Pregenerated sensors for SLITRK2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036790Ensembl transcript IDs: ENSMUST00000036043.5, ENSMUST00000166241.2
Found 182 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCATTAGCACTGGGGAAGGGAGGACACAACAAAAGCAAAGGCAGTaGTTCCAACAGTCTGGAGCTGCATCCTTTGATGCTAGAGGGTTG | + |
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Preference number: 1 (lower is better) Translates to: PISTGEGRTQQKQRQ*FQQSGAASFDARGL Trigger: CAACCCTCTAGCATCAAAGGATGCAGCTCCAGACTGTTGGAAGCACTGCCTTTGCTTTTGTTGTGTCCTCCCTTCCCCAGTGCTAATGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
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| 3UTR TCA 90 bp | GGGAGGGGAGATGCTGTTGAGCAAGAGTCCTGTGTTCAATTGTATTaGAATGGGCTTGCTAGTCCAGACGTTCAGGAATGCTATTGTGCT | + |
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Preference number: 1 (lower is better) Translates to: GRGDAVEQESCVQLY*NGLASPDVQECYCA Trigger: AGCACAATAGCATTCCTGAACGTCTGGACTAGCAAGCCCATTTCAATACAATTGAACACAGGACTCTTGCTCAACAGCATCTCCCCTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
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| 3UTR TCA 90 bp | ACAGTGTGCTTCTTTCAGACGCCATCACTTGCTTTAATAAGGAATTaGAAAGCTGGACTACTTTATATGCTGATCACCATCCCAGTTGCA | + |
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Preference number: 1 (lower is better) Translates to: TVCFFQTPSLALIRN*KAGLLYMLITIPVA Trigger: TGCAACTGGGATGGTGATCAGCATATAAAGTAGTCCAGCTTTTCAATTCCTTATTAAAGCAAGTGATGGCGTCTGAAAGAAGCACACTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
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| 3UTR TCA 90 bp | CTTTTTCTTACTCACCAAATGCCTGAGGAAAGAAGGCACGAAGGTTaGCCTAAGTTCATACCAAATATTCTTGGCAATGGTGTGAAGTTT | + |
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Preference number: 1 (lower is better) Translates to: LFLTHQMPEERRHEG*PKFIPNILGNGVKF Trigger: AAACTTCACACCATTGCCAAGAATATTTGGTATGAACTTAGGTCAACCTTCGTGCCTTCTTTCCTCAGGCATTTGGTGAGTAAGAAAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
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| 3UTR CCA 90 bp | CTTCTTTCAGACGCCATCACTTGCTTTAATAAGGAATTGAAAAGCTaGACTACTTTATATGCTGATCACCATCCCAGTTGCATAAGGATT | + |
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Preference number: 1 (lower is better) Translates to: LLSDAITCFNKELKS*TTLYADHHPSCIRI Trigger: AATCCTTATGCAACTGGGATGGTGATCAGCATATAAAGTAGTCCAGCTTTTCAATTCCTTATTAAAGCAAGTGATGGCGTCTGAAAGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
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| 3UTR TCA 90 bp | TCTCCACATGATAATAAAGGATTATTATGTGCAGTAACCTATTTATaGAAAGGAAACAGTGTGCTTCTTTCAGACGCCATCACTTGCTTT | + |
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Preference number: 1 (lower is better) Translates to: SPHDNKGLLCAVTYL*KGNSVLLSDAITCF Trigger: AAAGCAAGTGATGGCGTCTGAAAGAAGCACACTGTTTCCTTTTCATAAATAGGTTACTGCACATAATAATCCTTTATTATCATGTGGAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
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| 3UTR TCA 90 bp | CAGAATGTCCGACTCATTCACTACTCTGGCTTCTTTTATACAAAATaGAAATTTCTATACATATGTGTAGATCACTCTGACCCACCATTT | + |
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Preference number: 1 (lower is better) Translates to: QNVRLIHYSGFFYTK*KFLYICVDHSDPPF Trigger: AAATGGTGGGTCAGAGTGATCTACACATATGTATAGAAATTTTCATTTTGTATAAAAGAAGCCAGAGTAGTGAATGAGTCGGACATTCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
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| 3UTR TCA 90 bp | AAAACTGCAGCAGACTTTAAGTATAAGCCCTTAGCAACCAAGAAATaGATAGTACAAGCAATGCTGACAAAACACACTCTTATTATGCAT | + |
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Preference number: 1 (lower is better) Translates to: KTAADFKYKPLATKK*IVQAMLTKHTLIMH Trigger: ATGCATAATAAGAGTGTGTTTTGTCAGCATTGCTTGTACTATTCATTTCTTGGTTGCTAAGGGCTTATACTTAAAGTCTGCTGCAGTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
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| 3UTR-3UTR TCA 90 bp | TGTTCCAGGTGGGGTCCTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTAAGAATTTGTGGGTTTaGGTTCTTCCAGGAGGCCTC | + |
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Preference number: 2 (lower is better) Translates to: CSRWGPRNATILPGPVLAKNLWV*VLPGGL Trigger: GAGGCCTCCTGGAAGAACTCAAACCCACAAATTCTT...AGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAGGACCCCACCTGGAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
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| 3UTR-3UTR GCA 90 bp | TGTTCCAGGTGGGGTCCTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTCGAGAGCAAGATCATTaGTTCACCCCATCTCCCAAA | + |
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Preference number: 2 (lower is better) Translates to: CSRWGPRNATILPGPVLAREQDH*FTPSPK Trigger: TTTGGGAGATGGGGTGAAGCAATGATCTTGCTCTCG...AGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAGGACCCCACCTGGAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
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| 3UTR CAA 90 bp | CCAGGTGGGGTCCTAGGAATGCCACTATCTTGCCTGGACCAGTACTaGCTAGGCTCACACTCATTACGATCTGCTTGTGAAATAGTAAGG | + |
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Preference number: 2 (lower is better) Translates to: PGGVLGMPLSCLDQY*LGSHSLRSACEIVR Trigger: CCTTACTATTTCACAAGCAGATCGTAATGAGTGTGAGCCTAGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAGGACCCCACCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
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| 3UTR-3UTR TCA 90 bp | TGTTCCAGGTGGGGTCCTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTAATGTCACCCAAAGATaGAGCACTTTCCAGAATGTC | + |
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Preference number: 2 (lower is better) Translates to: CSRWGPRNATILPGPVLANVTQR*STFQNV Trigger: GACATTCTGGAAAGTGCTTCATCTTTGGGTGACATT...AGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAGGACCCCACCTGGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
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| 3UTR-3UTR GCA 90 bp | TGTTCCAGGTGGGGTCCTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTGAAAAGGAAACAGTGTaGTTCTTTCAGACGCCATCA | + |
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Preference number: 2 (lower is better) Translates to: CSRWGPRNATILPGPVLAEKETV*FFQTPS Trigger: TGATGGCGTCTGAAAGAAGCACACTGTTTCCTTTTC...AGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAGGACCCCACCTGGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
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| 3UTR-3UTR CCA 90 bp | TGTTCCAGGTGGGGTCCTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTTTATTAATCCAGAGGTaGCTTATGCCCTCTAGTCCA | + |
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Preference number: 2 (lower is better) Translates to: CSRWGPRNATILPGPVLALLIQR*LMPSSP Trigger: TGGACTAGAGGGCATAAGCCACCTCTGGATTAATAA...AGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAGGACCCCACCTGGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGATTCTTGTCCCCACTGCCTACCTGGGAGTGATTTTCATTCAGGTAAAGCTTGTCTTATATATCTGTaGCCCCTCTGCACACAGCAG | + |
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Preference number: 2 (lower is better) Translates to: LDSCPHCLPGSDFHSGKACLIYL*PLCTQQ Trigger: CTGCTGTGTGCAGAGGGGCCACAGATATATAAGACA...AGCTTTACCTGAATGAAAATCACTCCCAGGTAGGCAGTGGGGACAAGAATCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGATTCTTGTCCCCACTGCCTACCTGGGAGTGATTTTCATTCAGGTAAAGCTAGAGTAATTGCTGTTTaGCATTTTGTAGGGCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: LDSCPHCLPGSDFHSGKARVIAV*HFVGPG Trigger: GCCTGGCCCTACAAAATGTCAAACAGCAATTACTCT...AGCTTTACCTGAATGAAAATCACTCCCAGGTAGGCAGTGGGGACAAGAATCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
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| 3UTR-3UTR GCA 90 bp | CTGGATTCTTGTCCCCACTGCCTACCTGGGAGTGATTTTCATTCAGGTAAAGCTTTCTTACTCACCAAATaGCTGAGGAAAGAAGGCACG | + |
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Preference number: 2 (lower is better) Translates to: LDSCPHCLPGSDFHSGKAFLLTK*LRKEGT Trigger: CGTGCCTTCTTTCCTCAGGCATTTGGTGAGTAAGAA...AGCTTTACCTGAATGAAAATCACTCCCAGGTAGGCAGTGGGGACAAGAATCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGATTCTTGTCCCCACTGCCTACCTGGGAGTGATTTTCATTCAGGTAAAGCTCCTATACTCGGTAACTaGAGATGGCAATACCATAGA | + |
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Preference number: 2 (lower is better) Translates to: LDSCPHCLPGSDFHSGKAPILGN*RWQYHR Trigger: TCTATGGTATTGCCATCTTCAGTTACCGAGTATAGG...AGCTTTACCTGAATGAAAATCACTCCCAGGTAGGCAGTGGGGACAAGAATCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGATTCTTGTCCCCACTGCCTACCTGGGAGTGATTTTCATTCAGGTAAAGCTGACTACTTTATATGCTaGTCACCATCCCAGTTGCAT | + |
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Preference number: 2 (lower is better) Translates to: LDSCPHCLPGSDFHSGKADYFIC*SPSQLH Trigger: ATGCAACTGGGATGGTGATCAGCATATAAAGTAGTC...AGCTTTACCTGAATGAAAATCACTCCCAGGTAGGCAGTGGGGACAAGAATCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
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| 3UTR-3UTR TCA 90 bp | CTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTAGGCTCACACTCATTAATGTGTAGATCACTCTaGCCCACCATTTTCAGTTGT | + |
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Preference number: 2 (lower is better) Translates to: LGMPLSCLDQYLLGSHSLMCRSL*PTIFSC Trigger: ACAACTGAAAATGGTGGGTCAGAGTGATCTACACAT...TAATGAGTGTGAGCCTAGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
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| 3UTR CAA 90 bp | GCCTACCTGGGAGTGATTTTCATTCAGGTAAAGCTCTCTTCTATTTaGTACTATGCTCCTTACCAAATTTGGGAGGTCTGTGAAGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: AYLGVIFIQVKLSSI*YYAPYQIWEVCEGR Trigger: CCTCCCTTCACAGACCTCCCAAATTTGGTAAGGAGCATAGTACAAAATAGAAGAGAGCTTTACCTGAATGAAAATCACTCCCAGGTAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
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| 3UTR-3UTR TCA 90 bp | CTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTAGGCTCACACTCATTAAACATTCATGTTCTCTaGCGGTTTCTAAGAAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: LGMPLSCLDQYLLGSHSLNIHVL*RFLRRE Trigger: CTCTCTTCTTAGAAACCGTCAGAGAACATGAATGTT...TAATGAGTGTGAGCCTAGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
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| 3UTR-3UTR TCA 90 bp | CTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTAGGCTCACACTCATTAAGCTTTGGTAGTGCTTaGGCCTATAAAGAAAATCAG | + |
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Preference number: 2 (lower is better) Translates to: LGMPLSCLDQYLLGSHSLSFGSA*AYKENQ Trigger: CTGATTTTCTTTATAGGCTCAAGCACTACCAAAGCT...TAATGAGTGTGAGCCTAGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGATTCTTGTCCCCACTGCCTACCTGGGAGTGATTTTCATTCAGGTAAAGCTTGTGGCGGCCTCTACTaGTATGTGTTTATAGAAAAT | + |
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Preference number: 2 (lower is better) Translates to: LDSCPHCLPGSDFHSGKACGGLY*YVFIEN Trigger: ATTTTCTATAAACACATACCAGTAGAGGCCGCCACA...AGCTTTACCTGAATGAAAATCACTCCCAGGTAGGCAGTGGGGACAAGAATCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGATTCTTGTCCCCACTGCCTACCTGGGAGTGATTTTCATTCAGGTAAAGCTGCAGTAACCTATTTATaGAAAGGAAACAGTGTGCTT | + |
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Preference number: 2 (lower is better) Translates to: LDSCPHCLPGSDFHSGKAAVTYL*KGNSVL Trigger: AAGCACACTGTTTCCTTTTCATAAATAGGTTACTGC...AGCTTTACCTGAATGAAAATCACTCCCAGGTAGGCAGTGGGGACAAGAATCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGATTCTTGTCCCCACTGCCTACCTGGGAGTGATTTTCATTCAGGTAAAGCTCACCATTTTCAGTTGTaGGCTAATGGATATAAATGG | + |
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Preference number: 2 (lower is better) Translates to: LDSCPHCLPGSDFHSGKAHHFQL*ANGYKW Trigger: CCATTTATATCCATTAGCTCACAACTGAAAATGGTG...AGCTTTACCTGAATGAAAATCACTCCCAGGTAGGCAGTGGGGACAAGAATCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
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| 3UTR-3UTR GCA 90 bp | CTGGATTCTTGTCCCCACTGCCTACCTGGGAGTGATTTTCATTCAGGTAAAGCTTCAGACGCCATCACTTaGTTTAATAAGGAATTGAAA | + |
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Preference number: 2 (lower is better) Translates to: LDSCPHCLPGSDFHSGKASDAIT*FNKELK Trigger: TTTCAATTCCTTATTAAAGCAAGTGATGGCGTCTGA...AGCTTTACCTGAATGAAAATCACTCCCAGGTAGGCAGTGGGGACAAGAATCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
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| 3UTR CAA 90 bp | AACAGTGTGCTTCTTTCAGACGCCATCACTTGCTTTAATAAGGAATaGAAAAGCTGGACTACTTTATATGCTGATCACCATCCCAGTTGC | + |
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Preference number: 2 (lower is better) Translates to: NSVLLSDAITCFNKE*KSWTTLYADHHPSC Trigger: GCAACTGGGATGGTGATCAGCATATAAAGTAGTCCAGCTTTTCAATTCCTTATTAAAGCAAGTGATGGCGTCTGAAAGAAGCACACTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
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| 3UTR GCA 72 bp | ACTGGGGAAGGGAGGACACAACAAAAGCAAAGGCAGTaGTTCCAACAGTCTGGAGCTGCATCCTTTGATGCT | + |
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Preference number: 3 (lower is better) Translates to: TGEGRTQQKQRQ*FQQSGAASFDA Trigger: AGCATCAAAGGATGCAGCTCCAGACTGTTGGAAGCACTGCCTTTGCTTTTGTTGTGTCCTCCCTTCCCCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
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| 3UTR GCA 72 bp | TCTGTTCCAGGTGGGGTCCTAGGAATGCCACTATCTTaGCTGGACCAGTACTTGCTAGGCTCACACTCATTA | + |
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Preference number: 3 (lower is better) Translates to: SVPGGVLGMPLS*LDQYLLGSHSL Trigger: TAATGAGTGTGAGCCTAGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAGGACCCCACCTGGAACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
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| 3UTR-3UTR CAA 90 bp | TGTTCCAGGTGGGGTCCTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTTCTGCTGTCTTGAATTaGCAGAGAACTTACGTGGGA | + |
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Preference number: 3 (lower is better) Translates to: CSRWGPRNATILPGPVLASAVLN*QRTYVG Trigger: TCCCACGTAAGTTCTCTGCAAATTCAAGACAGCAGA...AGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAGGACCCCACCTGGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
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| 3UTR TCA 72 bp | TTTGTACTATGCTCCTTACCAAATTTGGGAGGTCTGTaGAGGGAGGGGGATTTAGTATCAGTGGGAGTAGGG | + |
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Preference number: 3 (lower is better) Translates to: FVLCSLPNLGGL*REGDLVSVGVG Trigger: CCCTACTCCCACTGATACTAAATCCCCCTCCCTTCACAGACCTCCCAAATTTGGTAAGGAGCATAGTACAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
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| 3UTR TCA 72 bp | GATGCTGTTGAGCAAGAGTCCTGTGTTCAATTGTATTaGAATGGGCTTGCTAGTCCAGACGTTCAGGAATGC | + |
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Preference number: 3 (lower is better) Translates to: DAVEQESCVQLY*NGLASPDVQEC Trigger: GCATTCCTGAACGTCTGGACTAGCAAGCCCATTTCAATACAATTGAACACAGGACTCTTGCTCAACAGCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
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| 3UTR-3UTR CAA 90 bp | CTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTAGGCTCACACTCATTAAATTTAAAGGAAAGCTaGCGAGAGCAAGATCATTGC | + |
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Preference number: 3 (lower is better) Translates to: LGMPLSCLDQYLLGSHSLNLKES*REQDHC Trigger: GCAATGATCTTGCTCTCGCAAGCTTTCCTTTAAATT...TAATGAGTGTGAGCCTAGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
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| 3UTR-3UTR CAA 90 bp | CTGGATTCTTGTCCCCACTGCCTACCTGGGAGTGATTTTCATTCAGGTAAAGCTAACAAAACGAAAGGCTaGCTGAAGCTAAGAAGAAAA | + |
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Preference number: 3 (lower is better) Translates to: LDSCPHCLPGSDFHSGKANKTKG*LKLRRK Trigger: TTTTCTTCTTAGCTTCAGCAAGCCTTTCGTTTTGTT...AGCTTTACCTGAATGAAAATCACTCCCAGGTAGGCAGTGGGGACAAGAATCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
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| 3UTR-3UTR CAA 90 bp | CTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTAGGCTCACACTCATTAATGATATATGCTGATTaGCCTTCACAATTACTTCCC | + |
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Preference number: 3 (lower is better) Translates to: LGMPLSCLDQYLLGSHSLMIYAD*PSQLLP Trigger: GGGAAGTAATTGTGAAGGCAAATCAGCATATATCAT...TAATGAGTGTGAGCCTAGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
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| 3UTR TCA 72 bp | GTACTTGCTAGGCTCACACTCATTACGATCTGCTTGTaGAATAGTAAGGGAAGGAATAACATATCCAGCTGG | + |
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Preference number: 3 (lower is better) Translates to: VLARLTLITICL*NSKGRNNISSW Trigger: CCAGCTGGATATGTTATTCCTTCCCTTACTATTTCACAAGCAGATCGTAATGAGTGTGAGCCTAGCAAGTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
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| 3UTR TCA 72 bp | CACAAAGTAGCGATGCCCAGGCCTATACTCGGTAACTaGAGATGGCAATACCATAGACCATTATTTACAAAA | + |
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Preference number: 3 (lower is better) Translates to: HKVAMPRPILGN*RWQYHRPLFTK Trigger: TTTTGTAAATAATGGTCTATGGTATTGCCATCTTCAGTTACCGAGTATAGGCCTGGGCATCGCTACTTTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
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| 3UTR CCA 72 bp | GACGCCATCACTTGCTTTAATAAGGAATTGAAAAGCTaGACTACTTTATATGCTGATCACCATCCCAGTTGC | + |
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Preference number: 3 (lower is better) Translates to: DAITCFNKELKS*TTLYADHHPSC Trigger: GCAACTGGGATGGTGATCAGCATATAAAGTAGTCCAGCTTTTCAATTCCTTATTAAAGCAAGTGATGGCGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
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| 3UTR TCA 72 bp | GCAGACTTTAAGTATAAGCCCTTAGCAACCAAGAAATaGATAGTACAAGCAATGCTGACAAAACACACTCTT | + |
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Preference number: 3 (lower is better) Translates to: ADFKYKPLATKK*IVQAMLTKHTL Trigger: AAGAGTGTGTTTTGTCAGCATTGCTTGTACTATTCATTTCTTGGTTGCTAAGGGCTTATACTTAAAGTCTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
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| 3UTR GCA 72 bp | AAAGGAAACAGTGTGCTTCTTTCAGACGCCATCACTTaGTTTAATAAGGAATTGAAAAGCTGGACTACTTTA | + |
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Preference number: 3 (lower is better) Translates to: KGNSVLLSDAIT*FNKELKSWTTL Trigger: TAAAGTAGTCCAGCTTTTCAATTCCTTATTAAAGCAAGTGATGGCGTCTGAAAGAAGCACACTGTTTCCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
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| 3UTR TCA 72 bp | AAACTCTTGTATTTATATATAAATGTCACCCAAAGATaGAGCACTTTCCAGAATGTCCGACTCATTCACTAC | + |
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Preference number: 3 (lower is better) Translates to: KLLYLYINVTQR*STFQNVRLIHY Trigger: GTAGTGAATGAGTCGGACATTCTGGAAAGTGCTTCATCTTTGGGTGACATTTATATATAAATACAAGAGTTT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
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| CDS-3UTR TCA 90 bp | TGTTCCAGGTGGGGTCCTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTGGGTTTTGGCACATCTaGCCCACAGGTGGAGGAATG | + |
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Preference number: 4 (lower is better) Translates to: CSRWGPRNATILPGPVLAGFWHI*PTGGGM Trigger: CATTCCTCCACCTGTGGGTCAGATGTGCCAAAACCC...AGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAGGACCCCACCTGGAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
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| CDS-3UTR TCA 90 bp | TGTTCCAGGTGGGGTCCTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTTGTCCAGCCATGCCTTaGGAGGAAGTAAGTCACAGG | + |
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Preference number: 4 (lower is better) Translates to: CSRWGPRNATILPGPVLACPAMP*EEVSHR Trigger: CCTGTGACTTACTTCCTCTCAAGGCATGGCTGGACA...AGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAGGACCCCACCTGGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
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| CDS-3UTR TCA 90 bp | TGTTCCAGGTGGGGTCCTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTGAATGGCTGCTCCTCTaGCTAGAATCACCACTTGCA | + |
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Preference number: 4 (lower is better) Translates to: CSRWGPRNATILPGPVLAEWLLL*LESPLA Trigger: TGCAAGTGGTGATTCTAGTCAGAGGAGCAGCCATTC...AGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAGGACCCCACCTGGAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
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| CDS-3UTR TCA 90 bp | AAGGCTTTCAGTCTCCCATTAGCACTGGGGAAGGGAGGACACAACAAAAGCAAATGGTCTGGTACACCATaGTCGGGCCAAAGCTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: KAFSLPLALGKGGHNKSKWSGTP*SGQSSA Trigger: GGCAGAGCTTTGGCCCGATCATGGTGTACCAGACCA...TTTGCTTTTGTTGTGTCCTCCCTTCCCCAGTGCTAATGGGAGACTGAAAGCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
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| CDS-3UTR GCA 90 bp | TGTTCCAGGTGGGGTCCTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTTTTCAGACCACTAAATaGCCCAGGTCGGATCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CSRWGPRNATILPGPVLAFQTTK*PRSDLL Trigger: CAGGAGATCCGACCTGGGGCATTTAGTGGTCTGAAA...AGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAGGACCCCACCTGGAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR GCA 90 bp | TGTTCCAGGTGGGGTCCTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTATTCAGTTTGCTGAATaGCCCTGCCTCGATGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CSRWGPRNATILPGPVLAIQFAE*PCLDGA Trigger: AGCACCATCGAGGCAGGGGCATTCAGCAAACTGAAT...AGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAGGACCCCACCTGGAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR GCA 90 bp | TGTTCCAGGTGGGGTCCTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTTTTCAGTATCTCCCCTaGATGCTTAGCGGGAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: CSRWGPRNATILPGPVLAFQYLP*MLSGRL Trigger: GAGTCTCCCGCTAAGCATGCAGGGGAGATACTGAAA...AGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAGGACCCCACCTGGAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR CCA 90 bp | AAGGCTTTCAGTCTCCCATTAGCACTGGGGAAGGGAGGACACAACAAAAGCAAATGGCCGGCTGGCTTTTaGAGCTCTGGTTGGGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: KAFSLPLALGKGGHNKSKWPAGF*SSGWVE Trigger: CTCAACCCAACCAGAGCTCCAAAAGCCAGCCGGCCA...TTTGCTTTTGTTGTGTCCTCCCTTCCCCAGTGCTAATGGGAGACTGAAAGCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR CCA 90 bp | TGTTCCAGGTGGGGTCCTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTGACGATTTCTCATTTTaGGTGGCCGGCTGGCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: CSRWGPRNATILPGPVLADDFSF*VAGWLL Trigger: CAAAAGCCAGCCGGCCACCCAAAATGAGAAATCGTC...AGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAGGACCCCACCTGGAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR CCA 90 bp | CTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTAGGCTCACACTCATTAACGGGGGACTTGGTCTaGTACACCATGATCGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LGMPLSCLDQYLLGSHSLTGDLV*YTMIGP Trigger: TGGCCCGATCATGGTGTACCAGACCAAGTCCCCCGT...TAATGAGTGTGAGCCTAGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR TCA 90 bp | AAGGCTTTCAGTCTCCCATTAGCACTGGGGAAGGGAGGACACAACAAAAGCAAACCCCTCAGGTCTAAGTaGGTCAGCAGGACAAACCGA | + |
|
Preference number: 4 (lower is better) Translates to: KAFSLPLALGKGGHNKSKPLRSK*VSRTNR Trigger: TCGGTTTGTCCTGCTGACTCACTTAGACCTGAGGGG...TTTGCTTTTGTTGTGTCCTCCCTTCCCCAGTGCTAATGGGAGACTGAAAGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR TCA 90 bp | CTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTAGGCTCACACTCATTAGCTCTGCCGGTCTTTTaGCACAGTCACTCGAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LGMPLSCLDQYLLGSHSLALPVF*HSHSRS Trigger: ACTCCTCGAGTGACTGTGTCAAAAGACCGGCAGAGC...TAATGAGTGTGAGCCTAGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR TCA 90 bp | AAGGGAGGACACAACAAAAGCAAAGGCAGTGCTTCCAACAGTCTGGAGCTGCATAGGGTGGTCTGGCTTTaGCTGCCCCACAAAGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: KGGHNKSKGSASNSLELHRVVWL*LPHKAF Trigger: AAATGCTTTGTGGGGCAGTCAAAGCCAGACCACCCT...ATGCAGCTCCAGACTGTTGGAAGCACTGCCTTTGCTTTTGTTGTGTCCTCCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR CCA 90 bp | TGTTCCAGGTGGGGTCCTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTCACTTGCACTTTTTCTaGGACAGAGGTCTTGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CSRWGPRNATILPGPVLAHLHFF*DRGLVW Trigger: CCAGACAAGACCTCTGTCCCAGAAAAAGTGCAAGTG...AGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAGGACCCCACCTGGAACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR CCA 90 bp | CTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTAGGCTCACACTCATTATTTTGGGTGGCCGGCTaGCTTTTGGAGCTCTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LGMPLSCLDQYLLGSHSLFWVAG*LLELWL Trigger: CAACCAGAGCTCCAAAAGCCAGCCGGCCACCCAAAA...TAATGAGTGTGAGCCTAGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR CCA 90 bp | TGTTCCAGGTGGGGTCCTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTATAAAAGCAGGAAGCTaGTCCAGGACCCCTTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: CSRWGPRNATILPGPVLAIKAGS*SRTPFT Trigger: TGTGAAAGGGGTCCTGGACCAGCTTCCTGCTTTTAT...AGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAGGACCCCACCTGGAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| 3UTR CAA 72 bp | TTCTGTTCCAGGTGGGGTCCTAGGAATGCCACTATCTaGCCTGGACCAGTACTTGCTAGGCTCACACTCATT | + |
|
Preference number: 4 (lower is better) Translates to: FCSRWGPRNATI*PGPVLARLTLI Trigger: AATGAGTGTGAGCCTAGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAGGACCCCACCTGGAACAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR TCA 90 bp | CTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTAGGCTCACACTCATTACCACTGTTAACACACTaGGGAACCAAACGCCGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGMPLSCLDQYLLGSHSLPLLTH*GTKRRS Trigger: TGAGCGGCGTTTGGTTCCTCAGTGTGTTAACAGTGG...TAATGAGTGTGAGCCTAGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR GCA 90 bp | CTGGATTCTTGTCCCCACTGCCTACCTGGGAGTGATTTTCATTCAGGTAAAGCTCCAGGTCGGATCTCCTaGAGCCCATTGTTACCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LDSCPHCLPGSDFHSGKAPGRIS*SPLLPR Trigger: TCTAGGTAACAATGGGCTGCAGGAGATCCGACCTGG...AGCTTTACCTGAATGAAAATCACTCCCAGGTAGGCAGTGGGGACAAGAATCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR GCA 90 bp | AAGGGAGGACACAACAAAAGCAAAGGCAGTGCTTCCAACAGTCTGGAGCTGCATTTTGCTGAATGCCCCTaGCTCGATGGTGCTGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: KGGHNKSKGSASNSLELHFAECP*LDGADV Trigger: TACATCAGCACCATCGAGGCAGGGGCATTCAGCAAA...ATGCAGCTCCAGACTGTTGGAAGCACTGCCTTTGCTTTTGTTGTGTCCTCCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR CCA 90 bp | TGTTCCAGGTGGGGTCCTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTCATCTGACCCACAGGTaGAGGAATGTAGTTATAGAC | + |
|
Preference number: 4 (lower is better) Translates to: CSRWGPRNATILPGPVLAHLTHR*RNVVID Trigger: GTCTATAACTACATTCCTCCACCTGTGGGTCAGATG...AGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAGGACCCCACCTGGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR TCA 90 bp | AAGGCTTTCAGTCTCCCATTAGCACTGGGGAAGGGAGGACACAACAAAAGCAAACCATTGTCTGAGCTCTaGGAAGTACAGACACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KAFSLPLALGKGGHNKSKPLSEL*EVQTQL Trigger: CAGCTGTGTCTGTACTTCTCAGAGCTCAGACAATGG...TTTGCTTTTGTTGTGTCCTCCCTTCCCCAGTGCTAATGGGAGACTGAAAGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR TCA 90 bp | AAGGGAGGACACAACAAAAGCAAAGGCAGTGCTTCCAACAGTCTGGAGCTGCATAGGCACCTTCCTGAATaGCTGCAATCCTGTTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KGGHNKSKGSASNSLELHRHLPE*LQSCCF Trigger: GAAACAACAGGATTGCAGTCATTCAGGAAGGTGCCT...ATGCAGCTCCAGACTGTTGGAAGCACTGCCTTTGCTTTTGTTGTGTCCTCCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR TCA 90 bp | CTGGATTCTTGTCCCCACTGCCTACCTGGGAGTGATTTTCATTCAGGTAAAGCTCGCTCAGCAATATTCTaGTACAGCAGCTCAGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LDSCPHCLPGSDFHSGKARSAIF*YSSSGS Trigger: AGAGCCTGAGCTGCTGTATCAGAATATTGCTGAGCG...AGCTTTACCTGAATGAAAATCACTCCCAGGTAGGCAGTGGGGACAAGAATCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR TCA 90 bp | AAGGGAGGACACAACAAAAGCAAAGGCAGTGCTTCCAACAGTCTGGAGCTGCATGCGTCGAGATTCATATaGAGGGGCAAACTGCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KGGHNKSKGSASNSLELHASRFI*RGKLPF Trigger: AAAAGGCAGTTTGCCCCTTCATATGAATCTCGACGC...ATGCAGCTCCAGACTGTTGGAAGCACTGCCTTTGCTTTTGTTGTGTCCTCCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR GCA 90 bp | CTGGATTCTTGTCCCCACTGCCTACCTGGGAGTGATTTTCATTCAGGTAAAGCTAGTATCTCCCCTGCATaGTTAGCGGGAGACTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: LDSCPHCLPGSDFHSGKASISPA*LAGDSQ Trigger: TTGTGAGTCTCCCGCTAAGCATGCAGGGGAGATACT...AGCTTTACCTGAATGAAAATCACTCCCAGGTAGGCAGTGGGGACAAGAATCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR GCA 90 bp | CTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTAGGCTCACACTCATTAGATTGCGGTTTAGCTTaGAGTAAAGGGTGGTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LGMPLSCLDQYLLGSHSLDCGLA*SKGWSG Trigger: GCCAGACCACCCTTTACTGCAAGCTAAACCGCAATC...TAATGAGTGTGAGCCTAGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR CCA 90 bp | TGTTCCAGGTGGGGTCCTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTACCGAAACACATTACTaGGCAAAGACAGCAAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: CSRWGPRNATILPGPVLATETHY*AKTAKG Trigger: ACCTTTTGCTGTCTTTGCCCAGTAATGTGTTTCGGT...AGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAGGACCCCACCTGGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR CCA 90 bp | AAGGGAGGACACAACAAAAGCAAAGGCAGTGCTTCCAACAGTCTGGAGCTGCATTCTTGTCTGGTCAGCTaGGTCACATCTTTCCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: KGGHNKSKGSASNSLELHSCLVS*VTSFPC Trigger: ACATGGGAAAGATGTGACCCAGCTGACCAGACAAGA...ATGCAGCTCCAGACTGTTGGAAGCACTGCCTTTGCTTTTGTTGTGTCCTCCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR CCA 90 bp | CTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTAGGCTCACACTCATTAGACAGAGGTCTTGTCTaGTCAGCTGGGTCACATCTT | + |
|
Preference number: 4 (lower is better) Translates to: LGMPLSCLDQYLLGSHSLDRGLV*SAGSHL Trigger: AAGATGTGACCCAGCTGACCAGACAAGACCTCTGTC...TAATGAGTGTGAGCCTAGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR CCA 90 bp | CTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTAGGCTCACACTCATTAATTTCTCATTTTGGGTaGCCGGCTGGCTTTTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LGMPLSCLDQYLLGSHSLISHFG*PAGFWS Trigger: GCTCCAAAAGCCAGCCGGCCACCCAAAATGAGAAAT...TAATGAGTGTGAGCCTAGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR CCA 90 bp | CTGGATTCTTGTCCCCACTGCCTACCTGGGAGTGATTTTCATTCAGGTAAAGCTAGTTGGTGGCATTCCTaGGAACATTTGGCACTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LDSCPHCLPGSDFHSGKASWWHS*EHLALP Trigger: AGGGAGTGCCAAATGTTCCCAGGAATGCCACCAACT...AGCTTTACCTGAATGAAAATCACTCCCAGGTAGGCAGTGGGGACAAGAATCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR CCA 90 bp | CTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTAGGCTCACACTCATTATCGGTAATAGGCCACTaGGTCTCCTTCCTTCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LGMPLSCLDQYLLGSHSLSVIGH*VSFLLH Trigger: ATGCAGAAGGAAGGAGACCCAGTGGCCTATTACCGA...TAATGAGTGTGAGCCTAGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| 3UTR CAA 72 bp | GTCCTAGGAATGCCACTATCTTGCCTGGACCAGTACTaGCTAGGCTCACACTCATTACGATCTGCTTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VLGMPLSCLDQY*LGSHSLRSACE Trigger: TTCACAAGCAGATCGTAATGAGTGTGAGCCTAGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAGGAC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR TCA 90 bp | CTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTAGGCTCACACTCATTACTGCCTCGATGGTGCTaGTGTAATTGTAGTCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LGMPLSCLDQYLLGSHSLLPRWC*CNCSQL Trigger: AAGCTGACTACAATTACATCAGCACCATCGAGGCAG...TAATGAGTGTGAGCCTAGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR TCA 90 bp | AAGGGAGGACACAACAAAAGCAAAGGCAGTGCTTCCAACAGTCTGGAGCTGCATCTTTCCCATGTAACCTaGAAGGGGTTTCACAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: KGGHNKSKGSASNSLELHLSHVT*KGFHRQ Trigger: TTGTCTGTGAAACCCCTTTCAGGTTACATGGGAAAG...ATGCAGCTCCAGACTGTTGGAAGCACTGCCTTTGCTTTTGTTGTGTCCTCCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR TCA 90 bp | CTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTAGGCTCACACTCATTATTGAACATGTGTGTCTaGATGGCTGCTCCTCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: LGMPLSCLDQYLLGSHSLLNMCV*MAAPLT Trigger: AGTCAGAGGAGCAGCCATTCAGACACACATGTTCAA...TAATGAGTGTGAGCCTAGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR TCA 90 bp | CTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTAGGCTCACACTCATTAGTAAAGGCACCTTCCTaGATGACTGCAATCCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LGMPLSCLDQYLLGSHSLVKAPS*MTAILL Trigger: CAACAGGATTGCAGTCATTCAGGAAGGTGCCTTTAC...TAATGAGTGTGAGCCTAGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR GCA 90 bp | TGTTCCAGGTGGGGTCCTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTTCCCATGGGTTCTCTTaGAGATCTATCTGGATAAAA | + |
|
Preference number: 4 (lower is better) Translates to: CSRWGPRNATILPGPVLASHGFS*RSIWIK Trigger: TTTTATCCAGATAGATCTGCAAGAGAACCCATGGGA...AGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAGGACCCCACCTGGAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR GCA 90 bp | AAGGCTTTCAGTCTCCCATTAGCACTGGGGAAGGGAGGACACAACAAAAGCAAATGGTCTGGCTTTGACTaGCCCACAAAGCATTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KAFSLPLALGKGGHNKSKWSGFD*PTKHFL Trigger: CAGAAAATGCTTTGTGGGGCAGTCAAAGCCAGACCA...TTTGCTTTTGTTGTGTCCTCCCTTCCCCAGTGCTAATGGGAGACTGAAAGCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR CCA 90 bp | AAGGGAGGACACAACAAAAGCAAAGGCAGTGCTTCCAACAGTCTGGAGCTGCATTCTTGCAAATGTCTTTaGCAGTTTTGCGACTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: KGGHNKSKGSASNSLELHSCKCL*QFCDSR Trigger: CCGAGAGTCGCAAAACTGCCAAAGACATTTGCAAGA...ATGCAGCTCCAGACTGTTGGAAGCACTGCCTTTGCTTTTGTTGTGTCCTCCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR CCA 90 bp | CTGGATTCTTGTCCCCACTGCCTACCTGGGAGTGATTTTCATTCAGGTAAAGCTACAGGTGCAGTCCCATaGGTTCTCTTGCAGATCTAT | + |
|
Preference number: 4 (lower is better) Translates to: LDSCPHCLPGSDFHSGKATGAVP*VLLQIY Trigger: ATAGATCTGCAAGAGAACCCATGGGACTGCACCTGT...AGCTTTACCTGAATGAAAATCACTCCCAGGTAGGCAGTGGGGACAAGAATCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR CCA 90 bp | CTGGATTCTTGTCCCCACTGCCTACCTGGGAGTGATTTTCATTCAGGTAAAGCTATTCCTGGGAACATTTaGCACTCCCTTTCGACGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LDSCPHCLPGSDFHSGKAIPGNI*HSLSTL Trigger: AAGCGTCGAAAGGGAGTGCCAAATGTTCCCAGGAAT...AGCTTTACCTGAATGAAAATCACTCCCAGGTAGGCAGTGGGGACAAGAATCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR CCA 90 bp | CTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTAGGCTCACACTCATTACCTTCTGCATGTAGATaGGGTTTTGGCACATCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LGMPLSCLDQYLLGSHSLPSACR*GFGTSD Trigger: GTCAGATGTGCCAAAACCCCATCTACATGCAGAAGG...TAATGAGTGTGAGCCTAGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR CCA 90 bp | AAGGCTTTCAGTCTCCCATTAGCACTGGGGAAGGGAGGACACAACAAAAGCAAAAACTTCGAGGTAGTCTaGTTCCGATTGCGGTTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: KAFSLPLALGKGGHNKSKNFEVV*FRLRFS Trigger: GCTAAACCGCAATCGGAACCAGACTACCTCGAAGTT...TTTGCTTTTGTTGTGTCCTCCCTTCCCCAGTGCTAATGGGAGACTGAAAGCCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR TCA 90 bp | CTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTAGGCTCACACTCATTATCAAGAGGTTTCCGTTaGGAAACAGCTGATAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: LGMPLSCLDQYLLGSHSLSRGFR*ETADRC Trigger: GCATCTATCAGCTGTTTCTCAACGGAAACCTCTTGA...TAATGAGTGTGAGCCTAGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR TCA 90 bp | AAGGGAGGACACAACAAAAGCAAAGGCAGTGCTTCCAACAGTCTGGAGCTGCATCAAAATAGTCCCATCTaGCAGGTTAGGATTTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KGGHNKSKGSASNSLELHQNSPI*QVRIFW Trigger: CCAGAAAATCCTAACCTGTCAGATGGGACTATTTTG...ATGCAGCTCCAGACTGTTGGAAGCACTGCCTTTGCTTTTGTTGTGTCCTCCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR CCA 90 bp | AAGGGAGGACACAACAAAAGCAAAGGCAGTGCTTCCAACAGTCTGGAGCTGCATTCTTGCAGATCTATCTaGATAAAAGCAGGAAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KGGHNKSKGSASNSLELHSCRSI*IKAGSW Trigger: CCAGCTTCCTGCTTTTATCCAGATAGATCTGCAAGA...ATGCAGCTCCAGACTGTTGGAAGCACTGCCTTTGCTTTTGTTGTGTCCTCCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR CCA 90 bp | AAGGCTTTCAGTCTCCCATTAGCACTGGGGAAGGGAGGACACAACAAAAGCAAACAGGTTAGGATTTTCTaGACAAATAGCCTCCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KAFSLPLALGKGGHNKSKQVRIF*TNSLPS Trigger: GGAAGGGAGGCTATTTGTCCAGAAAATCCTAACCTG...TTTGCTTTTGTTGTGTCCTCCCTTCCCCAGTGCTAATGGGAGACTGAAAGCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR TCA 90 bp | CTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTAGGCTCACACTCATTACCATTGTTACCTAGATaGAGAGTCACCGCATTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LGMPLSCLDQYLLGSHSLPLLPR*RVTAFE Trigger: TTCAAATGCGGTGACTCTTCATCTAGGTAACAATGG...TAATGAGTGTGAGCCTAGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR TCA 90 bp | AAGGGAGGACACAACAAAAGCAAAGGCAGTGCTTCCAACAGTCTGGAGCTGCATGGTTGTCATTCAGGATaGGTACTTTCAGCTTATTCA | + |
|
Preference number: 4 (lower is better) Translates to: KGGHNKSKGSASNSLELHGCHSG*VLSAYS Trigger: TGAATAAGCTGAAAGTACTCATCCTGAATGACAACC...ATGCAGCTCCAGACTGTTGGAAGCACTGCCTTTGCTTTTGTTGTGTCCTCCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR TCA 90 bp | AAGGGAGGACACAACAAAAGCAAAGGCAGTGCTTCCAACAGTCTGGAGCTGCATCCAGCTGAATTTCCATaGTTCCTCCAATATGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: KGGHNKSKGSASNSLELHPAEFP*FLQYVQ Trigger: TTGAACATATTGGAGGAATCATGGAAATTCAGCTGG...ATGCAGCTCCAGACTGTTGGAAGCACTGCCTTTGCTTTTGTTGTGTCCTCCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR GCA 90 bp | CTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTAGGCTCACACTCATTAACAAGCAGCGGATCTTaGAAATGTCTTTGGCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LGMPLSCLDQYLLGSHSLTSSGS*KCLWQF Trigger: AAACTGCCAAAGACATTTGCAAGATCCGCTGCTTGT...TAATGAGTGTGAGCCTAGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR GCA 90 bp | CTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTAGGCTCACACTCATTAGAAGTAAGTCACAGGTaGAATTCCACGGGTTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LGMPLSCLDQYLLGSHSLEVSHR*NSTGFL Trigger: AAGAAAACCCGTGGAATTGCACCTGTGACTTACTTC...TAATGAGTGTGAGCCTAGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR GCA 90 bp | AAGGGAGGACACAACAAAAGCAAAGGCAGTGCTTCCAACAGTCTGGAGCTGCATTATGAAGGGGCAAACTaGCTTTTAGGTAAGGTACAA | + |
|
Preference number: 4 (lower is better) Translates to: KGGHNKSKGSASNSLELHYEGAN*LLGKVQ Trigger: TTGTACCTTACCTAAAAGGCAGTTTGCCCCTTCATA...ATGCAGCTCCAGACTGTTGGAAGCACTGCCTTTGCTTTTGTTGTGTCCTCCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR GCA 90 bp | AAGGGAGGACACAACAAAAGCAAAGGCAGTGCTTCCAACAGTCTGGAGCTGCATTCACAGCTGACTGATTaGAGTTTGTTTTTCCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: KGGHNKSKGSASNSLELHSQLTD*SLFFQN Trigger: GTTCTGGAAAAACAAACTGCAATCAGTCAGCTGTGA...ATGCAGCTCCAGACTGTTGGAAGCACTGCCTTTGCTTTTGTTGTGTCCTCCCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR GCA 90 bp | CTGGATTCTTGTCCCCACTGCCTACCTGGGAGTGATTTTCATTCAGGTAAAGCTAGATACTGCAAGCTCTaGAGTCCATCAAACATAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LDSCPHCLPGSDFHSGKARYCKL*SPSNIE Trigger: TTCTATGTTTGATGGACTGCAGAGCTTGCAGTATCT...AGCTTTACCTGAATGAAAATCACTCCCAGGTAGGCAGTGGGGACAAGAATCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR CCA 90 bp | CTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTAGGCTCACACTCATTATTACATCTAAGTTGGTaGCATTCCTGGGAACATTTG | + |
|
Preference number: 4 (lower is better) Translates to: LGMPLSCLDQYLLGSHSLLHLSW*HSWEHL Trigger: CAAATGTTCCCAGGAATGCCACCAACTTAGATGTAA...TAATGAGTGTGAGCCTAGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR CCA 90 bp | CTGGATTCTTGTCCCCACTGCCTACCTGGGAGTGATTTTCATTCAGGTAAAGCTAACTTACATCTAAGTTaGTGGCATTCCTGGGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: LDSCPHCLPGSDFHSGKANLHLS*WHSWEH Trigger: ATGTTCCCAGGAATGCCACCAACTTAGATGTAAGTT...AGCTTTACCTGAATGAAAATCACTCCCAGGTAGGCAGTGGGGACAAGAATCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR CCA 90 bp | AAGGGAGGACACAACAAAAGCAAAGGCAGTGCTTCCAACAGTCTGGAGCTGCATATTCTGTCTTGGTTTTaGCGTCGAGATTCATATGAA | + |
|
Preference number: 4 (lower is better) Translates to: KGGHNKSKGSASNSLELHILSWF*RRDSYE Trigger: TTCATATGAATCTCGACGCCAAAACCAAGACAGAAT...ATGCAGCTCCAGACTGTTGGAAGCACTGCCTTTGCTTTTGTTGTGTCCTCCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR CCA 90 bp | AAGGGAGGACACAACAAAAGCAAAGGCAGTGCTTCCAACAGTCTGGAGCTGCATTTATTGATTCTGTCTTaGTTTTGGCGTCGAGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: KGGHNKSKGSASNSLELHLLILS*FWRRDS Trigger: TGAATCTCGACGCCAAAACCAAGACAGAATCAATAA...ATGCAGCTCCAGACTGTTGGAAGCACTGCCTTTGCTTTTGTTGTGTCCTCCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR GCA 90 bp | CTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTAGGCTCACACTCATTACTGTTGTTTCCTAAATaGAACAAATCCAGTGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: LGMPLSCLDQYLLGSHSLLLFPK*NKSSEL Trigger: CAGTTCACTGGATTTGTTGCATTTAGGAAACAACAG...TAATGAGTGTGAGCCTAGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR GCA 90 bp | AAGGCTTTCAGTCTCCCATTAGCACTGGGGAAGGGAGGACACAACAAAAGCAAAGCACTTCAAGGTAATTaGCATTCAGATAAAGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KAFSLPLALGKGGHNKSKALQGN*HSDKVF Trigger: GAAGACTTTATCTGAATGGCAATTACCTTGAAGTGC...TTTGCTTTTGTTGTGTCCTCCCTTCCCCAGTGCTAATGGGAGACTGAAAGCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR CCA 90 bp | AAGGCTTTCAGTCTCCCATTAGCACTGGGGAAGGGAGGACACAACAAAAGCAAAATTGACAAACTCATTTaGATACAGTCTGGTCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KAFSLPLALGKGGHNKSKIDKLI*IQSGQE Trigger: CTCTTGACCAGACTGTATCCAAATGAGTTTGTCAAT...TTTGCTTTTGTTGTGTCCTCCCTTCCCCAGTGCTAATGGGAGACTGAAAGCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR CCA 90 bp | CTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTAGGCTCACACTCATTAGTGAACTTCCTTTCTTaGCAATTCACATTTAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: LGMPLSCLDQYLLGSHSLVNFLS*QFTFRP Trigger: TGGTCTAAATGTGAATTGCCAAGAAAGGAAGTTCAC...TAATGAGTGTGAGCCTAGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR CCA 90 bp | CTGGATTCTTGTCCCCACTGCCTACCTGGGAGTGATTTTCATTCAGGTAAAGCTGACCCATATTGTAACTaGAAGGAACTTACATCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LDSCPHCLPGSDFHSGKADPYCN*KELTSK Trigger: CTTAGATGTAAGTTCCTTCCAGTTACAATATGGGTC...AGCTTTACCTGAATGAAAATCACTCCCAGGTAGGCAGTGGGGACAAGAATCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR CCA 90 bp | CTGGATTCTTGTCCCCACTGCCTACCTGGGAGTGATTTTCATTCAGGTAAAGCTTTTCTAGCAACTCAGTaGCACTTATTGTGTAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LDSCPHCLPGSDFHSGKAFLATQ*HLLCKQ Trigger: TTGCTTACACAATAAGTGCCACTGAGTTGCTAGAAA...AGCTTTACCTGAATGAAAATCACTCCCAGGTAGGCAGTGGGGACAAGAATCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
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| 3UTR CAA 72 bp | AGCAAGAGTCCTGTGTTCAATTGTATTGAAATGGGCTaGCTAGTCCAGACGTTCAGGAATGCTATTGTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: SKSPVFNCIEMG*LVQTFRNAIVL Trigger: TAGCACAATAGCATTCCTGAACGTCTGGACTAGCAAGCCCATTTCAATACAATTGAACACAGGACTCTTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| 3UTR CAA 72 bp | GGAAACAAATTGAGTAAGAGAACCATCTGGAAGGCTTaGTTAACTCTAGCATTCAAATGTAGTATGTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GNKLSKRTIWKA*LTLAFKCSMFL Trigger: CAGAAACATACTACATTTGAATGCTAGAGTTAACAAAGCCTTCCAGATGGTTCTCTTACTCAATTTGTTTCC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS CCA 90 bp | CAGACACAGCTGCTGGGACAGGTGAGGGCCACGGGGGACTTGGTCTaGTACACCATGATCGGGCCAAAGCTCTGCCGGTCTTTTGACACA | + |
|
Preference number: 5 (lower is better) Translates to: QTQLLGQVRATGDLV*YTMIGPKLCRSFDT Trigger: TGTGTCAAAAGACCGGCAGAGCTTTGGCCCGATCATGGTGTACCAGACCAAGTCCCCCGTGGCCCTCACCTGTCCCAGCAGCTGTGTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036043.5 ENSMUST00000166241.2 |
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| CDS GCA 90 bp | GCCACGGGGGACTTGGTCTGGTACACCATGATCGGGCCAAAGCTCTaGCGGTCTTTTGACACAGTCACTCGAGGAGTCGGACGATTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: ATGDLVWYTMIGPKL*RSFDTVTRGVGRFL Trigger: GAGAAATCGTCCGACTCCTCGAGTGACTGTGTCAAAAGACCGGCAGAGCTTTGGCCCGATCATGGTGTACCAGACCAAGTCCCCCGTGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036043.5 ENSMUST00000166241.2 |
||
| CDS TCA 90 bp | CTTGGTCTGGTACACCATGATCGGGCCAAAGCTCTGCCGGTCTTTTaGCACAGTCACTCGAGGAGTCGGACGATTTCTCATTTTGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LGLVHHDRAKALPVF*HSHSRSRTISHFGW Trigger: CCACCCAAAATGAGAAATCGTCCGACTCCTCGAGTGACTGTGTCAAAAGACCGGCAGAGCTTTGGCCCGATCATGGTGTACCAGACCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036043.5 ENSMUST00000166241.2 |
||
| CDS-3UTR CAA 90 bp | CTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTAGGCTCACACTCATTAAGGGCCACGGGGGACTaGGTCTGGTACACCATGATC | + |
|
Preference number: 5 (lower is better) Translates to: LGMPLSCLDQYLLGSHSLRATGD*VWYTMI Trigger: GATCATGGTGTACCAGACCAAGTCCCCCGTGGCCCT...TAATGAGTGTGAGCCTAGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
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| CDS-3UTR CAA 90 bp | TGTTCCAGGTGGGGTCCTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTGCAGCTCAGGCTCTCTaGGTGTGGCCTGTTTTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: CSRWGPRNATILPGPVLAAAQAL*VWPVFL Trigger: TAGAAAAACAGGCCACACCAAGAGAGCCTGAGCTGC...AGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAGGACCCCACCTGGAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR CAA 90 bp | CTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTAGGCTCACACTCATTATCTGGGACAGAGGTCTaGTCTGGTCAGCTGGGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: LGMPLSCLDQYLLGSHSLSGTEV*SGQLGH Trigger: GTGACCCAGCTGACCAGACAAGACCTCTGTCCCAGA...TAATGAGTGTGAGCCTAGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
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| CDS-3UTR CAA 90 bp | TGTTCCAGGTGGGGTCCTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTATGATGACAGGAGAATaGGCATGTTCGGTCCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: CSRWGPRNATILPGPVLAMMTGE*ACSVQS Trigger: GGACTGGACCGAACATGCCAATTCTCCTGTCATCAT...AGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAGGACCCCACCTGGAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
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| CDS CCA 90 bp | CAGGTTGCCATAGCTGAAGTCCTGCAGATTTCGGTAATAGGCCACTaGGTCTCCTTCCTTCTGCATGTAGATGGGGTTTTGGCACATCTG | + |
|
Preference number: 5 (lower is better) Translates to: QVAIAEVLQISVIGH*VSFLLHVDGVLAHL Trigger: CAGATGTGCCAAAACCCCATCTACATGCAGAAGGAAGGAGACCCAGTGGCCTATTACCGAAATCTGCAGGACTTCAGCTATGGCAACCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036043.5 ENSMUST00000166241.2 |
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| CDS-3UTR CAA 90 bp | AAGGCTTTCAGTCTCCCATTAGCACTGGGGAAGGGAGGACACAACAAAAGCAAAAGCTCTGCCGGTCTTTaGACACAGTCACTCGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: KAFSLPLALGKGGHNKSKSSAGL*TQSLEE Trigger: CTCCTCGAGTGACTGTGTCAAAAGACCGGCAGAGCT...TTTGCTTTTGTTGTGTCCTCCCTTCCCCAGTGCTAATGGGAGACTGAAAGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
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| CDS CCA 90 bp | CGTTTTCCTTCTCTTCGCACAAGCAGCGGATCTTGCAAATGTCTTTaGCAGTTTTGCGACTCTCGGTCTGTAAGATCCCGGCCACTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: RFPSLRTSSGSCKCL*QFCDSRSVRSRPLL Trigger: TAACAGTGGCCGGGATCTTACAGACCGAGAGTCGCAAAACTGCCAAAGACATTTGCAAGATCCGCTGCTTGTGCGAAGAGAAGGAAAACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036043.5 ENSMUST00000166241.2 |
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| CDS-3UTR CAA 90 bp | CTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTAGGCTCACACTCATTAGTGTCCAGCCATGCCTaGAGAGGAAGTAAGTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: LGMPLSCLDQYLLGSHSLVSSHA*RGSKSQ Trigger: CTGTGACTTACTTCCTCTCAAGGCATGGCTGGACAC...TAATGAGTGTGAGCCTAGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR CAA 90 bp | CTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTAGGCTCACACTCATTAGGACGATTTCTCATTTaGGGTGGCCGGCTGGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LGMPLSCLDQYLLGSHSLGRFLI*GGRLAF Trigger: AAAAGCCAGCCGGCCACCCAAAATGAGAAATCGTCC...TAATGAGTGTGAGCCTAGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR CAA 90 bp | AAGGCTTTCAGTCTCCCATTAGCACTGGGGAAGGGAGGACACAACAAAAGCAAACATTCCTGGGAACATTaGGCACTCCCTTTCGACGCT | + |
|
Preference number: 5 (lower is better) Translates to: KAFSLPLALGKGGHNKSKHSWEH*ALPFDA Trigger: AGCGTCGAAAGGGAGTGCCAAATGTTCCCAGGAATG...TTTGCTTTTGTTGTGTCCTCCCTTCCCCAGTGCTAATGGGAGACTGAAAGCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR CAA 90 bp | TGTTCCAGGTGGGGTCCTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTGAACTTACATCTAAGTaGGTGGCATTCCTGGGAACA | + |
|
Preference number: 5 (lower is better) Translates to: CSRWGPRNATILPGPVLAELTSK*VAFLGT Trigger: TGTTCCCAGGAATGCCACCAACTTAGATGTAAGTTC...AGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAGGACCCCACCTGGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR CAA 90 bp | CTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTAGGCTCACACTCATTAAAGGGTGGTCTGGCTTaGACTGCCCCACAAAGCATT | + |
|
Preference number: 5 (lower is better) Translates to: LGMPLSCLDQYLLGSHSLKGGLA*TAPQSI Trigger: AATGCTTTGTGGGGCAGTCAAAGCCAGACCACCCTT...TAATGAGTGTGAGCCTAGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS TCA 90 bp | CCAGCAAAAGGCATTACTTTCAACCTGTTCCCCCTCAGGTCTAAGTaGGTCAGCAGGACAAACCGAAACACATTACTGGGCAAAGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: PAKGITFNLFPLRSK*VSRTNRNTLLGKDS Trigger: GCTGTCTTTGCCCAGTAATGTGTTTCGGTTTGTCCTGCTGACTCACTTAGACCTGAGGGGGAACAGGTTGAAAGTAATGCCTTTTGCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036043.5 ENSMUST00000166241.2 |
||
| CDS TCA 90 bp | ACTAGGCCTGCACTGGGAAGTTCTTTAACTCGCTCAGCAATATTCTaGTACAGCAGCTCAGGCTCTCTTGGTGTGGCCTGTTTTTCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: TRPALGSSLTRSAIF*YSSSGSLGVACFSS Trigger: GCTAGAAAAACAGGCCACACCAAGAGAGCCTGAGCTGCTGTATCAGAATATTGCTGAGCGAGTTAAAGAACTTCCCAGTGCAGGCCTAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036043.5 ENSMUST00000166241.2 |
||
| CDS CCA 90 bp | GATTTCGGTAATAGGCCACTGGGTCTCCTTCCTTCTGCATGTAGATaGGGTTTTGGCACATCTGACCCACAGGTGGAGGAATGTAGTTAT | + |
|
Preference number: 5 (lower is better) Translates to: DFGNRPLGLLPSACR*GFGTSDPQVEECSY Trigger: ATAACTACATTCCTCCACCTGTGGGTCAGATGTGCCAAAACCCCATCTACATGCAGAAGGAAGGAGACCCAGTGGCCTATTACCGAAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036043.5 ENSMUST00000166241.2 |
||
| CDS-3UTR CAA 90 bp | AAGGGAGGACACAACAAAAGCAAAGGCAGTGCTTCCAACAGTCTGGAGCTGCATATGTCTTTGGCAGTTTaGCGACTCTCGGTCTGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: KGGHNKSKGSASNSLELHMSLAV*RLSVCK Trigger: CTTACAGACCGAGAGTCGCAAAACTGCCAAAGACAT...ATGCAGCTCCAGACTGTTGGAAGCACTGCCTTTGCTTTTGTTGTGTCCTCCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR CAA 90 bp | TGTTCCAGGTGGGGTCCTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTTTGAGGTGCAGTCTTTaGAGAGTTTTCAGACCACTA | + |
|
Preference number: 5 (lower is better) Translates to: CSRWGPRNATILPGPVLALRCSL*RVFRPL Trigger: TAGTGGTCTGAAAACTCTCAAAAGACTGCACCTCAA...AGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAGGACCCCACCTGGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR CAA 90 bp | CTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTAGGCTCACACTCATTATTCAGCTTATTCAGTTaGCTGAATGCCCCTGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LGMPLSCLDQYLLGSHSLFSLFS*LNAPAS Trigger: CGAGGCAGGGGCATTCAGCAAACTGAATAAGCTGAA...TAATGAGTGTGAGCCTAGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR CAA 90 bp | AAGGCTTTCAGTCTCCCATTAGCACTGGGGAAGGGAGGACACAACAAAAGCAAAGGAGCTCTGGTTGGGTaGAGAGCAGGATTTGTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: KAFSLPLALGKGGHNKSKGALVG*RAGFVV Trigger: TACAACAAATCCTGCTCTCAACCCAACCAGAGCTCC...TTTGCTTTTGTTGTGTCCTCCCTTCCCCAGTGCTAATGGGAGACTGAAAGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR CAA 90 bp | CTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTAGGCTCACACTCATTATTTGGACTGGTAGGTTaGGGCTGTAGGTCAGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: LGMPLSCLDQYLLGSHSLFGLVG*GCRSEM Trigger: CATCTCTGACCTACAGCCCAAACCTACCAGTCCAAA...TAATGAGTGTGAGCCTAGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR CAA 90 bp | AAGGGAGGACACAACAAAAGCAAAGGCAGTGCTTCCAACAGTCTGGAGCTGCATACTCAGTGGCACTTATaGTGTAAGCAAGTGTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: KGGHNKSKGSASNSLELHTQWHL*CKQVWQ Trigger: CTGCCACACTTGCTTACACAATAAGTGCCACTGAGT...ATGCAGCTCCAGACTGTTGGAAGCACTGCCTTTGCTTTTGTTGTGTCCTCCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR CAA 90 bp | CTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTAGGCTCACACTCATTAGTAATTGTAGTCAGCTaGGAGGTACTCCAGACTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LGMPLSCLDQYLLGSHSLVIVVS*EVLQTL Trigger: GAGAGTCTGGAGTACCTCCAAGCTGACTACAATTAC...TAATGAGTGTGAGCCTAGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS CCA 90 bp | CTCGCTCAGCAATATTCTGATACAGCAGCTCAGGCTCTCTTGGTGTaGCCTGTTTTTCTAGCAACTCAGTGGCACTTATTGTGTAAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: LAQQYSDTAAQALLV*PVFLATQWHLLCKQ Trigger: TTGCTTACACAATAAGTGCCACTGAGTTGCTAGAAAAACAGGCCACACCAAGAGAGCCTGAGCTGCTGTATCAGAATATTGCTGAGCGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036043.5 ENSMUST00000166241.2 |
||
| CDS-3UTR CAA 90 bp | AAGGCTTTCAGTCTCCCATTAGCACTGGGGAAGGGAGGACACAACAAAAGCAAAATCTTGCAAATGTCTTaGGCAGTTTTGCGACTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: KAFSLPLALGKGGHNKSKILQMS*AVLRLS Trigger: CGAGAGTCGCAAAACTGCCAAAGACATTTGCAAGAT...TTTGCTTTTGTTGTGTCCTCCCTTCCCCAGTGCTAATGGGAGACTGAAAGCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR CAA 90 bp | CTGGATTCTTGTCCCCACTGCCTACCTGGGAGTGATTTTCATTCAGGTAAAGCTGTCCCATGGGTTCTCTaGCAGATCTATCTGGATAAA | + |
|
Preference number: 5 (lower is better) Translates to: LDSCPHCLPGSDFHSGKAVPWVL*QIYLDK Trigger: TTTATCCAGATAGATCTGCAAGAGAACCCATGGGAC...AGCTTTACCTGAATGAAAATCACTCCCAGGTAGGCAGTGGGGACAAGAATCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS-3UTR CAA 90 bp | CTAGGAATGCCACTATCTTGCCTGGACCAGTACTTGCTAGGCTCACACTCATTATCACAAGTCACCTCATaGATGATGACAGGAGAATTG | + |
|
Preference number: 5 (lower is better) Translates to: LGMPLSCLDQYLLGSHSLSQVTS*MMTGEL Trigger: CAATTCTCCTGTCATCATCAATGAGGTGACTTGTGA...TAATGAGTGTGAGCCTAGCAAGTACTGGTCCAGGCAAGATAGTGGCATTCCTAG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
||
| CDS CCA 90 bp | CATATTGTAACTGGAAGGAACTTACATCTAAGTTGGTGGCATTCCTaGGAACATTTGGCACTCCCTTTCGACGCTTCAGAACAAAGACGA | + |
|
Preference number: 5 (lower is better) Translates to: HIVTGRNLHLSWWHS*EHLALPFDASEQRR Trigger: TCGTCTTTGTTCTGAAGCGTCGAAAGGGAGTGCCAAATGTTCCCAGGAATGCCACCAACTTAGATGTAAGTTCCTTCCAGTTACAATATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036043.5 ENSMUST00000166241.2 |
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| CDS CCA 90 bp | TGTAAGACCCATATTGTAACTGGAAGGAACTTACATCTAAGTTGGTaGCATTCCTGGGAACATTTGGCACTCCCTTTCGACGCTTCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: CKTHIVTGRNLHLSW*HSWEHLALPFDASE Trigger: TTCTGAAGCGTCGAAAGGGAGTGCCAAATGTTCCCAGGAATGCCACCAACTTAGATGTAAGTTCCTTCCAGTTACAATATGGGTCTTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036043.5 ENSMUST00000166241.2 |
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| CDS CCA 90 bp | TGTTGTAAGACCCATATTGTAACTGGAAGGAACTTACATCTAAGTTaGTGGCATTCCTGGGAACATTTGGCACTCCCTTTCGACGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: CCKTHIVTGRNLHLS*WHSWEHLALPFDAS Trigger: TGAAGCGTCGAAAGGGAGTGCCAAATGTTCCCAGGAATGCCACCAACTTAGATGTAAGTTCCTTCCAGTTACAATATGGGTCTTACAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036043.5 ENSMUST00000166241.2 |
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| CDS-3UTR CAA 90 bp | CTGGATTCTTGTCCCCACTGCCTACCTGGGAGTGATTTTCATTCAGGTAAAGCTTCCAGTTTGTTGTTATaGAGGTGCAGTCTTTTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LDSCPHCLPGSDFHSGKASSLLL*RCSLLR Trigger: TCTCAAAAGACTGCACCTCAATAACAACAAACTGGA...AGCTTTACCTGAATGAAAATCACTCCCAGGTAGGCAGTGGGGACAAGAATCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
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| CDS-3UTR CAA 90 bp | CTGGATTCTTGTCCCCACTGCCTACCTGGGAGTGATTTTCATTCAGGTAAAGCTATGACTGCAATCCTGTaGTTTCCTAAATGCAACAAA | + |
|
Preference number: 5 (lower is better) Translates to: LDSCPHCLPGSDFHSGKAMTAIL*FPKCNK Trigger: TTTGTTGCATTTAGGAAACAACAGGATTGCAGTCAT...AGCTTTACCTGAATGAAAATCACTCCCAGGTAGGCAGTGGGGACAAGAATCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166241.2 |
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| CDS CCA 72 bp | CTGCTGGGACAGGTGAGGGCCACGGGGGACTTGGTCTaGTACACCATGATCGGGCCAAAGCTCTGCCGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LLGQVRATGDLV*YTMIGPKLCRS Trigger: AGACCGGCAGAGCTTTGGCCCGATCATGGTGTACCAGACCAAGTCCCCCGTGGCCCTCACCTGTCCCAGCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036043.5 ENSMUST00000166241.2 |
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| CDS CAA 72 bp | ACACAGCTGCTGGGACAGGTGAGGGCCACGGGGGACTaGGTCTGGTACACCATGATCGGGCCAAAGCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: TQLLGQVRATGD*VWYTMIGPKLC Trigger: GCAGAGCTTTGGCCCGATCATGGTGTACCAGACCAAGTCCCCCGTGGCCCTCACCTGTCCCAGCAGCTGTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036043.5 ENSMUST00000166241.2 |
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| CDS CAA 90 bp | GAAGTACAGACACAGCTGCTGGGACAGGTGAGGGCCACGGGGGACTaGGTCTGGTACACCATGATCGGGCCAAAGCTCTGCCGGTCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: EVQTQLLGQVRATGD*VWYTMIGPKLCRSF Trigger: AAAAGACCGGCAGAGCTTTGGCCCGATCATGGTGTACCAGACCAAGTCCCCCGTGGCCCTCACCTGTCCCAGCAGCTGTGTCTGTACTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036043.5 ENSMUST00000166241.2 |
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| CDS CAA 72 bp | GACACAGTCACTCGAGGAGTCGGACGATTTCTCATTTaGGGTGGCCGGCTGGCTTTTGGAGCTCTGGTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: DTVTRGVGRFLI*GGRLAFGALVG Trigger: CCCAACCAGAGCTCCAAAAGCCAGCCGGCCACCCAAAATGAGAAATCGTCCGACTCCTCGAGTGACTGTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036043.5 ENSMUST00000166241.2 |
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| CDS GCA 72 bp | GACTTGGTCTGGTACACCATGATCGGGCCAAAGCTCTaGCGGTCTTTTGACACAGTCACTCGAGGAGTCGGA | + |
|
Preference number: 6 (lower is better) Translates to: DLVWYTMIGPKL*RSFDTVTRGVG Trigger: TCCGACTCCTCGAGTGACTGTGTCAAAAGACCGGCAGAGCTTTGGCCCGATCATGGTGTACCAGACCAAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036043.5 ENSMUST00000166241.2 |
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| CDS CCA 72 bp | AGTCACTCGAGGAGTCGGACGATTTCTCATTTTGGGTaGCCGGCTGGCTTTTGGAGCTCTGGTTGGGTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: SHSRSRTISHFG*PAGFWSSGWVE Trigger: CTCAACCCAACCAGAGCTCCAAAAGCCAGCCGGCCACCCAAAATGAGAAATCGTCCGACTCCTCGAGTGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036043.5 ENSMUST00000166241.2 |
||
| CDS CCA 72 bp | ACACAGTCACTCGAGGAGTCGGACGATTTCTCATTTTaGGTGGCCGGCTGGCTTTTGGAGCTCTGGTTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: TQSLEESDDFSF*VAGWLLELWLG Trigger: ACCCAACCAGAGCTCCAAAAGCCAGCCGGCCACCCAAAATGAGAAATCGTCCGACTCCTCGAGTGACTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036043.5 ENSMUST00000166241.2 |
||
| CDS TCA 72 bp | GTACACCATGATCGGGCCAAAGCTCTGCCGGTCTTTTaGCACAGTCACTCGAGGAGTCGGACGATTTCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: VHHDRAKALPVF*HSHSRSRTISH Trigger: ATGAGAAATCGTCCGACTCCTCGAGTGACTGTGTCAAAAGACCGGCAGAGCTTTGGCCCGATCATGGTGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036043.5 ENSMUST00000166241.2 |
||
| CDS CCA 72 bp | AATAGGCCACTGGGTCTCCTTCCTTCTGCATGTAGATaGGGTTTTGGCACATCTGACCCACAGGTGGAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: NRPLGLLPSACR*GFGTSDPQVEE Trigger: TTCCTCCACCTGTGGGTCAGATGTGCCAAAACCCCATCTACATGCAGAAGGAAGGAGACCCAGTGGCCTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036043.5 ENSMUST00000166241.2 |
||
| CDS GCA 72 bp | GAGGTGCAGTCTTTTGAGAGTTTTCAGACCACTAAATaGCCCAGGTCGGATCTCCTGCAGCCCATTGTTACC | + |
|
Preference number: 6 (lower is better) Translates to: EVQSFESFQTTK*PRSDLLQPIVT Trigger: GGTAACAATGGGCTGCAGGAGATCCGACCTGGGGCATTTAGTGGTCTGAAAACTCTCAAAAGACTGCACCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036043.5 ENSMUST00000166241.2 |
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| CDS CAA 72 bp | TCCCCCACAAAAACAGTAATGGTGTCCAGCCATGCCTaGAGAGGAAGTAAGTCACAGGTGCAATTCCACGGG | + |
|
Preference number: 6 (lower is better) Translates to: SPTKTVMVSSHA*RGSKSQVQFHG Trigger: CCCGTGGAATTGCACCTGTGACTTACTTCCTCTCAAGGCATGGCTGGACACCATTACTGTTTTTGTGGGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000036043.5 ENSMUST00000166241.2 |
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| CDS CAA 72 bp | CCTGCATGCTTAGCGGGAGACTCACAAGTCACCTCATaGATGATGACAGGAGAATTGGCATGTTCGGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PACLAGDSQVTS*MMTGELACSVQ Trigger: CTGGACCGAACATGCCAATTCTCCTGTCATCATCAATGAGGTGACTTGTGAGTCTCCCGCTAAGCATGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036043.5 ENSMUST00000166241.2 |
||
| CDS CAA 90 bp | TTCTCTTCGCACAAGCAGCGGATCTTGCAAATGTCTTTGGCAGTTTaGCGACTCTCGGTCTGTAAGATCCCGGCCACTGTTAACACACTG | + |
|
Preference number: 6 (lower is better) Translates to: FSSHKQRILQMSLAV*RLSVCKIPATVNTL Trigger: CAGTGTGTTAACAGTGGCCGGGATCTTACAGACCGAGAGTCGCAAAACTGCCAAAGACATTTGCAAGATCCGCTGCTTGTGCGAAGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036043.5 ENSMUST00000166241.2 |
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| CDS CAA 90 bp | ACGTTTTCCTTCTCTTCGCACAAGCAGCGGATCTTGCAAATGTCTTaGGCAGTTTTGCGACTCTCGGTCTGTAAGATCCCGGCCACTGTT | + |
|
Preference number: 6 (lower is better) Translates to: TFSFSSHKQRILQMS*AVLRLSVCKIPATV Trigger: AACAGTGGCCGGGATCTTACAGACCGAGAGTCGCAAAACTGCCAAAGACATTTGCAAGATCCGCTGCTTGTGCGAAGAGAAGGAAAACGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036043.5 ENSMUST00000166241.2 |
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| CDS CAA 90 bp | TTAGCGGGAGACTCACAAGTCACCTCATTGATGATGACAGGAGAATaGGCATGTTCGGTCCAGTCCTTTAGCCCCATGATGTCACAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LAGDSQVTSLMMTGE*ACSVQSFSPMMSQV Trigger: CACCTGTGACATCATGGGGCTAAAGGACTGGACCGAACATGCCAATTCTCCTGTCATCATCAATGAGGTGACTTGTGAGTCTCCCGCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036043.5 ENSMUST00000166241.2 |
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| CDS CAA 90 bp | AGTATCTCCCCTGCATGCTTAGCGGGAGACTCACAAGTCACCTCATaGATGATGACAGGAGAATTGGCATGTTCGGTCCAGTCCTTTAGC | + |
|
Preference number: 6 (lower is better) Translates to: SISPACLAGDSQVTS*MMTGELACSVQSFS Trigger: GCTAAAGGACTGGACCGAACATGCCAATTCTCCTGTCATCATCAATGAGGTGACTTGTGAGTCTCCCGCTAAGCATGCAGGGGAGATACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036043.5 ENSMUST00000166241.2 |
||
| CDS TCA 72 bp | GGCATTACTTTCAACCTGTTCCCCCTCAGGTCTAAGTaGGTCAGCAGGACAAACCGAAACACATTACTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GITFNLFPLRSK*VSRTNRNTLLG Trigger: GCCCAGTAATGTGTTTCGGTTTGTCCTGCTGACTCACTTAGACCTGAGGGGGAACAGGTTGAAAGTAATGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036043.5 ENSMUST00000166241.2 |
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| CDS TCA 72 bp | GCACTGGGAAGTTCTTTAACTCGCTCAGCAATATTCTaGTACAGCAGCTCAGGCTCTCTTGGTGTGGCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: ALGSSLTRSAIF*YSSSGSLGVAC Trigger: ACAGGCCACACCAAGAGAGCCTGAGCTGCTGTATCAGAATATTGCTGAGCGAGTTAAAGAACTTCCCAGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036043.5 ENSMUST00000166241.2 |
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| CDS CCA 72 bp | GCACTTTTTCTGGGACAGAGGTCTTGTCTGGTCAGCTaGGTCACATCTTTCCCATGTAACCTGAAAGGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: ALFLGQRSCLVS*VTSFPCNLKGV Trigger: AACCCCTTTCAGGTTACATGGGAAAGATGTGACCCAGCTGACCAGACAAGACCTCTGTCCCAGAAAAAGTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036043.5 ENSMUST00000166241.2 |
||
| CDS CCA 72 bp | TCTGGTTCCGATTGCGGTTTAGCTTGCAGTAAAGGGTaGTCTGGCTTTGACTGCCCCACAAAGCATTTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SGSDCGLACSKG*SGFDCPTKHFL Trigger: CAGAAAATGCTTTGTGGGGCAGTCAAAGCCAGACCACCCTTTACTGCAAGCTAAACCGCAATCGGAACCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036043.5 ENSMUST00000166241.2 |
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| CDS CAA 72 bp | GCTCAGCAATATTCTGATACAGCAGCTCAGGCTCTCTaGGTGTGGCCTGTTTTTCTAGCAACTCAGTGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: AQQYSDTAAQAL*VWPVFLATQWH Trigger: GTGCCACTGAGTTGCTAGAAAAACAGGCCACACCAAGAGAGCCTGAGCTGCTGTATCAGAATATTGCTGAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036043.5 ENSMUST00000166241.2 |
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| CDS CAA 90 bp | ACTGGAAGGAACTTACATCTAAGTTGGTGGCATTCCTGGGAACATTaGGCACTCCCTTTCGACGCTTCAGAACAAAGACGAACAACCCCG | + |
|
Preference number: 6 (lower is better) Translates to: TGRNLHLSWWHSWEH*ALPFDASEQRRTTP Trigger: CGGGGTTGTTCGTCTTTGTTCTGAAGCGTCGAAAGGGAGTGCCAAATGTTCCCAGGAATGCCACCAACTTAGATGTAAGTTCCTTCCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036043.5 ENSMUST00000166241.2 |
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| CDS TCA 72 bp | GTCTGGTCAGCTGGGTCACATCTTTCCCATGTAACCTaGAAGGGGTTTCACAGACAATCTCCCCCACAAAAA | + |
|
Preference number: 6 (lower is better) Translates to: VWSAGSHLSHVT*KGFHRQSPPQK Trigger: TTTTTGTGGGGGAGATTGTCTGTGAAACCCCTTTCAGGTTACATGGGAAAGATGTGACCCAGCTGACCAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036043.5 ENSMUST00000166241.2 |
||
| CDS GCA 72 bp | GTACGTTTTCCTTCTCTTCGCACAAGCAGCGGATCTTaGAAATGTCTTTGGCAGTTTTGCGACTCTCGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: VRFPSLRTSSGS*KCLWQFCDSRS Trigger: AGACCGAGAGTCGCAAAACTGCCAAAGACATTTGCAAGATCCGCTGCTTGTGCGAAGAGAAGGAAAACGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036043.5 ENSMUST00000166241.2 |
||
| CDS CCA 72 bp | ATAGCTGAAGTCCTGCAGATTTCGGTAATAGGCCACTaGGTCTCCTTCCTTCTGCATGTAGATGGGGTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: IAEVLQISVIGH*VSFLLHVDGVL Trigger: CAAAACCCCATCTACATGCAGAAGGAAGGAGACCCAGTGGCCTATTACCGAAATCTGCAGGACTTCAGCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036043.5 ENSMUST00000166241.2 |
||
| CDS CAA 72 bp | GACTCACAAGTCACCTCATTGATGATGACAGGAGAATaGGCATGTTCGGTCCAGTCCTTTAGCCCCATGATG | + |
|
Preference number: 6 (lower is better) Translates to: DSQVTSLMMTGE*ACSVQSFSPMM Trigger: CATCATGGGGCTAAAGGACTGGACCGAACATGCCAATTCTCCTGTCATCATCAATGAGGTGACTTGTGAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036043.5 ENSMUST00000166241.2 |
||
| CDS TCA 72 bp | ATTTGTTGTAGGGGTCAGCCTTTGAACATGTGTGTCTaGATGGCTGCTCCTCTGACTAGAATCACCACTTGC | + |
|
Preference number: 6 (lower is better) Translates to: ICCRGQPLNMCV*MAAPLTRITTC Trigger: GCAAGTGGTGATTCTAGTCAGAGGAGCAGCCATTCAGACACACATGTTCAAAGGCTGACCCCTACAACAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036043.5 ENSMUST00000166241.2 |
||
| CDS GCA 72 bp | GGTTTAGCTTGCAGTAAAGGGTGGTCTGGCTTTGACTaGCCCACAAAGCATTTTCTGGGAGTCCCATATAAA | + |
|
Preference number: 6 (lower is better) Translates to: GLACSKGWSGFD*PTKHFLGVPYK Trigger: TTTATATGGGACTCCCAGAAAATGCTTTGTGGGGCAGTCAAAGCCAGACCACCCTTTACTGCAAGCTAAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036043.5 ENSMUST00000166241.2 |
||
| CDS CCA 72 bp | ACTGGAAGGAACTTACATCTAAGTTGGTGGCATTCCTaGGAACATTTGGCACTCCCTTTCGACGCTTCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: TGRNLHLSWWHS*EHLALPFDASE Trigger: TTCTGAAGCGTCGAAAGGGAGTGCCAAATGTTCCCAGGAATGCCACCAACTTAGATGTAAGTTCCTTCCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036043.5 ENSMUST00000166241.2 |
||
| CDS CCA 72 bp | GCTCTCTTGGTGTGGCCTGTTTTTCTAGCAACTCAGTaGCACTTATTGTGTAAGCAAGTGTGGCAGGTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: ALLVWPVFLATQ*HLLCKQVWQVL Trigger: AAGAACCTGCCACACTTGCTTACACAATAAGTGCCACTGAGTTGCTAGAAAAACAGGCCACACCAAGAGAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036043.5 ENSMUST00000166241.2 |
||
| CDS GCA 72 bp | GAGTACTTTCAGCTTATTCAGTTTGCTGAATGCCCCTaGCTCGATGGTGCTGATGTAATTGTAGTCAGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: EYFQLIQFAECP*LDGADVIVVSL Trigger: CAAGCTGACTACAATTACATCAGCACCATCGAGGCAGGGGCATTCAGCAAACTGAATAAGCTGAAAGTACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036043.5 ENSMUST00000166241.2 |
||
| CDS CAA 72 bp | AACTTACATCTAAGTTGGTGGCATTCCTGGGAACATTaGGCACTCCCTTTCGACGCTTCAGAACAAAGACGA | + |
|
Preference number: 6 (lower is better) Translates to: NLHLSWWHSWEH*ALPFDASEQRR Trigger: TCGTCTTTGTTCTGAAGCGTCGAAAGGGAGTGCCAAATGTTCCCAGGAATGCCACCAACTTAGATGTAAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036043.5 ENSMUST00000166241.2 |
||
| CDS CCA 72 bp | CATATTGTAACTGGAAGGAACTTACATCTAAGTTGGTaGCATTCCTGGGAACATTTGGCACTCCCTTTCGAC | + |
|
Preference number: 6 (lower is better) Translates to: HIVTGRNLHLSW*HSWEHLALPFD Trigger: GTCGAAAGGGAGTGCCAAATGTTCCCAGGAATGCCACCAACTTAGATGTAAGTTCCTTCCAGTTACAATATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036043.5 ENSMUST00000166241.2 |
||
| CDS CCA 72 bp | ACCCATATTGTAACTGGAAGGAACTTACATCTAAGTTaGTGGCATTCCTGGGAACATTTGGCACTCCCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: THIVTGRNLHLS*WHSWEHLALPF Trigger: GAAAGGGAGTGCCAAATGTTCCCAGGAATGCCACCAACTTAGATGTAAGTTCCTTCCAGTTACAATATGGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036043.5 ENSMUST00000166241.2 |
||
| CDS CAA 72 bp | GACCCATATTGTAACTGGAAGGAACTTACATCTAAGTaGGTGGCATTCCTGGGAACATTTGGCACTCCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: DPYCNWKELTSK*VAFLGTFGTPF Trigger: AAAGGGAGTGCCAAATGTTCCCAGGAATGCCACCAACTTAGATGTAAGTTCCTTCCAGTTACAATATGGGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036043.5 ENSMUST00000166241.2 |
||
| CDS TCA 72 bp | CTTCGTAAACTGGTCAGGTTTGTAAAGGCACCTTCCTaGATGACTGCAATCCTGTTGTTTCCTAAATGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: LRKLVRFVKAPS*MTAILLFPKCN Trigger: GTTGCATTTAGGAAACAACAGGATTGCAGTCATTCAGGAAGGTGCCTTTACAAACCTGACCAGTTTACGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036043.5 ENSMUST00000166241.2 |
||
| CDS CAA 72 bp | AAAGTGTCCTCTCGCAATACCTCCAGTTTGTTGTTATaGAGGTGCAGTCTTTTGAGAGTTTTCAGACCACTA | + |
|
Preference number: 6 (lower is better) Translates to: KVSSRNTSSLLL*RCSLLRVFRPL Trigger: TAGTGGTCTGAAAACTCTCAAAAGACTGCACCTCAATAACAACAAACTGGAGGTATTGCGAGAGGACACTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036043.5 ENSMUST00000166241.2 |
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