Pregenerated sensors for SLITRK3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048304Ensembl transcript IDs: ENSMUST00000059407.9, ENSMUST00000192477.2
Found 269 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | GGTAGGAGAGATGCCGTGAGCTGTACACTAGGAGTGAAGGGCACGTaGAGCTATGTAGAGGAAGAAATAGATCAAACCCGAACTAAGCGT | + |
Preference number: 1 (lower is better) Translates to: GRRDAVSCTLGVKGT*SYVEEEIDQTRTKR Trigger: ACGCTTAGTTCGGGTTTGATCTATTTCTTCCTCTACATAGCTCCACGTGCCCTTCACTCCTAGTGTACAGCTCACGGCATCTCTCCTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192477.2 |
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3UTR CAA 90 bp | TATGTAGAGGAAGAAATAGATCAAACCCGAACTAAGCGTATTAAGTaGCAGGGGAGGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGC | + |
Preference number: 2 (lower is better) Translates to: YVEEEIDQTRTKRIK*QGRCVCVCVCARAR Trigger: GCGCGCGCGCGCGCACACACACACACACACACACCTCCCCTGCAACTTAATACGCTTAGTTCGGGTTTGATCTATTTCTTCCTCTACATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192477.2 |
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3UTR-3UTR GCA 90 bp | GAGAGATGCCGTGAGCTGTACACTAGGAGTGAAGGGCACGTGGAGCTATGTAGACTAAGCGTATTAAGTTaGAGGGGAGGTGTGTGTGTG | + |
Preference number: 2 (lower is better) Translates to: ERCRELYTRSEGHVELCRLSVLS*RGGVCV Trigger: CACACACACACCTCCCCTGCAACTTAATACGCTTAG...TCTACATAGCTCCACGTGCCCTTCACTCCTAGTGTACAGCTCACGGCATCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192477.2 |
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3UTR-3UTR GCA 90 bp | AGAGATGCCGTGAGCTGTACACTAGGAGTGAAGGGCACGTGGAGCTATGTAGAGTTGCTGGCAAAAGTCTaGGAAGGCACTTCATTGATT | + |
Preference number: 2 (lower is better) Translates to: RDAVSCTLGVKGTWSYVELLAKV*EGTSLI Trigger: AATCAATGAAGTGCCTTCGCAGACTTTTGCCAGCAA...CTCTACATAGCTCCACGTGCCCTTCACTCCTAGTGTACAGCTCACGGCATCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192477.2 |
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3UTR-3UTR GCA 90 bp | GCCGTGAGCTGTACACTAGGAGTGAAGGGCACGTGGAGCTATGTAGAGGAAGAACATGTACAGAATCTGTaGCATGATGGGAAAAGGAGA | + |
Preference number: 2 (lower is better) Translates to: AVSCTLGVKGTWSYVEEEHVQNL*HDGKRR Trigger: TCTCCTTTTCCCATCATGGCACAGATTCTGTACATG...TTCTTCCTCTACATAGCTCCACGTGCCCTTCACTCCTAGTGTACAGCTCACGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192477.2 |
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3UTR-3UTR GCA 90 bp | GAGAGATGCCGTGAGCTGTACACTAGGAGTGAAGGGCACGTGGAGCTATGTAGAAAGCATGCAGCAAACTaGATTGTTAATACATGTACA | + |
Preference number: 2 (lower is better) Translates to: ERCRELYTRSEGHVELCRKHAAN*IVNTCT Trigger: TGTACATGTATTAACAATGCAGTTTGCTGCATGCTT...TCTACATAGCTCCACGTGCCCTTCACTCCTAGTGTACAGCTCACGGCATCTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192477.2 |
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3UTR-3UTR GCA 90 bp | TCATTTAGGATCAATACAACGATCCCCAGTATACCTCACACATGGCACAGTCAAAATAATGATAACATTTaGTGGCAAAAGTCTGCGAAG | + |
Preference number: 2 (lower is better) Translates to: SFRINTTIPSIPHTWHSQNNDNI*WQKSAK Trigger: CTTCGCAGACTTTTGCCAGCAAATGTTATCATTATT...TTGACTGTGCCATGTGTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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3UTR-3UTR CCA 90 bp | AAAGACACATTGAAGTTTACTCATTTAGGATCAATACAACGATCCCCAGTATACAATGATAACATTTGCTaGCAAAAGTCTGCGAAGGCA | + |
Preference number: 2 (lower is better) Translates to: KDTLKFTHLGSIQRSPVYNDNIC*QKSAKA Trigger: TGCCTTCGCAGACTTTTGCCAGCAAATGTTATCATT...GTATACTGGGGATCGTTGTATTGATCCTAAATGAGTAAACTTCAATGTGTCTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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3UTR GCA 72 bp | ATTAAGTTGCAGGGGAGGTGTGTGTGTGTGTGTGTGTaGGCGCGCGCGCGCGCGTGTGTACGCGTGTGTGTG | + |
Preference number: 3 (lower is better) Translates to: IKLQGRCVCVCV*ARARACVRVCV Trigger: CACACACACGCGTACACACGCGCGCGCGCGCGCGCACACACACACACACACACACCTCCCCTGCAACTTAAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192477.2 |
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3UTR GCA 72 bp | GTGCGTGTGTGTGTGCGTGTGCGTGTGTGTGTGTACTaGACCCAGTGCAGGCTGAGGGACCTAAGTGTATGT | + |
Preference number: 3 (lower is better) Translates to: VRVCVRVRVCVY*TQCRLRDLSVC Trigger: ACATACACTTAGGTCCCTCAGCCTGCACTGGGTGCAGTACACACACACACGCACACGCACACACACACGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192477.2 |
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3UTR GCA 72 bp | TGTGTGCGTGTGCGTGTGTGTGTGTACTGCACCCAGTaGAGGCTGAGGGACCTAAGTGTATGTAGGGAGTTG | + |
Preference number: 3 (lower is better) Translates to: CVRVRVCVYCTQ*RLRDLSVCREL Trigger: CAACTCCCTACATACACTTAGGTCCCTCAGCCTGCACTGGGTGCAGTACACACACACACGCACACGCACACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192477.2 |
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3UTR CCA 72 bp | GATGCCGTGAGCTGTACACTAGGAGTGAAGGGCACGTaGAGCTATGTAGAGGAAGAAATAGATCAAACCCGA | + |
Preference number: 3 (lower is better) Translates to: DAVSCTLGVKGT*SYVEEEIDQTR Trigger: TCGGGTTTGATCTATTTCTTCCTCTACATAGCTCCACGTGCCCTTCACTCCTAGTGTACAGCTCACGGCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192477.2 |
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3UTR-3UTR CAA 90 bp | CTCGAATGTGACTTTTCCCAGGGTGGTAGGAGAGATGCCGTGAGCTGTACACTAAGGGGGAGCACACTTTaGTATTCTCTAGTTATCATG | + |
Preference number: 3 (lower is better) Translates to: LECDFSQGGRRDAVSCTLRGSTL*YSLVIM Trigger: CATGATAACTAGAGAATACAAAAGTGTGCTCCCCCT...TAGTGTACAGCTCACGGCATCTCTCCTACCACCCTGGGAAAAGTCACATTCGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000192477.2 |
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3UTR-3UTR CAA 90 bp | GCCGTGAGCTGTACACTAGGAGTGAAGGGCACGTGGAGCTATGTAGAGGAAGAATGCGAAGGCACTTCATaGATTAATGATCTGAGTATG | + |
Preference number: 3 (lower is better) Translates to: AVSCTLGVKGTWSYVEEECEGTS*INDLSM Trigger: CATACTCAGATCATTAATCAATGAAGTGCCTTCGCA...TTCTTCCTCTACATAGCTCCACGTGCCCTTCACTCCTAGTGTACAGCTCACGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192477.2 |
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3UTR TCA 72 bp | ATATGTATAAGAAAGTGCAGATGTTCTCAAAAATCTTaGCATCAAGATGAAATGTCACGAGGAGGGTGGCTC | + |
Preference number: 3 (lower is better) Translates to: ICIRKCRCSQKS*HQDEMSRGGWL Trigger: GAGCCACCCTCCTCGTGACATTTCATCTTGATGTCAAGATTTTTGAGAACATCTGCACTTTCTTATACATAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192477.2 |
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3UTR-3UTR CAA 90 bp | AAAGACACATTGAAGTTTACTCATTTAGGATCAATACAACGATCCCCAGTATACAGGGGGAGCACACTTTaGTATTCTCTAGTTATCATG | + |
Preference number: 3 (lower is better) Translates to: KDTLKFTHLGSIQRSPVYRGSTL*YSLVIM Trigger: CATGATAACTAGAGAATACAAAAGTGTGCTCCCCCT...GTATACTGGGGATCGTTGTATTGATCCTAAATGAGTAAACTTCAATGTGTCTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CCA 90 bp | GCCGTGAGCTGTACACTAGGAGTGAAGGGCACGTGGAGCTATGTAGAGGAAGAAAATCAACACAGAAAGTaGCACAGGGCCCCCTGGGGG | + |
Preference number: 4 (lower is better) Translates to: AVSCTLGVKGTWSYVEEENQHRK*HRAPWG Trigger: CCCCCAGGGGGCCCTGTGCCACTTTCTGTGTTGATT...TTCTTCCTCTACATAGCTCCACGTGCCCTTCACTCCTAGTGTACAGCTCACGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000192477.2 |
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CDS-3UTR TCA 90 bp | AGAGATGCCGTGAGCTGTACACTAGGAGTGAAGGGCACGTGGAGCTATGTAGAGATATACTCGTACACGTaGCCCACGGGAGGGGCTTTC | + |
Preference number: 4 (lower is better) Translates to: RDAVSCTLGVKGTWSYVEIYSYT*PTGGAF Trigger: GAAAGCCCCTCCCGTGGGTCACGTGTACGAGTATAT...CTCTACATAGCTCCACGTGCCCTTCACTCCTAGTGTACAGCTCACGGCATCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192477.2 |
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CDS-3UTR TCA 90 bp | GCCGTGAGCTGTACACTAGGAGTGAAGGGCACGTGGAGCTATGTAGAGGAAGAAAGTTCTTCCTCAAGTTaGGCCGAGCCAGGGATGTAC | + |
Preference number: 4 (lower is better) Translates to: AVSCTLGVKGTWSYVEEESSSSS*AEPGMY Trigger: GTACATCCCTGGCTCGGCTCAACTTGAGGAAGAACT...TTCTTCCTCTACATAGCTCCACGTGCCCTTCACTCCTAGTGTACAGCTCACGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192477.2 |
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CDS-3UTR TCA 90 bp | CGTTTCAGTTCTGTCCTAGGCAGGGGAAACTGTAAGGATGTAGTTATTGGGACACCCTCCACCTACCCCTaGAACCCCACCAACTGCCGA | + |
Preference number: 4 (lower is better) Translates to: RFSSVLGRGNCKDVVIGTPSTYP*NPTNCR Trigger: TCGGCAGTTGGTGGGGTTTCAGGGGTAGGTGGAGGG...TGTCCCAATAACTACATCCTTACAGTTTCCCCTGCCTAGGACAGAACTGAAACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR GCA 90 bp | GAGAGATGCCGTGAGCTGTACACTAGGAGTGAAGGGCACGTGGAGCTATGTAGAGCTCCATCAGGCTTCTaGCAATGTGATCCAGCATCC | + |
Preference number: 4 (lower is better) Translates to: ERCRELYTRSEGHVELCRAPSGF*QCDPAS Trigger: GGATGCTGGATCACATTGGCAGAAGCCTGATGGAGC...TCTACATAGCTCCACGTGCCCTTCACTCCTAGTGTACAGCTCACGGCATCTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192477.2 |
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CDS-3UTR TCA 90 bp | ACTCATTTAGGATCAATACAACGATCCCCAGTATACCTCACACATGGCACAGTCGCACATCACGGTGGGTaGGGTTCTCGGGGGTCCTAC | + |
Preference number: 4 (lower is better) Translates to: THLGSIQRSPVYLTHGTVAHHGG*GSRGSY Trigger: GTAGGACCCCCGAGAACCTCACCCACCGTGATGTGC...GACTGTGCCATGTGTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR TCA 90 bp | GAGAGATGCCGTGAGCTGTACACTAGGAGTGAAGGGCACGTGGAGCTATGTAGATCCTCAAACAGCCGGTaGCATTGCATCTGGATTCCT | + |
Preference number: 4 (lower is better) Translates to: ERCRELYTRSEGHVELCRSSNSR*HCIWIP Trigger: AGGAATCCAGATGCAATGTCACCGGCTGTTTGAGGA...TCTACATAGCTCCACGTGCCCTTCACTCCTAGTGTACAGCTCACGGCATCTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192477.2 |
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CDS-3UTR TCA 90 bp | TTCAGTTCTGTCCTAGGCAGGGGAAACTGTAAGGATGTAGTTATTGGGACAAGTCCCTCCACCTACCCCTaGAACCCCACCAACTGCCGA | + |
Preference number: 4 (lower is better) Translates to: FSSVLGRGNCKDVVIGTSPSTYP*NPTNCR Trigger: TCGGCAGTTGGTGGGGTTTCAGGGGTAGGTGGAGGG...ACTTGTCCCAATAACTACATCCTTACAGTTTCCCCTGCCTAGGACAGAACTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR GCA 90 bp | CTCGAATGTGACTTTTCCCAGGGTGGTAGGAGAGATGCCGTGAGCTGTACACTACATGAGGCTGAAGGCTaGAGGTTGGATTTCCCGGAT | + |
Preference number: 4 (lower is better) Translates to: LECDFSQGGRRDAVSCTLHEAEG*RLDFPD Trigger: ATCCGGGAAATCCAACCTGCAGCCTTCAGCCTCATG...TAGTGTACAGCTCACGGCATCTCTCCTACCACCCTGGGAAAAGTCACATTCGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192477.2 |
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CDS-3UTR GCA 90 bp | GCCGTGAGCTGTACACTAGGAGTGAAGGGCACGTGGAGCTATGTAGAGGAAGAAGGTGTTTCTGCAAACTaGTCACTTCCCAAGAGCACC | + |
Preference number: 4 (lower is better) Translates to: AVSCTLGVKGTWSYVEEEGVSAN*SLPKST Trigger: GGTGCTCTTGGGAAGTGAGCAGTTTGCAGAAACACC...TTCTTCCTCTACATAGCTCCACGTGCCCTTCACTCCTAGTGTACAGCTCACGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192477.2 |
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CDS-3UTR CCA 90 bp | AGAGATGCCGTGAGCTGTACACTAGGAGTGAAGGGCACGTGGAGCTATGTAGAGGGATTCTCTTCTAGCTaGAGCTCCATCAGGCTTCTG | + |
Preference number: 4 (lower is better) Translates to: RDAVSCTLGVKGTWSYVEGFSSS*SSIRLL Trigger: CAGAAGCCTGATGGAGCTCCAGCTAGAAGAGAATCC...CTCTACATAGCTCCACGTGCCCTTCACTCCTAGTGTACAGCTCACGGCATCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192477.2 |
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CDS-3UTR CCA 90 bp | ACTCATTTAGGATCAATACAACGATCCCCAGTATACCTCACACATGGCACAGTCGTGCGCACATCACGGTaGGTGAGGTTCTCGGGGGTC | + |
Preference number: 4 (lower is better) Translates to: THLGSIQRSPVYLTHGTVVRTSR*VRFSGV Trigger: GACCCCCGAGAACCTCACCCACCGTGATGTGCGCAC...GACTGTGCCATGTGTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR TCA 90 bp | TGCGAAGGCACTTCATTGATTAATGATCTGAGTATGGCCCTTCCTCAAAATCACGCACATCACGGTGGGTaGGGTTCTCGGGGGTCCTAC | + |
Preference number: 4 (lower is better) Translates to: CEGTSLINDLSMALPQNHAHHGG*GSRGSY Trigger: GTAGGACCCCCGAGAACCTCACCCACCGTGATGTGC...GTGATTTTGAGGAAGGGCCATACTCAGATCATTAATCAATGAAGTGCCTTCGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR GCA 90 bp | GAGAGATGCCGTGAGCTGTACACTAGGAGTGAAGGGCACGTGGAGCTATGTAGACCAGGTTGGGCAATATaGAGCATCTCTGGGCATAAA | + |
Preference number: 4 (lower is better) Translates to: ERCRELYTRSEGHVELCRPGWAI*SISGHK Trigger: TTTATGCCCAGAGATGCTGCATATTGCCCAACCTGG...TCTACATAGCTCCACGTGCCCTTCACTCCTAGTGTACAGCTCACGGCATCTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192477.2 |
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CDS-3UTR GCA 90 bp | CGTTTCAGTTCTGTCCTAGGCAGGGGAAACTGTAAGGATGTAGTTATTGGGACAGGTCTAGTAGCAGACTaGCACCACCACAACCTCCCC | + |
Preference number: 4 (lower is better) Translates to: RFSSVLGRGNCKDVVIGTGLVAD*HHHNLP Trigger: GGGGAGGTTGTGGTGGTGGCAGTCTGCTACTAGACC...TGTCCCAATAACTACATCCTTACAGTTTCCCCTGCCTAGGACAGAACTGAAACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CCA 90 bp | AGAGATGCCGTGAGCTGTACACTAGGAGTGAAGGGCACGTGGAGCTATGTAGAGGGCATTCAAGGGCCTTaGAAGGAGTTCAGAGATGTT | + |
Preference number: 4 (lower is better) Translates to: RDAVSCTLGVKGTWSYVEGIQGP*KEFRDV Trigger: AACATCTCTGAACTCCTTCCAAGGCCCTTGAATGCC...CTCTACATAGCTCCACGTGCCCTTCACTCCTAGTGTACAGCTCACGGCATCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192477.2 |
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CDS-3UTR CCA 90 bp | TCATTTAGGATCAATACAACGATCCCCAGTATACCTCACACATGGCACAGTCAAGTGCGCACATCACGGTaGGTGAGGTTCTCGGGGGTC | + |
Preference number: 4 (lower is better) Translates to: SFRINTTIPSIPHTWHSQVRTSR*VRFSGV Trigger: GACCCCCGAGAACCTCACCCACCGTGATGTGCGCAC...TTGACTGTGCCATGTGTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CCA 90 bp | TTCAGTTCTGTCCTAGGCAGGGGAAACTGTAAGGATGTAGTTATTGGGACAAGTTGGCACAGGGCCCCCTaGGGGAGAGAACTCATAAGG | + |
Preference number: 4 (lower is better) Translates to: FSSVLGRGNCKDVVIGTSWHRAP*GRELIR Trigger: CCTTATGAGTTCTCTCCCCCAGGGGGCCCTGTGCCA...ACTTGTCCCAATAACTACATCCTTACAGTTTCCCCTGCCTAGGACAGAACTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CCA 90 bp | ACTCATTTAGGATCAATACAACGATCCCCAGTATACCTCACACATGGCACAGTCTGGCACAGGGCCCCCTaGGGGAGAGAACTCATAAGG | + |
Preference number: 4 (lower is better) Translates to: THLGSIQRSPVYLTHGTVWHRAP*GRELIR Trigger: CCTTATGAGTTCTCTCCCCCAGGGGGCCCTGTGCCA...GACTGTGCCATGTGTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR TCA 90 bp | AGAGATGCCGTGAGCTGTACACTAGGAGTGAAGGGCACGTGGAGCTATGTAGAGGAGCGGTATATCTTCTaGATAAGATTGCTGCTCAGG | + |
Preference number: 4 (lower is better) Translates to: RDAVSCTLGVKGTWSYVEERYIF*IRLLLR Trigger: CCTGAGCAGCAATCTTATTCAGAAGATATACCGCTC...CTCTACATAGCTCCACGTGCCCTTCACTCCTAGTGTACAGCTCACGGCATCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192477.2 |
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CDS-3UTR TCA 90 bp | CTCGAATGTGACTTTTCCCAGGGTGGTAGGAGAGATGCCGTGAGCTGTACACTACCCAAGGATTCTCGTTaGGATCTATCTGCACAATGG | + |
Preference number: 4 (lower is better) Translates to: LECDFSQGGRRDAVSCTLPKDSR*DLSAQW Trigger: CCATTGTGCAGATAGATCTCAACGAGAATCCTTGGG...TAGTGTACAGCTCACGGCATCTCTCCTACCACCCTGGGAAAAGTCACATTCGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192477.2 |
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CDS-3UTR GCA 90 bp | CTCGAATGTGACTTTTCCCAGGGTGGTAGGAGAGATGCCGTGAGCTGTACACTAGCCAGGCATTCTCCTTaGTTGAAGATAAGTGGGGAA | + |
Preference number: 4 (lower is better) Translates to: LECDFSQGGRRDAVSCTLARHSP*LKISGE Trigger: TTCCCCACTTATCTTCAAGCAAGGAGAATGCCTGGC...TAGTGTACAGCTCACGGCATCTCTCCTACCACCCTGGGAAAAGTCACATTCGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192477.2 |
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CDS-3UTR GCA 90 bp | TCATTTAGGATCAATACAACGATCCCCAGTATACCTCACACATGGCACAGTCAACCACAAATCCCACTGTaGACGGAGCAGGCTGTGGCC | + |
Preference number: 4 (lower is better) Translates to: SFRINTTIPSIPHTWHSQPQIPL*TEQAVA Trigger: GGCCACAGCCTGCTCCGTGCACAGTGGGATTTGTGG...TTGACTGTGCCATGTGTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR GCA 90 bp | GTCTGCGAAGGCACTTCATTGATTAATGATCTGAGTATGGCCCTTCCTCAAAATCCACAAATCCCACTGTaGACGGAGCAGGCTGTGGCC | + |
Preference number: 4 (lower is better) Translates to: VCEGTSLINDLSMALPQNPQIPL*TEQAVA Trigger: GGCCACAGCCTGCTCCGTGCACAGTGGGATTTGTGG...ATTTTGAGGAAGGGCCATACTCAGATCATTAATCAATGAAGTGCCTTCGCAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CCA 90 bp | GCCGTGAGCTGTACACTAGGAGTGAAGGGCACGTGGAGCTATGTAGAGGAAGAAAACTTCGCAGTAGCATaGATCAAAACAGGGCTCATC | + |
Preference number: 4 (lower is better) Translates to: AVSCTLGVKGTWSYVEEENFAVA*IKTGLI Trigger: GATGAGCCCTGTTTTGATCCATGCTACTGCGAAGTT...TTCTTCCTCTACATAGCTCCACGTGCCCTTCACTCCTAGTGTACAGCTCACGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192477.2 |
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CDS-3UTR CCA 90 bp | CGTTTCAGTTCTGTCCTAGGCAGGGGAAACTGTAAGGATGTAGTTATTGGGACAAGGCTGGGGTGGAGATaGTCCAGGTTGGGCAATATG | + |
Preference number: 4 (lower is better) Translates to: RFSSVLGRGNCKDVVIGTRLGWR*SRLGNM Trigger: CATATTGCCCAACCTGGACCATCTCCACCCCAGCCT...TGTCCCAATAACTACATCCTTACAGTTTCCCCTGCCTAGGACAGAACTGAAACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR TCA 90 bp | CTCGAATGTGACTTTTCCCAGGGTGGTAGGAGAGATGCCGTGAGCTGTACACTAAGAGTTCAGTCTTCTTaGTTTCACGGAGATCCTTCC | + |
Preference number: 4 (lower is better) Translates to: LECDFSQGGRRDAVSCTLRVQSS*FHGDPS Trigger: GGAAGGATCTCCGTGAAATCAAGAAGACTGAACTCT...TAGTGTACAGCTCACGGCATCTCTCCTACCACCCTGGGAAAAGTCACATTCGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192477.2 |
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CDS-3UTR TCA 90 bp | ACTCATTTAGGATCAATACAACGATCCCCAGTATACCTCACACATGGCACAGTCATATACTCGTACACGTaGCCCACGGGAGGGGCTTTC | + |
Preference number: 4 (lower is better) Translates to: THLGSIQRSPVYLTHGTVIYSYT*PTGGAF Trigger: GAAAGCCCCTCCCGTGGGTCACGTGTACGAGTATAT...GACTGTGCCATGTGTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR GCA 90 bp | CGTTTCAGTTCTGTCCTAGGCAGGGGAAACTGTAAGGATGTAGTTATTGGGACAAGCCAGGGATGTACCTaGAAAGGCATCAGTTGGCAG | + |
Preference number: 4 (lower is better) Translates to: RFSSVLGRGNCKDVVIGTSQGCT*KGISWQ Trigger: CTGCCAACTGATGCCTTTGCAGGTACATCCCTGGCT...TGTCCCAATAACTACATCCTTACAGTTTCCCCTGCCTAGGACAGAACTGAAACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CCA 90 bp | ACTCATTTAGGATCAATACAACGATCCCCAGTATACCTCACACATGGCACAGTCAGGCTGGGGTGGAGATaGTCCAGGTTGGGCAATATG | + |
Preference number: 4 (lower is better) Translates to: THLGSIQRSPVYLTHGTVRLGWR*SRLGNM Trigger: CATATTGCCCAACCTGGACCATCTCCACCCCAGCCT...GACTGTGCCATGTGTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CCA 90 bp | GTCTGCGAAGGCACTTCATTGATTAATGATCTGAGTATGGCCCTTCCTCAAAATAATCAACACAGAAAGTaGCACAGGGCCCCCTGGGGG | + |
Preference number: 4 (lower is better) Translates to: VCEGTSLINDLSMALPQNNQHRK*HRAPWG Trigger: CCCCCAGGGGGCCCTGTGCCACTTTCTGTGTTGATT...ATTTTGAGGAAGGGCCATACTCAGATCATTAATCAATGAAGTGCCTTCGCAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
||
CDS-3UTR CCA 90 bp | ACTCATTTAGGATCAATACAACGATCCCCAGTATACCTCACACATGGCACAGTCCCACCATTCTTCTCATaGTGGCGGAACCCAGCCAAG | + |
Preference number: 4 (lower is better) Translates to: THLGSIQRSPVYLTHGTVPPFFS*WRNPAK Trigger: CTTGGCTGGGTTCCGCCACCATGAGAAGAATGGTGG...GACTGTGCCATGTGTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
||
CDS-3UTR CCA 90 bp | TTCAGTTCTGTCCTAGGCAGGGGAAACTGTAAGGATGTAGTTATTGGGACAAGTCCACCATTCTTCTCATaGTGGCGGAACCCAGCCAAG | + |
Preference number: 4 (lower is better) Translates to: FSSVLGRGNCKDVVIGTSPPFFS*WRNPAK Trigger: CTTGGCTGGGTTCCGCCACCATGAGAAGAATGGTGG...ACTTGTCCCAATAACTACATCCTTACAGTTTCCCCTGCCTAGGACAGAACTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
||
3UTR CAA 72 bp | GAAGAAATAGATCAAACCCGAACTAAGCGTATTAAGTaGCAGGGGAGGTGTGTGTGTGTGTGTGTGTGCGCG | + |
Preference number: 4 (lower is better) Translates to: EEIDQTRTKRIK*QGRCVCVCVCA Trigger: CGCGCACACACACACACACACACACCTCCCCTGCAACTTAATACGCTTAGTTCGGGTTTGATCTATTTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192477.2 |
||
CDS-3UTR TCA 90 bp | GAGAGGGGGAGCACACTTTTGTATTCTCTAGTTATCATGCGTTTCAGTTCTGTCAGTTCTTCCTCAAGTTaGGCCGAGCCAGGGATGTAC | + |
Preference number: 4 (lower is better) Translates to: ERGSTLLYSLVIMRFSSVSSSSS*AEPGMY Trigger: GTACATCCCTGGCTCGGCTCAACTTGAGGAAGAACT...GACAGAACTGAAACGCATGATAACTAGAGAATACAAAAGTGTGCTCCCCCTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
||
CDS-3UTR TCA 90 bp | ACTCATTTAGGATCAATACAACGATCCCCAGTATACCTCACACATGGCACAGTCACCTACCACGCTGACTaGGCTGATGGTTTCGATCCA | + |
Preference number: 4 (lower is better) Translates to: THLGSIQRSPVYLTHGTVTYHAD*ADGFDP Trigger: TGGATCGAAACCATCAGCTCAGTCAGCGTGGTAGGT...GACTGTGCCATGTGTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
||
CDS-3UTR TCA 90 bp | CGTTTCAGTTCTGTCCTAGGCAGGGGAAACTGTAAGGATGTAGTTATTGGGACAAGAGAACTCATAAGGTaGTGCACTTGTTGGTCCCCC | + |
Preference number: 4 (lower is better) Translates to: RFSSVLGRGNCKDVVIGTRELIR*CTCWSP Trigger: GGGGGACCAACAAGTGCATCACCTTATGAGTTCTCT...TGTCCCAATAACTACATCCTTACAGTTTCCCCTGCCTAGGACAGAACTGAAACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
||
CDS-3UTR TCA 90 bp | TGCGAAGGCACTTCATTGATTAATGATCTGAGTATGGCCCTTCCTCAAAATCACGGGTTTGGTGGTCTGTaGAGCCCTTTCCAGCTGAGA | + |
Preference number: 4 (lower is better) Translates to: CEGTSLINDLSMALPQNHGFGGL*SPFQLR Trigger: TCTCAGCTGGAAAGGGCTTCACAGACCACCAAACCC...GTGATTTTGAGGAAGGGCCATACTCAGATCATTAATCAATGAAGTGCCTTCGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
||
CDS-3UTR GCA 90 bp | TTCAGTTCTGTCCTAGGCAGGGGAAACTGTAAGGATGTAGTTATTGGGACAAGTGCTCCATCAGGCTTCTaGCAATGTGATCCAGCATCC | + |
Preference number: 4 (lower is better) Translates to: FSSVLGRGNCKDVVIGTSAPSGF*QCDPAS Trigger: GGATGCTGGATCACATTGGCAGAAGCCTGATGGAGC...ACTTGTCCCAATAACTACATCCTTACAGTTTCCCCTGCCTAGGACAGAACTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
||
CDS-3UTR GCA 90 bp | CTCGAATGTGACTTTTCCCAGGGTGGTAGGAGAGATGCCGTGAGCTGTACACTATCGTTGAGATCTATCTaGACAATGGCATTCAGGTGT | + |
Preference number: 4 (lower is better) Translates to: LECDFSQGGRRDAVSCTLSLRSI*TMAFRC Trigger: ACACCTGAATGCCATTGTGCAGATAGATCTCAACGA...TAGTGTACAGCTCACGGCATCTCTCCTACCACCCTGGGAAAAGTCACATTCGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192477.2 |
||
CDS-3UTR CCA 90 bp | ACTCATTTAGGATCAATACAACGATCCCCAGTATACCTCACACATGGCACAGTCGTGGTCTCGGTGTTCTaGGCTGTTTGGTGGGTTTTG | + |
Preference number: 4 (lower is better) Translates to: THLGSIQRSPVYLTHGTVVVSVF*AVWWVL Trigger: CAAAACCCACCAAACAGCCCAGAACACCGAGACCAC...GACTGTGCCATGTGTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
||
CDS-3UTR TCA 90 bp | GCCGTGAGCTGTACACTAGGAGTGAAGGGCACGTGGAGCTATGTAGAGGAAGAACTCATCGAATTCCTCTaGAGATACAGTTTAAAAGGT | + |
Preference number: 4 (lower is better) Translates to: AVSCTLGVKGTWSYVEEELIEFL*RYSLKG Trigger: ACCTTTTAAACTGTATCTTCAGAGGAATTCGATGAG...TTCTTCCTCTACATAGCTCCACGTGCCCTTCACTCCTAGTGTACAGCTCACGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192477.2 |
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CDS-3UTR TCA 90 bp | CTCGAATGTGACTTTTCCCAGGGTGGTAGGAGAGATGCCGTGAGCTGTACACTATCAAGCCAAGGTCATTaGTATGCAAATTGCATGTAC | + |
Preference number: 4 (lower is better) Translates to: LECDFSQGGRRDAVSCTLSSQGH*YANCMY Trigger: GTACATGCAATTTGCATATCAATGACCTTGGCTTGA...TAGTGTACAGCTCACGGCATCTCTCCTACCACCCTGGGAAAAGTCACATTCGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192477.2 |
||
CDS-3UTR TCA 90 bp | GTCTGCGAAGGCACTTCATTGATTAATGATCTGAGTATGGCCCTTCCTCAAAATACCTACCACGCTGACTaGGCTGATGGTTTCGATCCA | + |
Preference number: 4 (lower is better) Translates to: VCEGTSLINDLSMALPQNTYHAD*ADGFDP Trigger: TGGATCGAAACCATCAGCTCAGTCAGCGTGGTAGGT...ATTTTGAGGAAGGGCCATACTCAGATCATTAATCAATGAAGTGCCTTCGCAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR TCA 90 bp | GAGAGGGGGAGCACACTTTTGTATTCTCTAGTTATCATGCGTTTCAGTTCTGTCAGAGAAGGGTTTCTTTaGGCCTGGCATCCTGCTGTA | + |
Preference number: 4 (lower is better) Translates to: ERGSTLLYSLVIMRFSSVREGFL*AWHPAV Trigger: TACAGCAGGATGCCAGGCTCAAAGAAACCCTTCTCT...GACAGAACTGAAACGCATGATAACTAGAGAATACAAAAGTGTGCTCCCCCTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR GCA 90 bp | GCCGTGAGCTGTACACTAGGAGTGAAGGGCACGTGGAGCTATGTAGAGGAAGAATTGAATGTCCTGCAATaGATTGTTCCCAAGGTTAAT | + |
Preference number: 4 (lower is better) Translates to: AVSCTLGVKGTWSYVEEELNVLQ*IVPKVN Trigger: ATTAACCTTGGGAACAATGCATTGCAGGACATTCAA...TTCTTCCTCTACATAGCTCCACGTGCCCTTCACTCCTAGTGTACAGCTCACGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192477.2 |
||
CDS-3UTR GCA 90 bp | TGCGAAGGCACTTCATTGATTAATGATCTGAGTATGGCCCTTCCTCAAAATCACAGCCAGGGATGTACCTaGAAAGGCATCAGTTGGCAG | + |
Preference number: 4 (lower is better) Translates to: CEGTSLINDLSMALPQNHSQGCT*KGISWQ Trigger: CTGCCAACTGATGCCTTTGCAGGTACATCCCTGGCT...GTGATTTTGAGGAAGGGCCATACTCAGATCATTAATCAATGAAGTGCCTTCGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR GCA 90 bp | CACATTGAAGTTTACTCATTTAGGATCAATACAACGATCCCCAGTATACCTCACGGTCTAGTAGCAGACTaGCACCACCACAACCTCCCC | + |
Preference number: 4 (lower is better) Translates to: HIEVYSFRINTTIPSIPHGLVAD*HHHNLP Trigger: GGGGAGGTTGTGGTGGTGGCAGTCTGCTACTAGACC...GTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGAGTAAACTTCAATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR GCA 90 bp | AGCTGTACACTAGGAGTGAAGGGCACGTGGAGCTATGTAGAGGAAGAAATAGATTTGAGCCTGGCATCCTaGTGTAAGTCTGGATATTGC | + |
Preference number: 4 (lower is better) Translates to: SCTLGVKGTWSYVEEEIDLSLAS*CKSGYC Trigger: GCAATATCCAGACTTACAGCAGGATGCCAGGCTCAA...ATCTATTTCTTCCTCTACATAGCTCCACGTGCCCTTCACTCCTAGTGTACAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192477.2 |
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CDS-3UTR CCA 90 bp | GAGAGGGGGAGCACACTTTTGTATTCTCTAGTTATCATGCGTTTCAGTTCTGTCCCAGGATATAAAGCCTaGGATGTCGAAGGTGGTCTC | + |
Preference number: 4 (lower is better) Translates to: ERGSTLLYSLVIMRFSSVPGYKA*DVEGGL Trigger: GAGACCACCTTCGACATCCCAGGCTTTATATCCTGG...GACAGAACTGAAACGCATGATAACTAGAGAATACAAAAGTGTGCTCCCCCTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CCA 90 bp | GTCTGCGAAGGCACTTCATTGATTAATGATCTGAGTATGGCCCTTCCTCAAAATCTGAAGGCTGCAGGTTaGATTTCCCGGATGACGTTG | + |
Preference number: 4 (lower is better) Translates to: VCEGTSLINDLSMALPQNLKAAG*ISRMTL Trigger: CAACGTCATCCGGGAAATCCAACCTGCAGCCTTCAG...ATTTTGAGGAAGGGCCATACTCAGATCATTAATCAATGAAGTGCCTTCGCAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CCA 90 bp | GAGAGGGGGAGCACACTTTTGTATTCTCTAGTTATCATGCGTTTCAGTTCTGTCCTTTTGGGGGTTTGGTaGTCTGTGAAGCCCTTTCCA | + |
Preference number: 4 (lower is better) Translates to: ERGSTLLYSLVIMRFSSVLLGVW*SVKPFP Trigger: TGGAAAGGGCTTCACAGACCACCAAACCCCCAAAAG...GACAGAACTGAAACGCATGATAACTAGAGAATACAAAAGTGTGCTCCCCCTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR TCA 90 bp | CTCGAATGTGACTTTTCCCAGGGTGGTAGGAGAGATGCCGTGAGCTGTACACTACTGTCACAATGTATGTaGAAGAGGCTTTCTTTAACT | + |
Preference number: 4 (lower is better) Translates to: LECDFSQGGRRDAVSCTLLSQCM*KRLSLT Trigger: AGTTAAAGAAAGCCTCTTTCACATACATTGTGACAG...TAGTGTACAGCTCACGGCATCTCTCCTACCACCCTGGGAAAAGTCACATTCGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192477.2 |
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CDS-3UTR TCA 90 bp | ACTCATTTAGGATCAATACAACGATCCCCAGTATACCTCACACATGGCACAGTCCCCAAGGATTCTCGTTaGGATCTATCTGCACAATGG | + |
Preference number: 4 (lower is better) Translates to: THLGSIQRSPVYLTHGTVPKDSR*DLSAQW Trigger: CCATTGTGCAGATAGATCTCAACGAGAATCCTTGGG...GACTGTGCCATGTGTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR TCA 90 bp | TGCGAAGGCACTTCATTGATTAATGATCTGAGTATGGCCCTTCCTCAAAATCACAGAGAACTCATAAGGTaGTGCACTTGTTGGTCCCCC | + |
Preference number: 4 (lower is better) Translates to: CEGTSLINDLSMALPQNHRELIR*CTCWSP Trigger: GGGGGACCAACAAGTGCATCACCTTATGAGTTCTCT...GTGATTTTGAGGAAGGGCCATACTCAGATCATTAATCAATGAAGTGCCTTCGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR TCA 90 bp | CGTTTCAGTTCTGTCCTAGGCAGGGGAAACTGTAAGGATGTAGTTATTGGGACAAGCAACAAAGACAGCTaGGAAGAACAGAACCAAGAG | + |
Preference number: 4 (lower is better) Translates to: RFSSVLGRGNCKDVVIGTSNKDS*EEQNQE Trigger: CTCTTGGTTCTGTTCTTCTCAGCTGTCTTTGTTGCT...TGTCCCAATAACTACATCCTTACAGTTTCCCCTGCCTAGGACAGAACTGAAACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR TCA 90 bp | TGCGAAGGCACTTCATTGATTAATGATCTGAGTATGGCCCTTCCTCAAAATCACTCCTCAAACAGCCGGTaGCATTGCATCTGGATTCCT | + |
Preference number: 4 (lower is better) Translates to: CEGTSLINDLSMALPQNHSSNSR*HCIWIP Trigger: AGGAATCCAGATGCAATGTCACCGGCTGTTTGAGGA...GTGATTTTGAGGAAGGGCCATACTCAGATCATTAATCAATGAAGTGCCTTCGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR TCA 90 bp | CACATTGAAGTTTACTCATTTAGGATCAATACAACGATCCCCAGTATACCTCACGGGTTTGGTGGTCTGTaGAGCCCTTTCCAGCTGAGA | + |
Preference number: 4 (lower is better) Translates to: HIEVYSFRINTTIPSIPHGFGGL*SPFQLR Trigger: TCTCAGCTGGAAAGGGCTTCACAGACCACCAAACCC...GTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGAGTAAACTTCAATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR GCA 90 bp | TTCAGTTCTGTCCTAGGCAGGGGAAACTGTAAGGATGTAGTTATTGGGACAAGTGCCAGGCATTCTCCTTaGTTGAAGATAAGTGGGGAA | + |
Preference number: 4 (lower is better) Translates to: FSSVLGRGNCKDVVIGTSARHSP*LKISGE Trigger: TTCCCCACTTATCTTCAAGCAAGGAGAATGCCTGGC...ACTTGTCCCAATAACTACATCCTTACAGTTTCCCCTGCCTAGGACAGAACTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR GCA 90 bp | GTCTGCGAAGGCACTTCATTGATTAATGATCTGAGTATGGCCCTTCCTCAAAATGGACTAAGTCGCAAGTaGAGTCCCAAGGATTCTCGT | + |
Preference number: 4 (lower is better) Translates to: VCEGTSLINDLSMALPQNGLSRK*SPKDSR Trigger: ACGAGAATCCTTGGGACTGCACTTGCGACTTAGTCC...ATTTTGAGGAAGGGCCATACTCAGATCATTAATCAATGAAGTGCCTTCGCAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR GCA 90 bp | TGCGAAGGCACTTCATTGATTAATGATCTGAGTATGGCCCTTCCTCAAAATCACGGTGTTTCTGCAAACTaGTCACTTCCCAAGAGCACC | + |
Preference number: 4 (lower is better) Translates to: CEGTSLINDLSMALPQNHGVSAN*SLPKST Trigger: GGTGCTCTTGGGAAGTGAGCAGTTTGCAGAAACACC...GTGATTTTGAGGAAGGGCCATACTCAGATCATTAATCAATGAAGTGCCTTCGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR GCA 90 bp | TTCAGTTCTGTCCTAGGCAGGGGAAACTGTAAGGATGTAGTTATTGGGACAAGTCTCCTTGGGTGTTTCTaGAAACTGCTCACTTCCCAA | + |
Preference number: 4 (lower is better) Translates to: FSSVLGRGNCKDVVIGTSLLGCF*KLLTSQ Trigger: TTGGGAAGTGAGCAGTTTGCAGAAACACCCAAGGAG...ACTTGTCCCAATAACTACATCCTTACAGTTTCCCCTGCCTAGGACAGAACTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR GCA 90 bp | GAGAGGGGGAGCACACTTTTGTATTCTCTAGTTATCATGCGTTTCAGTTCTGTCCTCCTTGGGTGTTTCTaGAAACTGCTCACTTCCCAA | + |
Preference number: 4 (lower is better) Translates to: ERGSTLLYSLVIMRFSSVLLGCF*KLLTSQ Trigger: TTGGGAAGTGAGCAGTTTGCAGAAACACCCAAGGAG...GACAGAACTGAAACGCATGATAACTAGAGAATACAAAAGTGTGCTCCCCCTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CCA 90 bp | GAGAGGGGGAGCACACTTTTGTATTCTCTAGTTATCATGCGTTTCAGTTCTGTCCGGAGATCCTTCCCATaGAAATGGAAAGGTGTCTCA | + |
Preference number: 4 (lower is better) Translates to: ERGSTLLYSLVIMRFSSVRRSFP*KWKGVS Trigger: TGAGACACCTTTCCATTTCCATGGGAAGGATCTCCG...GACAGAACTGAAACGCATGATAACTAGAGAATACAAAAGTGTGCTCCCCCTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CCA 90 bp | ACTCATTTAGGATCAATACAACGATCCCCAGTATACCTCACACATGGCACAGTCAGAGGAAGGTTTAGTTaGCCAGGCATTCTCCTTGCT | + |
Preference number: 4 (lower is better) Translates to: THLGSIQRSPVYLTHGTVRGRFS*PGILLA Trigger: AGCAAGGAGAATGCCTGGCCAACTAAACCTTCCTCT...GACTGTGCCATGTGTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CCA 90 bp | TCATTTAGGATCAATACAACGATCCCCAGTATACCTCACACATGGCACAGTCAACCAGGATATAAAGCCTaGGATGTCGAAGGTGGTCTC | + |
Preference number: 4 (lower is better) Translates to: SFRINTTIPSIPHTWHSQPGYKA*DVEGGL Trigger: GAGACCACCTTCGACATCCCAGGCTTTATATCCTGG...TTGACTGTGCCATGTGTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CCA 90 bp | ACTCATTTAGGATCAATACAACGATCCCCAGTATACCTCACACATGGCACAGTCTCAGGTACAGCTTCTTaGCATTCAAGGGCCTTGGAA | + |
Preference number: 4 (lower is better) Translates to: THLGSIQRSPVYLTHGTVSGTAS*HSRALE Trigger: TTCCAAGGCCCTTGAATGCCAAGAAGCTGTACCTGA...GACTGTGCCATGTGTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CCA 90 bp | TTCAGTTCTGTCCTAGGCAGGGGAAACTGTAAGGATGTAGTTATTGGGACAAGTTGCAAAGGCATCAGTTaGCAGAGTCCTCAGCAAGTT | + |
Preference number: 4 (lower is better) Translates to: FSSVLGRGNCKDVVIGTSCKGIS*QSPQQV Trigger: AACTTGCTGAGGACTCTGCCAACTGATGCCTTTGCA...ACTTGTCCCAATAACTACATCCTTACAGTTTCCCCTGCCTAGGACAGAACTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CCA 90 bp | GAGAGGGGGAGCACACTTTTGTATTCTCTAGTTATCATGCGTTTCAGTTCTGTCTGCAAAGGCATCAGTTaGCAGAGTCCTCAGCAAGTT | + |
Preference number: 4 (lower is better) Translates to: ERGSTLLYSLVIMRFSSVCKGIS*QSPQQV Trigger: AACTTGCTGAGGACTCTGCCAACTGATGCCTTTGCA...GACAGAACTGAAACGCATGATAACTAGAGAATACAAAAGTGTGCTCCCCCTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CCA 90 bp | TGCGAAGGCACTTCATTGATTAATGATCTGAGTATGGCCCTTCCTCAAAATCACCTTTTGGGGGTTTGGTaGTCTGTGAAGCCCTTTCCA | + |
Preference number: 4 (lower is better) Translates to: CEGTSLINDLSMALPQNHLLGVW*SVKPFP Trigger: TGGAAAGGGCTTCACAGACCACCAAACCCCCAAAAG...GTGATTTTGAGGAAGGGCCATACTCAGATCATTAATCAATGAAGTGCCTTCGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR TCA 90 bp | CGTTTCAGTTCTGTCCTAGGCAGGGGAAACTGTAAGGATGTAGTTATTGGGACACTCATCTATTTCTTCTaGGTCCTCTATCAGGGGAAT | + |
Preference number: 4 (lower is better) Translates to: RFSSVLGRGNCKDVVIGTLIYFF*VLYQGN Trigger: ATTCCCCTGATAGAGGACTCAGAAGAAATAGATGAG...TGTCCCAATAACTACATCCTTACAGTTTCCCCTGCCTAGGACAGAACTGAAACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR TCA 90 bp | ACTCATTTAGGATCAATACAACGATCCCCAGTATACCTCACACATGGCACAGTCAGAGTTCAGTCTTCTTaGTTTCACGGAGATCCTTCC | + |
Preference number: 4 (lower is better) Translates to: THLGSIQRSPVYLTHGTVRVQSS*FHGDPS Trigger: GGAAGGATCTCCGTGAAATCAAGAAGACTGAACTCT...GACTGTGCCATGTGTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR TCA 90 bp | GAGAGGGGGAGCACACTTTTGTATTCTCTAGTTATCATGCGTTTCAGTTCTGTCCTCTTTCTTTGCAGTTaGCAGTCAAGCCAAGGTCAT | + |
Preference number: 4 (lower is better) Translates to: ERGSTLLYSLVIMRFSSVLFLCS*QSSQGH Trigger: ATGACCTTGGCTTGACTGTCAACTGCAAAGAAAGAG...GACAGAACTGAAACGCATGATAACTAGAGAATACAAAAGTGTGCTCCCCCTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR TCA 90 bp | TTCAGTTCTGTCCTAGGCAGGGGAAACTGTAAGGATGTAGTTATTGGGACAAGTGAGCGGTATATCTTCTaGATAAGATTGCTGCTCAGG | + |
Preference number: 4 (lower is better) Translates to: FSSVLGRGNCKDVVIGTSERYIF*IRLLLR Trigger: CCTGAGCAGCAATCTTATTCAGAAGATATACCGCTC...ACTTGTCCCAATAACTACATCCTTACAGTTTCCCCTGCCTAGGACAGAACTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
||
CDS-3UTR TCA 90 bp | GAGAGGGGGAGCACACTTTTGTATTCTCTAGTTATCATGCGTTTCAGTTCTGTCAGCAACAAAGACAGCTaGGAAGAACAGAACCAAGAG | + |
Preference number: 4 (lower is better) Translates to: ERGSTLLYSLVIMRFSSVSNKDS*EEQNQE Trigger: CTCTTGGTTCTGTTCTTCTCAGCTGTCTTTGTTGCT...GACAGAACTGAAACGCATGATAACTAGAGAATACAAAAGTGTGCTCCCCCTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR GCA 90 bp | CTCGAATGTGACTTTTCCCAGGGTGGTAGGAGAGATGCCGTGAGCTGTACACTAATCCTAGAGCAATTGTaGTTAGAAGAATTATCCACA | + |
Preference number: 4 (lower is better) Translates to: LECDFSQGGRRDAVSCTLILEQL*LEELST Trigger: TGTGGATAATTCTTCTAAGCACAATTGCTCTAGGAT...TAGTGTACAGCTCACGGCATCTCTCCTACCACCCTGGGAAAAGTCACATTCGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192477.2 |
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CDS-3UTR GCA 90 bp | CACATTGAAGTTTACTCATTTAGGATCAATACAACGATCCCCAGTATACCTCACCATGAGGCTGAAGGCTaGAGGTTGGATTTCCCGGAT | + |
Preference number: 4 (lower is better) Translates to: HIEVYSFRINTTIPSIPHHEAEG*RLDFPD Trigger: ATCCGGGAAATCCAACCTGCAGCCTTCAGCCTCATG...GTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGAGTAAACTTCAATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR GCA 90 bp | GAGAGGGGGAGCACACTTTTGTATTCTCTAGTTATCATGCGTTTCAGTTCTGTCATGGTTTCGATCCACTaGTTAAAGGGGACTAAGTCG | + |
Preference number: 4 (lower is better) Translates to: ERGSTLLYSLVIMRFSSVMVSIH*LKGTKS Trigger: CGACTTAGTCCCCTTTAAGCAGTGGATCGAAACCAT...GACAGAACTGAAACGCATGATAACTAGAGAATACAAAAGTGTGCTCCCCCTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR GCA 90 bp | TCATTTAGGATCAATACAACGATCCCCAGTATACCTCACACATGGCACAGTCAACCAGGTTGGGCAATATaGAGCATCTCTGGGCATAAA | + |
Preference number: 4 (lower is better) Translates to: SFRINTTIPSIPHTWHSQPGWAI*SISGHK Trigger: TTTATGCCCAGAGATGCTGCATATTGCCCAACCTGG...TTGACTGTGCCATGTGTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR GCA 90 bp | AGCTGTACACTAGGAGTGAAGGGCACGTGGAGCTATGTAGAGGAAGAAATAGATTTAATTTGGGCACTGTaGCATAGAGACAGTCCACAA | + |
Preference number: 4 (lower is better) Translates to: SCTLGVKGTWSYVEEEIDLIWAL*HRDSPQ Trigger: TTGTGGACTGTCTCTATGGCACAGTGCCCAAATTAA...ATCTATTTCTTCCTCTACATAGCTCCACGTGCCCTTCACTCCTAGTGTACAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192477.2 |
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CDS-3UTR CCA 90 bp | GAGAGGGGGAGCACACTTTTGTATTCTCTAGTTATCATGCGTTTCAGTTCTGTCAACTTCGCAGTAGCATaGATCAAAACAGGGCTCATC | + |
Preference number: 4 (lower is better) Translates to: ERGSTLLYSLVIMRFSSVNFAVA*IKTGLI Trigger: GATGAGCCCTGTTTTGATCCATGCTACTGCGAAGTT...GACAGAACTGAAACGCATGATAACTAGAGAATACAAAAGTGTGCTCCCCCTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CCA 90 bp | TTCAGTTCTGTCCTAGGCAGGGGAAACTGTAAGGATGTAGTTATTGGGACAAGTTCCTTCCCATGGAAATaGAAAGGTGTCTCACAGGTA | + |
Preference number: 4 (lower is better) Translates to: FSSVLGRGNCKDVVIGTSSFPWK*KGVSQV Trigger: TACCTGTGAGACACCTTTCCATTTCCATGGGAAGGA...ACTTGTCCCAATAACTACATCCTTACAGTTTCCCCTGCCTAGGACAGAACTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CCA 90 bp | TCATTTAGGATCAATACAACGATCCCCAGTATACCTCACACATGGCACAGTCAACGGAGATCCTTCCCATaGAAATGGAAAGGTGTCTCA | + |
Preference number: 4 (lower is better) Translates to: SFRINTTIPSIPHTWHSQRRSFP*KWKGVS Trigger: TGAGACACCTTTCCATTTCCATGGGAAGGATCTCCG...TTGACTGTGCCATGTGTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CCA 90 bp | TCATTTAGGATCAATACAACGATCCCCAGTATACCTCACACATGGCACAGTCAAAGAGGAAGGTTTAGTTaGCCAGGCATTCTCCTTGCT | + |
Preference number: 4 (lower is better) Translates to: SFRINTTIPSIPHTWHSQRGRFS*PGILLA Trigger: AGCAAGGAGAATGCCTGGCCAACTAAACCTTCCTCT...TTGACTGTGCCATGTGTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CCA 90 bp | TCATTTAGGATCAATACAACGATCCCCAGTATACCTCACACATGGCACAGTCAATCAGGTACAGCTTCTTaGCATTCAAGGGCCTTGGAA | + |
Preference number: 4 (lower is better) Translates to: SFRINTTIPSIPHTWHSQSGTAS*HSRALE Trigger: TTCCAAGGCCCTTGAATGCCAAGAAGCTGTACCTGA...TTGACTGTGCCATGTGTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CCA 90 bp | CGTTTCAGTTCTGTCCTAGGCAGGGGAAACTGTAAGGATGTAGTTATTGGGACAACCTCGGAACATACCTaGAGTCAGCTTTTCTATATC | + |
Preference number: 4 (lower is better) Translates to: RFSSVLGRGNCKDVVIGTTSEHT*SQLFYI Trigger: GATATAGAAAAGCTGACTCCAGGTATGTTCCGAGGT...TGTCCCAATAACTACATCCTTACAGTTTCCCCTGCCTAGGACAGAACTGAAACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CCA 90 bp | TCATTTAGGATCAATACAACGATCCCCAGTATACCTCACACATGGCACAGTCAAAAGGACACCAGCCACTaGCAGGTAGAGAAAGTAGTT | + |
Preference number: 4 (lower is better) Translates to: SFRINTTIPSIPHTWHSQKDTSH*QVEKVV Trigger: AACTACTTTCTCTACCTGCCAGTGGCTGGTGTCCTT...TTGACTGTGCCATGTGTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CCA 90 bp | GTCTGCGAAGGCACTTCATTGATTAATGATCTGAGTATGGCCCTTCCTCAAAATAAGGACACCAGCCACTaGCAGGTAGAGAAAGTAGTT | + |
Preference number: 4 (lower is better) Translates to: VCEGTSLINDLSMALPQNKDTSH*QVEKVV Trigger: AACTACTTTCTCTACCTGCCAGTGGCTGGTGTCCTT...ATTTTGAGGAAGGGCCATACTCAGATCATTAATCAATGAAGTGCCTTCGCAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CCA 90 bp | GAGAGGGGGAGCACACTTTTGTATTCTCTAGTTATCATGCGTTTCAGTTCTGTCGGAGTTCCTTTAATTTaGGCACTGTGCCATAGAGAC | + |
Preference number: 4 (lower is better) Translates to: ERGSTLLYSLVIMRFSSVGVPLI*ALCHRD Trigger: GTCTCTATGGCACAGTGCCCAAATTAAAGGAACTCC...GACAGAACTGAAACGCATGATAACTAGAGAATACAAAAGTGTGCTCCCCCTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR TCA 90 bp | TTCAGTTCTGTCCTAGGCAGGGGAAACTGTAAGGATGTAGTTATTGGGACAAGTAGCATTCTTCCTCTGTaGAGCATTTCAGCTATGCTT | + |
Preference number: 4 (lower is better) Translates to: FSSVLGRGNCKDVVIGTSSILPL*SISAML Trigger: AAGCATAGCTGAAATGCTTCACAGAGGAAGAATGCT...ACTTGTCCCAATAACTACATCCTTACAGTTTCCCCTGCCTAGGACAGAACTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR TCA 90 bp | TCATTTAGGATCAATACAACGATCCCCAGTATACCTCACACATGGCACAGTCAAGGGGCAATAGGAGGTTaGTTTGGACCAGGATATAAA | + |
Preference number: 4 (lower is better) Translates to: SFRINTTIPSIPHTWHSQGAIGG*FGPGYK Trigger: TTTATATCCTGGTCCAAATCAACCTCCTATTGCCCC...TTGACTGTGCCATGTGTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR TCA 90 bp | GTCTGCGAAGGCACTTCATTGATTAATGATCTGAGTATGGCCCTTCCTCAAAATCTCTTTCTTTGCAGTTaGCAGTCAAGCCAAGGTCAT | + |
Preference number: 4 (lower is better) Translates to: VCEGTSLINDLSMALPQNLFLCS*QSSQGH Trigger: ATGACCTTGGCTTGACTGTCAACTGCAAAGAAAGAG...ATTTTGAGGAAGGGCCATACTCAGATCATTAATCAATGAAGTGCCTTCGCAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR GCA 90 bp | TTCAGTTCTGTCCTAGGCAGGGGAAACTGTAAGGATGTAGTTATTGGGACAAGTCGATTGTTCCCTAGGTaGAAGAGATCCAAAGAAGAA | + |
Preference number: 4 (lower is better) Translates to: FSSVLGRGNCKDVVIGTSRLFPR*KRSKEE Trigger: TTCTTCTTTGGATCTCTTGCACCTAGGGAACAATCG...ACTTGTCCCAATAACTACATCCTTACAGTTTCCCCTGCCTAGGACAGAACTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR GCA 90 bp | TTCAGTTCTGTCCTAGGCAGGGGAAACTGTAAGGATGTAGTTATTGGGACAAGTTCGTTGAGATCTATCTaGACAATGGCATTCAGGTGT | + |
Preference number: 4 (lower is better) Translates to: FSSVLGRGNCKDVVIGTSSLRSI*TMAFRC Trigger: ACACCTGAATGCCATTGTGCAGATAGATCTCAACGA...ACTTGTCCCAATAACTACATCCTTACAGTTTCCCCTGCCTAGGACAGAACTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR GCA 90 bp | CACATTGAAGTTTACTCATTTAGGATCAATACAACGATCCCCAGTATACCTCACGGACTAAGTCGCAAGTaGAGTCCCAAGGATTCTCGT | + |
Preference number: 4 (lower is better) Translates to: HIEVYSFRINTTIPSIPHGLSRK*SPKDSR Trigger: ACGAGAATCCTTGGGACTGCACTTGCGACTTAGTCC...GTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGAGTAAACTTCAATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR GCA 90 bp | ACTCATTTAGGATCAATACAACGATCCCCAGTATACCTCACACATGGCACAGTCTTAATTTGGGCACTGTaGCATAGAGACAGTCCACAA | + |
Preference number: 4 (lower is better) Translates to: THLGSIQRSPVYLTHGTVLIWAL*HRDSPQ Trigger: TTGTGGACTGTCTCTATGGCACAGTGCCCAAATTAA...GACTGTGCCATGTGTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CCA 90 bp | TCATTTAGGATCAATACAACGATCCCCAGTATACCTCACACATGGCACAGTCAAGTGTTCTGGGCTGTTTaGTGGGTTTTGGTTGCTTAT | + |
Preference number: 4 (lower is better) Translates to: SFRINTTIPSIPHTWHSQVFWAV*WVLVAY Trigger: ATAAGCAACCAAAACCCACCAAACAGCCCAGAACAC...TTGACTGTGCCATGTGTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CCA 90 bp | TTCAGTTCTGTCCTAGGCAGGGGAAACTGTAAGGATGTAGTTATTGGGACAAGTGATCTATCTGCACAATaGCATTCAGGTGTTCAAGGA | + |
Preference number: 4 (lower is better) Translates to: FSSVLGRGNCKDVVIGTSDLSAQ*HSGVQG Trigger: TCCTTGAACACCTGAATGCCATTGTGCAGATAGATC...ACTTGTCCCAATAACTACATCCTTACAGTTTCCCCTGCCTAGGACAGAACTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CCA 90 bp | GTCTGCGAAGGCACTTCATTGATTAATGATCTGAGTATGGCCCTTCCTCAAAATGGAGTTCCTTTAATTTaGGCACTGTGCCATAGAGAC | + |
Preference number: 4 (lower is better) Translates to: VCEGTSLINDLSMALPQNGVPLI*ALCHRD Trigger: GTCTCTATGGCACAGTGCCCAAATTAAAGGAACTCC...ATTTTGAGGAAGGGCCATACTCAGATCATTAATCAATGAAGTGCCTTCGCAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR TCA 90 bp | GTCTGCGAAGGCACTTCATTGATTAATGATCTGAGTATGGCCCTTCCTCAAAATCTCATCTATTTCTTCTaGGTCCTCTATCAGGGGAAT | + |
Preference number: 4 (lower is better) Translates to: VCEGTSLINDLSMALPQNLIYFF*VLYQGN Trigger: ATTCCCCTGATAGAGGACTCAGAAGAAATAGATGAG...ATTTTGAGGAAGGGCCATACTCAGATCATTAATCAATGAAGTGCCTTCGCAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR TCA 90 bp | CGTTTCAGTTCTGTCCTAGGCAGGGGAAACTGTAAGGATGTAGTTATTGGGACACTCATCGAATTCCTCTaGAGATACAGTTTAAAAGGT | + |
Preference number: 4 (lower is better) Translates to: RFSSVLGRGNCKDVVIGTLIEFL*RYSLKG Trigger: ACCTTTTAAACTGTATCTTCAGAGGAATTCGATGAG...TGTCCCAATAACTACATCCTTACAGTTTCCCCTGCCTAGGACAGAACTGAAACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR TCA 90 bp | ACTCATTTAGGATCAATACAACGATCCCCAGTATACCTCACACATGGCACAGTCTTAAATGCTCCAGTTTaGATGTCCTGCAATGCATTG | + |
Preference number: 4 (lower is better) Translates to: THLGSIQRSPVYLTHGTVLNAPV*MSCNAL Trigger: CAATGCATTGCAGGACATTCAAACTGGAGCATTTAA...GACTGTGCCATGTGTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR TCA 90 bp | GAGAGGGGGAGCACACTTTTGTATTCTCTAGTTATCATGCGTTTCAGTTCTGTCGGAAGGTGTCATTTCTaGAGACATCTAGTTTGTTCT | + |
Preference number: 4 (lower is better) Translates to: ERGSTLLYSLVIMRFSSVGRCHF*RHLVCS Trigger: AGAACAAACTAGATGTCTTCAGAAATGACACCTTCC...GACAGAACTGAAACGCATGATAACTAGAGAATACAAAAGTGTGCTCCCCCTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR GCA 90 bp | TGCGAAGGCACTTCATTGATTAATGATCTGAGTATGGCCCTTCCTCAAAATCACCGATTGTTCCCTAGGTaGAAGAGATCCAAAGAAGAA | + |
Preference number: 4 (lower is better) Translates to: CEGTSLINDLSMALPQNHRLFPR*KRSKEE Trigger: TTCTTCTTTGGATCTCTTGCACCTAGGGAACAATCG...GTGATTTTGAGGAAGGGCCATACTCAGATCATTAATCAATGAAGTGCCTTCGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CCA 90 bp | ACTCATTTAGGATCAATACAACGATCCCCAGTATACCTCACACATGGCACAGTCCTGTTTGGTGGGTTTTaGTTGCTTATTAGAGGACTT | + |
Preference number: 4 (lower is better) Translates to: THLGSIQRSPVYLTHGTVLFGGF*LLIRGL Trigger: AAGTCCTCTAATAAGCAACCAAAACCCACCAAACAG...GACTGTGCCATGTGTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CCA 90 bp | CACATTGAAGTTTACTCATTTAGGATCAATACAACGATCCCCAGTATACCTCACGGCATTCAAGGGCCTTaGAAGGAGTTCAGAGATGTT | + |
Preference number: 4 (lower is better) Translates to: HIEVYSFRINTTIPSIPHGIQGP*KEFRDV Trigger: AACATCTCTGAACTCCTTCCAAGGCCCTTGAATGCC...GTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGAGTAAACTTCAATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CCA 90 bp | TGCGAAGGCACTTCATTGATTAATGATCTGAGTATGGCCCTTCCTCAAAATCACACCTCGGAACATACCTaGAGTCAGCTTTTCTATATC | + |
Preference number: 4 (lower is better) Translates to: CEGTSLINDLSMALPQNHTSEHT*SQLFYI Trigger: GATATAGAAAAGCTGACTCCAGGTATGTTCCGAGGT...GTGATTTTGAGGAAGGGCCATACTCAGATCATTAATCAATGAAGTGCCTTCGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CCA 90 bp | AAAGACACATTGAAGTTTACTCATTTAGGATCAATACAACGATCCCCAGTATACCTGAAGGCTGCAGGTTaGATTTCCCGGATGACGTTG | + |
Preference number: 4 (lower is better) Translates to: KDTLKFTHLGSIQRSPVYLKAAG*ISRMTL Trigger: CAACGTCATCCGGGAAATCCAACCTGCAGCCTTCAG...GTATACTGGGGATCGTTGTATTGATCCTAAATGAGTAAACTTCAATGTGTCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CCA 90 bp | GTCTGCGAAGGCACTTCATTGATTAATGATCTGAGTATGGCCCTTCCTCAAAATGATCTATCTGCACAATaGCATTCAGGTGTTCAAGGA | + |
Preference number: 4 (lower is better) Translates to: VCEGTSLINDLSMALPQNDLSAQ*HSGVQG Trigger: TCCTTGAACACCTGAATGCCATTGTGCAGATAGATC...ATTTTGAGGAAGGGCCATACTCAGATCATTAATCAATGAAGTGCCTTCGCAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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3UTR CAA 72 bp | TTCCTCAAAATCACATCTGAGAGGGGGAGCACACTTTaGTATTCTCTAGTTATCATGCGTTTCAGTTCTGTC | + |
Preference number: 4 (lower is better) Translates to: FLKITSERGSTL*YSLVIMRFSSV Trigger: GACAGAACTGAAACGCATGATAACTAGAGAATACAAAAGTGTGCTCCCCCTCTCAGATGTGATTTTGAGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR TCA 90 bp | GAGAGGGGGAGCACACTTTTGTATTCTCTAGTTATCATGCGTTTCAGTTCTGTCCAGAACTCAGTAATCTaGCTAATGTTTGTAAATCCC | + |
Preference number: 4 (lower is better) Translates to: ERGSTLLYSLVIMRFSSVQNSVI*LMFVNP Trigger: GGGATTTACAAACATTAGTCAGATTACTGAGTTCTG...GACAGAACTGAAACGCATGATAACTAGAGAATACAAAAGTGTGCTCCCCCTCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR TCA 90 bp | TCATTTAGGATCAATACAACGATCCCCAGTATACCTCACACATGGCACAGTCAATTAAATGCTCCAGTTTaGATGTCCTGCAATGCATTG | + |
Preference number: 4 (lower is better) Translates to: SFRINTTIPSIPHTWHSQLNAPV*MSCNAL Trigger: CAATGCATTGCAGGACATTCAAACTGGAGCATTTAA...TTGACTGTGCCATGTGTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR TCA 90 bp | GAGAGGGGGAGCACACTTTTGTATTCTCTAGTTATCATGCGTTTCAGTTCTGTCTCAGCAAGTTATTGTTaGGAAATAGCAGCTTCAAGT | + |
Preference number: 4 (lower is better) Translates to: ERGSTLLYSLVIMRFSSVSASYC*EIAASS Trigger: ACTTGAAGCTGCTATTTCTCAACAATAACTTGCTGA...GACAGAACTGAAACGCATGATAACTAGAGAATACAAAAGTGTGCTCCCCCTCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR TCA 90 bp | AAAGACACATTGAAGTTTACTCATTTAGGATCAATACAACGATCCCCAGTATACAGAGAAGGGTTTCTTTaGGCCTGGCATCCTGCTGTA | + |
Preference number: 4 (lower is better) Translates to: KDTLKFTHLGSIQRSPVYREGFL*AWHPAV Trigger: TACAGCAGGATGCCAGGCTCAAAGAAACCCTTCTCT...GTATACTGGGGATCGTTGTATTGATCCTAAATGAGTAAACTTCAATGTGTCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CCA 90 bp | AAAGACACATTGAAGTTTACTCATTTAGGATCAATACAACGATCCCCAGTATACGGATTCTCTTCTAGCTaGAGCTCCATCAGGCTTCTG | + |
Preference number: 4 (lower is better) Translates to: KDTLKFTHLGSIQRSPVYGFSSS*SSIRLL Trigger: CAGAAGCCTGATGGAGCTCCAGCTAGAAGAGAATCC...GTATACTGGGGATCGTTGTATTGATCCTAAATGAGTAAACTTCAATGTGTCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CCA 90 bp | ACTCATTTAGGATCAATACAACGATCCCCAGTATACCTCACACATGGCACAGTCGATGAAGCAGTAAAATaGACAGAAGACAACATAGAG | + |
Preference number: 4 (lower is better) Translates to: THLGSIQRSPVYLTHGTVDEAVK*TEDNIE Trigger: CTCTATGTTGTCTTCTGTCCATTTTACTGCTTCATC...GACTGTGCCATGTGTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR TCA 90 bp | GTCTGCGAAGGCACTTCATTGATTAATGATCTGAGTATGGCCCTTCCTCAAAATTTGGAAGCACGGGGATaGGATTATCATTTAAGATTA | + |
Preference number: 4 (lower is better) Translates to: VCEGTSLINDLSMALPQNLEARG*DYHLRL Trigger: TAATCTTAAATGATAATCTCATCCCCGTGCTTCCAA...ATTTTGAGGAAGGGCCATACTCAGATCATTAATCAATGAAGTGCCTTCGCAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR TCA 90 bp | TGCGAAGGCACTTCATTGATTAATGATCTGAGTATGGCCCTTCCTCAAAATCACTCAGCAAGTTATTGTTaGGAAATAGCAGCTTCAAGT | + |
Preference number: 4 (lower is better) Translates to: CEGTSLINDLSMALPQNHSASYC*EIAASS Trigger: ACTTGAAGCTGCTATTTCTCAACAATAACTTGCTGA...GTGATTTTGAGGAAGGGCCATACTCAGATCATTAATCAATGAAGTGCCTTCGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR GCA 90 bp | TTCAGTTCTGTCCTAGGCAGGGGAAACTGTAAGGATGTAGTTATTGGGACAAGTATCCTAGAGCAATTGTaGTTAGAAGAATTATCCACA | + |
Preference number: 4 (lower is better) Translates to: FSSVLGRGNCKDVVIGTSILEQL*LEELST Trigger: TGTGGATAATTCTTCTAAGCACAATTGCTCTAGGAT...ACTTGTCCCAATAACTACATCCTTACAGTTTCCCCTGCCTAGGACAGAACTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR GCA 90 bp | GTCTGCGAAGGCACTTCATTGATTAATGATCTGAGTATGGCCCTTCCTCAAAATTTGAATGTCCTGCAATaGATTGTTCCCAAGGTTAAT | + |
Preference number: 4 (lower is better) Translates to: VCEGTSLINDLSMALPQNLNVLQ*IVPKVN Trigger: ATTAACCTTGGGAACAATGCATTGCAGGACATTCAA...ATTTTGAGGAAGGGCCATACTCAGATCATTAATCAATGAAGTGCCTTCGCAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR GCA 90 bp | TTCAGTTCTGTCCTAGGCAGGGGAAACTGTAAGGATGTAGTTATTGGGACAAGTTTGGTGGGTTTTGGTTaGTTATTAGAGGACTTATAT | + |
Preference number: 4 (lower is better) Translates to: FSSVLGRGNCKDVVIGTSLVGFG*LLEDLY Trigger: ATATAAGTCCTCTAATAAGCAACCAAAACCCACCAA...ACTTGTCCCAATAACTACATCCTTACAGTTTCCCCTGCCTAGGACAGAACTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR GCA 90 bp | AAAGACACATTGAAGTTTACTCATTTAGGATCAATACAACGATCCCCAGTATACTTGAGCCTGGCATCCTaGTGTAAGTCTGGATATTGC | + |
Preference number: 4 (lower is better) Translates to: KDTLKFTHLGSIQRSPVYLSLAS*CKSGYC Trigger: GCAATATCCAGACTTACAGCAGGATGCCAGGCTCAA...GTATACTGGGGATCGTTGTATTGATCCTAAATGAGTAAACTTCAATGTGTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CCA 90 bp | TGCGAAGGCACTTCATTGATTAATGATCTGAGTATGGCCCTTCCTCAAAATCACGATGAAGCAGTAAAATaGACAGAAGACAACATAGAG | + |
Preference number: 4 (lower is better) Translates to: CEGTSLINDLSMALPQNHDEAVK*TEDNIE Trigger: CTCTATGTTGTCTTCTGTCCATTTTACTGCTTCATC...GTGATTTTGAGGAAGGGCCATACTCAGATCATTAATCAATGAAGTGCCTTCGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR TCA 90 bp | CACATTGAAGTTTACTCATTTAGGATCAATACAACGATCCCCAGTATACCTCACGGAAGGTGTCATTTCTaGAGACATCTAGTTTGTTCT | + |
Preference number: 4 (lower is better) Translates to: HIEVYSFRINTTIPSIPHGRCHF*RHLVCS Trigger: AGAACAAACTAGATGTCTTCAGAAATGACACCTTCC...GTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGAGTAAACTTCAATGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR TCA 90 bp | AAAGACACATTGAAGTTTACTCATTTAGGATCAATACAACGATCCCCAGTATACGGGGCAATAGGAGGTTaGTTTGGACCAGGATATAAA | + |
Preference number: 4 (lower is better) Translates to: KDTLKFTHLGSIQRSPVYGAIGG*FGPGYK Trigger: TTTATATCCTGGTCCAAATCAACCTCCTATTGCCCC...GTATACTGGGGATCGTTGTATTGATCCTAAATGAGTAAACTTCAATGTGTCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR GCA 90 bp | AAAGACACATTGAAGTTTACTCATTTAGGATCAATACAACGATCCCCAGTATACATGGTTTCGATCCACTaGTTAAAGGGGACTAAGTCG | + |
Preference number: 4 (lower is better) Translates to: KDTLKFTHLGSIQRSPVYMVSIH*LKGTKS Trigger: CGACTTAGTCCCCTTTAAGCAGTGGATCGAAACCAT...GTATACTGGGGATCGTTGTATTGATCCTAAATGAGTAAACTTCAATGTGTCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CCA 90 bp | CACATTGAAGTTTACTCATTTAGGATCAATACAACGATCCCCAGTATACCTCACCTGTTTGGTGGGTTTTaGTTGCTTATTAGAGGACTT | + |
Preference number: 4 (lower is better) Translates to: HIEVYSFRINTTIPSIPHLFGGF*LLIRGL Trigger: AAGTCCTCTAATAAGCAACCAAAACCCACCAAACAG...GTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGAGTAAACTTCAATGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CCA 90 bp | AAAGACACATTGAAGTTTACTCATTTAGGATCAATACAACGATCCCCAGTATACGTGTTCTGGGCTGTTTaGTGGGTTTTGGTTGCTTAT | + |
Preference number: 4 (lower is better) Translates to: KDTLKFTHLGSIQRSPVYVFWAV*WVLVAY Trigger: ATAAGCAACCAAAACCCACCAAACAGCCCAGAACAC...GTATACTGGGGATCGTTGTATTGATCCTAAATGAGTAAACTTCAATGTGTCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR TCA 90 bp | CACATTGAAGTTTACTCATTTAGGATCAATACAACGATCCCCAGTATACCTCACCAGAACTCAGTAATCTaGCTAATGTTTGTAAATCCC | + |
Preference number: 4 (lower is better) Translates to: HIEVYSFRINTTIPSIPHQNSVI*LMFVNP Trigger: GGGATTTACAAACATTAGTCAGATTACTGAGTTCTG...GTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGAGTAAACTTCAATGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR TCA 90 bp | CACATTGAAGTTTACTCATTTAGGATCAATACAACGATCCCCAGTATACCTCACTTGGAAGCACGGGGATaGGATTATCATTTAAGATTA | + |
Preference number: 4 (lower is better) Translates to: HIEVYSFRINTTIPSIPHLEARG*DYHLRL Trigger: TAATCTTAAATGATAATCTCATCCCCGTGCTTCCAA...GTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGAGTAAACTTCAATGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR TCA 90 bp | AAAGACACATTGAAGTTTACTCATTTAGGATCAATACAACGATCCCCAGTATACTCAAGCCAAGGTCATTaGTATGCAAATTGCATGTAC | + |
Preference number: 4 (lower is better) Translates to: KDTLKFTHLGSIQRSPVYSSQGH*YANCMY Trigger: GTACATGCAATTTGCATATCAATGACCTTGGCTTGA...GTATACTGGGGATCGTTGTATTGATCCTAAATGAGTAAACTTCAATGTGTCTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR GCA 90 bp | AAAGACACATTGAAGTTTACTCATTTAGGATCAATACAACGATCCCCAGTATACCTTAAGGCCATTAAATaGTCCAGTTTGAATGTCCTG | + |
Preference number: 4 (lower is better) Translates to: KDTLKFTHLGSIQRSPVYLKAIK*SSLNVL Trigger: CAGGACATTCAAACTGGAGCATTTAATGGCCTTAAG...GTATACTGGGGATCGTTGTATTGATCCTAAATGAGTAAACTTCAATGTGTCTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR TCA 90 bp | AAAGACACATTGAAGTTTACTCATTTAGGATCAATACAACGATCCCCAGTATACCTGTCACAATGTATGTaGAAGAGGCTTTCTTTAACT | + |
Preference number: 4 (lower is better) Translates to: KDTLKFTHLGSIQRSPVYLSQCM*KRLSLT Trigger: AGTTAAAGAAAGCCTCTTTCACATACATTGTGACAG...GTATACTGGGGATCGTTGTATTGATCCTAAATGAGTAAACTTCAATGTGTCTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR GCA 90 bp | AAAGACACATTGAAGTTTACTCATTTAGGATCAATACAACGATCCCCAGTATACTTGGTGGGTTTTGGTTaGTTATTAGAGGACTTATAT | + |
Preference number: 4 (lower is better) Translates to: KDTLKFTHLGSIQRSPVYLVGFG*LLEDLY Trigger: ATATAAGTCCTCTAATAAGCAACCAAAACCCACCAA...GTATACTGGGGATCGTTGTATTGATCCTAAATGAGTAAACTTCAATGTGTCTTT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS CCA 90 bp | GTGGGGTATATACTCGTACACGTGACCCACGGGAGGGGCTTTCTCTaGCGAGGACAGAGTTGGTCGCCCTCCACCTCCACTCCCACCACT | + |
Preference number: 5 (lower is better) Translates to: VGYILVHVTHGRGFL*RGQSWSPSTSTPTT Trigger: AGTGGTGGGAGTGGAGGTGGAGGGCGACCAACTCTGTCCTCGCCAGAGAAAGCCCCTCCCGTGGGTCACGTGTACGAGTATATACCCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS GCA 90 bp | GCGAGGACAGAGTTGGTCGCCCTCCACCTCCACTCCCACCACTGTTaGCTCCACTGTCCTCAAACAGCCGGTGACATTGCATCTGGATTC | + |
Preference number: 5 (lower is better) Translates to: ARTELVALHLHSHHC*LHCPQTAGDIASGF Trigger: GAATCCAGATGCAATGTCACCGGCTGTTTGAGGACAGTGGAGGCAACAGTGGTGGGAGTGGAGGTGGAGGGCGACCAACTCTGTCCTCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS TCA 90 bp | GGACACCAGCCACTGGCAGGTAGAGAAAGTAGTTCTTCCTCAAGTTaGGCCGAGCCAGGGATGTACCTGCAAAGGCATCAGTTGGCAGAG | + |
Preference number: 5 (lower is better) Translates to: GHQPLAGRESSSSSS*AEPGMYLQRHQLAE Trigger: CTCTGCCAACTGATGCCTTTGCAGGTACATCCCTGGCTCGGCTCAACTTGAGGAAGAACTACTTTCTCTACCTGCCAGTGGCTGGTGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS GCA 90 bp | TTAATTTGGGCACTGTGCCATAGAGACAGTCCACAAATCCCACTGTaGACGGAGCAGGCTGTGGCCTCTCACGGTCTAGTAGCAGACTGC | + |
Preference number: 5 (lower is better) Translates to: LIWALCHRDSPQIPL*TEQAVASHGLVADC Trigger: GCAGTCTGCTACTAGACCGTGAGAGGCCACAGCCTGCTCCGTGCACAGTGGGATTTGTGGACTGTCTCTATGGCACAGTGCCCAAATTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | GCCGTGAGCTGTACACTAGGAGTGAAGGGCACGTGGAGCTATGTAGAGGAAGAAGCTGAAGGCTGCAGGTaGGATTTCCCGGATGACGTT | + |
Preference number: 5 (lower is better) Translates to: AVSCTLGVKGTWSYVEEEAEGCR*DFPDDV Trigger: AACGTCATCCGGGAAATCCAACCTGCAGCCTTCAGC...TTCTTCCTCTACATAGCTCCACGTGCCCTTCACTCCTAGTGTACAGCTCACGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192477.2 |
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CDS CCA 90 bp | ATCTCTGGGCATAAAACTTCCAGCTCAATAGTGCGCACATCACGGTaGGTGAGGTTCTCGGGGGTCCTACAGAGTACATCACCTACCACG | + |
Preference number: 5 (lower is better) Translates to: ISGHKTSSSIVRTSR*VRFSGVLQSTSPTT Trigger: CGTGGTAGGTGATGTACTCTGTAGGACCCCCGAGAACCTCACCCACCGTGATGTGCGCACTATTGAGCTGGAAGTTTTATGCCCAGAGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS CCA 90 bp | GGGCTGCTGAGGCAGCCACTTCTTCCTCCTCTCGAGGCTTATAGATaGGGTTGTTACACATCTGAGTTACTGGGTGGGGTATATACTCGT | + |
Preference number: 5 (lower is better) Translates to: GLLRQPLLPPLEAYR*GCYTSELLGGVYTR Trigger: ACGAGTATATACCCCACCCAGTAACTCAGATGTGTAACAACCCCATCTATAAGCCTCGAGAGGAGGAAGAAGTGGCTGCCTCAGCAGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | GAGAGATGCCGTGAGCTGTACACTAGGAGTGAAGGGCACGTGGAGCTATGTAGAATCACTTTTGGGGGTTaGGTGGTCTGTGAAGCCCTT | + |
Preference number: 5 (lower is better) Translates to: ERCRELYTRSEGHVELCRITFGG*VVCEAL Trigger: AAGGGCTTCACAGACCACCAAACCCCCAAAAGTGAT...TCTACATAGCTCCACGTGCCCTTCACTCCTAGTGTACAGCTCACGGCATCTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000192477.2 |
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CDS GCA 90 bp | ACTAAGTCGCAAGTGCAGTCCCAAGGATTCTCGTTGAGATCTATCTaGACAATGGCATTCAGGTGTTCAAGGACACCAGCCACTGGCAGG | + |
Preference number: 5 (lower is better) Translates to: TKSQVQSQGFSLRSI*TMAFRCSRTPATGR Trigger: CCTGCCAGTGGCTGGTGTCCTTGAACACCTGAATGCCATTGTGCAGATAGATCTCAACGAGAATCCTTGGGACTGCACTTGCGACTTAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS GCA 90 bp | AGTACATCACCTACCACGCTGACTGAGCTGATGGTTTCGATCCACTaGTTAAAGGGGACTAAGTCGCAAGTGCAGTCCCAAGGATTCTCG | + |
Preference number: 5 (lower is better) Translates to: STSPTTLTELMVSIH*LKGTKSQVQSQGFS Trigger: CGAGAATCCTTGGGACTGCACTTGCGACTTAGTCCCCTTTAAGCAGTGGATCGAAACCATCAGCTCAGTCAGCGTGGTAGGTGATGTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | AGAGATGCCGTGAGCTGTACACTAGGAGTGAAGGGCACGTGGAGCTATGTAGAGAGGCATTCTCCTTGCTaGAAGATAAGTGGGGAATCC | + |
Preference number: 5 (lower is better) Translates to: RDAVSCTLGVKGTWSYVERHSPC*KISGES Trigger: GGATTCCCCACTTATCTTCAAGCAAGGAGAATGCCT...CTCTACATAGCTCCACGTGCCCTTCACTCCTAGTGTACAGCTCACGGCATCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | AGAGATGCCGTGAGCTGTACACTAGGAGTGAAGGGCACGTGGAGCTATGTAGAGAAGGTCCACACCTTCTaGTCTCTTGCTTCTAAAGGG | + |
Preference number: 5 (lower is better) Translates to: RDAVSCTLGVKGTWSYVEKVHTF*SLASKG Trigger: CCCTTTAGAAGCAAGAGACAAGAAGGTGTGGACCTT...CTCTACATAGCTCCACGTGCCCTTCACTCCTAGTGTACAGCTCACGGCATCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192477.2 |
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CDS CCA 90 bp | ATCTATCTGCACAATGGCATTCAGGTGTTCAAGGACACCAGCCACTaGCAGGTAGAGAAAGTAGTTCTTCCTCAAGTTGAGCCGAGCCAG | + |
Preference number: 5 (lower is better) Translates to: IYLHNGIQVFKDTSH*QVEKVVLPQVEPSQ Trigger: CTGGCTCGGCTCAACTTGAGGAAGAACTACTTTCTCTACCTGCCAGTGGCTGGTGTCCTTGAACACCTGAATGCCATTGTGCAGATAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS CCA 90 bp | CCTTCTCTTTTTCCAGCAAGGTCCTGTAGTTACTGTGGTTCTCCTTaGGTGTTTCTGCAAACTGCTCACTTCCCAAGAGCACCTCAGCCA | + |
Preference number: 5 (lower is better) Translates to: PSLFPARSCSYCGSP*VFLQTAHFPRAPQP Trigger: TGGCTGAGGTGCTCTTGGGAAGTGAGCAGTTTGCAGAAACACCCAAGGAGAACCACAGTAACTACAGGACCTTGCTGGAAAAAGAGAAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS TCA 90 bp | CCTCCACCTCAGAGTCAGACAACAGTGGACAGAGTTCAGTCTTCTTaGTTTCACGGAGATCCTTCCCATGGAAATGGAAAGGTGTCTCAC | + |
Preference number: 5 (lower is better) Translates to: PPPQSQTTVDRVQSS*FHGDPSHGNGKVSH Trigger: GTGAGACACCTTTCCATTTCCATGGGAAGGATCTCCGTGAAATCAAGAAGACTGAACTCTGTCCACTGTTGTCTGACTCTGAGGTGGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS GCA 90 bp | TACAGTTCCAAGGATTCTCTTCTAGCTGGAGCTCCATCAGGCTTCTaGCAATGTGATCCAGCATCCCACGGTAGAAGAGAACCTTTAACC | + |
Preference number: 5 (lower is better) Translates to: YSSKDSLLAGAPSGF*QCDPASHGRREPLT Trigger: GGTTAAAGGTTCTCTTCTACCGTGGGATGCTGGATCACATTGGCAGAAGCCTGATGGAGCTCCAGCTAGAAGAGAATCCTTGGAACTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS GCA 90 bp | GAGAAAGTAGTTCTTCCTCAAGTTGAGCCGAGCCAGGGATGTACCTaGAAAGGCATCAGTTGGCAGAGTCCTCAGCAAGTTATTGTTGAG | + |
Preference number: 5 (lower is better) Translates to: EKVVLPQVEPSQGCT*KGISWQSPQQVIVE Trigger: CTCAACAATAACTTGCTGAGGACTCTGCCAACTGATGCCTTTGCAGGTACATCCCTGGCTCGGCTCAACTTGAGGAAGAACTACTTTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS CCA 90 bp | AGTGGACAGAGTTCAGTCTTCTTGATTTCACGGAGATCCTTCCCATaGAAATGGAAAGGTGTCTCACAGGTAATGTCTCCCACCAGGGCT | + |
Preference number: 5 (lower is better) Translates to: SGQSSVFLISRRSFP*KWKGVSQVMSPTRA Trigger: AGCCCTGGTGGGAGACATTACCTGTGAGACACCTTTCCATTTCCATGGGAAGGATCTCCGTGAAATCAAGAAGACTGAACTCTGTCCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | AGAGATGCCGTGAGCTGTACACTAGGAGTGAAGGGCACGTGGAGCTATGTAGAGACAGCTTTAAATAAATaGGTTGGAAGCACGGGGATG | + |
Preference number: 5 (lower is better) Translates to: RDAVSCTLGVKGTWSYVETALNK*VGSTGM Trigger: CATCCCCGTGCTTCCAACCAATTTATTTAAAGCTGT...CTCTACATAGCTCCACGTGCCCTTCACTCCTAGTGTACAGCTCACGGCATCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | CGTTTCAGTTCTGTCCTAGGCAGGGGAAACTGTAAGGATGTAGTTATTGGGACATGGAGATGGTCCAGGTaGGGCAATATGCAGCATCTC | + |
Preference number: 5 (lower is better) Translates to: RFSSVLGRGNCKDVVIGTWRWSR*GNMQHL Trigger: GAGATGCTGCATATTGCCCAACCTGGACCATCTCCA...TGTCCCAATAACTACATCCTTACAGTTTCCCCTGCCTAGGACAGAACTGAAACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | TGCGAAGGCACTTCATTGATTAATGATCTGAGTATGGCCCTTCCTCAAAATCACCCACTCCCACCACTGTaGCCTCCACTGTCCTCAAAC | + |
Preference number: 5 (lower is better) Translates to: CEGTSLINDLSMALPQNHPLPPL*PPLSSN Trigger: GTTTGAGGACAGTGGAGGCAACAGTGGTGGGAGTGG...GTGATTTTGAGGAAGGGCCATACTCAGATCATTAATCAATGAAGTGCCTTCGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | GAGAGATGCCGTGAGCTGTACACTAGGAGTGAAGGGCACGTGGAGCTATGTAGATCCATCCTAGAGCAATaGTGCTTAGAAGAATTATCC | + |
Preference number: 5 (lower is better) Translates to: ERCRELYTRSEGHVELCRSILEQ*CLEELS Trigger: GGATAATTCTTCTAAGCACAATTGCTCTAGGATGGA...TCTACATAGCTCCACGTGCCCTTCACTCCTAGTGTACAGCTCACGGCATCTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | TTCAGTTCTGTCCTAGGCAGGGGAAACTGTAAGGATGTAGTTATTGGGACAAGTGGCCAGGCATTCTCCTaGCTTGAAGATAAGTGGGGA | + |
Preference number: 5 (lower is better) Translates to: FSSVLGRGNCKDVVIGTSGQAFS*LEDKWG Trigger: TCCCCACTTATCTTCAAGCAAGGAGAATGCCTGGCC...ACTTGTCCCAATAACTACATCCTTACAGTTTCCCCTGCCTAGGACAGAACTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | CGTTTCAGTTCTGTCCTAGGCAGGGGAAACTGTAAGGATGTAGTTATTGGGACAGGTGTTCTGGGCTGTTaGGTGGGTTTTGGTTGCTTA | + |
Preference number: 5 (lower is better) Translates to: RFSSVLGRGNCKDVVIGTGVLGC*VGFGCL Trigger: TAAGCAACCAAAACCCACCAAACAGCCCAGAACACC...TGTCCCAATAACTACATCCTTACAGTTTCCCCTGCCTAGGACAGAACTGAAACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | AGCTGTACACTAGGAGTGAAGGGCACGTGGAGCTATGTAGAGGAAGAAATAGATTGGCATTCAAGGGCCTaGGAAGGAGTTCAGAGATGT | + |
Preference number: 5 (lower is better) Translates to: SCTLGVKGTWSYVEEEIDWHSRA*EGVQRC Trigger: ACATCTCTGAACTCCTTCCAAGGCCCTTGAATGCCA...ATCTATTTCTTCCTCTACATAGCTCCACGTGCCCTTCACTCCTAGTGTACAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | GAGAGGGGGAGCACACTTTTGTATTCTCTAGTTATCATGCGTTTCAGTTCTGTCCTCAGGTACAGCTTCTaGGCATTCAAGGGCCTTGGA | + |
Preference number: 5 (lower is better) Translates to: ERGSTLLYSLVIMRFSSVLRYSF*AFKGLG Trigger: TCCAAGGCCCTTGAATGCCAAGAAGCTGTACCTGAG...GACAGAACTGAAACGCATGATAACTAGAGAATACAAAAGTGTGCTCCCCCTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | TCATTTAGGATCAATACAACGATCCCCAGTATACCTCACACATGGCACAGTCAAGCTGAAGGCTGCAGGTaGGATTTCCCGGATGACGTT | + |
Preference number: 5 (lower is better) Translates to: SFRINTTIPSIPHTWHSQAEGCR*DFPDDV Trigger: AACGTCATCCGGGAAATCCAACCTGCAGCCTTCAGC...TTGACTGTGCCATGTGTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | TTCAGTTCTGTCCTAGGCAGGGGAAACTGTAAGGATGTAGTTATTGGGACAAGTCTGCAAAGGCATCAGTaGGCAGAGTCCTCAGCAAGT | + |
Preference number: 5 (lower is better) Translates to: FSSVLGRGNCKDVVIGTSLQRHQ*AESSAS Trigger: ACTTGCTGAGGACTCTGCCAACTGATGCCTTTGCAG...ACTTGTCCCAATAACTACATCCTTACAGTTTCCCCTGCCTAGGACAGAACTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS CCA 90 bp | ATGCAAATTGCATGTACACCCAGTAGGACATATAATGGGAATGGGTaGTCTAGTCTGATAGGGGGCAATAGGAGGTTGATTTGGACCAGG | + |
Preference number: 5 (lower is better) Translates to: MQIACTPSRTYNGNG*SSLIGGNRRLIWTR Trigger: CCTGGTCCAAATCAACCTCCTATTGCCCCCTATCAGACTAGACCACCCATTCCCATTATATGTCCTACTGGGTGTACATGCAATTTGCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
||
CDS-3UTR CAA 90 bp | TGCGAAGGCACTTCATTGATTAATGATCTGAGTATGGCCCTTCCTCAAAATCACGGCCAGGCATTCTCCTaGCTTGAAGATAAGTGGGGA | + |
Preference number: 5 (lower is better) Translates to: CEGTSLINDLSMALPQNHGQAFS*LEDKWG Trigger: TCCCCACTTATCTTCAAGCAAGGAGAATGCCTGGCC...GTGATTTTGAGGAAGGGCCATACTCAGATCATTAATCAATGAAGTGCCTTCGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | GAGAGGGGGAGCACACTTTTGTATTCTCTAGTTATCATGCGTTTCAGTTCTGTCGGTGTTCTGGGCTGTTaGGTGGGTTTTGGTTGCTTA | + |
Preference number: 5 (lower is better) Translates to: ERGSTLLYSLVIMRFSSVGVLGC*VGFGCL Trigger: TAAGCAACCAAAACCCACCAAACAGCCCAGAACACC...GACAGAACTGAAACGCATGATAACTAGAGAATACAAAAGTGTGCTCCCCCTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | GAGAGATGCCGTGAGCTGTACACTAGGAGTGAAGGGCACGTGGAGCTATGTAGAAGGAGTTCAGAGATGTaGTTAAATCCTCTTTCTTTG | + |
Preference number: 5 (lower is better) Translates to: ERCRELYTRSEGHVELCRRSSEM*LNPLSL Trigger: CAAAGAAAGAGGATTTAACAACATCTCTGAACTCCT...TCTACATAGCTCCACGTGCCCTTCACTCCTAGTGTACAGCTCACGGCATCTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192477.2 |
||
CDS-3UTR CAA 90 bp | GTCTGCGAAGGCACTTCATTGATTAATGATCTGAGTATGGCCCTTCCTCAAAATCTCAGGTACAGCTTCTaGGCATTCAAGGGCCTTGGA | + |
Preference number: 5 (lower is better) Translates to: VCEGTSLINDLSMALPQNLRYSF*AFKGLG Trigger: TCCAAGGCCCTTGAATGCCAAGAAGCTGTACCTGAG...ATTTTGAGGAAGGGCCATACTCAGATCATTAATCAATGAAGTGCCTTCGCAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | AGCTGTACACTAGGAGTGAAGGGCACGTGGAGCTATGTAGAGGAAGAAATAGATAAACAGCCGGTGACATaGCATCTGGATTCCTGTAAG | + |
Preference number: 5 (lower is better) Translates to: SCTLGVKGTWSYVEEEIDKQPVT*HLDSCK Trigger: CTTACAGGAATCCAGATGCAATGTCACCGGCTGTTT...ATCTATTTCTTCCTCTACATAGCTCCACGTGCCCTTCACTCCTAGTGTACAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | ACTCATTTAGGATCAATACAACGATCCCCAGTATACCTCACACATGGCACAGTCAAGAGAAGGGTTTCTTaGAGCCTGGCATCCTGCTGT | + |
Preference number: 5 (lower is better) Translates to: THLGSIQRSPVYLTHGTVKRRVS*SLASCC Trigger: ACAGCAGGATGCCAGGCTCAAAGAAACCCTTCTCTT...GACTGTGCCATGTGTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | AGCTGTACACTAGGAGTGAAGGGCACGTGGAGCTATGTAGAGGAAGAAATAGATATGTCCTGCAATGCATaGTTCCCAAGGTTAATGGAC | + |
Preference number: 5 (lower is better) Translates to: SCTLGVKGTWSYVEEEIDMSCNA*FPRLMD Trigger: GTCCATTAACCTTGGGAACAATGCATTGCAGGACAT...ATCTATTTCTTCCTCTACATAGCTCCACGTGCCCTTCACTCCTAGTGTACAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | CGTTTCAGTTCTGTCCTAGGCAGGGGAAACTGTAAGGATGTAGTTATTGGGACACAGAGTTCAGTCTTCTaGATTTCACGGAGATCCTTC | + |
Preference number: 5 (lower is better) Translates to: RFSSVLGRGNCKDVVIGTQSSVF*ISRRSF Trigger: GAAGGATCTCCGTGAAATCAAGAAGACTGAACTCTG...TGTCCCAATAACTACATCCTTACAGTTTCCCCTGCCTAGGACAGAACTGAAACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | GAGAGGGGGAGCACACTTTTGTATTCTCTAGTTATCATGCGTTTCAGTTCTGTCAGGCATTCTCCTTGCTaGAAGATAAGTGGGGAATCC | + |
Preference number: 5 (lower is better) Translates to: ERGSTLLYSLVIMRFSSVRHSPC*KISGES Trigger: GGATTCCCCACTTATCTTCAAGCAAGGAGAATGCCT...GACAGAACTGAAACGCATGATAACTAGAGAATACAAAAGTGTGCTCCCCCTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | TCATTTAGGATCAATACAACGATCCCCAGTATACCTCACACATGGCACAGTCAATGGCATTCAAGGGCCTaGGAAGGAGTTCAGAGATGT | + |
Preference number: 5 (lower is better) Translates to: SFRINTTIPSIPHTWHSQWHSRA*EGVQRC Trigger: ACATCTCTGAACTCCTTCCAAGGCCCTTGAATGCCA...TTGACTGTGCCATGTGTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | TCATTTAGGATCAATACAACGATCCCCAGTATACCTCACACATGGCACAGTCAAAATAGCAGCTTCAAGTaGGGCATGAGGCTGAAGGCT | + |
Preference number: 5 (lower is better) Translates to: SFRINTTIPSIPHTWHSQNSSFK*GMRLKA Trigger: AGCCTTCAGCCTCATGCCCAACTTGAAGCTGCTATT...TTGACTGTGCCATGTGTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | TTCAGTTCTGTCCTAGGCAGGGGAAACTGTAAGGATGTAGTTATTGGGACAAGTAAACAGCCGGTGACATaGCATCTGGATTCCTGTAAG | + |
Preference number: 5 (lower is better) Translates to: FSSVLGRGNCKDVVIGTSKQPVT*HLDSCK Trigger: CTTACAGGAATCCAGATGCAATGTCACCGGCTGTTT...ACTTGTCCCAATAACTACATCCTTACAGTTTCCCCTGCCTAGGACAGAACTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | ACTCATTTAGGATCAATACAACGATCCCCAGTATACCTCACACATGGCACAGTCTTACTGTGGTTCTCCTaGGGTGTTTCTGCAAACTGC | + |
Preference number: 5 (lower is better) Translates to: THLGSIQRSPVYLTHGTVLLWFS*GVSANC Trigger: GCAGTTTGCAGAAACACCCAAGGAGAACCACAGTAA...GACTGTGCCATGTGTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | TGCGAAGGCACTTCATTGATTAATGATCTGAGTATGGCCCTTCCTCAAAATCACAAGAGAAGGGTTTCTTaGAGCCTGGCATCCTGCTGT | + |
Preference number: 5 (lower is better) Translates to: CEGTSLINDLSMALPQNHKRRVS*SLASCC Trigger: ACAGCAGGATGCCAGGCTCAAAGAAACCCTTCTCTT...GTGATTTTGAGGAAGGGCCATACTCAGATCATTAATCAATGAAGTGCCTTCGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | TCATTTAGGATCAATACAACGATCCCCAGTATACCTCACACATGGCACAGTCAAATCACTTTTGGGGGTTaGGTGGTCTGTGAAGCCCTT | + |
Preference number: 5 (lower is better) Translates to: SFRINTTIPSIPHTWHSQITFGG*VVCEAL Trigger: AAGGGCTTCACAGACCACCAAACCCCCAAAAGTGAT...TTGACTGTGCCATGTGTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS GCA 90 bp | GTCGAAGGTGGTCTCGGTGTTCTGGGCTGTTTGGTGGGTTTTGGTTaGTTATTAGAGGACTTATATTCAACAGATGAAGCAGTAAAATGG | + |
Preference number: 5 (lower is better) Translates to: VEGGLGVLGCLVGFG*LLEDLYSTDEAVKW Trigger: CCATTTTACTGCTTCATCTGTTGAATATAAGTCCTCTAATAAGCAACCAAAACCCACCAAACAGCCCAGAACACCGAGACCACCTTCGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | CGTTTCAGTTCTGTCCTAGGCAGGGGAAACTGTAAGGATGTAGTTATTGGGACAACAGCTTTAAATAAATaGGTTGGAAGCACGGGGATG | + |
Preference number: 5 (lower is better) Translates to: RFSSVLGRGNCKDVVIGTTALNK*VGSTGM Trigger: CATCCCCGTGCTTCCAACCAATTTATTTAAAGCTGT...TGTCCCAATAACTACATCCTTACAGTTTCCCCTGCCTAGGACAGAACTGAAACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | ACTCATTTAGGATCAATACAACGATCCCCAGTATACCTCACACATGGCACAGTCCAGAGTTCAGTCTTCTaGATTTCACGGAGATCCTTC | + |
Preference number: 5 (lower is better) Translates to: THLGSIQRSPVYLTHGTVQSSVF*ISRRSF Trigger: GAAGGATCTCCGTGAAATCAAGAAGACTGAACTCTG...GACTGTGCCATGTGTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | AGCTGTACACTAGGAGTGAAGGGCACGTGGAGCTATGTAGAGGAAGAAATAGATGTCCTCAGCAAGTTATaGTTGAGAAATAGCAGCTTC | + |
Preference number: 5 (lower is better) Translates to: SCTLGVKGTWSYVEEEIDVLSKL*LRNSSF Trigger: GAAGCTGCTATTTCTCAACAATAACTTGCTGAGGAC...ATCTATTTCTTCCTCTACATAGCTCCACGTGCCCTTCACTCCTAGTGTACAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | CACATTGAAGTTTACTCATTTAGGATCAATACAACGATCCCCAGTATACCTCACTGGAGATGGTCCAGGTaGGGCAATATGCAGCATCTC | + |
Preference number: 5 (lower is better) Translates to: HIEVYSFRINTTIPSIPHWRWSR*GNMQHL Trigger: GAGATGCTGCATATTGCCCAACCTGGACCATCTCCA...GTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGAGTAAACTTCAATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | TTCAGTTCTGTCCTAGGCAGGGGAAACTGTAAGGATGTAGTTATTGGGACAAGTACACCTTCTTGTCTCTaGCTTCTAAAGGGCAACTTC | + |
Preference number: 5 (lower is better) Translates to: FSSVLGRGNCKDVVIGTSTPSCL*LLKGNF Trigger: GAAGTTGCCCTTTAGAAGCAAGAGACAAGAAGGTGT...ACTTGTCCCAATAACTACATCCTTACAGTTTCCCCTGCCTAGGACAGAACTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | AAAGACACATTGAAGTTTACTCATTTAGGATCAATACAACGATCCCCAGTATACCCACTCCCACCACTGTaGCCTCCACTGTCCTCAAAC | + |
Preference number: 5 (lower is better) Translates to: KDTLKFTHLGSIQRSPVYPLPPL*PPLSSN Trigger: GTTTGAGGACAGTGGAGGCAACAGTGGTGGGAGTGG...GTATACTGGGGATCGTTGTATTGATCCTAAATGAGTAAACTTCAATGTGTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | TCATTTAGGATCAATACAACGATCCCCAGTATACCTCACACATGGCACAGTCAAATGTCCTGCAATGCATaGTTCCCAAGGTTAATGGAC | + |
Preference number: 5 (lower is better) Translates to: SFRINTTIPSIPHTWHSQMSCNA*FPRLMD Trigger: GTCCATTAACCTTGGGAACAATGCATTGCAGGACAT...TTGACTGTGCCATGTGTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | AGCTGTACACTAGGAGTGAAGGGCACGTGGAGCTATGTAGAGGAAGAAATAGATCTCAGCAAGTTATTGTaGAGAAATAGCAGCTTCAAG | + |
Preference number: 5 (lower is better) Translates to: SCTLGVKGTWSYVEEEIDLSKLL*RNSSFK Trigger: CTTGAAGCTGCTATTTCTCAACAATAACTTGCTGAG...ATCTATTTCTTCCTCTACATAGCTCCACGTGCCCTTCACTCCTAGTGTACAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | TCATTTAGGATCAATACAACGATCCCCAGTATACCTCACACATGGCACAGTCAATCCCAAGGATTCTCGTaGAGATCTATCTGCACAATG | + |
Preference number: 5 (lower is better) Translates to: SFRINTTIPSIPHTWHSQSQGFS*RSICTM Trigger: CATTGTGCAGATAGATCTCAACGAGAATCCTTGGGA...TTGACTGTGCCATGTGTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS CCA 90 bp | TTCGAAGTACAAGTAATGCAAGCTCTGCAGACCTCGGAACATACCTaGAGTCAGCTTTTCTATATCATTGCCATTGAGAAAGAGACTCTT | + |
Preference number: 5 (lower is better) Translates to: FEVQVMQALQTSEHT*SQLFYIIAIEKETL Trigger: AAGAGTCTCTTTCTCAATGGCAATGATATAGAAAAGCTGACTCCAGGTATGTTCCGAGGTCTGCAGAGCTTGCATTACTTGTACTTCGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | GAGAGGGGGAGCACACTTTTGTATTCTCTAGTTATCATGCGTTTCAGTTCTGTCTCATTGATATGCAAATaGCATGTACACCCAGTAGGA | + |
Preference number: 5 (lower is better) Translates to: ERGSTLLYSLVIMRFSSVSLICK*HVHPVG Trigger: TCCTACTGGGTGTACATGCAATTTGCATATCAATGA...GACAGAACTGAAACGCATGATAACTAGAGAATACAAAAGTGTGCTCCCCCTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | TTCAGTTCTGTCCTAGGCAGGGGAAACTGTAAGGATGTAGTTATTGGGACAAGTTCATTGATATGCAAATaGCATGTACACCCAGTAGGA | + |
Preference number: 5 (lower is better) Translates to: FSSVLGRGNCKDVVIGTSSLICK*HVHPVG Trigger: TCCTACTGGGTGTACATGCAATTTGCATATCAATGA...ACTTGTCCCAATAACTACATCCTTACAGTTTCCCCTGCCTAGGACAGAACTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | TTCAGTTCTGTCCTAGGCAGGGGAAACTGTAAGGATGTAGTTATTGGGACAAGTTTAAATCCTCTTTCTTaGCAGTTGACAGTCAAGCCA | + |
Preference number: 5 (lower is better) Translates to: FSSVLGRGNCKDVVIGTSLNPLS*QLTVKP Trigger: TGGCTTGACTGTCAACTGCAAAGAAAGAGGATTTAA...ACTTGTCCCAATAACTACATCCTTACAGTTTCCCCTGCCTAGGACAGAACTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | ACTCATTTAGGATCAATACAACGATCCCCAGTATACCTCACACATGGCACAGTCCTCAGCAAGTTATTGTaGAGAAATAGCAGCTTCAAG | + |
Preference number: 5 (lower is better) Translates to: THLGSIQRSPVYLTHGTVLSKLL*RNSSFK Trigger: CTTGAAGCTGCTATTTCTCAACAATAACTTGCTGAG...GACTGTGCCATGTGTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | GTCTGCGAAGGCACTTCATTGATTAATGATCTGAGTATGGCCCTTCCTCAAAATGTCCTCAGCAAGTTATaGTTGAGAAATAGCAGCTTC | + |
Preference number: 5 (lower is better) Translates to: VCEGTSLINDLSMALPQNVLSKL*LRNSSF Trigger: GAAGCTGCTATTTCTCAACAATAACTTGCTGAGGAC...ATTTTGAGGAAGGGCCATACTCAGATCATTAATCAATGAAGTGCCTTCGCAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | AAAGACACATTGAAGTTTACTCATTTAGGATCAATACAACGATCCCCAGTATACCTGCAAAGGCATCAGTaGGCAGAGTCCTCAGCAAGT | + |
Preference number: 5 (lower is better) Translates to: KDTLKFTHLGSIQRSPVYLQRHQ*AESSAS Trigger: ACTTGCTGAGGACTCTGCCAACTGATGCCTTTGCAG...GTATACTGGGGATCGTTGTATTGATCCTAAATGAGTAAACTTCAATGTGTCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | CACATTGAAGTTTACTCATTTAGGATCAATACAACGATCCCCAGTATACCTCACTTACTGTGGTTCTCCTaGGGTGTTTCTGCAAACTGC | + |
Preference number: 5 (lower is better) Translates to: HIEVYSFRINTTIPSIPHLLWFS*GVSANC Trigger: GCAGTTTGCAGAAACACCCAAGGAGAACCACAGTAA...GTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGAGTAAACTTCAATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | TCATTTAGGATCAATACAACGATCCCCAGTATACCTCACACATGGCACAGTCAATCCATCCTAGAGCAATaGTGCTTAGAAGAATTATCC | + |
Preference number: 5 (lower is better) Translates to: SFRINTTIPSIPHTWHSQSILEQ*CLEELS Trigger: GGATAATTCTTCTAAGCACAATTGCTCTAGGATGGA...TTGACTGTGCCATGTGTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | TTCAGTTCTGTCCTAGGCAGGGGAAACTGTAAGGATGTAGTTATTGGGACAAGTATTAAATGCTCCAGTTaGAATGTCCTGCAATGCATT | + |
Preference number: 5 (lower is better) Translates to: FSSVLGRGNCKDVVIGTSIKCSS*NVLQCI Trigger: AATGCATTGCAGGACATTCAAACTGGAGCATTTAAT...ACTTGTCCCAATAACTACATCCTTACAGTTTCCCCTGCCTAGGACAGAACTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | GTCTGCGAAGGCACTTCATTGATTAATGATCTGAGTATGGCCCTTCCTCAAAATTTAAATCCTCTTTCTTaGCAGTTGACAGTCAAGCCA | + |
Preference number: 5 (lower is better) Translates to: VCEGTSLINDLSMALPQNLNPLS*QLTVKP Trigger: TGGCTTGACTGTCAACTGCAAAGAAAGAGGATTTAA...ATTTTGAGGAAGGGCCATACTCAGATCATTAATCAATGAAGTGCCTTCGCAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | TGCGAAGGCACTTCATTGATTAATGATCTGAGTATGGCCCTTCCTCAAAATCACTCTATATCATTGCCATaGAGAAAGAGACTCTTCAGG | + |
Preference number: 5 (lower is better) Translates to: CEGTSLINDLSMALPQNHSISLP*RKRLFR Trigger: CCTGAAGAGTCTCTTTCTCAATGGCAATGATATAGA...GTGATTTTGAGGAAGGGCCATACTCAGATCATTAATCAATGAAGTGCCTTCGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | ACTCATTTAGGATCAATACAACGATCCCCAGTATACCTCACACATGGCACAGTCAGCTTTTCTATATCATaGCCATTGAGAAAGAGACTC | + |
Preference number: 5 (lower is better) Translates to: THLGSIQRSPVYLTHGTVSFSIS*PLRKRL Trigger: GAGTCTCTTTCTCAATGGCAATGATATAGAAAAGCT...GACTGTGCCATGTGTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | CACATTGAAGTTTACTCATTTAGGATCAATACAACGATCCCCAGTATACCTCACTCCCAAGGATTCTCGTaGAGATCTATCTGCACAATG | + |
Preference number: 5 (lower is better) Translates to: HIEVYSFRINTTIPSIPHSQGFS*RSICTM Trigger: CATTGTGCAGATAGATCTCAACGAGAATCCTTGGGA...GTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGAGTAAACTTCAATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | CACATTGAAGTTTACTCATTTAGGATCAATACAACGATCCCCAGTATACCTCACACACCTTCTTGTCTCTaGCTTCTAAAGGGCAACTTC | + |
Preference number: 5 (lower is better) Translates to: HIEVYSFRINTTIPSIPHTPSCL*LLKGNF Trigger: GAAGTTGCCCTTTAGAAGCAAGAGACAAGAAGGTGT...GTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGAGTAAACTTCAATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS TCA 90 bp | AGATACAGTCTCTTTAAAATCTTAAGGCCATTAAATGCTCCAGTTTaGATGTCCTGCAATGCATTGTTCCCAAGGTTAATGGACACCGCA | + |
Preference number: 5 (lower is better) Translates to: RYSLFKILRPLNAPV*MSCNALFPRLMDTA Trigger: TGCGGTGTCCATTAACCTTGGGAACAATGCATTGCAGGACATTCAAACTGGAGCATTTAATGGCCTTAAGATTTTAAAGAGACTGTATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | GTCTGCGAAGGCACTTCATTGATTAATGATCTGAGTATGGCCCTTCCTCAAAATTTTGGTGGGTTTTGGTaGCTTATTAGAGGACTTATA | + |
Preference number: 5 (lower is better) Translates to: VCEGTSLINDLSMALPQNFGGFW*LIRGLI Trigger: TATAAGTCCTCTAATAAGCAACCAAAACCCACCAAA...ATTTTGAGGAAGGGCCATACTCAGATCATTAATCAATGAAGTGCCTTCGCAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | TGCGAAGGCACTTCATTGATTAATGATCTGAGTATGGCCCTTCCTCAAAATCACAGGAGTTCAGAGATGTaGTTAAATCCTCTTTCTTTG | + |
Preference number: 5 (lower is better) Translates to: CEGTSLINDLSMALPQNHRSSEM*LNPLSL Trigger: CAAAGAAAGAGGATTTAACAACATCTCTGAACTCCT...GTGATTTTGAGGAAGGGCCATACTCAGATCATTAATCAATGAAGTGCCTTCGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | AAAGACACATTGAAGTTTACTCATTTAGGATCAATACAACGATCCCCAGTATACAAGGTCCACACCTTCTaGTCTCTTGCTTCTAAAGGG | + |
Preference number: 5 (lower is better) Translates to: KDTLKFTHLGSIQRSPVYKVHTF*SLASKG Trigger: CCCTTTAGAAGCAAGAGACAAGAAGGTGTGGACCTT...GTATACTGGGGATCGTTGTATTGATCCTAAATGAGTAAACTTCAATGTGTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | CACATTGAAGTTTACTCATTTAGGATCAATACAACGATCCCCAGTATACCTCACAGTGAAGAAAACTGTTaGTGTATAGTCTTCTCATCG | + |
Preference number: 5 (lower is better) Translates to: HIEVYSFRINTTIPSIPHSEENC*CIVFSS Trigger: CGATGAGAAGACTATACACAAACAGTTTTCTTCACT...GTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGAGTAAACTTCAATGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | CACATTGAAGTTTACTCATTTAGGATCAATACAACGATCCCCAGTATACCTCACAGCTTTTCTATATCATaGCCATTGAGAAAGAGACTC | + |
Preference number: 5 (lower is better) Translates to: HIEVYSFRINTTIPSIPHSFSIS*PLRKRL Trigger: GAGTCTCTTTCTCAATGGCAATGATATAGAAAAGCT...GTGAGGTATACTGGGGATCGTTGTATTGATCCTAAATGAGTAAACTTCAATGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | AAAGACACATTGAAGTTTACTCATTTAGGATCAATACAACGATCCCCAGTATACCTGAAGACATCTAGTTaGTTCTCATGGAGATACAGT | + |
Preference number: 5 (lower is better) Translates to: KDTLKFTHLGSIQRSPVYLKTSS*FSWRYS Trigger: ACTGTATCTCCATGAGAACAAACTAGATGTCTTCAG...GTATACTGGGGATCGTTGTATTGATCCTAAATGAGTAAACTTCAATGTGTCTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS-3UTR CAA 90 bp | AAAGACACATTGAAGTTTACTCATTTAGGATCAATACAACGATCCCCAGTATACTCTATATCATTGCCATaGAGAAAGAGACTCTTCAGG | + |
Preference number: 5 (lower is better) Translates to: KDTLKFTHLGSIQRSPVYSISLP*RKRLFR Trigger: CCTGAAGAGTCTCTTTCTCAATGGCAATGATATAGA...GTATACTGGGGATCGTTGTATTGATCCTAAATGAGTAAACTTCAATGTGTCTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS GCA 72 bp | GAGCAGGCTGTGGCCTCTCACGGTCTAGTAGCAGACTaGCACCACCACAACCTCCCCCAGGGGGAAACAGCA | + |
Preference number: 6 (lower is better) Translates to: EQAVASHGLVAD*HHHNLPQGETA Trigger: TGCTGTTTCCCCCTGGGGGAGGTTGTGGTGGTGGCAGTCTGCTACTAGACCGTGAGAGGCCACAGCCTGCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS CCA 72 bp | ATACTCGTACACGTGACCCACGGGAGGGGCTTTCTCTaGCGAGGACAGAGTTGGTCGCCCTCCACCTCCACT | + |
Preference number: 6 (lower is better) Translates to: ILVHVTHGRGFL*RGQSWSPSTST Trigger: AGTGGAGGTGGAGGGCGACCAACTCTGTCCTCGCCAGAGAAAGCCCCTCCCGTGGGTCACGTGTACGAGTAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS CCA 72 bp | CCCGTTAGGGTGGTAATCTCCAGGCTGGGGTGGAGATaGTCCAGGTTGGGCAATATGCAGCATCTCTGGGCA | + |
Preference number: 6 (lower is better) Translates to: PVRVVISRLGWR*SRLGNMQHLWA Trigger: TGCCCAGAGATGCTGCATATTGCCCAACCTGGACCATCTCCACCCCAGCCTGGAGATTACCACCCTAACGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS GCA 72 bp | GCACTGTGCCATAGAGACAGTCCACAAATCCCACTGTaGACGGAGCAGGCTGTGGCCTCTCACGGTCTAGTA | + |
Preference number: 6 (lower is better) Translates to: ALCHRDSPQIPL*TEQAVASHGLV Trigger: TACTAGACCGTGAGAGGCCACAGCCTGCTCCGTGCACAGTGGGATTTGTGGACTGTCTCTATGGCACAGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS CAA 72 bp | CTCACTTCCCAAGAGCACCTCAGCCATTCCTGTTGGTaGTGTACCAGGACCTCCACGGTCTGTAGCTCCTGT | + |
Preference number: 6 (lower is better) Translates to: LTSQEHLSHSCW*CTRTSTVCSSC Trigger: ACAGGAGCTACAGACCGTGGAGGTCCTGGTACACAACCAACAGGAATGGCTGAGGTGCTCTTGGGAAGTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS TCA 72 bp | GGGGGTCCTACAGAGTACATCACCTACCACGCTGACTaGGCTGATGGTTTCGATCCACTGCTTAAAGGGGAC | + |
Preference number: 6 (lower is better) Translates to: GGPTEYITYHAD*ADGFDPLLKGD Trigger: GTCCCCTTTAAGCAGTGGATCGAAACCATCAGCTCAGTCAGCGTGGTAGGTGATGTACTCTGTAGGACCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS CCA 72 bp | GAACAGAACCAAGAGGCTGAGAATCAACACAGAAAGTaGCACAGGGCCCCCTGGGGGAGAGAACTCATAAGG | + |
Preference number: 6 (lower is better) Translates to: EQNQEAENQHRK*HRAPWGRELIR Trigger: CCTTATGAGTTCTCTCCCCCAGGGGGCCCTGTGCCACTTTCTGTGTTGATTCTCAGCCTCTTGGTTCTGTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS TCA 72 bp | CCACTGGCAGGTAGAGAAAGTAGTTCTTCCTCAAGTTaGGCCGAGCCAGGGATGTACCTGCAAAGGCATCAG | + |
Preference number: 6 (lower is better) Translates to: PLAGRESSSSSS*AEPGMYLQRHQ Trigger: CTGATGCCTTTGCAGGTACATCCCTGGCTCGGCTCAACTTGAGGAAGAACTACTTTCTCTACCTGCCAGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS TCA 72 bp | TTTGGGGGTTTGGTGGTCTGTGAAGCCCTTTCCAGCTaGGAAGAGAAGGGTTTCTTTGAGCCTGGCATCCTG | + |
Preference number: 6 (lower is better) Translates to: FGGLVVCEALSS*EEKGFFEPGIL Trigger: CAGGATGCCAGGCTCAAAGAAACCCTTCTCTTCTCAGCTGGAAAGGGCTTCACAGACCACCAAACCCCCAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS GCA 72 bp | GTTCTTCCTCAAGTTGAGCCGAGCCAGGGATGTACCTaGAAAGGCATCAGTTGGCAGAGTCCTCAGCAAGTT | + |
Preference number: 6 (lower is better) Translates to: VLPQVEPSQGCT*KGISWQSPQQV Trigger: AACTTGCTGAGGACTCTGCCAACTGATGCCTTTGCAGGTACATCCCTGGCTCGGCTCAACTTGAGGAAGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS GCA 72 bp | CCTACCACGCTGACTGAGCTGATGGTTTCGATCCACTaGTTAAAGGGGACTAAGTCGCAAGTGCAGTCCCAA | + |
Preference number: 6 (lower is better) Translates to: PTTLTELMVSIH*LKGTKSQVQSQ Trigger: TTGGGACTGCACTTGCGACTTAGTCCCCTTTAAGCAGTGGATCGAAACCATCAGCTCAGTCAGCGTGGTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS CAA 90 bp | CAGCCGGTGACATTGCATCTGGATTCCTGTAAGGTCCACACCTTCTaGTCTCTTGCTTCTAAAGGGCAACTTCTTCCTACGCCGACGGAG | + |
Preference number: 6 (lower is better) Translates to: QPVTLHLDSCKVHTF*SLASKGQLLPTPTE Trigger: CTCCGTCGGCGTAGGAAGAAGTTGCCCTTTAGAAGCAAGAGACAAGAAGGTGTGGACCTTACAGGAATCCAGATGCAATGTCACCGGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS CAA 90 bp | ACTCCCACCACTGTTGCCTCCACTGTCCTCAAACAGCCGGTGACATaGCATCTGGATTCCTGTAAGGTCCACACCTTCTTGTCTCTTGCT | + |
Preference number: 6 (lower is better) Translates to: TPTTVASTVLKQPVT*HLDSCKVHTFLSLA Trigger: AGCAAGAGACAAGAAGGTGTGGACCTTACAGGAATCCAGATGCAATGTCACCGGCTGTTTGAGGACAGTGGAGGCAACAGTGGTGGGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS CAA 90 bp | GGCAGAGTCCTCAGCAAGTTATTGTTGAGAAATAGCAGCTTCAAGTaGGGCATGAGGCTGAAGGCTGCAGGTTGGATTTCCCGGATGACG | + |
Preference number: 6 (lower is better) Translates to: GRVLSKLLLRNSSFK*GMRLKAAGWISRMT Trigger: CGTCATCCGGGAAATCCAACCTGCAGCCTTCAGCCTCATGCCCAACTTGAAGCTGCTATTTCTCAACAATAACTTGCTGAGGACTCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS CAA 90 bp | GTGAGGGTGAGGGTGGTGATGGTTCACCGTCACTATGGTGTTAAGTaGAGAGTTGGAAACAGCCAGAGCCCACTCCTTCTCTTTTTCCAG | + |
Preference number: 6 (lower is better) Translates to: VRVRVVMVHRHYGVK*RVGNSQSPLLLFFQ Trigger: CTGGAAAAAGAGAAGGAGTGGGCTCTGGCTGTTTCCAACTCTCAACTTAACACCATAGTGACGGTGAACCATCACCACCCTCACCCTCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS GCA 72 bp | GGTCCTGTAGTTACTGTGGTTCTCCTTGGGTGTTTCTaGAAACTGCTCACTTCCCAAGAGCACCTCAGCCAT | + |
Preference number: 6 (lower is better) Translates to: GPVVTVVLLGCF*KLLTSQEHLSH Trigger: ATGGCTGAGGTGCTCTTGGGAAGTGAGCAGTTTGCAGAAACACCCAAGGAGAACCACAGTAACTACAGGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS CCA 72 bp | CATAAAACTTCCAGCTCAATAGTGCGCACATCACGGTaGGTGAGGTTCTCGGGGGTCCTACAGAGTACATCA | + |
Preference number: 6 (lower is better) Translates to: HKTSSSIVRTSR*VRFSGVLQSTS Trigger: TGATGTACTCTGTAGGACCCCCGAGAACCTCACCCACCGTGATGTGCGCACTATTGAGCTGGAAGTTTTATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS CCA 72 bp | AGGCAGCCACTTCTTCCTCCTCTCGAGGCTTATAGATaGGGTTGTTACACATCTGAGTTACTGGGTGGGGTA | + |
Preference number: 6 (lower is better) Translates to: RQPLLPPLEAYR*GCYTSELLGGV Trigger: TACCCCACCCAGTAACTCAGATGTGTAACAACCCCATCTATAAGCCTCGAGAGGAGGAAGAAGTGGCTGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS CAA 72 bp | AGGGTGGTGATGGTTCACCGTCACTATGGTGTTAAGTaGAGAGTTGGAAACAGCCAGAGCCCACTCCTTCTC | + |
Preference number: 6 (lower is better) Translates to: RVVMVHRHYGVK*RVGNSQSPLLL Trigger: GAGAAGGAGTGGGCTCTGGCTGTTTCCAACTCTCAACTTAACACCATAGTGACGGTGAACCATCACCACCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS CAA 90 bp | ACAGAAGACAACATAGAGGAAGGTTTAGTTGGCCAGGCATTCTCCTaGCTTGAAGATAAGTGGGGAATCCCCAGACTGGCCTCCACCTCA | + |
Preference number: 6 (lower is better) Translates to: TEDNIEEGLVGQAFS*LEDKWGIPRLASTS Trigger: TGAGGTGGAGGCCAGTCTGGGGATTCCCCACTTATCTTCAAGCAAGGAGAATGCCTGGCCAACTAAACCTTCCTCTATGTTGTCTTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS GCA 72 bp | AAGGATTCTCTTCTAGCTGGAGCTCCATCAGGCTTCTaGCAATGTGATCCAGCATCCCACGGTAGAAGAGAA | + |
Preference number: 6 (lower is better) Translates to: KDSLLAGAPSGF*QCDPASHGRRE Trigger: TTCTCTTCTACCGTGGGATGCTGGATCACATTGGCAGAAGCCTGATGGAGCTCCAGCTAGAAGAGAATCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS GCA 72 bp | CAAGTGCAGTCCCAAGGATTCTCGTTGAGATCTATCTaGACAATGGCATTCAGGTGTTCAAGGACACCAGCC | + |
Preference number: 6 (lower is better) Translates to: QVQSQGFSLRSI*TMAFRCSRTPA Trigger: GGCTGGTGTCCTTGAACACCTGAATGCCATTGTGCAGATAGATCTCAACGAGAATCCTTGGGACTGCACTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS CAA 72 bp | AACATAGAGGAAGGTTTAGTTGGCCAGGCATTCTCCTaGCTTGAAGATAAGTGGGGAATCCCCAGACTGGCC | + |
Preference number: 6 (lower is better) Translates to: NIEEGLVGQAFS*LEDKWGIPRLA Trigger: GGCCAGTCTGGGGATTCCCCACTTATCTTCAAGCAAGGAGAATGCCTGGCCAACTAAACCTTCCTCTATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS CAA 72 bp | CAGCTTCAAGTTGGGCATGAGGCTGAAGGCTGCAGGTaGGATTTCCCGGATGACGTTGAATTCGAAGTACAA | + |
Preference number: 6 (lower is better) Translates to: QLQVGHEAEGCR*DFPDDVEFEVQ Trigger: TTGTACTTCGAATTCAACGTCATCCGGGAAATCCAACCTGCAGCCTTCAGCCTCATGCCCAACTTGAAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS CCA 72 bp | GTCTTCTTGATTTCACGGAGATCCTTCCCATGGAAATaGAAAGGTGTCTCACAGGTAATGTCTCCCACCAGG | + |
Preference number: 6 (lower is better) Translates to: VFLISRRSFPWK*KGVSQVMSPTR Trigger: CCTGGTGGGAGACATTACCTGTGAGACACCTTTCCATTTCCATGGGAAGGATCTCCGTGAAATCAAGAAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS CCA 72 bp | CACAATGGCATTCAGGTGTTCAAGGACACCAGCCACTaGCAGGTAGAGAAAGTAGTTCTTCCTCAAGTTGAG | + |
Preference number: 6 (lower is better) Translates to: HNGIQVFKDTSH*QVEKVVLPQVE Trigger: CTCAACTTGAGGAAGAACTACTTTCTCTACCTGCCAGTGGCTGGTGTCCTTGAACACCTGAATGCCATTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS CAA 90 bp | GATGTACCTGCAAAGGCATCAGTTGGCAGAGTCCTCAGCAAGTTATaGTTGAGAAATAGCAGCTTCAAGTTGGGCATGAGGCTGAAGGCT | + |
Preference number: 6 (lower is better) Translates to: DVPAKASVGRVLSKL*LRNSSFKLGMRLKA Trigger: AGCCTTCAGCCTCATGCCCAACTTGAAGCTGCTATTTCTCAACAATAACTTGCTGAGGACTCTGCCAACTGATGCCTTTGCAGGTACATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS CAA 90 bp | AGACCTCGGAACATACCTGGAGTCAGCTTTTCTATATCATTGCCATaGAGAAAGAGACTCTTCAGGTTGGGCAGGTTGATGAAAGCCCCA | + |
Preference number: 6 (lower is better) Translates to: RPRNIPGVSFSISLP*RKRLFRLGRLMKAP Trigger: TGGGGCTTTCATCAACCTGCCCAACCTGAAGAGTCTCTTTCTCAATGGCAATGATATAGAAAAGCTGACTCCAGGTATGTTCCGAGGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS TCA 72 bp | GGACTAAGTCGCAAGTGCAGTCCCAAGGATTCTCGTTaGGATCTATCTGCACAATGGCATTCAGGTGTTCAA | + |
Preference number: 6 (lower is better) Translates to: GLSRKCSPKDSR*DLSAQWHSGVQ Trigger: TTGAACACCTGAATGCCATTGTGCAGATAGATCTCAACGAGAATCCTTGGGACTGCACTTGCGACTTAGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS CCA 72 bp | GCATGTACACCCAGTAGGACATATAATGGGAATGGGTaGTCTAGTCTGATAGGGGGCAATAGGAGGTTGATT | + |
Preference number: 6 (lower is better) Translates to: ACTPSRTYNGNG*SSLIGGNRRLI Trigger: AATCAACCTCCTATTGCCCCCTATCAGACTAGACCACCCATTCCCATTATATGTCCTACTGGGTGTACATGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS CAA 72 bp | TGGGATGTCGAAGGTGGTCTCGGTGTTCTGGGCTGTTaGGTGGGTTTTGGTTGCTTATTAGAGGACTTATAT | + |
Preference number: 6 (lower is better) Translates to: WDVEGGLGVLGC*VGFGCLLEDLY Trigger: ATATAAGTCCTCTAATAAGCAACCAAAACCCACCAAACAGCCCAGAACACCGAGACCACCTTCGACATCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS CAA 72 bp | CCTCGGAACATACCTGGAGTCAGCTTTTCTATATCATaGCCATTGAGAAAGAGACTCTTCAGGTTGGGCAGG | + |
Preference number: 6 (lower is better) Translates to: PRNIPGVSFSIS*PLRKRLFRLGR Trigger: CCTGCCCAACCTGAAGAGTCTCTTTCTCAATGGCAATGATATAGAAAAGCTGACTCCAGGTATGTTCCGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS CAA 90 bp | CTCTGCAGACCTCGGAACATACCTGGAGTCAGCTTTTCTATATCATaGCCATTGAGAAAGAGACTCTTCAGGTTGGGCAGGTTGATGAAA | + |
Preference number: 6 (lower is better) Translates to: LCRPRNIPGVSFSIS*PLRKRLFRLGRLMK Trigger: TTTCATCAACCTGCCCAACCTGAAGAGTCTCTTTCTCAATGGCAATGATATAGAAAAGCTGACTCCAGGTATGTTCCGAGGTCTGCAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS TCA 72 bp | CAGAGTCAGACAACAGTGGACAGAGTTCAGTCTTCTTaGTTTCACGGAGATCCTTCCCATGGAAATGGAAAG | + |
Preference number: 6 (lower is better) Translates to: QSQTTVDRVQSS*FHGDPSHGNGK Trigger: CTTTCCATTTCCATGGGAAGGATCTCCGTGAAATCAAGAAGACTGAACTCTGTCCACTGTTGTCTGACTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS CAA 90 bp | TATAAAGCCTGGGATGTCGAAGGTGGTCTCGGTGTTCTGGGCTGTTaGGTGGGTTTTGGTTGCTTATTAGAGGACTTATATTCAACAGAT | + |
Preference number: 6 (lower is better) Translates to: YKAWDVEGGLGVLGC*VGFGCLLEDLYSTD Trigger: ATCTGTTGAATATAAGTCCTCTAATAAGCAACCAAAACCCACCAAACAGCCCAGAACACCGAGACCACCTTCGACATCCCAGGCTTTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS CAA 72 bp | AACATACCTGGAGTCAGCTTTTCTATATCATTGCCATaGAGAAAGAGACTCTTCAGGTTGGGCAGGTTGATG | + |
Preference number: 6 (lower is better) Translates to: NIPGVSFSISLP*RKRLFRLGRLM Trigger: CATCAACCTGCCCAACCTGAAGAGTCTCTTTCTCAATGGCAATGATATAGAAAAGCTGACTCCAGGTATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS CAA 90 bp | TTCCCACGAAGGTCCAGATGCGTTAAGGAAACAGCTTTAAATAAATaGGTTGGAAGCACGGGGATGAGATTATCATTTAAGATTAGAACC | + |
Preference number: 6 (lower is better) Translates to: FPRRSRCVKETALNK*VGSTGMRLSFKIRT Trigger: GGTTCTAATCTTAAATGATAATCTCATCCCCGTGCTTCCAACCAATTTATTTAAAGCTGTTTCCTTAACGCATCTGGACCTTCGTGGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS GCA 72 bp | AAGAGAACCTTTAACCTGTTCCCACGAAGGTCCAGATaGGTTAAGGAAACAGCTTTAAATAAATTGGTTGGA | + |
Preference number: 6 (lower is better) Translates to: KRTFNLFPRRSR*VKETALNKLVG Trigger: TCCAACCAATTTATTTAAAGCTGTTTCCTTAACGCATCTGGACCTTCGTGGGAACAGGTTAAAGGTTCTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS TCA 72 bp | GAAGAAAAATTCCAAAAATCAGAGCGGTATATCTTCTaGATAAGATTGCTGCTCAGGTACAGCTTCTTGGCA | + |
Preference number: 6 (lower is better) Translates to: EEKFQKSERYIF*IRLLLRYSFLA Trigger: TGCCAAGAAGCTGTACCTGAGCAGCAATCTTATTCAGAAGATATACCGCTCTGATTTTTGGAATTTTTCTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS TCA 72 bp | CTCTTTAAAATCTTAAGGCCATTAAATGCTCCAGTTTaGATGTCCTGCAATGCATTGTTCCCAAGGTTAATG | + |
Preference number: 6 (lower is better) Translates to: LFKILRPLNAPV*MSCNALFPRLM Trigger: CATTAACCTTGGGAACAATGCATTGCAGGACATTCAAACTGGAGCATTTAATGGCCTTAAGATTTTAAAGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS TCA 72 bp | AAACTGTTTGTGTATAGTCTTCTCATCGAATTCCTCTaGAGATACAGTTTAAAAGGTCTTGACCAGAACTCA | + |
Preference number: 6 (lower is better) Translates to: KLFVYSLLIEFL*RYSLKGLDQNS Trigger: TGAGTTCTGGTCAAGACCTTTTAAACTGTATCTTCAGAGGAATTCGATGAGAAGACTATACACAAACAGTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |
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CDS CAA 72 bp | AAGCCAAGGAAGGTGTCATTTCTGAAGACATCTAGTTaGTTCTCATGGAGATACAGTCTCTTTAAAATCTTA | + |
Preference number: 6 (lower is better) Translates to: KPRKVSFLKTSS*FSWRYSLFKIL Trigger: TAAGATTTTAAAGAGACTGTATCTCCATGAGAACAAACTAGATGTCTTCAGAAATGACACCTTCCTTGGCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059407.9 ENSMUST00000192477.2 |