESPSSLRSS*MVPGWK Trigger: CTTCCATCCAGGTACCATCCAGGACGAACGCAGCGA...AGAAGGGCTTTCTGGAGGGCGATTTGCATCAAGAGTGACTTGAAACAGGTTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR TCA 90 bp | ATGCAAATCGCCCTCCAGAAAGCCCTTCTGTCTTCCCCCACAGACAAGAAGCGATTCTGCGCACAACAGTaGTATAGTTCTCTGTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: MQIALQKALLSSPTDKKRFCAQQ*YSSLSG Trigger: ACCTGACAGAGAACTATATCACTGTTGTGCGCAGAA...TCGCTTCTTGTCTGTGGGGGAAGACAGAAGGGCTTTCTGGAGGGCGATTTGCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR GCA 90 bp | CACAACCTGTTTCAAGTCACTCTTGATGCAAATCGCCCTCCAGAAAGCCCTTCTCCGCATGTAGGTCTCTaGGAATTTCTTGGGCGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HNLFQVTLDANRPPESPSPHVGL*EFLGRL Trigger: AAGGCGCCCAAGAAATTCGCAGAGACCTACATGCGG...AGAAGGGCTTTCTGGAGGGCGATTTGCATCAAGAGTGACTTGAAACAGGTTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR CCA 90 bp | ATGCAAATCGCCCTCCAGAAAGCCCTTCTGTCTTCCCCCACAGACAAGAAGCGACAAAACTCCACTCACTaGCAAGGAAGTGAAGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: MQIALQKALLSSPTDKKRQNSTH*QGSEAV Trigger: AACAGCTTCACTTCCTTGCCAGTGAGTGGAGTTTTG...TCGCTTCTTGTCTGTGGGGGAAGACAGAAGGGCTTTCTGGAGGGCGATTTGCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR CCA 90 bp | ATACAGAGACTTGTACAGCCCATCATTTGGTCTTCTGAAGTGCAAGTGCACGTGCTCGAGACCGGTAGATaGGGTTCTTGCACATGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: IQRLVQPIIWSSEVQVHVLETGR*GSCTCG Trigger: GCCACATGTGCAAGAACCCCATCTACCGGTCTCGAG...CACGTGCACTTGCACTTCAGAAGACCAAATGATGGGCTGTACAAGTCTCTGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR TCA 90 bp | TCATTTGGTCTTCTGAAGTGCAAGTGCACGTGGATCTGTACAAATGCAACTGGGCTAACACCCCCACTTTaGGCTGCTCAATCCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SFGLLKCKCTWICTNATGLTPPL*AAQSTA Trigger: AGCTGTGGATTGAGCAGCTCAAAGTGGGGGTGTTAG...CCCAGTTGCATTTGTACAGATCCACGTGCACTTGCACTTCAGAAGACCAAATGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR GCA 90 bp | ATACAGAGACTTGTACAGCCCATCATTTGGTCTTCTGAAGTGCAAGTGCACGTGCCCCTCAAGTCCAAGTaGGTTAAGGGCACAAAACGG | + |
|
Preference number: 4 (lower is better) Translates to: IQRLVQPIIWSSEVQVHVPLKSK*VKGTKR Trigger: CCGTTTTGTGCCCTTAACGCACTTGGACTTGAGGGG...CACGTGCACTTGCACTTCAGAAGACCAAATGATGGGCTGTACAAGTCTCTGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR GCA 90 bp | TTCACCGAGTGTGTCTGCTTGCTTGCTTGTTCTAAACGCAAAAGCTCCAAGAGAAAGTCTTTAGAGGGCTaGCTAGAAGTGGGGCGCACT | + |
|
Preference number: 4 (lower is better) Translates to: FTECVCLLACSKRKSSKRKSLEG*LEVGRT Trigger: AGTGCGCCCCACTTCTAGGCAGCCCTCTAAAGACTT...TCTCTTGGAGCTTTTGCGTTTAGAACAAGCAAGCAAGCAGACACACTCGGTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR GCA 90 bp | CACAACCTGTTTCAAGTCACTCTTGATGCAAATCGCCCTCCAGAAAGCCCTTCTTGGTCTGGTAGGCTATaGTGGGGCCATAGTTACTGT | + |
|
Preference number: 4 (lower is better) Translates to: HNLFQVTLDANRPPESPSWSGRL*WGHSYC Trigger: ACAGTAACTATGGCCCCAGCATAGCCTACCAGACCA...AGAAGGGCTTTCTGGAGGGCGATTTGCATCAAGAGTGACTTGAAACAGGTTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR GCA 90 bp | ATCATACAGAGACTTGTACAGCCCATCATTTGGTCTTCTGAAGTGCAAGTGCACCAATCCACAGCTTCATaGCCACCACGTCGCAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: IIQRLVQPIIWSSEVQVHQSTAS*PPRRRY Trigger: GTACCTGCGACGTGGTGGGCATGAAGCTGTGGATTG...GTGCACTTGCACTTCAGAAGACCAAATGATGGGCTGTACAAGTCTCTGTATGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR CCA 90 bp | CAGAGACTTGTACAGCCCATCATTTGGTCTTCTGAAGTGCAAGTGCACGTGGATAGACACCGGAAGGCATaGCCTGCAGTTGGTTGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: QRLVQPIIWSSEVQVHVDRHRKA*PAVGCY Trigger: ATAACAACCAACTGCAGGCCATGCCTTCCGGTGTCT...ATCCACGTGCACTTGCACTTCAGAAGACCAAATGATGGGCTGTACAAGTCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR CCA 90 bp | TGGGATACATATGAGACTGTAACAATAGTAGTTCTGTCTTTCAGAGGTCCTGCTGGGCTCCTCAAATGGTaGCTTTCCCGCCTCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: WDTYETVTIVVLSFRGPAGLLKW*LSRLSS Trigger: GGAGGAGAGGCGGGAAAGCCACCATTTGAGGAGCCC...AGCAGGACCTCTGAAAGACAGAACTACTATTGTTACAGTCTCATATGTATCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR TCA 90 bp | GAAGTGAGAGAGAACAAACTTCCTATAACGTTGGGGTGTGCTAATCTCTCAACCTCACTGGCAAGGAAGTaGAGCTGTTACCCCTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: EVRENKLPITLGCANLSTSLARK*SCYPSG Trigger: ACCTGAGGGGTAACAGCTTCACTTCCTTGCCAGTGA...GGTTGAGAGATTAGCACACCCCAACGTTATAGGAAGTTTGTTCTCTCTCACTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR TCA 90 bp | ATACAGAGACTTGTACAGCCCATCATTTGGTCTTCTGAAGTGCAAGTGCACGTGCGCTGTACTGCATGTTaGAAGAGCTCACGTCGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: IQRLVQPIIWSSEVQVHVRCTAC*KSSRRN Trigger: ATTCCGACGTGAGCTCTTTCAACATGCAGTACAGCG...CACGTGCACTTGCACTTCAGAAGACCAAATGATGGGCTGTACAAGTCTCTGTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR GCA 90 bp | CCAGTGCAACGACGCCTCTGTGAAAATCATAGGCTAAATAGTGAAGGAAAGAGGCCTGGATCATGGAGATaGGGTTATTACCCAGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PVQRRLCENHRLNSEGKRPGSWR*GYYPGA Trigger: TGCACCTGGGTAATAACCGCATCTCCATGATCCAGG...CCTCTTTCCTTCACTATTTAGCCTATGATTTTCACAGAGGCGTCGTTGCACTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR GCA 90 bp | TCATTTGGTCTTCTGAAGTGCAAGTGCACGTGGATCTGTACAAATGCAACTGGGGCCTCTCAATCCTGTTaGCATTCAGATAGAGGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: SFGLLKCKCTWICTNATGASQSC*HSDRGV Trigger: GACGCCTCTATCTGAATGGCAACAGGATTGAGAGGC...CCCAGTTGCATTTGTACAGATCCACGTGCACTTGCACTTCAGAAGACCAAATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR GCA 90 bp | ATACAGAGACTTGTACAGCCCATCATTTGGTCTTCTGAAGTGCAAGTGCACGTGCCGGAAGGCATGGCCTaGAGTTGGTTGTTATTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: IQRLVQPIIWSSEVQVHVPEGMA*SWLLFK Trigger: CTTGAATAACAACCAACTGCAGGCCATGCCTTCCGG...CACGTGCACTTGCACTTCAGAAGACCAAATGATGGGCTGTACAAGTCTCTGTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR GCA 90 bp | GTCTTCCCCCACAGACAAGAAGCGAAAGTGATGTGCCTAGTTTACACAAATGTTCAGCACGAAAAGGCCTaGTGCCACAAAGACGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: VFPHRQEAKVMCLVYTNVQHEKA*CHKDGH Trigger: ATGTCCGTCTTTGTGGCAGCAGGCCTTTTCGTGCTG...AACATTTGTGTAAACTAGGCACATCACTTTCGCTTCTTGTCTGTGGGGGAAGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR CCA 90 bp | CCAGTGCAACGACGCCTCTGTGAAAATCATAGGCTAAATAGTGAAGGAAAGAGGCTGTTCCAAAGTTACTaGGGGGCAGCAAACGTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PVQRRLCENHRLNSEGKRLFQSY*GAANVH Trigger: ATGCACGTTTGCTGCCCCCCAGTAACTTTGGAACAG...CCTCTTTCCTTCACTATTTAGCCTATGATTTTCACAGAGGCGTCGTTGCACTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR CCA 90 bp | ATACAGAGACTTGTACAGCCCATCATTTGGTCTTCTGAAGTGCAAGTGCACGTGTTACAGAAGCTGGGGTaGTATGTAGATACCCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: IQRLVQPIIWSSEVQVHVLQKLG*YVDTPW Trigger: CCACGGGGTATCTACATACCACCCCAGCTTCTGTAA...CACGTGCACTTGCACTTCAGAAGACCAAATGATGGGCTGTACAAGTCTCTGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR CCA 90 bp | ATACAGAGACTTGTACAGCCCATCATTTGGTCTTCTGAAGTGCAAGTGCACGTGCTGGTGTGGTCGCTCTaGTTCTTTTTCCTCCGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: IQRLVQPIIWSSEVQVHVLVWSL*FFFLRF Trigger: GAAACGGAGGAAAAAGAACCAGAGCGACCACACCAG...CACGTGCACTTGCACTTCAGAAGACCAAATGATGGGCTGTACAAGTCTCTGTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR TCA 90 bp | TGGGATACATATGAGACTGTAACAATAGTAGTTCTGTCTTTCAGAGGTCCTGCTATGTGGCCCAGGGGGTaGGGGATGTATTCATACACG | + |
|
Preference number: 4 (lower is better) Translates to: WDTYETVTIVVLSFRGPAMWPRG*GMYSYT Trigger: CGTGTATGAATACATCCCTCACCCCCTGGGCCACAT...AGCAGGACCTCTGAAAGACAGAACTACTATTGTTACAGTCTCATATGTATCCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR GCA 90 bp | CCAGTGCAACGACGCCTCTGTGAAAATCATAGGCTAAATAGTGAAGGAAAGAGGAGCACCTGCAGCATGTaGAGTTTCCCAAAAGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: PVQRRLCENHRLNSEGKRSTCSM*SFPKAL Trigger: CAATGCTTTTGGGAAACTGCACATGCTGCAGGTGCT...CCTCTTTCCTTCACTATTTAGCCTATGATTTTCACAGAGGCGTCGTTGCACTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR GCA 90 bp | CAAATGGGTTCACCGAGTGTGTCTGCTTGCTTGCTTGTTCTAAACGCAAAAGCTCCATACACGCTGTACTaGATGTTGAAAGAGCTCACG | + |
|
Preference number: 4 (lower is better) Translates to: QMGSPSVSACLLVLNAKAPYTLY*MLKELT Trigger: CGTGAGCTCTTTCAACATGCAGTACAGCGTGTATGG...AGCTTTTGCGTTTAGAACAAGCAAGCAAGCAGACACACTCGGTGAACCCATTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR CCA 90 bp | TCATTTGGTCTTCTGAAGTGCAAGTGCACGTGGATCTGTACAAATGCAACTGGGCAAGAGGTGATAGATTaGGAAACGGGGAGGGCTAAT | + |
|
Preference number: 4 (lower is better) Translates to: SFGLLKCKCTWICTNATGQEVID*ETGRAN Trigger: ATTAGCCCTCCCCGTTTCCCAATCTATCACCTCTTG...CCCAGTTGCATTTGTACAGATCCACGTGCACTTGCACTTCAGAAGACCAAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR CCA 90 bp | CAAATGGGTTCACCGAGTGTGTCTGCTTGCTTGCTTGTTCTAAACGCAAAAGCTTCAAAAGTCCCAGCCTaGATCTCACGGATGAGATTG | + |
|
Preference number: 4 (lower is better) Translates to: QMGSPSVSACLLVLNAKASKVPA*ISRMRL Trigger: CAATCTCATCCGTGAGATCCAGGCTGGGACTTTTGA...AGCTTTTGCGTTTAGAACAAGCAAGCAAGCAGACACACTCGGTGAACCCATTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR CCA 90 bp | ATACAACCAAAAACGTATACACATTTCCCCATGGAACAAACCAATTCATTGCCCGGATGGAAGAGGGCGTaGGCGTGGAAACCACCACAT | + |
|
Preference number: 4 (lower is better) Translates to: IQPKTYTHFPMEQTNSLPGWKRA*AWKPPH Trigger: ATGTGGTGGTTTCCACGCCCACGCCCTCTTCCATCC...GGGCAATGAATTGGTTTGTTCCATGGGGAAATGTGTATACGTTTTTGGTTGTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR CCA 90 bp | GTCTTCCCCCACAGACAAGAAGCGAAAGTGATGTGCCTAGTTTACACAAATGTTTCACGTCGGAATTGTTaGTACTGGTGTGGTCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VFPHRQEAKVMCLVYTNVSRRNC*YWCGRS Trigger: AGAGCGACCACACCAGTACCAACAATTCCGACGTGA...AACATTTGTGTAAACTAGGCACATCACTTTCGCTTCTTGTCTGTGGGGGAAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR TCA 90 bp | ATACAACCAAAAACGTATACACATTTCCCCATGGAACAAACCAATTCATTGCCCATCGCCCACAAGGGCTaGGTAGGAGATGCTGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: IQPKTYTHFPMEQTNSLPIAHKG*VGDAVQ Trigger: TTGGACAGCATCTCCTACTCAGCCCTTGTGGGCGAT...GGGCAATGAATTGGTTTGTTCCATGGGGAAATGTGTATACGTTTTTGGTTGTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR CCA 90 bp | TTCACCGAGTGTGTCTGCTTGCTTGCTTGTTCTAAACGCAAAAGCTCCAAGAGATTGTTGGTACTGGTGTaGTCGCTCTGGTTCTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FTECVCLLACSKRKSSKRLLVLV*SLWFFF Trigger: GAAAAAGAACCAGAGCGACCACACCAGTACCAACAA...TCTCTTGGAGCTTTTGCGTTTAGAACAAGCAAGCAAGCAGACACACTCGGTGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR CCA 90 bp | GTCTTCCCCCACAGACAAGAAGCGAAAGTGATGTGCCTAGTTTACACAAATGTTTCGCAGGTCATAGTTTaGGGAGAAAGTGTAAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VFPHRQEAKVMCLVYTNVSQVIV*GESVSS Trigger: GCTGCTTACACTTTCTCCCCAAACTATGACCTGCGA...AACATTTGTGTAAACTAGGCACATCACTTTCGCTTCTTGTCTGTGGGGGAAGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| 3UTR CAA 72 bp | GGAGGAGAAGTGAGAGAGAACAAACTTCCTATAACGTaGGGGTGTGCTAATCTCTCAACCAATGCTCTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GGEVRENKLPIT*GCANLSTNALR Trigger: CCTTAGAGCATTGGTTGAGAGATTAGCACACCCCAACGTTATAGGAAGTTTGTTCTCTCTCACTTCTCCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| 3UTR CAA 72 bp | CATCTGCCCAGAGGGATAAAGACATCATACAGAGACTaGTACAGCCCATCATTTGGTCTTCTGAAGTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: HLPRGIKTSYRD*YSPSFGLLKCK Trigger: CTTGCACTTCAGAAGACCAAATGATGGGCTGTACAAGTCTCTGTATGATGTCTTTATCCCTCTGGGCAGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR TCA 90 bp | TGGGATACATATGAGACTGTAACAATAGTAGTTCTGTCTTTCAGAGGTCCTGCTCCTGGATCTCACGGATaGGATTGTACTGGAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: WDTYETVTIVVLSFRGPAPGSHG*DCTGGR Trigger: TCTTCCTCCAGTACAATCTCATCCGTGAGATCCAGG...AGCAGGACCTCTGAAAGACAGAACTACTATTGTTACAGTCTCATATGTATCCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR GCA 90 bp | ATCATACAGAGACTTGTACAGCCCATCATTTGGTCTTCTGAAGTGCAAGTGCACGCAAATGCTAGAGTCTaGAGCATCCAGCTATGCATT | + |
|
Preference number: 4 (lower is better) Translates to: IIQRLVQPIIWSSEVQVHANARV*SIQLCI Trigger: AATGCATAGCTGGATGCTGCAGACTCTAGCATTTGC...GTGCACTTGCACTTCAGAAGACCAAATGATGGGCTGTACAAGTCTCTGTATGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR GCA 90 bp | GAAGTGAGAGAGAACAAACTTCCTATAACGTTGGGGTGTGCTAATCTCTCAACCCTTGGACAAAGTTCCTaGTTGGATACCTCGTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: EVRENKLPITLGCANLSTLGQSS*LDTSSK Trigger: TTTGGACGAGGTATCCAAGCAGGAACTTTGTCCAAG...GGTTGAGAGATTAGCACACCCCAACGTTATAGGAAGTTTGTTCTCTCTCACTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR GCA 90 bp | GAAGTGAGAGAGAACAAACTTCCTATAACGTTGGGGTGTGCTAATCTCTCAACCTGTCTGGCTCTAAAATaGCCCTGTAAAAGCGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: EVRENKLPITLGCANLSTCLALK*PCKSDQ Trigger: CTGATCGCTTTTACAGGGGCATTTTAGAGCCAGACA...GGTTGAGAGATTAGCACACCCCAACGTTATAGGAAGTTTGTTCTCTCTCACTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR CCA 90 bp | ATACAGAGACTTGTACAGCCCATCATTTGGTCTTCTGAAGTGCAAGTGCACGTGCCCCATAATAATCGATaGTTTCTGCACAGGAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: IQRLVQPIIWSSEVQVHVPHNNR*FLHRKG Trigger: TCCTTTCCTGTGCAGAAACCATCGATTATTATGGGG...CACGTGCACTTGCACTTCAGAAGACCAAATGATGGGCTGTACAAGTCTCTGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR CCA 90 bp | TGGGATACATATGAGACTGTAACAATAGTAGTTCTGTCTTTCAGAGGTCCTGCTTCTGGTAGGCTATGCTaGGGCCATAGTTACTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: WDTYETVTIVVLSFRGPASGRLC*GHSYCS Trigger: GCTACAGTAACTATGGCCCCAGCATAGCCTACCAGA...AGCAGGACCTCTGAAAGACAGAACTACTATTGTTACAGTCTCATATGTATCCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR TCA 90 bp | GAAGTGAGAGAGAACAAACTTCCTATAACGTTGGGGTGTGCTAATCTCTCAACCAGTCCGGCTCAACATTaGGTTTTGCTTTTAACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EVRENKLPITLGCANLSTSPAQH*VLLLTP Trigger: TGGAGTTAAAAGCAAAACTCAATGTTGAGCCGGACT...GGTTGAGAGATTAGCACACCCCAACGTTATAGGAAGTTTGTTCTCTCTCACTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR GCA 90 bp | GAAGTGAGAGAGAACAAACTTCCTATAACGTTGGGGTGTGCTAATCTCTCAACCATAATCGATGGTTTCTaGACAGGAAAGGACGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: EVRENKLPITLGCANLSTIIDGF*TGKDER Trigger: TCTCTCGTCCTTTCCTGTGCAGAAACCATCGATTAT...GGTTGAGAGATTAGCACACCCCAACGTTATAGGAAGTTTGTTCTCTCTCACTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR CCA 90 bp | TGGGATACATATGAGACTGTAACAATAGTAGTTCTGTCTTTCAGAGGTCCTGCTGACAAAGTTCCTGCTTaGATACCTCGTCCAAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: WDTYETVTIVVLSFRGPADKVPA*IPRPNP Trigger: GGGATTTGGACGAGGTATCCAAGCAGGAACTTTGTC...AGCAGGACCTCTGAAAGACAGAACTACTATTGTTACAGTCTCATATGTATCCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR CCA 90 bp | CAAATGGGTTCACCGAGTGTGTCTGCTTGCTTGCTTGTTCTAAACGCAAAAGCTAGAAATGAGTTTCCTTaGACAAAGTTCCTGCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QMGSPSVSACLLVLNAKARNEFP*TKFLLG Trigger: TCCAAGCAGGAACTTTGTCCAAGGAAACTCATTTCT...AGCTTTTGCGTTTAGAACAAGCAAGCAAGCAGACACACTCGGTGAACCCATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR CCA 90 bp | AGTGATGTGCCTAGTTTACACAAATGTTTCCCGCGTGTAAAATTAAAAGGAAATAAGGCACCGGGGATTTaGTCTGGTAGGCTATGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SDVPSLHKCFPRVKLKGNKAPGI*SGRLCW Trigger: CCAGCATAGCCTACCAGACCAAATCCCCGGTGCCTT...ATTTCCTTTTAATTTTACACGCGGGAAACATTTGTGTAAACTAGGCACATCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR CCA 90 bp | ATACAACCAAAAACGTATACACATTTCCCCATGGAACAAACCAATTCATTGCCCCGGAATTGTTGGTACTaGTGTGGTCGCTCTGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IQPKTYTHFPMEQTNSLPRNCWY*CGRSGS Trigger: AGAACCAGAGCGACCACACCAGTACCAACAATTCCG...GGGCAATGAATTGGTTTGTTCCATGGGGAAATGTGTATACGTTTTTGGTTGTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| 3UTR CAA 72 bp | AAATATTTAATAGGCCTTTCTGATATCACTCTAGTTTaGGGAACGCAGCGAATCCAGTGCAACGACGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KYLIGLSDITLV*GTQRIQCNDAS Trigger: AGAGGCGTCGTTGCACTGGATTCGCTGCGTTCCCAAAACTAGAGTGATATCAGAAAGGCCTATTAAATATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR CCA 90 bp | CAAATGGGTTCACCGAGTGTGTCTGCTTGCTTGCTTGTTCTAAACGCAAAAGCTAACGGAAAAGATTGTTaGGTAAACCTGACAAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: QMGSPSVSACLLVLNAKANGKDC*VNLTRD Trigger: ATCTCTTGTCAGGTTTACCCAACAATCTTTTCCGTT...AGCTTTTGCGTTTAGAACAAGCAAGCAAGCAGACACACTCGGTGAACCCATTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR CCA 90 bp | TGGGATACATATGAGACTGTAACAATAGTAGTTCTGTCTTTCAGAGGTCCTGCTTCAGGTACATTTTCTTaGGATTGTAGGGCTTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: WDTYETVTIVVLSFRGPASGTFS*DCRAWA Trigger: AGCCCAAGCCCTACAATCCCAAGAAAATGTACCTGA...AGCAGGACCTCTGAAAGACAGAACTACTATTGTTACAGTCTCATATGTATCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR CCA 90 bp | ATACAACCAAAAACGTATACACATTTCCCCATGGAACAAACCAATTCATTGCCCCGGATGAGATTGTACTaGAGGAAGAGATACTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: IQPKTYTHFPMEQTNSLPRMRLY*RKRYCR Trigger: CCTGCAGTATCTCTTCCTCCAGTACAATCTCATCCG...GGGCAATGAATTGGTTTGTTCCATGGGGAAATGTGTATACGTTTTTGGTTGTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR CCA 90 bp | TGGGATACATATGAGACTGTAACAATAGTAGTTCTGTCTTTCAGAGGTCCTGCTGGCATGGCCTGCAGTTaGTTGTTATTCAAGAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: WDTYETVTIVVLSFRGPAGMACS*LLFKNS Trigger: GCTATTCTTGAATAACAACCAACTGCAGGCCATGCC...AGCAGGACCTCTGAAAGACAGAACTACTATTGTTACAGTCTCATATGTATCCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR CCA 90 bp | TGGGATACATATGAGACTGTAACAATAGTAGTTCTGTCTTTCAGAGGTCCTGCTTCTCTGCGAATTTCTTaGGCGCCTTACAGATCACTT | + |
|
Preference number: 4 (lower is better) Translates to: WDTYETVTIVVLSFRGPASLRIS*APYRSL Trigger: AAGTGATCTGTAAGGCGCCCAAGAAATTCGCAGAGA...AGCAGGACCTCTGAAAGACAGAACTACTATTGTTACAGTCTCATATGTATCCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR CCA 90 bp | AGTGATGTGCCTAGTTTACACAAATGTTTCCCGCGTGTAAAATTAAAAGGAAATATGTATTCATACACGTaGCCCGCGGGAGTCTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: SDVPSLHKCFPRVKLKGNMYSYT*PAGVFT Trigger: GGTGAAGACTCCCGCGGGCCACGTGTATGAATACAT...ATTTCCTTTTAATTTTACACGCGGGAAACATTTGTGTAAACTAGGCACATCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| 3UTR CAA 72 bp | ATTAATCAAATGGGTTCACCGAGTGTGTCTGCTTGCTaGCTTGTTCTAAACGCAAAAGCTCCAAGAGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: INQMGSPSVSAC*LVLNAKAPREF Trigger: AAACTCTCTTGGAGCTTTTGCGTTTAGAACAAGCAAGCAAGCAGACACACTCGGTGAACCCATTTGATTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR GCA 90 bp | AGTGATGTGCCTAGTTTACACAAATGTTTCCCGCGTGTAAAATTAAAAGGAAATACCCCCACTTTGAGCTaGTCAATCCACAGCTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: SDVPSLHKCFPRVKLKGNTPTLS*SIHSFM Trigger: CATGAAGCTGTGGATTGAGCAGCTCAAAGTGGGGGT...ATTTCCTTTTAATTTTACACGCGGGAAACATTTGTGTAAACTAGGCACATCACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR TCA 90 bp | AGTGATGTGCCTAGTTTACACAAATGTTTCCCGCGTGTAAAATTAAAAGGAAATATGAGGGAAGTCAGCTaGTCCAAAACTCCACTCACT | + |
|
Preference number: 4 (lower is better) Translates to: SDVPSLHKCFPRVKLKGNMREVS*SKTPLT Trigger: AGTGAGTGGAGTTTTGGATCAGCTGACTTCCCTCAT...ATTTCCTTTTAATTTTACACGCGGGAAACATTTGTGTAAACTAGGCACATCACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR GCA 90 bp | AGTGATGTGCCTAGTTTACACAAATGTTTCCCGCGTGTAAAATTAAAAGGAAATTTCCTCACAAGGACATaGATTGTCACAGATTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SDVPSLHKCFPRVKLKGNFLTRT*IVTDFP Trigger: GGGGAAATCTGTGACAATGCATGTCCTTGTGAGGAA...ATTTCCTTTTAATTTTACACGCGGGAAACATTTGTGTAAACTAGGCACATCACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR GCA 90 bp | AGTGATGTGCCTAGTTTACACAAATGTTTCCCGCGTGTAAAATTAAAAGGAAATCAGGTTGCAAGTACATaGTGTAGGACATTCCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SDVPSLHKCFPRVKLKGNQVAST*CRTFQR Trigger: CCTTTGGAATGTCCTACAGCATGTACTTGCAACCTG...ATTTCCTTTTAATTTTACACGCGGGAAACATTTGTGTAAACTAGGCACATCACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR CCA 90 bp | ATACAACCAAAAACGTATACACATTTCCCCATGGAACAAACCAATTCATTGCCCTTATTATTGTTTAGATaGAGTCGCCTCAAACCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: IQPKTYTHFPMEQTNSLPLLLFR*SRLKPL Trigger: GAGGGGTTTGAGGCGACTCCATCTAAACAATAATAA...GGGCAATGAATTGGTTTGTTCCATGGGGAAATGTGTATACGTTTTTGGTTGTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR TCA 90 bp | AGTGATGTGCCTAGTTTACACAAATGTTTCCCGCGTGTAAAATTAAAAGGAAATTGTCCAACCAATCCTTaGGAGAAATTAGTTCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: SDVPSLHKCFPRVKLKGNCPTNP*EKLVHR Trigger: CCTGTGAACTAATTTCTCTCAAGGATTGGTTGGACA...ATTTCCTTTTAATTTTACACGCGGGAAACATTTGTGTAAACTAGGCACATCACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS GCA 90 bp | TGGCCCGCGGGAGTCTTCACCTTGGGCAGCGCAGGCCCGCGATGGTaGACGTGTGCGTGTGGGTGGCCACCCCCGCCGCCGCCTCCACCC | + |
|
Preference number: 5 (lower is better) Translates to: WPAGVFTLGSAGPRW*TCACGWPPPPPPPP Trigger: GGGTGGAGGCGGCGGCGGGGGTGGCCACCCACACGCACACGTGCACCATCGCGGGCCTGCGCTGCCCAAGGTGAAGACTCCCGCGGGCCA 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS CCA 90 bp | ACGTGGCCCGCGGGAGTCTTCACCTTGGGCAGCGCAGGCCCGCGATaGTGCACGTGTGCGTGTGGGTGGCCACCCCCGCCGCCGCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TWPAGVFTLGSAGPR*CTCACGWPPPPPPP Trigger: TGGAGGCGGCGGCGGGGGTGGCCACCCACACGCACACGTGCACCATCGCGGGCCTGCGCTGCCCAAGGTGAAGACTCCCGCGGGCCACGT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS CCA 90 bp | TCCTCCTCCCCAGGCTGCATCTGCATCTGCGGAGGGGGCTGCTGCTaGGGCTGTTGCGGCGGCGGCGGCGGCTGCTGCTGCAGGTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSSPGCICICGGGCC*GCCGGGGGCCCRWW Trigger: CCACCACCTGCAGCAGCAGCCGCCGCCGCCGCCGCAACAGCCCCAGCAGCAGCCCCCTCCGCAGATGCAGATGCAGCCTGGGGAGGAGGA 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS GCA 90 bp | GGGAGTCTTCACCTTGGGCAGCGCAGGCCCGCGATGGTGCACGTGTaGGTGTGGGTGGCCACCCCCGCCGCCGCCTCCACCCCCATACAC | + |
|
Preference number: 5 (lower is better) Translates to: GSLHLGQRRPAMVHV*VWVATPAAASTPIH Trigger: GTGTATGGGGGTGGAGGCGGCGGCGGGGGTGGCCACCCACACGCACACGTGCACCATCGCGGGCCTGCGCTGCCCAAGGTGAAGACTCCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS TCA 90 bp | CGTCCTGCACCGGCGACAGTAGGTCCTCTCGGGGCTCGATGGTGCTaGCGCTGTAGGCGGGGCTCCTCAAATGGTGGCTTTCCCGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RPAPATVGPLGARWC*RCRRGSSNGGFPAS Trigger: AGAGGCGGGAAAGCCACCATTTGAGGAGCCCCGCCTACAGCGTCAGCACCATCGAGCCCCGAGAGGACCTACTGTCGCCGGTGCAGGACG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS GCA 90 bp | CAAAGACAGCACCCGGAGGGCTGTAGAGCACCGGTTCCCGCAGCCTaGTCTCCCCTGCACCCGGGTGCAAATACTGATGGGGGCGTCGCA | + |
|
Preference number: 5 (lower is better) Translates to: QRQHPEGCRAPVPAA*SPLHPGANTDGGVA Trigger: TGCGACGCCCCCATCAGTATTTGCACCCGGGTGCAGGGGAGAGCAGGCTGCGGGAACCGGTGCTCTACAGCCCTCCGGGTGCTGTCTTTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS CCA 90 bp | GGTGAGGGATGTATTCATACACGTGGCCCGCGGGAGTCTTCACCTTaGGCAGCGCAGGCCCGCGATGGTGCACGTGTGCGTGTGGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GEGCIHTRGPRESSP*AAQARDGARVRVGG Trigger: GCCACCCACACGCACACGTGCACCATCGCGGGCCTGCGCTGCCCAAGGTGAAGACTCCCGCGGGCCACGTGTATGAATACATCCCTCACC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS GCA 90 bp | ACCCGGAGGGCTGTAGAGCACCGGTTCCCGCAGCCTGCTCTCCCCTaGACCCGGGTGCAAATACTGATGGGGGCGTCGCAGGTCATAGTT | + |
|
Preference number: 5 (lower is better) Translates to: TRRAVEHRFPQPALP*TRVQILMGASQVIV Trigger: AACTATGACCTGCGACGCCCCCATCAGTATTTGCACCCGGGTGCAGGGGAGAGCAGGCTGCGGGAACCGGTGCTCTACAGCCCTCCGGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS GCA 90 bp | GCCTGCGGGGGTCCCAGTGCTATTCAACCTCACAGCTGGAGTCGCTaGGTTCGTCCTGGATGGTACCTGGATGGAAGAGGGCGTGGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: ACGGPSAIQPHSWSR*VRPGWYLDGRGRGR Trigger: ACGCCCACGCCCTCTTCCATCCAGGTACCATCCAGGACGAACGCAGCGACTCCAGCTGTGAGGTTGAATAGCACTGGGACCCCCGCAGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS GCA 90 bp | CCAAAGGCCCGGTCCTGGATCATGGAGATGCGGTTATTACCCAGGTaGAGGAGGTCTAGACCGGTGGCTTCCAGGAAGTCTGTTCTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: PKARSWIMEMRLLPR*RRSRPVASRKSVLR Trigger: GCGCAGAACAGACTTCCTGGAAGCCACCGGTCTAGACCTCCTGCACCTGGGTAATAACCGCATCTCCATGATCCAGGACCGGGCCTTTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS CCA 90 bp | TCCCAGTGCTATTCAACCTCACAGCTGGAGTCGCTGCGTTCGTCCTaGATGGTACCTGGATGGAAGAGGGCGTGGGCGTGGAAACCACCA | + |
|
Preference number: 5 (lower is better) Translates to: SQCYSTSQLESLRSS*MVPGWKRAWAWKPP Trigger: TGGTGGTTTCCACGCCCACGCCCTCTTCCATCCAGGTACCATCCAGGACGAACGCAGCGACTCCAGCTGTGAGGTTGAATAGCACTGGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS GCA 90 bp | TCAGGTTGCCTAGATCCCCAAAGGCCCGGTCCTGGATCATGGAGATaGGGTTATTACCCAGGTGCAGGAGGTCTAGACCGGTGGCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SGCLDPQRPGPGSWR*GYYPGAGGLDRWLP Trigger: TGGAAGCCACCGGTCTAGACCTCCTGCACCTGGGTAATAACCGCATCTCCATGATCCAGGACCGGGCCTTTGGGGATCTAGGCAACCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS CCA 90 bp | GAGTCGCTGCGTTCGTCCTGGATGGTACCTGGATGGAAGAGGGCGTaGGCGTGGAAACCACCACATCAGAGTAGTCTGGGCATAGCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: ESLRSSWMVPGWKRA*AWKPPHQSSLGIAV Trigger: AACTGCTATGCCCAGACTACTCTGATGTGGTGGTTTCCACGCCCACGCCCTCTTCCATCCAGGTACCATCCAGGACGAACGCAGCGACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS CCA 90 bp | AGTGCTATTCAACCTCACAGCTGGAGTCGCTGCGTTCGTCCTGGATaGTACCTGGATGGAAGAGGGCGTGGGCGTGGAAACCACCACATC | + |
|
Preference number: 5 (lower is better) Translates to: SAIQPHSWSRCVRPG*YLDGRGRGRGNHHI Trigger: GATGTGGTGGTTTCCACGCCCACGCCCTCTTCCATCCAGGTACCATCCAGGACGAACGCAGCGACTCCAGCTGTGAGGTTGAATAGCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS CCA 90 bp | GGAGAAAGTGTAAGCAGCCGGGCTGCATGGGAATTTAGGGTATTCTaGGAGGCTGCTGCCCGCAGGGGTAGTGGAGCAGTGTTTGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GESVSSRAAWEFRVF*EAAARRGSGAVFVW Trigger: CCAGACAAACACTGCTCCACTACCCCTGCGGGCAGCAGCCTCCCAGAATACCCTAAATTCCCATGCAGCCCGGCTGCTTACACTTTCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS CCA 90 bp | TCGCAGGTCATAGTTTGGGGAGAAAGTGTAAGCAGCCGGGCTGCATaGGAATTTAGGGTATTCTGGGAGGCTGCTGCCCGCAGGGGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: SQVIVWGESVSSRAA*EFRVFWEAAARRGS Trigger: ACTACCCCTGCGGGCAGCAGCCTCCCAGAATACCCTAAATTCCCATGCAGCCCGGCTGCTTACACTTTCTCCCCAAACTATGACCTGCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS GCA 90 bp | TCAGCCTCTCAATCCTGTTGCCATTCAGATAGAGGCGTCTCAGGTTaGCTAGATCCCCAAAGGCCCGGTCCTGGATCATGGAGATGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: SASQSCCHSDRGVSG*LDPQRPGPGSWRCG Trigger: ACCGCATCTCCATGATCCAGGACCGGGCCTTTGGGGATCTAGGCAACCTGAGACGCCTCTATCTGAATGGCAACAGGATTGAGAGGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS GCA 90 bp | GGCGCCTTACAGATCACTTCGTCCACTAACACCCCCACTTTGAGCTaGTCAATCCACAGCTTCATGCCCACCACGTCGCAGGTACAATCC | + |
|
Preference number: 5 (lower is better) Translates to: GALQITSSTNTPTLS*SIHSFMPTTSQVQS Trigger: GGATTGTACCTGCGACGTGGTGGGCATGAAGCTGTGGATTGAGCAGCTCAAAGTGGGGGTGTTAGTGGACGAAGTGATCTGTAAGGCGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS CCA 90 bp | TGCACCCGGGTGCAAATACTGATGGGGGCGTCGCAGGTCATAGTTTaGGGAGAAAGTGTAAGCAGCCGGGCTGCATGGGAATTTAGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: CTRVQILMGASQVIV*GESVSSRAAWEFRV Trigger: TACCCTAAATTCCCATGCAGCCCGGCTGCTTACACTTTCTCCCCAAACTATGACCTGCGACGCCCCCATCAGTATTTGCACCCGGGTGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS GCA 90 bp | GTTTCCTTGGACAAAGTTCCTGCTTGGATACCTCGTCCAAATCCCTaGCGTGTAGACGGAAGGGGGTCTCACAGACCACATCGCCCACAA | + |
|
Preference number: 5 (lower is better) Translates to: VSLDKVPAWIPRPNP*RVDGRGSHRPHRPQ Trigger: TTGTGGGCGATGTGGTCTGTGAGACCCCCTTCCGTCTACACGGCAGGGATTTGGACGAGGTATCCAAGCAGGAACTTTGTCCAAGGAAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR CAA 90 bp | ATGCAAATCGCCCTCCAGAAAGCCCTTCTGTCTTCCCCCACAGACAAGAAGCGACTCACGTCGGAATTGTaGGTACTGGTGTGGTCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: MQIALQKALLSSPTDKKRLTSEL*VLVWSL Trigger: GAGCGACCACACCAGTACCAACAATTCCGACGTGAG...TCGCTTCTTGTCTGTGGGGGAAGACAGAAGGGCTTTCTGGAGGGCGATTTGCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS CCA 90 bp | GGTCTTTGTAATCCTCCACGGAATTGCCTTCTCGAGACCGGTAGATaGGGTTCTTGCACATGTGGCCCAGGGGGTGAGGGATGTATTCAT | + |
|
Preference number: 5 (lower is better) Translates to: GLCNPPRNCLLETGR*GSCTCGPGGEGCIH Trigger: ATGAATACATCCCTCACCCCCTGGGCCACATGTGCAAGAACCCCATCTACCGGTCTCGAGAAGGCAATTCCGTGGAGGATTACAAAGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS TCA 90 bp | TGGAAACCACCACATCAGAGTAGTCTGGGCATAGCAGTTCAGACTTaGTGGACCGCATGTAGGTCTCTGCGAATTTCTTGGGCGCCTTAC | + |
|
Preference number: 5 (lower is better) Translates to: WKPPHQSSLGIAVQT*WTACRSLRISWAPY Trigger: GTAAGGCGCCCAAGAAATTCGCAGAGACCTACATGCGGTCCATCAAGTCTGAACTGCTATGCCCAGACTACTCTGATGTGGTGGTTTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS GCA 90 bp | GTTGACATTGAGACCCAGATCAGAGATCTGCAGGTTGCAAGTACATaGTGTAGGACATTCCAAAGGCACCGGGGATTTGGTCTGGTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: VDIETQIRDLQVAST*CRTFQRHRGFGLVG Trigger: GCCTACCAGACCAAATCCCCGGTGCCTTTGGAATGTCCTACAGCATGTACTTGCAACCTGCAGATCTCTGATCTGGGTCTCAATGTCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS GCA 90 bp | ATCTTGCGCTCTTGGCAGTTGACATTGAGACCCAGATCAGAGATCTaGAGGTTGCAAGTACATGCTGTAGGACATTCCAAAGGCACCGGG | + |
|
Preference number: 5 (lower is better) Translates to: ILRSWQLTLRPRSEI*RLQVHAVGHSKGTG Trigger: CCCGGTGCCTTTGGAATGTCCTACAGCATGTACTTGCAACCTGCAGATCTCTGATCTGGGTCTCAATGTCAACTGCCAAGAGCGCAAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS GCA 90 bp | TCTGCAGGCCATAGAATAATTCTGGGCTCAGCCTCTCAATCCTGTTaGCATTCAGATAGAGGCGTCTCAGGTTGCCTAGATCCCCAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SAGHRIILGSASQSC*HSDRGVSGCLDPQR Trigger: CCTTTGGGGATCTAGGCAACCTGAGACGCCTCTATCTGAATGGCAACAGGATTGAGAGGCTGAGCCCAGAATTATTCTATGGCCTGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS CCA 90 bp | ATAGAGGCGGCTCAGAAGGTTTCCAGACAACAAGAGGTGATAGATTaGGAAACGGGGAGGGCTAATTTCAGAGAGACTGATGATGCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: IEAAQKVSRQQEVID*ETGRANFRETDDAP Trigger: CGGGGCATCATCAGTCTCTCTGAAATTAGCCCTCCCCGTTTCCCAATCTATCACCTCTTGTTGTCTGGAAACCTTCTGAGCCGCCTCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042767.9 ENSMUST00000227891.2 |
||
| CDS CCA 90 bp | AAACAGCAGAGGAAGAAGTGGCCACAGAGTTTACAGAAGCTGGGGTaGTATGTAGATACCCCGTGGTGCTTAAAGGAGTCTGTGGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: KQQRKKWPQSLQKLG*YVDTPWCLKESVAS Trigger: TGAGGCCACAGACTCCTTTAAGCACCACGGGGTATCTACATACCACCCCAGCTTCTGTAAACTCTGTGGCCACTTCTTCCTCTGCTGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS CCA 90 bp | AAGAATAGCAGCTGGAGGTTTGGGACGGGATCAAAAGTCCCAGCCTaGATCTCACGGATGAGATTGTACTGGAGGAAGAGATACTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KNSSWRFGTGSKVPA*ISRMRLYWRKRYCR Trigger: CCTGCAGTATCTCTTCCTCCAGTACAATCTCATCCGTGAGATCCAGGCTGGGACTTTTGATCCCGTCCCAAACCTCCAGCTGCTATTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS CCA 90 bp | TTGAAAGAGCTCACGTCGGAATTGTTGGTACTGGTGTGGTCGCTCTaGTTCTTTTTCCTCCGTTTCATGACCAGCACGAAAAGGCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LKELTSELLVLVWSL*FFFLRFMTSTKRPA Trigger: AGCAGGCCTTTTCGTGCTGGTCATGAAACGGAGGAAAAAGAACCAGAGCGACCACACCAGTACCAACAATTCCGACGTGAGCTCTTTCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR CAA 90 bp | CCAGTGCAACGACGCCTCTGTGAAAATCATAGGCTAAATAGTGAAGGAAAGAGGGCGATGCTCTCGATCTaGCGCTCTTGGCAGTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: PVQRRLCENHRLNSEGKRAMLSI*RSWQLT Trigger: TGTCAACTGCCAAGAGCGCAAGATCGAGAGCATCGC...CCTCTTTCCTTCACTATTTAGCCTATGATTTTCACAGAGGCGTCGTTGCACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR CAA 90 bp | ATACAGAGACTTGTACAGCCCATCATTTGGTCTTCTGAAGTGCAAGTGCACGTGGAGCTCACGTCGGAATaGTTGGTACTGGTGTGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: IQRLVQPIIWSSEVQVHVELTSE*LVLVWS Trigger: CGACCACACCAGTACCAACAATTCCGACGTGAGCTC...CACGTGCACTTGCACTTCAGAAGACCAAATGATGGGCTGTACAAGTCTCTGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR CAA 90 bp | AGTGATGTGCCTAGTTTACACAAATGTTTCCCGCGTGTAAAATTAAAAGGAAATGCGGGAGTCTTCACCTaGGGCAGCGCAGGCCCGCGA | + |
|
Preference number: 5 (lower is better) Translates to: SDVPSLHKCFPRVKLKGNAGVFT*GSAGPR Trigger: TCGCGGGCCTGCGCTGCCCAAGGTGAAGACTCCCGC...ATTTCCTTTTAATTTTACACGCGGGAAACATTTGTGTAAACTAGGCACATCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS TCA 90 bp | GGTCTAGACCGGTGGCTTCCAGGAAGTCTGTTCTGCGCACAACAGTaGTATAGTTCTCTGTCAGGTACATTTTCTTGGGATTGTAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GLDRWLPGSLFCAQQ*YSSLSGTFSWDCRA Trigger: AGCCCTACAATCCCAAGAAAATGTACCTGACAGAGAACTATATCACTGTTGTGCGCAGAACAGACTTCCTGGAAGCCACCGGTCTAGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR CAA 90 bp | CACAACCTGTTTCAAGTCACTCTTGATGCAAATCGCCCTCCAGAAAGCCCTTCTTTGCGCTCTTGGCAGTaGACATTGAGACCCAGATCA | + |
|
Preference number: 5 (lower is better) Translates to: HNLFQVTLDANRPPESPSLRSWQ*TLRPRS Trigger: TGATCTGGGTCTCAATGTCAACTGCCAAGAGCGCAA...AGAAGGGCTTTCTGGAGGGCGATTTGCATCAAGAGTGACTTGAAACAGGTTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS TCA 90 bp | CCGTGGTGCTTAAAGGAGTCTGTGGCCTCATCTCGTAGTCAGAAATaGGTTTCCTTGGACAAAGTTCCTGCTTGGATACCTCGTCCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: PWCLKESVASSRSQK*VSLDKVPAWIPRPN Trigger: ATTTGGACGAGGTATCCAAGCAGGAACTTTGTCCAAGGAAACTCATTTCTGACTACGAGATGAGGCCACAGACTCCTTTAAGCACCACGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS CCA 90 bp | ATCTATTTGAATGAGGGAAGTCAGCTGATCCAAAACTCCACTCACTaGCAAGGAAGTGAAGCTGTTACCCCTCAGGTTCAGCCTGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: IYLNEGSQLIQNSTH*QGSEAVTPQVQPEK Trigger: CTTCTCAGGCTGAACCTGAGGGGTAACAGCTTCACTTCCTTGCCAGTGAGTGGAGTTTTGGATCAGCTGACTTCCCTCATTCAAATAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS CCA 90 bp | TACTGCATGTTGAAAGAGCTCACGTCGGAATTGTTGGTACTGGTGTaGTCGCTCTGGTTCTTTTTCCTCCGTTTCATGACCAGCACGAAA | + |
|
Preference number: 5 (lower is better) Translates to: YCMLKELTSELLVLV*SLWFFFLRFMTSTK Trigger: TTTCGTGCTGGTCATGAAACGGAGGAAAAAGAACCAGAGCGACCACACCAGTACCAACAATTCCGACGTGAGCTCTTTCAACATGCAGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR CAA 90 bp | TCATTTGGTCTTCTGAAGTGCAAGTGCACGTGGATCTGTACAAATGCAACTGGGGGACAAAGTTCCTGCTaGGATACCTCGTCCAAATCC | + |
|
Preference number: 5 (lower is better) Translates to: SFGLLKCKCTWICTNATGGQSSC*DTSSKS Trigger: GGATTTGGACGAGGTATCCAAGCAGGAACTTTGTCC...CCCAGTTGCATTTGTACAGATCCACGTGCACTTGCACTTCAGAAGACCAAATGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR CAA 90 bp | CAGAGACTTGTACAGCCCATCATTTGGTCTTCTGAAGTGCAAGTGCACGTGGATTCAGAGATCTGCAGGTaGCAAGTACATGCTGTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: QRLVQPIIWSSEVQVHVDSEICR*QVHAVG Trigger: TCCTACAGCATGTACTTGCAACCTGCAGATCTCTGA...ATCCACGTGCACTTGCACTTCAGAAGACCAAATGATGGGCTGTACAAGTCTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR CAA 90 bp | CAGAGACTTGTACAGCCCATCATTTGGTCTTCTGAAGTGCAAGTGCACGTGGATTCTTGGCAGTTGACATaGAGACCCAGATCAGAGATC | + |
|
Preference number: 5 (lower is better) Translates to: QRLVQPIIWSSEVQVHVDSWQLT*RPRSEI Trigger: GATCTCTGATCTGGGTCTCAATGTCAACTGCCAAGA...ATCCACGTGCACTTGCACTTCAGAAGACCAAATGATGGGCTGTACAAGTCTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR CAA 90 bp | GTCTTCCCCCACAGACAAGAAGCGAAAGTGATGTGCCTAGTTTACACAAATGTTATAGCAGCTGGAGGTTaGGGACGGGATCAAAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: VFPHRQEAKVMCLVYTNVIAAGG*GRDQKS Trigger: GGACTTTTGATCCCGTCCCAAACCTCCAGCTGCTAT...AACATTTGTGTAAACTAGGCACATCACTTTCGCTTCTTGTCTGTGGGGGAAGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR CAA 90 bp | TCATTTGGTCTTCTGAAGTGCAAGTGCACGTGGATCTGTACAAATGCAACTGGGGTCTCTGCGAATTTCTaGGGCGCCTTACAGATCACT | + |
|
Preference number: 5 (lower is better) Translates to: SFGLLKCKCTWICTNATGVSANF*GALQIT Trigger: AGTGATCTGTAAGGCGCCCAAGAAATTCGCAGAGAC...CCCAGTTGCATTTGTACAGATCCACGTGCACTTGCACTTCAGAAGACCAAATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR CAA 90 bp | CCAGTGCAACGACGCCTCTGTGAAAATCATAGGCTAAATAGTGAAGGAAAGAGGGTCGCAGGTCATAGTTaGGGGAGAAAGTGTAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PVQRRLCENHRLNSEGKRVAGHS*GRKCKQ Trigger: CTGCTTACACTTTCTCCCCAAACTATGACCTGCGAC...CCTCTTTCCTTCACTATTTAGCCTATGATTTTCACAGAGGCGTCGTTGCACTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR CAA 90 bp | AGTGATGTGCCTAGTTTACACAAATGTTTCCCGCGTGTAAAATTAAAAGGAAATCGCACTCTGGGTTTGTaGGGCTGGCGGGTCCCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: SDVPSLHKCFPRVKLKGNRTLGL*GWRVPL Trigger: TAAGGGGACCCGCCAGCCCAACAAACCCAGAGTGCG...ATTTCCTTTTAATTTTACACGCGGGAAACATTTGTGTAAACTAGGCACATCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR CAA 90 bp | GTCTTCCCCCACAGACAAGAAGCGAAAGTGATGTGCCTAGTTTACACAAATGTTACGCTGTACTGCATGTaGAAAGAGCTCACGTCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: VFPHRQEAKVMCLVYTNVTLYCM*KELTSE Trigger: TTCCGACGTGAGCTCTTTCAACATGCAGTACAGCGT...AACATTTGTGTAAACTAGGCACATCACTTTCGCTTCTTGTCTGTGGGGGAAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR CAA 90 bp | ATCATACAGAGACTTGTACAGCCCATCATTTGGTCTTCTGAAGTGCAAGTGCACGACAAGAGATTGTCATaGAGGATAAGCACCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: IIQRLVQPIIWSSEVQVHDKRLS*RISTCS Trigger: GCTGCAGGTGCTTATCCTCAATGACAATCTCTTGTC...GTGCACTTGCACTTCAGAAGACCAAATGATGGGCTGTACAAGTCTCTGTATGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR CAA 90 bp | TCATTTGGTCTTCTGAAGTGCAAGTGCACGTGGATCTGTACAAATGCAACTGGGCTGTCCAACCAATCCTaGAGAGAAATTAGTTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: SFGLLKCKCTWICTNATGLSNQS*REISSQ Trigger: CTGTGAACTAATTTCTCTCAAGGATTGGTTGGACAG...CCCAGTTGCATTTGTACAGATCCACGTGCACTTGCACTTCAGAAGACCAAATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR CAA 90 bp | ATCATACAGAGACTTGTACAGCCCATCATTTGGTCTTCTGAAGTGCAAGTGCACATGGCCTGCAGTTGGTaGTTATTCAAGAATAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: IIQRLVQPIIWSSEVQVHMACSW*LFKNSS Trigger: GCTGCTATTCTTGAATAACAACCAACTGCAGGCCAT...GTGCACTTGCACTTCAGAAGACCAAATGATGGGCTGTACAAGTCTCTGTATGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS TCA 90 bp | AATTTATTATTGTTTAGATGGAGTCGCCTCAAACCCCTCAGCCCATaGAAAGCCCCAGTCTCAATGTCTTGGATAACATTGCTACCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: NLLLFRWSRLKPLSP*KAPVSMSWITLLPR Trigger: TCTGGGTAGCAATGTTATCCAAGACATTGAGACTGGGGCTTTTCATGGGCTGAGGGGTTTGAGGCGACTCCATCTAAACAATAATAAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS CCA 90 bp | CCTCACAAGGACATGCATTGTCACAGATTTCCCCATAATAATCGATaGTTTCTGCACAGGAAAGGACGAGAGATGTTACAGCAAATGCTA | + |
|
Preference number: 5 (lower is better) Translates to: PHKDMHCHRFPHNNR*FLHRKGREMLQQML Trigger: TAGCATTTGCTGTAACATCTCTCGTCCTTTCCTGTGCAGAAACCATCGATTATTATGGGGAAATCTGTGACAATGCATGTCCTTGTGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042767.9 ENSMUST00000227891.2 |
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| CDS-3UTR CAA 90 bp | CACAACCTGTTTCAAGTCACTCTTGATGCAAATCGCCCTCCAGAAAGCCCTTCTAGTTCCAATTTATTATaGTTTAGATGGAGTCGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: HNLFQVTLDANRPPESPSSSNLL*FRWSRL Trigger: GAGGCGACTCCATCTAAACAATAATAAATTGGAACT...AGAAGGGCTTTCTGGAGGGCGATTTGCATCAAGAGTGACTTGAAACAGGTTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR CAA 90 bp | GTCTTCCCCCACAGACAAGAAGCGAAAGTGATGTGCCTAGTTTACACAAATGTTAGTTTCCCAAAAGCATaGGGTTCAATGACACTGATG | + |
|
Preference number: 5 (lower is better) Translates to: VFPHRQEAKVMCLVYTNVSFPKA*GSMTLM Trigger: CATCAGTGTCATTGAACCCAATGCTTTTGGGAAACT...AACATTTGTGTAAACTAGGCACATCACTTTCGCTTCTTGTCTGTGGGGGAAGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS-3UTR CAA 90 bp | ATCATACAGAGACTTGTACAGCCCATCATTTGGTCTTCTGAAGTGCAAGTGCACAAACCTGACAAGAGATaGTCATTGAGGATAAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: IIQRLVQPIIWSSEVQVHKPDKR*SLRIST Trigger: GGTGCTTATCCTCAATGACAATCTCTTGTCAGGTTT...GTGCACTTGCACTTCAGAAGACCAAATGATGGGCTGTACAAGTCTCTGTATGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR CAA 90 bp | ATACAGAGACTTGTACAGCCCATCATTTGGTCTTCTGAAGTGCAAGTGCACGTGAAACGGAAAAGATTGTaGGGTAAACCTGACAAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: IQRLVQPIIWSSEVQVHVKRKRL*GKPDKR Trigger: TCTCTTGTCAGGTTTACCCAACAATCTTTTCCGTTT...CACGTGCACTTGCACTTCAGAAGACCAAATGATGGGCTGTACAAGTCTCTGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR CAA 90 bp | GTCTTCCCCCACAGACAAGAAGCGAAAGTGATGTGCCTAGTTTACACAAATGTTACAAAACGGAAAAGATaGTTGGGTAAACCTGACAAG | + |
|
Preference number: 5 (lower is better) Translates to: VFPHRQEAKVMCLVYTNVTKRKR*LGKPDK Trigger: CTTGTCAGGTTTACCCAACAATCTTTTCCGTTTTGT...AACATTTGTGTAAACTAGGCACATCACTTTCGCTTCTTGTCTGTGGGGGAAGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR CAA 90 bp | TGGGATACATATGAGACTGTAACAATAGTAGTTCTGTCTTTCAGAGGTCCTGCTATCTCACGGATGAGATaGTACTGGAGGAAGAGATAC | + |
|
Preference number: 5 (lower is better) Translates to: WDTYETVTIVVLSFRGPAISRMR*YWRKRY Trigger: GTATCTCTTCCTCCAGTACAATCTCATCCGTGAGAT...AGCAGGACCTCTGAAAGACAGAACTACTATTGTTACAGTCTCATATGTATCCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS-3UTR CAA 90 bp | AGTGATGTGCCTAGTTTACACAAATGTTTCCCGCGTGTAAAATTAAAAGGAAATAACTTTATCCATGTGTaGCAACAGCCCCACATAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SDVPSLHKCFPRVKLKGNNFIHV*QQPHIG Trigger: CCCTATGTGGGGCTGTTGCAACACATGGATAAAGTT...ATTTCCTTTTAATTTTACACGCGGGAAACATTTGTGTAAACTAGGCACATCACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS GCA 72 bp | CACCTTGGGCAGCGCAGGCCCGCGATGGTGCACGTGTaGGTGTGGGTGGCCACCCCCGCCGCCGCCTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: HLGQRRPAMVHV*VWVATPAAAST Trigger: GGTGGAGGCGGCGGCGGGGGTGGCCACCCACACGCACACGTGCACCATCGCGGGCCTGCGCTGCCCAAGGTG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS GCA 72 bp | GGAGTCTTCACCTTGGGCAGCGCAGGCCCGCGATGGTaGACGTGTGCGTGTGGGTGGCCACCCCCGCCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: GVFTLGSAGPRW*TCACGWPPPPP Trigger: CGGCGGCGGGGGTGGCCACCCACACGCACACGTGCACCATCGCGGGCCTGCGCTGCCCAAGGTGAAGACTCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS CCA 72 bp | GCGGGAGTCTTCACCTTGGGCAGCGCAGGCCCGCGATaGTGCACGTGTGCGTGTGGGTGGCCACCCCCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: AGVFTLGSAGPR*CTCACGWPPPP Trigger: CGGCGGGGGTGGCCACCCACACGCACACGTGCACCATCGCGGGCCTGCGCTGCCCAAGGTGAAGACTCCCGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS GCA 72 bp | GCTGTAGAGCACCGGTTCCCGCAGCCTGCTCTCCCCTaGACCCGGGTGCAAATACTGATGGGGGCGTCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: AVEHRFPQPALP*TRVQILMGASQ Trigger: CTGCGACGCCCCCATCAGTATTTGCACCCGGGTGCAGGGGAGAGCAGGCTGCGGGAACCGGTGCTCTACAGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS GCA 72 bp | CACCCGGAGGGCTGTAGAGCACCGGTTCCCGCAGCCTaGTCTCCCCTGCACCCGGGTGCAAATACTGATGGG | + |
|
Preference number: 6 (lower is better) Translates to: HPEGCRAPVPAA*SPLHPGANTDG Trigger: CCCATCAGTATTTGCACCCGGGTGCAGGGGAGAGCAGGCTGCGGGAACCGGTGCTCTACAGCCCTCCGGGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS TCA 72 bp | CCGGCGACAGTAGGTCCTCTCGGGGCTCGATGGTGCTaGCGCTGTAGGCGGGGCTCCTCAAATGGTGGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: PATVGPLGARWC*RCRRGSSNGGF Trigger: AAAGCCACCATTTGAGGAGCCCCGCCTACAGCGTCAGCACCATCGAGCCCCGAGAGGACCTACTGTCGCCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS CCA 72 bp | TGTATTCATACACGTGGCCCGCGGGAGTCTTCACCTTaGGCAGCGCAGGCCCGCGATGGTGCACGTGTGCGT | + |
|
Preference number: 6 (lower is better) Translates to: CIHTRGPRESSP*AAQARDGARVR Trigger: ACGCACACGTGCACCATCGCGGGCCTGCGCTGCCCAAGGTGAAGACTCCCGCGGGCCACGTGTATGAATACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS CAA 72 bp | ATGTATTCATACACGTGGCCCGCGGGAGTCTTCACCTaGGGCAGCGCAGGCCCGCGATGGTGCACGTGTGCG | + |
|
Preference number: 6 (lower is better) Translates to: MYSYTWPAGVFT*GSAGPRWCTCA Trigger: CGCACACGTGCACCATCGCGGGCCTGCGCTGCCCAAGGTGAAGACTCCCGCGGGCCACGTGTATGAATACAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS CCA 72 bp | ACAGCTGGAGTCGCTGCGTTCGTCCTGGATGGTACCTaGATGGAAGAGGGCGTGGGCGTGGAAACCACCACA | + |
|
Preference number: 6 (lower is better) Translates to: TAGVAAFVLDGT*MEEGVGVETTT Trigger: TGTGGTGGTTTCCACGCCCACGCCCTCTTCCATCCAGGTACCATCCAGGACGAACGCAGCGACTCCAGCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS CCA 72 bp | CAACCTCACAGCTGGAGTCGCTGCGTTCGTCCTGGATaGTACCTGGATGGAAGAGGGCGTGGGCGTGGAAAC | + |
|
Preference number: 6 (lower is better) Translates to: QPHSWSRCVRPG*YLDGRGRGRGN Trigger: GTTTCCACGCCCACGCCCTCTTCCATCCAGGTACCATCCAGGACGAACGCAGCGACTCCAGCTGTGAGGTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS CCA 72 bp | GCCTGCGGGGGTCCCAGTGCTATTCAACCTCACAGCTaGAGTCGCTGCGTTCGTCCTGGATGGTACCTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: ACGGPSAIQPHS*SRCVRPGWYLD Trigger: ATCCAGGTACCATCCAGGACGAACGCAGCGACTCCAGCTGTGAGGTTGAATAGCACTGGGACCCCCGCAGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS CCA 72 bp | GTAAGCAGCCGGGCTGCATGGGAATTTAGGGTATTCTaGGAGGCTGCTGCCCGCAGGGGTAGTGGAGCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: VSSRAAWEFRVF*EAAARRGSGAV Trigger: CACTGCTCCACTACCCCTGCGGGCAGCAGCCTCCCAGAATACCCTAAATTCCCATGCAGCCCGGCTGCTTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS CAA 72 bp | TTAGAGGGCTGCCTAGAAGTGGGGCGCACTCTGGGTTaGTTGGGCTGGCGGGTCCCCTTAGGAGGCTTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: LEGCLEVGRTLG*LGWRVPLGGFK Trigger: CTTGAAGCCTCCTAAGGGGACCCGCCAGCCCAACAAACCCAGAGTGCGCCCCACTTCTAGGCAGCCCTCTAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS GCA 72 bp | CCCCCGCCGCCGCCTCCACCCCCATACACGCTGTACTaGATGTTGAAAGAGCTCACGTCGGAATTGTTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: PPPPPPPPYTLY*MLKELTSELLV Trigger: TACCAACAATTCCGACGTGAGCTCTTTCAACATGCAGTACAGCGTGTATGGGGGTGGAGGCGGCGGCGGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS CCA 72 bp | CGTTCGTCCTGGATGGTACCTGGATGGAAGAGGGCGTaGGCGTGGAAACCACCACATCAGAGTAGTCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: RSSWMVPGWKRA*AWKPPHQSSLG Trigger: GCCCAGACTACTCTGATGTGGTGGTTTCCACGCCCACGCCCTCTTCCATCCAGGTACCATCCAGGACGAACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS GCA 72 bp | CTAGATCCCCAAAGGCCCGGTCCTGGATCATGGAGATaGGGTTATTACCCAGGTGCAGGAGGTCTAGACCGG | + |
|
Preference number: 6 (lower is better) Translates to: LDPQRPGPGSWR*GYYPGAGGLDR Trigger: CCGGTCTAGACCTCCTGCACCTGGGTAATAACCGCATCTCCATGATCCAGGACCGGGCCTTTGGGGATCTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS GCA 72 bp | GGTCCCAGTGCTATTCAACCTCACAGCTGGAGTCGCTaGGTTCGTCCTGGATGGTACCTGGATGGAAGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: GPSAIQPHSWSR*VRPGWYLDGRG Trigger: CCCTCTTCCATCCAGGTACCATCCAGGACGAACGCAGCGACTCCAGCTGTGAGGTTGAATAGCACTGGGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS CCA 72 bp | CGTCTCAGGTTGCCTAGATCCCCAAAGGCCCGGTCCTaGATCATGGAGATGCGGTTATTACCCAGGTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RLRLPRSPKARS*IMEMRLLPRCR Trigger: CCTGCACCTGGGTAATAACCGCATCTCCATGATCCAGGACCGGGCCTTTGGGGATCTAGGCAACCTGAGACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
||
| CDS CCA 72 bp | AATCCTCCACGGAATTGCCTTCTCGAGACCGGTAGATaGGGTTCTTGCACATGTGGCCCAGGGGGTGAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: NPPRNCLLETGR*GSCTCGPGGEG Trigger: TCCCTCACCCCCTGGGCCACATGTGCAAGAACCCCATCTACCGGTCTCGAGAAGGCAATTCCGTGGAGGATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS CCA 72 bp | GGCTGCAGCTCCGCGATGCTCTCGATCTTGCGCTCTTaGCAGTTGACATTGAGACCCAGATCAGAGATCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GCSSAMLSILRS*QLTLRPRSEIC Trigger: GCAGATCTCTGATCTGGGTCTCAATGTCAACTGCCAAGAGCGCAAGATCGAGAGCATCGCGGAGCTGCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS CAA 72 bp | CCGCCGCCTCCACCCCCATACACGCTGTACTGCATGTaGAAAGAGCTCACGTCGGAATTGTTGGTACTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: PPPPPPYTLYCM*KELTSELLVLV Trigger: CACCAGTACCAACAATTCCGACGTGAGCTCTTTCAACATGCAGTACAGCGTGTATGGGGGTGGAGGCGGCGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS CAA 72 bp | GGTGCAAATACTGATGGGGGCGTCGCAGGTCATAGTTaGGGGAGAAAGTGTAAGCAGCCGGGCTGCATGGGA | + |
|
Preference number: 6 (lower is better) Translates to: GANTDGGVAGHS*GRKCKQPGCMG Trigger: TCCCATGCAGCCCGGCTGCTTACACTTTCTCCCCAAACTATGACCTGCGACGCCCCCATCAGTATTTGCACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS TCA 72 bp | GAAGGGGGTCTCACAGACCACATCGCCCACAAGGGCTaGGTAGGAGATGCTGTCCAACCAATCCTTGAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: EGGLTDHIAHKG*VGDAVQPILER Trigger: TCTCTCAAGGATTGGTTGGACAGCATCTCCTACTCAGCCCTTGTGGGCGATGTGGTCTGTGAGACCCCCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS TCA 72 bp | CGCCGCCTCCACCCCCATACACGCTGTACTGCATGTTaGAAGAGCTCACGTCGGAATTGTTGGTACTGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: RRLHPHTRCTAC*KSSRRNCWYWC Trigger: ACACCAGTACCAACAATTCCGACGTGAGCTCTTTCAACATGCAGTACAGCGTGTATGGGGGTGGAGGCGGCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS GCA 72 bp | CAATCCTGTTGCCATTCAGATAGAGGCGTCTCAGGTTaGCTAGATCCCCAAAGGCCCGGTCCTGGATCATGG | + |
|
Preference number: 6 (lower is better) Translates to: QSCCHSDRGVSG*LDPQRPGPGSW Trigger: CCATGATCCAGGACCGGGCCTTTGGGGATCTAGGCAACCTGAGACGCCTCTATCTGAATGGCAACAGGATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS CCA 72 bp | ATAGTTTGGGGAGAAAGTGTAAGCAGCCGGGCTGCATaGGAATTTAGGGTATTCTGGGAGGCTGCTGCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: IVWGESVSSRAA*EFRVFWEAAAR Trigger: GCGGGCAGCAGCCTCCCAGAATACCCTAAATTCCCATGCAGCCCGGCTGCTTACACTTTCTCCCCAAACTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS CCA 72 bp | GTGCAAATACTGATGGGGGCGTCGCAGGTCATAGTTTaGGGAGAAAGTGTAAGCAGCCGGGCTGCATGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: VQILMGASQVIV*GESVSSRAAWE Trigger: TTCCCATGCAGCCCGGCTGCTTACACTTTCTCCCCAAACTATGACCTGCGACGCCCCCATCAGTATTTGCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS CAA 90 bp | TTCTTGGGCGCCTTACAGATCACTTCGTCCACTAACACCCCCACTTaGAGCTGCTCAATCCACAGCTTCATGCCCACCACGTCGCAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: FLGALQITSSTNTPT*SCSIHSFMPTTSQV Trigger: TACCTGCGACGTGGTGGGCATGAAGCTGTGGATTGAGCAGCTCAAAGTGGGGGTGTTAGTGGACGAAGTGATCTGTAAGGCGCCCAAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS TCA 72 bp | TGGTGTGGTCGCTCTGGTTCTTTTTCCTCCGTTTCATaGCCAGCACGAAAAGGCCTGCTGCCACAAAGACGG | + |
|
Preference number: 6 (lower is better) Translates to: WCGRSGSFSSVS*PARKGLLPQRR Trigger: CCGTCTTTGTGGCAGCAGGCCTTTTCGTGCTGGTCATGAAACGGAGGAAAAAGAACCAGAGCGACCACACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS GCA 72 bp | GACAAAGTTCCTGCTTGGATACCTCGTCCAAATCCCTaGCGTGTAGACGGAAGGGGGTCTCACAGACCACAT | + |
|
Preference number: 6 (lower is better) Translates to: DKVPAWIPRPNP*RVDGRGSHRPH Trigger: ATGTGGTCTGTGAGACCCCCTTCCGTCTACACGGCAGGGATTTGGACGAGGTATCCAAGCAGGAACTTTGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS CCA 72 bp | TCTCTGTCAGGTACATTTTCTTGGGATTGTAGGGCTTaGGCTGCAGCTCCGCGATGCTCTCGATCTTGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: SLSGTFSWDCRA*AAAPRCSRSCA Trigger: AGCGCAAGATCGAGAGCATCGCGGAGCTGCAGCCCAAGCCCTACAATCCCAAGAAAATGTACCTGACAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS CAA 72 bp | GCCTTACAGATCACTTCGTCCACTAACACCCCCACTTaGAGCTGCTCAATCCACAGCTTCATGCCCACCACG | + |
|
Preference number: 6 (lower is better) Translates to: ALQITSSTNTPT*SCSIHSFMPTT Trigger: CGTGGTGGGCATGAAGCTGTGGATTGAGCAGCTCAAAGTGGGGGTGTTAGTGGACGAAGTGATCTGTAAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS TCA 72 bp | GGACGGGATCAAAAGTCCCAGCCTGGATCTCACGGATaGGATTGTACTGGAGGAAGAGATACTGCAGGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: GRDQKSQPGSHG*DCTGGRDTAGS Trigger: AGAGCCTGCAGTATCTCTTCCTCCAGTACAATCTCATCCGTGAGATCCAGGCTGGGACTTTTGATCCCGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS CCA 72 bp | AGCTGGAGGTTTGGGACGGGATCAAAAGTCCCAGCCTaGATCTCACGGATGAGATTGTACTGGAGGAAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SWRFGTGSKVPA*ISRMRLYWRKR Trigger: TCTCTTCCTCCAGTACAATCTCATCCGTGAGATCCAGGCTGGGACTTTTGATCCCGTCCCAAACCTCCAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS CAA 90 bp | TGCAGCTCCGCGATGCTCTCGATCTTGCGCTCTTGGCAGTTGACATaGAGACCCAGATCAGAGATCTGCAGGTTGCAAGTACATGCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: CSSAMLSILRSWQLT*RPRSEICRLQVHAV Trigger: TACAGCATGTACTTGCAACCTGCAGATCTCTGATCTGGGTCTCAATGTCAACTGCCAAGAGCGCAAGATCGAGAGCATCGCGGAGCTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS CAA 90 bp | CGCTCTTGGCAGTTGACATTGAGACCCAGATCAGAGATCTGCAGGTaGCAAGTACATGCTGTAGGACATTCCAAAGGCACCGGGGATTTG | + |
|
Preference number: 6 (lower is better) Translates to: RSWQLTLRPRSEICR*QVHAVGHSKGTGDL Trigger: CAAATCCCCGGTGCCTTTGGAATGTCCTACAGCATGTACTTGCAACCTGCAGATCTCTGATCTGGGTCTCAATGTCAACTGCCAAGAGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS CAA 90 bp | CCCCCATACACGCTGTACTGCATGTTGAAAGAGCTCACGTCGGAATaGTTGGTACTGGTGTGGTCGCTCTGGTTCTTTTTCCTCCGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: PPYTLYCMLKELTSE*LVLVWSLWFFFLRF Trigger: GAAACGGAGGAAAAAGAACCAGAGCGACCACACCAGTACCAACAATTCCGACGTGAGCTCTTTCAACATGCAGTACAGCGTGTATGGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS GCA 72 bp | TTTCCTCCGTTTCATGACCAGCACGAAAAGGCCTGCTaGCACAAAGACGGACATGATGAAAACCAGCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: FPPFHDQHEKAC*HKDGHDENQQQ Trigger: CTGCTGCTGGTTTTCATCATGTCCGTCTTTGTGGCAGCAGGCCTTTTCGTGCTGGTCATGAAACGGAGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS CAA 72 bp | GCGATGCTCTCGATCTTGCGCTCTTGGCAGTTGACATaGAGACCCAGATCAGAGATCTGCAGGTTGCAAGTA | + |
|
Preference number: 6 (lower is better) Translates to: AMLSILRSWQLT*RPRSEICRLQV Trigger: TACTTGCAACCTGCAGATCTCTGATCTGGGTCTCAATGTCAACTGCCAAGAGCGCAAGATCGAGAGCATCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS CCA 72 bp | AGGAAGAAGTGGCCACAGAGTTTACAGAAGCTGGGGTaGTATGTAGATACCCCGTGGTGCTTAAAGGAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: RKKWPQSLQKLG*YVDTPWCLKES Trigger: AGACTCCTTTAAGCACCACGGGGTATCTACATACCACCCCAGCTTCTGTAAACTCTGTGGCCACTTCTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS CCA 72 bp | AATGAGGGAAGTCAGCTGATCCAAAACTCCACTCACTaGCAAGGAAGTGAAGCTGTTACCCCTCAGGTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: NEGSQLIQNSTH*QGSEAVTPQVQ Trigger: CTGAACCTGAGGGGTAACAGCTTCACTTCCTTGCCAGTGAGTGGAGTTTTGGATCAGCTGACTTCCCTCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS CCA 72 bp | CTCACGTCGGAATTGTTGGTACTGGTGTGGTCGCTCTaGTTCTTTTTCCTCCGTTTCATGACCAGCACGAAA | + |
|
Preference number: 6 (lower is better) Translates to: LTSELLVLVWSL*FFFLRFMTSTK Trigger: TTTCGTGCTGGTCATGAAACGGAGGAAAAAGAACCAGAGCGACCACACCAGTACCAACAATTCCGACGTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS CAA 72 bp | GCAGTTGGTTGTTATTCAAGAATAGCAGCTGGAGGTTaGGGACGGGATCAAAAGTCCCAGCCTGGATCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: AVGCYSRIAAGG*GRDQKSQPGSH Trigger: GTGAGATCCAGGCTGGGACTTTTGATCCCGTCCCAAACCTCCAGCTGCTATTCTTGAATAACAACCAACTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS CAA 90 bp | CCATACACGCTGTACTGCATGTTGAAAGAGCTCACGTCGGAATTGTaGGTACTGGTGTGGTCGCTCTGGTTCTTTTTCCTCCGTTTCATG | + |
|
Preference number: 6 (lower is better) Translates to: PYTLYCMLKELTSEL*VLVWSLWFFFLRFM Trigger: CATGAAACGGAGGAAAAAGAACCAGAGCGACCACACCAGTACCAACAATTCCGACGTGAGCTCTTTCAACATGCAGTACAGCGTGTATGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS TCA 72 bp | CAAGGGCTGAGTAGGAGATGCTGTCCAACCAATCCTTaGGAGAAATTAGTTCACAGGAGCAATTCCAGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: QGLSRRCCPTNP*EKLVHRSNSRG Trigger: ACCCCTGGAATTGCTCCTGTGAACTAATTTCTCTCAAGGATTGGTTGGACAGCATCTCCTACTCAGCCCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS CCA 72 bp | TTGAAAGAGCTCACGTCGGAATTGTTGGTACTGGTGTaGTCGCTCTGGTTCTTTTTCCTCCGTTTCATGACC | + |
|
Preference number: 6 (lower is better) Translates to: LKELTSELLVLV*SLWFFFLRFMT Trigger: GGTCATGAAACGGAGGAAAAAGAACCAGAGCGACCACACCAGTACCAACAATTCCGACGTGAGCTCTTTCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS CAA 72 bp | CTGTACTGCATGTTGAAAGAGCTCACGTCGGAATTGTaGGTACTGGTGTGGTCGCTCTGGTTCTTTTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: LYCMLKELTSEL*VLVWSLWFFFL Trigger: GAGGAAAAAGAACCAGAGCGACCACACCAGTACCAACAATTCCGACGTGAGCTCTTTCAACATGCAGTACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS CAA 72 bp | ACGCTGTACTGCATGTTGAAAGAGCTCACGTCGGAATaGTTGGTACTGGTGTGGTCGCTCTGGTTCTTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: TLYCMLKELTSE*LVLVWSLWFFF Trigger: GAAAAAGAACCAGAGCGACCACACCAGTACCAACAATTCCGACGTGAGCTCTTTCAACATGCAGTACAGCGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS TCA 72 bp | TTGTTTAGATGGAGTCGCCTCAAACCCCTCAGCCCATaGAAAGCCCCAGTCTCAATGTCTTGGATAACATTG | + |
|
Preference number: 6 (lower is better) Translates to: LFRWSRLKPLSP*KAPVSMSWITL Trigger: CAATGTTATCCAAGACATTGAGACTGGGGCTTTTCATGGGCTGAGGGGTTTGAGGCGACTCCATCTAAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS TCA 72 bp | CGGTGGCTTCCAGGAAGTCTGTTCTGCGCACAACAGTaGTATAGTTCTCTGTCAGGTACATTTTCTTGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: RWLPGSLFCAQQ*YSSLSGTFSWD Trigger: ATCCCAAGAAAATGTACCTGACAGAGAACTATATCACTGTTGTGCGCAGAACAGACTTCCTGGAAGCCACCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS GCA 72 bp | CATAGAATAATTCTGGGCTCAGCCTCTCAATCCTGTTaGCATTCAGATAGAGGCGTCTCAGGTTGCCTAGAT | + |
|
Preference number: 6 (lower is better) Translates to: HRIILGSASQSC*HSDRGVSGCLD Trigger: ATCTAGGCAACCTGAGACGCCTCTATCTGAATGGCAACAGGATTGAGAGGCTGAGCCCAGAATTATTCTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS CCA 72 bp | GCTCAGAAGGTTTCCAGACAACAAGAGGTGATAGATTaGGAAACGGGGAGGGCTAATTTCAGAGAGACTGAT | + |
|
Preference number: 6 (lower is better) Translates to: AQKVSRQQEVID*ETGRANFRETD Trigger: ATCAGTCTCTCTGAAATTAGCCCTCCCCGTTTCCCAATCTATCACCTCTTGTTGTCTGGAAACCTTCTGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042767.9 ENSMUST00000227891.2 |
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| CDS CCA 72 bp | CTGTGGCCTCATCTCGTAGTCAGAAATGAGTTTCCTTaGACAAAGTTCCTGCTTGGATACCTCGTCCAAATC | + |
|
Preference number: 6 (lower is better) Translates to: LWPHLVVRNEFP*TKFLLGYLVQI Trigger: GATTTGGACGAGGTATCCAAGCAGGAACTTTGTCCAAGGAAACTCATTTCTGACTACGAGATGAGGCCACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS GCA 72 bp | TCTTGGCAGTTGACATTGAGACCCAGATCAGAGATCTaGAGGTTGCAAGTACATGCTGTAGGACATTCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: SWQLTLRPRSEI*RLQVHAVGHSK Trigger: TTTGGAATGTCCTACAGCATGTACTTGCAACCTGCAGATCTCTGATCTGGGTCTCAATGTCAACTGCCAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS CAA 90 bp | AAGGGCACAAAACGGAAAAGATTGTTGGGTAAACCTGACAAGAGATaGTCATTGAGGATAAGCACCTGCAGCATGTGCAGTTTCCCAAAA | + |
|
Preference number: 6 (lower is better) Translates to: KGTKRKRLLGKPDKR*SLRISTCSMCSFPK Trigger: TTTTGGGAAACTGCACATGCTGCAGGTGCTTATCCTCAATGACAATCTCTTGTCAGGTTTACCCAACAATCTTTTCCGTTTTGTGCCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS TCA 72 bp | TACAATCCCAAGGGTTGTCATGTAGATCTATTTGAATaGGGGAAGTCAGCTGATCCAAAACTCCACTCACTG | + |
|
Preference number: 6 (lower is better) Translates to: YNPKGCHVDLFE*GKSADPKLHSL Trigger: CAGTGAGTGGAGTTTTGGATCAGCTGACTTCCCTCATTCAAATAGATCTACATGACAACCCTTGGGATTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS CCA 72 bp | GACATGCATTGTCACAGATTTCCCCATAATAATCGATaGTTTCTGCACAGGAAAGGACGAGAGATGTTACAG | + |
|
Preference number: 6 (lower is better) Translates to: DMHCHRFPHNNR*FLHRKGREMLQ Trigger: CTGTAACATCTCTCGTCCTTTCCTGTGCAGAAACCATCGATTATTATGGGGAAATCTGTGACAATGCATGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042767.9 ENSMUST00000227891.2 |
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| CDS CAA 72 bp | AGAAAGGTATCATCTCGCAGAAGTTCCAATTTATTATaGTTTAGATGGAGTCGCCTCAAACCCCTCAGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: RKVSSRRSSNLL*FRWSRLKPLSP Trigger: TGGGCTGAGGGGTTTGAGGCGACTCCATCTAAACAATAATAAATTGGAACTTCTGCGAGATGATACCTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS CAA 72 bp | AAAAGATTGTTGGGTAAACCTGACAAGAGATTGTCATaGAGGATAAGCACCTGCAGCATGTGCAGTTTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: KRLLGKPDKRLS*RISTCSMCSFP Trigger: TGGGAAACTGCACATGCTGCAGGTGCTTATCCTCAATGACAATCTCTTGTCAGGTTTACCCAACAATCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS CAA 72 bp | AAACGGAAAAGATTGTTGGGTAAACCTGACAAGAGATaGTCATTGAGGATAAGCACCTGCAGCATGTGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: KRKRLLGKPDKR*SLRISTCSMCS Trigger: ACTGCACATGCTGCAGGTGCTTATCCTCAATGACAATCTCTTGTCAGGTTTACCCAACAATCTTTTCCGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS CAA 72 bp | AAGTCCAAGTGCGTTAAGGGCACAAAACGGAAAAGATaGTTGGGTAAACCTGACAAGAGATTGTCATTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: KSKCVKGTKRKR*LGKPDKRLSLR Trigger: CCTCAATGACAATCTCTTGTCAGGTTTACCCAACAATCTTTTCCGTTTTGTGCCCTTAACGCACTTGGACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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| CDS GCA 72 bp | ATTGTCACAGATTTCCCCATAATAATCGATGGTTTCTaGACAGGAAAGGACGAGAGATGTTACAGCAAATGC | + |
|
Preference number: 6 (lower is better) Translates to: IVTDFPIIIDGF*TGKDERCYSKC Trigger: GCATTTGCTGTAACATCTCTCGTCCTTTCCTGTGCAGAAACCATCGATTATTATGGGGAAATCTGTGACAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042767.9 ENSMUST00000227891.2 |
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| CDS CAA 72 bp | TCCAAGTGCGTTAAGGGCACAAAACGGAAAAGATTGTaGGGTAAACCTGACAAGAGATTGTCATTGAGGATA | + |
|
Preference number: 6 (lower is better) Translates to: SKCVKGTKRKRL*GKPDKRLSLRI Trigger: TATCCTCAATGACAATCTCTTGTCAGGTTTACCCAACAATCTTTTCCGTTTTGTGCCCTTAACGCACTTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042767.9 |
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