Pregenerated sensors for SLITRK1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075478Ensembl transcript IDs: ENSMUST00000100322.4
Found 193 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTCAGAGCAAAGAGCTAGCTCGCTGCACTCACAGGTCCACAGTCTaGTCTTTGTTTTCAGATGGGAGCTTAAGGGCCAGAGCCTCTGAG | + |
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Preference number: 1 (lower is better) Translates to: AQSKELARCTHRSTV*SLFSDGSLRARASE Trigger: CTCAGAGGCTCTGGCCCTTAAGCTCCCATCTGAAAACAAAGAGCAGACTGTGGACCTGTGAGTGCAGCGAGCTAGCTCTTTGCTCTGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| 3UTR GCA 90 bp | CTGGGCTTTGAGTCAAAAGGAGCTCAGAGCAAAGAGCTAGCTCGCTaGACTCACAGGTCCACAGTCTGCTCTTTGTTTTCAGATGGGAGC | + |
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Preference number: 1 (lower is better) Translates to: LGFESKGAQSKELAR*THRSTVCSLFSDGS Trigger: GCTCCCATCTGAAAACAAAGAGCAGACTGTGGACCTGTGAGTGCAGCGAGCTAGCTCTTTGCTCTGAGCTCCTTTTGACTCAAAGCCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| 3UTR GCA 90 bp | TATTTATTTACAATACATTCATGCCTTCGTGCAACTGCCCATCCCTaGTTTACCAACAGGGAGCCATCTTCGGGCTATCCACAGGGGAAA | + |
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Preference number: 1 (lower is better) Translates to: YLFTIHSCLRATAHP*FTNREPSSGYPQGK Trigger: TTTCCCCTGTGGATAGCCCGAAGATGGCTCCCTGTTGGTAAAGCAGGGATGGGCAGTTGCACGAAGGCATGAATGTATTGTAAATAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| 3UTR GCA 90 bp | GAGTCAAAGTTATTTATTTACAATACATTCATGCCTTCGTGCAACTaGCCATCCCTGCTTTACCAACAGGGAGCCATCTTCGGGCTATCC | + |
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Preference number: 1 (lower is better) Translates to: ESKLFIYNTFMPSCN*PSLLYQQGAIFGLS Trigger: GGATAGCCCGAAGATGGCTCCCTGTTGGTAAAGCAGGGATGGGCAGTTGCACGAAGGCATGAATGTATTGTAAATAAATAACTTTGACTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| 3UTR CCA 90 bp | TTAAATCAAATCTATCCTAACATCTCCAATCTATCTGCTGCAGTGTaGGCAGCAACACAAAAACAGCAGAGAGGGATTTCCAGTATTAAT | + |
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Preference number: 1 (lower is better) Translates to: LNQIYPNISNLSAAV*AATQKQQRGISSIN Trigger: ATTAATACTGGAAATCCCTCTCTGCTGTTTTTGTGTTGCTGCCCACACTGCAGCAGATAGATTGGAGATGTTAGGATAGATTTGATTTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| 3UTR-3UTR CCA 90 bp | TTAAATCAAATCTATCCTAACATCTCCAATCTATCTGCTGCAGTGTGGGCAGCACGTCTCCAGTCGCAGTaGGGCGGGGCGGTAGAGGGG | + |
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Preference number: 2 (lower is better) Translates to: LNQIYPNISNLSAAVWAARLQSQ*GGAVEG Trigger: CCCCTCTACCGCCCCGCCCCACTGCGACTGGAGACG...TGCTGCCCACACTGCAGCAGATAGATTGGAGATGTTAGGATAGATTTGATTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| 3UTR CAA 90 bp | AGCAAAGAGCTAGCTCGCTGCACTCACAGGTCCACAGTCTGCTCTTaGTTTTCAGATGGGAGCTTAAGGGCCAGAGCCTCTGAGTTGAGT | + |
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Preference number: 2 (lower is better) Translates to: SKELARCTHRSTVCS*FSDGSLRARASELS Trigger: ACTCAACTCAGAGGCTCTGGCCCTTAAGCTCCCATCTGAAAACAAAGAGCAGACTGTGGACCTGTGAGTGCAGCGAGCTAGCTCTTTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| 3UTR-3UTR CCA 90 bp | GCAGAGTCCCTGGAGCGTGTGGATTCCATGCGAGCCATGCAGCACTTTTGTTTGCTCTTTGTTTTCAGATaGGAGCTTAAGGGCCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: AESLERVDSMRAMQHFCLLFVFR*ELKGQS Trigger: GCTCTGGCCCTTAAGCTCCCATCTGAAAACAAAGAG...CAAACAAAAGTGCTGCATGGCTCGCATGGAATCCACACGCTCCAGGGACTCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| 3UTR-3UTR GCA 90 bp | CTGTCTTTGACATACTTCTTGAGACTGGATGTGTGGTGGAATGCAAAGACCATCGCAACTGCCCATCCCTaGTTTACCAACAGGGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: LSLTYFLRLDVWWNAKTIATAHP*FTNREP Trigger: TGGCTCCCTGTTGGTAAAGCAGGGATGGGCAGTTGC...GATGGTCTTTGCATTCCACCACACATCCAGTCTCAAGAAGTATGTCAAAGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| 3UTR-3UTR CCA 90 bp | AGTAAGTTTTCACGTGCTTCCTCGGTTCTTTGTTCCTACTTTATAAGTAAGACTGGCGGCAGGGGAGGATaGACGTCTTCCTGCACTCCT | + |
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Preference number: 2 (lower is better) Translates to: SKFSRASSVLCSYFISKTGGRGG*TSSCTP Trigger: AGGAGTGCAGGAAGACGTCCATCCTCCCCTGCCGCC...AGTCTTACTTATAAAGTAGGAACAAAGAACCGAGGAAGCACGTGAAAACTTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| 3UTR CAA 90 bp | GAGCTGGCTTTTAATTCTGCAGTTTCAGTCTGTGGCCTCCTGTCTTaGACATACTTCTTGAGACTGGATGTGTGGTGGAATGCAAAGACC | + |
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Preference number: 2 (lower is better) Translates to: ELAFNSAVSVCGLLS*TYFLRLDVWWNAKT Trigger: GGTCTTTGCATTCCACCACACATCCAGTCTCAAGAAGTATGTCAAAGACAGGAGGCCACAGACTGAAACTGCAGAATTAAAAGCCAGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| 3UTR-3UTR GCA 90 bp | TTAAATCAAATCTATCCTAACATCTCCAATCTATCTGCTGCAGTGTGGGCAGCATTCTGGCAGGCCCCATaGTGGGCTTTGAGTCAAAAG | + |
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Preference number: 2 (lower is better) Translates to: LNQIYPNISNLSAAVWAAFWQAP*WALSQK Trigger: CTTTTGACTCAAAGCCCAGCATGGGGCCTGCCAGAA...TGCTGCCCACACTGCAGCAGATAGATTGGAGATGTTAGGATAGATTTGATTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| 3UTR-3UTR GCA 90 bp | AAATCTATCCTAACATCTCCAATCTATCTGCTGCAGTGTGGGCAGCAACACAAAAGCGTGTGGATTCCATaGGAGCCATGCAGCACTTTT | + |
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Preference number: 2 (lower is better) Translates to: KSILTSPIYLLQCGQQHKSVWIP*EPCSTF Trigger: AAAAGTGCTGCATGGCTCGCATGGAATCCACACGCT...TTTGTGTTGCTGCCCACACTGCAGCAGATAGATTGGAGATGTTAGGATAGATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| 3UTR-3UTR CCA 90 bp | AGTAAGTTTTCACGTGCTTCCTCGGTTCTTTGTTCCTACTTTATAAGTAAGACTAGTCCCTGGAGCGTGTaGATTCCATGCGAGCCATGC | + |
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Preference number: 2 (lower is better) Translates to: SKFSRASSVLCSYFISKTSPWSV*IPCEPC Trigger: GCATGGCTCGCATGGAATCCACACGCTCCAGGGACT...AGTCTTACTTATAAAGTAGGAACAAAGAACCGAGGAAGCACGTGAAAACTTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| 3UTR-3UTR TCA 90 bp | AGTAAGTTTTCACGTGCTTCCTCGGTTCTTTGTTCCTACTTTATAAGTAAGACTCCCCATGCTGGGCTTTaGGTCAAAAGGAGCTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: SKFSRASSVLCSYFISKTPHAGL*VKRSSE Trigger: CTCTGAGCTCCTTTTGACTCAAAGCCCAGCATGGGG...AGTCTTACTTATAAAGTAGGAACAAAGAACCGAGGAAGCACGTGAAAACTTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| 3UTR-3UTR TCA 90 bp | AAATCTATCCTAACATCTCCAATCTATCTGCTGCAGTGTGGGCAGCAACACAAACTGGATGGGAGGTTGTaGGGAGAAAAGCTAGTGAAT | + |
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Preference number: 2 (lower is better) Translates to: KSILTSPIYLLQCGQQHKLDGRL*GEKLVN Trigger: ATTCACTAGCTTTTCTCCTCACAACCTCCCATCCAG...TTTGTGTTGCTGCCCACACTGCAGCAGATAGATTGGAGATGTTAGGATAGATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| 3UTR-3UTR GCA 90 bp | ACAGTCATCTTCCATTATCATTATGAAATGCAGCCCATAAGCAAAAGTATCAGGGGATGGACGTCTTCCTaGACTCCTTCCCCTTTAGGG | + |
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Preference number: 2 (lower is better) Translates to: TVIFHYHYEMQPISKSIRGWTSS*TPSPLG Trigger: CCCTAAAGGGGAAGGAGTGCAGGAAGACGTCCATCC...CCTGATACTTTTGCTTATGGGCTGCATTTCATAATGATAATGGAAGATGACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| 3UTR-3UTR GCA 90 bp | TTAAATCAAATCTATCCTAACATCTCCAATCTATCTGCTGCAGTGTGGGCAGCAATGCCTTCGTGCAACTaGCCATCCCTGCTTTACCAA | + |
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Preference number: 2 (lower is better) Translates to: LNQIYPNISNLSAAVWAAMPSCN*PSLLYQ Trigger: TTGGTAAAGCAGGGATGGGCAGTTGCACGAAGGCAT...TGCTGCCCACACTGCAGCAGATAGATTGGAGATGTTAGGATAGATTTGATTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| 3UTR-3UTR CCA 90 bp | ACAGTCATCTTCCATTATCATTATGAAATGCAGCCCATAAGCAAAAGTATCAGGTGGCAGGCCCCATGCTaGGCTTTGAGTCAAAAGGAG | + |
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Preference number: 2 (lower is better) Translates to: TVIFHYHYEMQPISKSIRWQAPC*ALSQKE Trigger: CTCCTTTTGACTCAAAGCCCAGCATGGGGCCTGCCA...CCTGATACTTTTGCTTATGGGCTGCATTTCATAATGATAATGGAAGATGACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| 3UTR CAA 90 bp | AATTCTGCAGTTTCAGTCTGTGGCCTCCTGTCTTTGACATACTTCTaGAGACTGGATGTGTGGTGGAATGCAAAGACCATCAATATGTGT | + |
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Preference number: 2 (lower is better) Translates to: NSAVSVCGLLSLTYF*RLDVWWNAKTINMC Trigger: ACACATATTGATGGTCTTTGCATTCCACCACACATCCAGTCTCAAGAAGTATGTCAAAGACAGGAGGCCACAGACTGAAACTGCAGAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| 3UTR-3UTR GCA 90 bp | AGTAAGTTTTCACGTGCTTCCTCGGTTCTTTGTTCCTACTTTATAAGTAAGACTAAAGAGCTAGCTCGCTaGACTCACAGGTCCACAGTC | + |
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Preference number: 2 (lower is better) Translates to: SKFSRASSVLCSYFISKTKELAR*THRSTV Trigger: GACTGTGGACCTGTGAGTGCAGCGAGCTAGCTCTTT...AGTCTTACTTATAAAGTAGGAACAAAGAACCGAGGAAGCACGTGAAAACTTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| 3UTR-3UTR GCA 90 bp | ACAGTCATCTTCCATTATCATTATGAAATGCAGCCCATAAGCAAAAGTATCAGGACATCTCGTTCCACCTaGTCCTGGGGGCTTTTACTG | + |
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Preference number: 2 (lower is better) Translates to: TVIFHYHYEMQPISKSIRTSRST*SWGLLL Trigger: CAGTAAAAGCCCCCAGGAGCAGGTGGAACGAGATGT...CCTGATACTTTTGCTTATGGGCTGCATTTCATAATGATAATGGAAGATGACTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| 3UTR-3UTR GCA 90 bp | AAATCTATCCTAACATCTCCAATCTATCTGCTGCAGTGTGGGCAGCAACACAAAATTCCATGCGAGCCATaGAGCACTTTTGTTTGTTTG | + |
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Preference number: 2 (lower is better) Translates to: KSILTSPIYLLQCGQQHKIPCEP*STFVCL Trigger: CAAACAAACAAAAGTGCTGCATGGCTCGCATGGAAT...TTTGTGTTGCTGCCCACACTGCAGCAGATAGATTGGAGATGTTAGGATAGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| 3UTR-3UTR CCA 90 bp | AAATCTATCCTAACATCTCCAATCTATCTGCTGCAGTGTGGGCAGCAACACAAAGAAAGTTTGATACGATaGGACTTATCAGGTAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: KSILTSPIYLLQCGQQHKESLIR*DLSGKR Trigger: CCTCTTACCTGATAAGTCCCATCGTATCAAACTTTC...TTTGTGTTGCTGCCCACACTGCAGCAGATAGATTGGAGATGTTAGGATAGATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| 3UTR-3UTR CCA 90 bp | CTGTCTTTGACATACTTCTTGAGACTGGATGTGTGGTGGAATGCAAAGACCATCGCCTTAACCAGAAATTaGTATGATAAGAGTGAAACA | + |
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Preference number: 2 (lower is better) Translates to: LSLTYFLRLDVWWNAKTIALTRN*YDKSET Trigger: TGTTTCACTCTTATCATACCAATTTCTGGTTAAGGC...GATGGTCTTTGCATTCCACCACACATCCAGTCTCAAGAAGTATGTCAAAGACAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| 3UTR-3UTR GCA 90 bp | AGTCAATTAAATCAAATCTATCCTAACATCTCCAATCTATCTGCTGCAGTGTGGACATACGCTCTGAACTaGCTACCAATCACAAATAAG | + |
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Preference number: 2 (lower is better) Translates to: SQLNQIYPNISNLSAAVWTYALN*LPITNK Trigger: CTTATTTGTGATTGGTAGGCAGTTCAGAGCGTATGT...CCACACTGCAGCAGATAGATTGGAGATGTTAGGATAGATTTGATTTAATTGACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| 3UTR-3UTR CCA 90 bp | AGTCAATTAAATCAAATCTATCCTAACATCTCCAATCTATCTGCTGCAGTGTGGCAAATAAGGGCGAAATaGCACTTTCTGATTATACTG | + |
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Preference number: 2 (lower is better) Translates to: SQLNQIYPNISNLSAAVWQIRAK*HFLIIL Trigger: CAGTATAATCAGAAAGTGCCATTTCGCCCTTATTTG...CCACACTGCAGCAGATAGATTGGAGATGTTAGGATAGATTTGATTTAATTGACT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| 3UTR TCA 72 bp | TACGATGGGACTTATCAGGTAAGAGGATGGGTGCTGTaGCAGCGTCTCCAGTCGCAGTGGGGCGGGGCGGTA | + |
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Preference number: 3 (lower is better) Translates to: YDGTYQVRGWVL*QRLQSQWGGAV Trigger: TACCGCCCCGCCCCACTGCGACTGGAGACGCTGTCACAGCACCCATCCTCTTACCTGATAAGTCCCATCGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| 3UTR CCA 72 bp | AGCATTAGGAGAGGGCCGAGGGAGGGCAGAGTTGTCTaGGTAGCATGGTACTTTATGGGCAGTGGAAAAGCA | + |
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Preference number: 3 (lower is better) Translates to: SIRRGPREGRVV*VAWYFMGSGKA Trigger: TGCTTTTCCACTGCCCATAAAGTACCATGCTACCCAGACAACTCTGCCCTCCCTCGGCCCTCTCCTAATGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| 3UTR GCA 72 bp | AAAGAGCTAGCTCGCTGCACTCACAGGTCCACAGTCTaGTCTTTGTTTTCAGATGGGAGCTTAAGGGCCAGA | + |
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Preference number: 3 (lower is better) Translates to: KELARCTHRSTV*SLFSDGSLRAR Trigger: TCTGGCCCTTAAGCTCCCATCTGAAAACAAAGAGCAGACTGTGGACCTGTGAGTGCAGCGAGCTAGCTCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| 3UTR GCA 72 bp | ACAATACATTCATGCCTTCGTGCAACTGCCCATCCCTaGTTTACCAACAGGGAGCCATCTTCGGGCTATCCA | + |
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Preference number: 3 (lower is better) Translates to: TIHSCLRATAHP*FTNREPSSGYP Trigger: TGGATAGCCCGAAGATGGCTCCCTGTTGGTAAAGCAGGGATGGGCAGTTGCACGAAGGCATGAATGTATTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| 3UTR GCA 72 bp | GAGTCAAAAGGAGCTCAGAGCAAAGAGCTAGCTCGCTaGACTCACAGGTCCACAGTCTGCTCTTTGTTTTCA | + |
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Preference number: 3 (lower is better) Translates to: ESKGAQSKELAR*THRSTVCSLFS Trigger: TGAAAACAAAGAGCAGACTGTGGACCTGTGAGTGCAGCGAGCTAGCTCTTTGCTCTGAGCTCCTTTTGACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| 3UTR CCA 72 bp | ATCTATCCTAACATCTCCAATCTATCTGCTGCAGTGTaGGCAGCAACACAAAAACAGCAGAGAGGGATTTCC | + |
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Preference number: 3 (lower is better) Translates to: IYPNISNLSAAV*AATQKQQRGIS Trigger: GGAAATCCCTCTCTGCTGTTTTTGTGTTGCTGCCCACACTGCAGCAGATAGATTGGAGATGTTAGGATAGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| 3UTR-3UTR CAA 90 bp | CTGTCTTTGACATACTTCTTGAGACTGGATGTGTGGTGGAATGCAAAGACCATCCGTTTTCAGCAGATGTaGAATTCAAAATGCCAGCAG | + |
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Preference number: 3 (lower is better) Translates to: LSLTYFLRLDVWWNAKTIRFQQM*NSKCQQ Trigger: CTGCTGGCATTTTGAATTCAACATCTGCTGAAAACG...GATGGTCTTTGCATTCCACCACACATCCAGTCTCAAGAAGTATGTCAAAGACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| 3UTR GCA 72 bp | TTATTTATTTACAATACATTCATGCCTTCGTGCAACTaGCCATCCCTGCTTTACCAACAGGGAGCCATCTTC | + |
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Preference number: 3 (lower is better) Translates to: LFIYNTFMPSCN*PSLLYQQGAIF Trigger: GAAGATGGCTCCCTGTTGGTAAAGCAGGGATGGGCAGTTGCACGAAGGCATGAATGTATTGTAAATAAATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| 3UTR CCA 72 bp | CTCCTGTCTTTGACATACTTCTTGAGACTGGATGTGTaGTGGAATGCAAAGACCATCAATATGTGTGGTTTG | + |
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Preference number: 3 (lower is better) Translates to: LLSLTYFLRLDV*WNAKTINMCGL Trigger: CAAACCACACATATTGATGGTCTTTGCATTCCACCACACATCCAGTCTCAAGAAGTATGTCAAAGACAGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| 3UTR TCA 72 bp | CAATTGCCAGAGGACAGTCATCTTCCATTATCATTATaGAATGCAGCCCATAAGCAAAAGTATCAGGGAAAA | + |
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Preference number: 3 (lower is better) Translates to: QLPEDSHLPLSL*NAAHKQKYQGK Trigger: TTTTCCCTGATACTTTTGCTTATGGGCTGCATTTCATAATGATAATGGAAGATGACTGTCCTCTGGCAATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS-3UTR GCA 90 bp | TGCAACTGCCCATCCCTGCTTTACCAACAGGGAGCCATCTTCGGGCTATCCACAAGCCGTTTCACCAGCTaGAGCCCCAGAAATGCCCCC | + |
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Preference number: 4 (lower is better) Translates to: CNCPSLLYQQGAIFGLSTSRFTS*SPRNAP Trigger: GGGGGCATTTCTGGGGCTGCAGCTGGTGAAACGGCT...TGTGGATAGCCCGAAGATGGCTCCCTGTTGGTAAAGCAGGGATGGGCAGTTGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS-3UTR CCA 90 bp | GCAGAGTCCCTGGAGCGTGTGGATTCCATGCGAGCCATGCAGCACTTTTGTTTGCTTTACCCTGGAGCCTaGTGGGGGCTTCGCAGACCA | + |
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Preference number: 4 (lower is better) Translates to: AESLERVDSMRAMQHFCLLYPGA*WGLRRP Trigger: TGGTCTGCGAAGCCCCCACCAGGCTCCAGGGTAAAG...CAAACAAAAGTGCTGCATGGCTCGCATGGAATCCACACGCTCCAGGGACTCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS-3UTR GCA 90 bp | TGCAACTGCCCATCCCTGCTTTACCAACAGGGAGCCATCTTCGGGCTATCCACAGCCCCTGGGGTAGCATaGTCATCCTGCCCATTTGTC | + |
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Preference number: 4 (lower is better) Translates to: CNCPSLLYQQGAIFGLSTAPGVA*SSCPFV Trigger: GACAAATGGGCAGGATGAGCATGCTACCCCAGGGGC...TGTGGATAGCCCGAAGATGGCTCCCTGTTGGTAAAGCAGGGATGGGCAGTTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS-3UTR CCA 90 bp | GCAGAGTCCCTGGAGCGTGTGGATTCCATGCGAGCCATGCAGCACTTTTGTTTGTGTCTTGAAAGGAGTTaGCAGGGGGCCAGGAGCGAA | + |
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Preference number: 4 (lower is better) Translates to: AESLERVDSMRAMQHFCLCLERS*QGARSE Trigger: TTCGCTCCTGGCCCCCTGCCAACTCCTTTCAAGACA...CAAACAAAAGTGCTGCATGGCTCGCATGGAATCCACACGCTCCAGGGACTCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS-3UTR CCA 90 bp | GCAGAGTCCCTGGAGCGTGTGGATTCCATGCGAGCCATGCAGCACTTTTGTTTGGGACCAACACGGAGATaGACACCCTGCTGGTGTCTA | + |
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Preference number: 4 (lower is better) Translates to: AESLERVDSMRAMQHFCLGPTRR*TPCWCL Trigger: TAGACACCAGCAGGGTGTCCATCTCCGTGTTGGTCC...CAAACAAAAGTGCTGCATGGCTCGCATGGAATCCACACGCTCCAGGGACTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS-3UTR TCA 90 bp | TGCAACTGCCCATCCCTGCTTTACCAACAGGGAGCCATCTTCGGGCTATCCACAGTTCCGTGGTTTCATTaGGGTCTTTACCCTGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: CNCPSLLYQQGAIFGLSTVPWFH*GLYPGA Trigger: GGCTCCAGGGTAAAGACCTCAATGAAACCACGGAAC...TGTGGATAGCCCGAAGATGGCTCCCTGTTGGTAAAGCAGGGATGGGCAGTTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS-3UTR GCA 90 bp | CCCTGCTTTACCAACAGGGAGCCATCTTCGGGCTATCCACAGGGGAAAAATAGAGGGGCGGTGAAGCGCTaGAGACTTGTGAAGCCCTTT | + |
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Preference number: 4 (lower is better) Translates to: PCFTNREPSSGYPQGKNRGAVKR*RLVKPF Trigger: AAAGGGCTTCACAAGTCTGCAGCGCTTCACCGCCCC...TCTATTTTTCCCCTGTGGATAGCCCGAAGATGGCTCCCTGTTGGTAAAGCAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS-3UTR TCA 90 bp | CACTCACAGGTCCACAGTCTGCTCTTTGTTTTCAGATGGGAGCTTAAGGGCCAGGGAGGTCGAGGTGGGTaGTGGGCACATACTGGAATA | + |
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Preference number: 4 (lower is better) Translates to: HSQVHSLLFVFRWELKGQGGRGG*WAHTGI Trigger: TATTCCAGTATGTGCCCATCACCCACCTCGACCTCC...CTGGCCCTTAAGCTCCCATCTGAAAACAAAGAGCAGACTGTGGACCTGTGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS-3UTR GCA 90 bp | TGCAACTGCCCATCCCTGCTTTACCAACAGGGAGCCATCTTCGGGCTATCCACATCTCCGCCAACCCAGTaGTGTTTTTACTGTGCGAAG | + |
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Preference number: 4 (lower is better) Translates to: CNCPSLLYQQGAIFGLSTSPPTQ*CFYCAK Trigger: CTTCGCACAGTAAAAACAGCACTGGGTTGGCGGAGA...TGTGGATAGCCCGAAGATGGCTCCCTGTTGGTAAAGCAGGGATGGGCAGTTGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS-3UTR CCA 90 bp | CACTCACAGGTCCACAGTCTGCTCTTTGTTTTCAGATGGGAGCTTAAGGGCCAGTGTCTAGGTAGGAGTTaGAGTGTGTCCCGGTCTCCG | + |
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Preference number: 4 (lower is better) Translates to: HSQVHSLLFVFRWELKGQCLGRS*SVSRSP Trigger: CGGAGACCGGGACACACTCCAACTCCTACCTAGACA...CTGGCCCTTAAGCTCCCATCTGAAAACAAAGAGCAGACTGTGGACCTGTGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS-3UTR CCA 90 bp | CACTCACAGGTCCACAGTCTGCTCTTTGTTTTCAGATGGGAGCTTAAGGGCCAGCTTTGTACCTCCATTTaGAACAGCCCCTGGGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: HSQVHSLLFVFRWELKGQLCTSI*NSPWGS Trigger: GCTACCCCAGGGGCTGTTCCAAATGGAGGTACAAAG...CTGGCCCTTAAGCTCCCATCTGAAAACAAAGAGCAGACTGTGGACCTGTGAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS-3UTR CCA 90 bp | CACTCACAGGTCCACAGTCTGCTCTTTGTTTTCAGATGGGAGCTTAAGGGCCAGAGATGGACACCCTGCTaGTGTCTAGGTAGGAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: HSQVHSLLFVFRWELKGQRWTPC*CLGRSW Trigger: CCAACTCCTACCTAGACACCAGCAGGGTGTCCATCT...CTGGCCCTTAAGCTCCCATCTGAAAACAAAGAGCAGACTGTGGACCTGTGAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS-3UTR CCA 90 bp | CTGTCTTTGACATACTTCTTGAGACTGGATGTGTGGTGGAATGCAAAGACCATCCCACGGAGGTCGAGGTaGGTGATGGGCACATACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSLTYFLRLDVWWNAKTIPRRSR*VMGTYW Trigger: CCAGTATGTGCCCATCACCCACCTCGACCTCCGTGG...GATGGTCTTTGCATTCCACCACACATCCAGTCTCAAGAAGTATGTCAAAGACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS-3UTR TCA 90 bp | TGCAACTGCCCATCCCTGCTTTACCAACAGGGAGCCATCTTCGGGCTATCCACACCAGATCCAACAGAATaGGGTTCTTGTAATCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: CNCPSLLYQQGAIFGLSTPDPTE*GSCNPQ Trigger: TTGTGGATTACAAGAACCTCATTCTGTTGGATCTGG...TGTGGATAGCCCGAAGATGGCTCCCTGTTGGTAAAGCAGGGATGGGCAGTTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS-3UTR GCA 90 bp | ACAGTCATCTTCCATTATCATTATGAAATGCAGCCCATAAGCAAAAGTATCAGGGGATGTGGTCACAGCTaGAGCCCCCGGGGCAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TVIFHYHYEMQPISKSIRGCGHS*SPRGRA Trigger: TGCCCTGCCCCGGGGGCTGCAGCTGTGACCACATCC...CCTGATACTTTTGCTTATGGGCTGCATTTCATAATGATAATGGAAGATGACTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS-3UTR GCA 90 bp | CCCTGCTTTACCAACAGGGAGCCATCTTCGGGCTATCCACAGGGGAAAAATAGAGTGCTGTTTTTACTGTaGGAAGTTAACGTGGGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: PCFTNREPSSGYPQGKNRVLFLL*EVNVGE Trigger: CTCGCCCACGTTAACTTCGCACAGTAAAAACAGCAC...TCTATTTTTCCCCTGTGGATAGCCCGAAGATGGCTCCCTGTTGGTAAAGCAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS-3UTR TCA 90 bp | TGCAACTGCCCATCCCTGCTTTACCAACAGGGAGCCATCTTCGGGCTATCCACAGTAATCCACAAAGTGTaGTTTTCGGATGCTATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: CNCPSLLYQQGAIFGLSTVIHKV*FSDAMD Trigger: ATCCATAGCATCCGAAAATCACACTTTGTGGATTAC...TGTGGATAGCCCGAAGATGGCTCCCTGTTGGTAAAGCAGGGATGGGCAGTTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS-3UTR GCA 90 bp | AAATCTATCCTAACATCTCCAATCTATCTGCTGCAGTGTGGGCAGCAACACAAAGGGCAGGGCAAGCCATaGACTGGGGGTTTGTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KSILTSPIYLLQCGQQHKGQGKP*TGGLFL Trigger: CAGAAACAAACCCCCAGTGCATGGCTTGCCCTGCCC...TTTGTGTTGCTGCCCACACTGCAGCAGATAGATTGGAGATGTTAGGATAGATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS-3UTR GCA 90 bp | CTGTCTTTGACATACTTCTTGAGACTGGATGTGTGGTGGAATGCAAAGACCATCCGGAGATGGACACCCTaGTGGTGTCTAGGTAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LSLTYFLRLDVWWNAKTIRRWTP*WCLGRS Trigger: ACTCCTACCTAGACACCAGCAGGGTGTCCATCTCCG...GATGGTCTTTGCATTCCACCACACATCCAGTCTCAAGAAGTATGTCAAAGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS-3UTR CCA 90 bp | AGTAAGTTTTCACGTGCTTCCTCGGTTCTTTGTTCCTACTTTATAAGTAAGACTCCTGAGCCTGGGATGTaGTCACAGCTGCAGCCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: SKFSRASSVLCSYFISKTPEPGM*SQLQPP Trigger: CGGGGGCTGCAGCTGTGACCACATCCCAGGCTCAGG...AGTCTTACTTATAAAGTAGGAACAAAGAACCGAGGAAGCACGTGAAAACTTACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS-3UTR GCA 90 bp | TTAAATCAAATCTATCCTAACATCTCCAATCTATCTGCTGCAGTGTGGGCAGCACTGCAGCCCCAGAAATaGCCCCGGAACGATCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: LNQIYPNISNLSAAVWAALQPQK*PRNDLM Trigger: CATGAGATCGTTCCGGGGGCATTTCTGGGGCTGCAG...TGCTGCCCACACTGCAGCAGATAGATTGGAGATGTTAGGATAGATTTGATTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS-3UTR CCA 90 bp | CCCTGCTTTACCAACAGGGAGCCATCTTCGGGCTATCCACAGGGGAAAAATAGACGATTAGGGCGTTTTTaGGAATGTTCTCTAGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: PCFTNREPSSGYPQGKNRRLGRF*ECSLAI Trigger: AATGGCTAGAGAACATTCCCAAAAACGCCCTAATCG...TCTATTTTTCCCCTGTGGATAGCCCGAAGATGGCTCCCTGTTGGTAAAGCAGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS-3UTR CCA 90 bp | ACAGTCATCTTCCATTATCATTATGAAATGCAGCCCATAAGCAAAAGTATCAGGGCGAAGGTTTCTTCCTaGGCAGGGGGAGCCGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TVIFHYHYEMQPISKSIRAKVSS*AGGAGR Trigger: TCTCCCGGCTCCCCCTGCCCAGGAAGAAACCTTCGC...CCTGATACTTTTGCTTATGGGCTGCATTTCATAATGATAATGGAAGATGACTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS-3UTR CCA 90 bp | CCCTGCTTTACCAACAGGGAGCCATCTTCGGGCTATCCACAGGGGAAAAATAGAAAATTAAAATCAGCCTaGAGGTATTCCAGATCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PCFTNREPSSGYPQGKNRKLKSA*RYSRSS Trigger: GGACGATCTGGAATACCTCCAGGCTGATTTTAATTT...TCTATTTTTCCCCTGTGGATAGCCCGAAGATGGCTCCCTGTTGGTAAAGCAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS-3UTR CCA 90 bp | CTGTCTTTGACATACTTCTTGAGACTGGATGTGTGGTGGAATGCAAAGACCATCTGTGCGAAGTTAACGTaGGCGAGATCCTCGCATACA | + |
|
Preference number: 4 (lower is better) Translates to: LSLTYFLRLDVWWNAKTICAKLT*ARSSHT Trigger: TGTATGCGAGGATCTCGCCCACGTTAACTTCGCACA...GATGGTCTTTGCATTCCACCACACATCCAGTCTCAAGAAGTATGTCAAAGACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| 3UTR CAA 72 bp | GTTTCAGTCTGTGGCCTCCTGTCTTTGACATACTTCTaGAGACTGGATGTGTGGTGGAATGCAAAGACCATC | + |
|
Preference number: 4 (lower is better) Translates to: VSVCGLLSLTYF*RLDVWWNAKTI Trigger: GATGGTCTTTGCATTCCACCACACATCCAGTCTCAAGAAGTATGTCAAAGACAGGAGGCCACAGACTGAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS-3UTR TCA 90 bp | AGTCAATTAAATCAAATCTATCCTAACATCTCCAATCTATCTGCTGCAGTGTGGCCTGCCCATTTGTCTTaGAAGGAGTTGGCAGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SQLNQIYPNISNLSAAVWPAHLS*KELAGG Trigger: GCCCCCTGCCAACTCCTTTCAAGACAAATGGGCAGG...CCACACTGCAGCAGATAGATTGGAGATGTTAGGATAGATTTGATTTAATTGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS-3UTR TCA 90 bp | TTAAATCAAATCTATCCTAACATCTCCAATCTATCTGCTGCAGTGTGGGCAGCACCAGGGAGAATGAGCTaGATCGCGTTGTACTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LNQIYPNISNLSAAVWAAPGRMS*IALYST Trigger: TGTGGAGTACAACGCGATTCAGCTCATTCTCCCTGG...TGCTGCCCACACTGCAGCAGATAGATTGGAGATGTTAGGATAGATTTGATTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS-3UTR TCA 90 bp | AGTAAGTTTTCACGTGCTTCCTCGGTTCTTTGTTCCTACTTTATAAGTAAGACTCCGGTGTCTCACACTTaGGGTCGCTCATCAGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: SKFSRASSVLCSYFISKTPVSHT*GRSSAP Trigger: AGGTGCTGATGAGCGACCTCAAGTGTGAGACACCGG...AGTCTTACTTATAAAGTAGGAACAAAGAACCGAGGAAGCACGTGAAAACTTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS-3UTR GCA 90 bp | AAATCTATCCTAACATCTCCAATCTATCTGCTGCAGTGTGGGCAGCAACACAAACGAAGGAAAAGCTCCTaGACGTTGGAAAGCTTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KSILTSPIYLLQCGQQHKRRKSS*TLESLG Trigger: GCCTAAGCTTTCCAACGTGCAGGAGCTTTTCCTTCG...TTTGTGTTGCTGCCCACACTGCAGCAGATAGATTGGAGATGTTAGGATAGATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS-3UTR GCA 90 bp | AGTAAGTTTTCACGTGCTTCCTCGGTTCTTTGTTCCTACTTTATAAGTAAGACTCTGGTCCAGCACCCCTaGCACAGGGAGGTACATGAA | + |
|
Preference number: 4 (lower is better) Translates to: SKFSRASSVLCSYFISKTLVQHP*HREVHE Trigger: TTCATGTACCTCCCTGTGGCAGGGGTGCTGGACCAG...AGTCTTACTTATAAAGTAGGAACAAAGAACCGAGGAAGCACGTGAAAACTTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS-3UTR CCA 90 bp | AAATCTATCCTAACATCTCCAATCTATCTGCTGCAGTGTGGGCAGCAACACAAAAACTTGTTCAAGTCCTaGAAGGCCCCCGGGTCTATA | + |
|
Preference number: 4 (lower is better) Translates to: KSILTSPIYLLQCGQQHKNLFKS*KAPGSI Trigger: TATAGACCCGGGGGCCTTCCAGGACTTGAACAAGTT...TTTGTGTTGCTGCCCACACTGCAGCAGATAGATTGGAGATGTTAGGATAGATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS-3UTR CCA 90 bp | AGTCAATTAAATCAAATCTATCCTAACATCTCCAATCTATCTGCTGCAGTGTGGTTGAGGTCTTTACCCTaGAGCCTGGTGGGGGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: SQLNQIYPNISNLSAAVWLRSLP*SLVGAS Trigger: CGAAGCCCCCACCAGGCTCCAGGGTAAAGACCTCAA...CCACACTGCAGCAGATAGATTGGAGATGTTAGGATAGATTTGATTTAATTGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS-3UTR CCA 90 bp | ACAGTCATCTTCCATTATCATTATGAAATGCAGCCCATAAGCAAAAGTATCAGGGGGCAAGCCATGCACTaGGGGTTTGTTTCTGGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: TVIFHYHYEMQPISKSIRGQAMH*GFVSGA Trigger: AGCGCCAGAAACAAACCCCCAGTGCATGGCTTGCCC...CCTGATACTTTTGCTTATGGGCTGCATTTCATAATGATAATGGAAGATGACTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS-3UTR CCA 90 bp | TTAAATCAAATCTATCCTAACATCTCCAATCTATCTGCTGCAGTGTGGGCAGCAATGATGGAGGTTAACTaGTCCAGCACCCCTGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LNQIYPNISNLSAAVWAAMMEVN*SSTPAT Trigger: TGTGGCAGGGGTGCTGGACCAGTTAACCTCCATCAT...TGCTGCCCACACTGCAGCAGATAGATTGGAGATGTTAGGATAGATTTGATTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS-3UTR CCA 90 bp | CTGTCTTTGACATACTTCTTGAGACTGGATGTGTGGTGGAATGCAAAGACCATCCCATGCAGGTCTATCTaGATGATGGAGGTTAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSLTYFLRLDVWWNAKTIPCRSI*MMEVNW Trigger: CCAGTTAACCTCCATCATCCAGATAGACCTGCATGG...GATGGTCTTTGCATTCCACCACACATCCAGTCTCAAGAAGTATGTCAAAGACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS-3UTR GCA 90 bp | TTAAATCAAATCTATCCTAACATCTCCAATCTATCTGCTGCAGTGTGGGCAGCAAGAGCAGATCACAGGTaGAGTCCCAAGGGTTATCCT | + |
|
Preference number: 4 (lower is better) Translates to: LNQIYPNISNLSAAVWAARADHR*SPKGYP Trigger: AGGATAACCCTTGGGACTGCACCTGTGATCTGCTCT...TGCTGCCCACACTGCAGCAGATAGATTGGAGATGTTAGGATAGATTTGATTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS-3UTR GCA 90 bp | CTGTCTTTGACATACTTCTTGAGACTGGATGTGTGGTGGAATGCAAAGACCATCGTAGCATGCTCATCCTaGCCATTTGTCTTGAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSLTYFLRLDVWWNAKTIVACSS*PFVLKG Trigger: TCCTTTCAAGACAAATGGGCAGGATGAGCATGCTAC...GATGGTCTTTGCATTCCACCACACATCCAGTCTCAAGAAGTATGTCAAAGACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS-3UTR GCA 90 bp | ACAGTCATCTTCCATTATCATTATGAAATGCAGCCCATAAGCAAAAGTATCAGGGGAGCCCAGACGTTCTaGCCATTGCTTGAAAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: TVIFHYHYEMQPISKSIRGAQTF*PLLERH Trigger: GTGCCTTTCAAGCAATGGGCAGAACGTCTGGGCTCC...CCTGATACTTTTGCTTATGGGCTGCATTTCATAATGATAATGGAAGATGACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS-3UTR TCA 90 bp | TTAAATCAAATCTATCCTAACATCTCCAATCTATCTGCTGCAGTGTGGGCAGCAAAGTACCAGGGAGAATaGGCTGAATCGCGTTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: LNQIYPNISNLSAAVWAAKYQGE*AESRCT Trigger: AGTACAACGCGATTCAGCTCATTCTCCCTGGTACTT...TGCTGCCCACACTGCAGCAGATAGATTGGAGATGTTAGGATAGATTTGATTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS-3UTR GCA 90 bp | TTAAATCAAATCTATCCTAACATCTCCAATCTATCTGCTGCAGTGTGGGCAGCATTGTTGTTGTTGATGTaGAGCCGTTTCACCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LNQIYPNISNLSAAVWAALLLLM*SRFTSC Trigger: GCAGCTGGTGAAACGGCTGCACATCAACAACAACAA...TGCTGCCCACACTGCAGCAGATAGATTGGAGATGTTAGGATAGATTTGATTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS-3UTR CCA 90 bp | ACAGTCATCTTCCATTATCATTATGAAATGCAGCCCATAAGCAAAAGTATCAGGATTTGGAACAGCCCCTaGGGTAGCATGCTCATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TVIFHYHYEMQPISKSIRIWNSP*GSMLIL Trigger: CAGGATGAGCATGCTACCCCAGGGGCTGTTCCAAAT...CCTGATACTTTTGCTTATGGGCTGCATTTCATAATGATAATGGAAGATGACTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS-3UTR CCA 90 bp | AGTCAATTAAATCAAATCTATCCTAACATCTCCAATCTATCTGCTGCAGTGTGGTGGCATCCCTTCTCTTaGACCGCTTTCGGTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SQLNQIYPNISNLSAAVWWHPFS*TAFGSS Trigger: TGAGGAACCGAAAGCGGTCCAAGAGAAGGGATGCCA...CCACACTGCAGCAGATAGATTGGAGATGTTAGGATAGATTTGATTTAATTGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| 3UTR CAA 72 bp | TTTAATTCTGCAGTTTCAGTCTGTGGCCTCCTGTCTTaGACATACTTCTTGAGACTGGATGTGTGGTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: FNSAVSVCGLLS*TYFLRLDVWWN Trigger: ATTCCACCACACATCCAGTCTCAAGAAGTATGTCAAAGACAGGAGGCCACAGACTGAAACTGCAGAATTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS-3UTR TCA 90 bp | ACAGTCATCTTCCATTATCATTATGAAATGCAGCCCATAAGCAAAAGTATCAGGGCAGGTCTATCTGGATaGTGGAGGTTAACTGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TVIFHYHYEMQPISKSIRAGLSG*WRLTGP Trigger: TGGACCAGTTAACCTCCATCATCCAGATAGACCTGC...CCTGATACTTTTGCTTATGGGCTGCATTTCATAATGATAATGGAAGATGACTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS-3UTR GCA 90 bp | ACAGTCATCTTCCATTATCATTATGAAATGCAGCCCATAAGCAAAAGTATCAGGCCTATGGGACCCATCTaGATTGTAAGGCCCATTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TVIFHYHYEMQPISKSIRPMGPI*IVRPIV Trigger: CACAATGGGCCTTACAATGCAGATGGGTCCCATAGG...CCTGATACTTTTGCTTATGGGCTGCATTTCATAATGATAATGGAAGATGACTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS-3UTR CCA 90 bp | TTAAATCAAATCTATCCTAACATCTCCAATCTATCTGCTGCAGTGTGGGCAGCAGTGATGGGCACATACTaGAATACATTAGCAGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: LNQIYPNISNLSAAVWAAVMGTY*NTLAGR Trigger: CCTACCTGCTAATGTATTCCAGTATGTGCCCATCAC...TGCTGCCCACACTGCAGCAGATAGATTGGAGATGTTAGGATAGATTTGATTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS-3UTR GCA 90 bp | AGTAAGTTTTCACGTGCTTCCTCGGTTCTTTGTTCCTACTTTATAAGTAAGACTTCAAATCAGCCAAGCTaGTCACGTTCCGGTTGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: SKFSRASSVLCSYFISKTSNQPS*SRSGCY Trigger: GTAACAACCGGAACGTGAGCAGCTTGGCTGATTTGA...AGTCTTACTTATAAAGTAGGAACAAAGAACCGAGGAAGCACGTGAAAACTTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS-3UTR GCA 90 bp | AGTCAATTAAATCAAATCTATCCTAACATCTCCAATCTATCTGCTGCAGTGTGGAGATACTCCAGGTTCTaGAGCCCAGCAAATTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SQLNQIYPNISNLSAAVWRYSRF*SPANFS Trigger: GGAGAAATTTGCTGGGCTGCAGAACCTGGAGTATCT...CCACACTGCAGCAGATAGATTGGAGATGTTAGGATAGATTTGATTTAATTGACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS-3UTR GCA 90 bp | ACAGTCATCTTCCATTATCATTATGAAATGCAGCCCATAAGCAAAAGTATCAGGAGACGTTCTGCCCATTaGTTGAAAGGCACAATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TVIFHYHYEMQPISKSIRRRSAH*LKGTMV Trigger: CACCATTGTGCCTTTCAAGCAATGGGCAGAACGTCT...CCTGATACTTTTGCTTATGGGCTGCATTTCATAATGATAATGGAAGATGACTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS-3UTR TCA 90 bp | AAATCTATCCTAACATCTCCAATCTATCTGCTGCAGTGTGGGCAGCAACACAAAGATTGTCGTTTAAAATaGGGACTTCCAACTTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KSILTSPIYLLQCGQQHKDCRLK*GLPTCS Trigger: TGAACAAGTTGGAAGTCCTCATTTTAAACGACAATC...TTTGTGTTGCTGCCCACACTGCAGCAGATAGATTGGAGATGTTAGGATAGATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS-3UTR TCA 90 bp | AGTCAATTAAATCAAATCTATCCTAACATCTCCAATCTATCTGCTGCAGTGTGGCCACAGGGAGGTACATaGAGTAATTATTGTGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SQLNQIYPNISNLSAAVWPQGGT*SNYCAD Trigger: GTCTGCACAATAATTACTTCATGTACCTCCCTGTGG...CCACACTGCAGCAGATAGATTGGAGATGTTAGGATAGATTTGATTTAATTGACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS-3UTR GCA 90 bp | ACAGTCATCTTCCATTATCATTATGAAATGCAGCCCATAAGCAAAAGTATCAGGCCCGGAACGATCTCATaGAAGCCATTGTTTTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: TVIFHYHYEMQPISKSIRPGTIS*KPLFSI Trigger: TATGGAAAACAATGGCTTGCATGAGATCGTTCCGGG...CCTGATACTTTTGCTTATGGGCTGCATTTCATAATGATAATGGAAGATGACTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS-3UTR CCA 90 bp | TTAAATCAAATCTATCCTAACATCTCCAATCTATCTGCTGCAGTGTGGGCAGCAGATTTTCGGATGCTATaGATCTTGTTATCTCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LNQIYPNISNLSAAVWAADFRML*ILLSRR Trigger: CCTTCGAGATAACAAGATCCATAGCATCCGAAAATC...TGCTGCCCACACTGCAGCAGATAGATTGGAGATGTTAGGATAGATTTGATTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS-3UTR GCA 90 bp | AGTCAATTAAATCAAATCTATCCTAACATCTCCAATCTATCTGCTGCAGTGTGGGTTGTTCTCTATGTTTaGGATGTTGTTGTTGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SQLNQIYPNISNLSAAVWVVLYV*DVVVAQ Trigger: CTGGGCAACAACAACATCGCAAACATAGAGAACAAC...CCACACTGCAGCAGATAGATTGGAGATGTTAGGATAGATTTGATTTAATTGACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS-3UTR GCA 90 bp | ACAGTCATCTTCCATTATCATTATGAAATGCAGCCCATAAGCAAAAGTATCAGGCCCCTTCTATCTCATTaGAAGAACAGATCTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TVIFHYHYEMQPISKSIRPLLSH*KNRSSL Trigger: AAGAGAAGATCTGTTCTTGCAATGAGATAGAAGGGG...CCTGATACTTTTGCTTATGGGCTGCATTTCATAATGATAATGGAAGATGACTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS-3UTR GCA 90 bp | AGTAAGTTTTCACGTGCTTCCTCGGTTCTTTGTTCCTACTTTATAAGTAAGACTAGTGTGATTTTCGGATaGTATGGATCTTGTTATCTC | + |
|
Preference number: 4 (lower is better) Translates to: SKFSRASSVLCSYFISKTSVIFG*YGSCYL Trigger: GAGATAACAAGATCCATAGCATCCGAAAATCACACT...AGTCTTACTTATAAAGTAGGAACAAAGAACCGAGGAAGCACGTGAAAACTTACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS GCA 90 bp | CGAACACCAGCAGCAGTCCCGGGACCAACACGGAGATGGACACCCTaGTGGTGTCTAGGTAGGAGTTGGAGTGTGTCCCGGTCTCCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: RTPAAVPGPTRRWTP*WCLGRSWSVSRSPP Trigger: TGGCGGAGACCGGGACACACTCCAACTCCTACCTAGACACCAGCAGGGTGTCCATCTCCGTGTTGGTCCCGGGACTGCTGCTGGTGTTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS CCA 90 bp | ACACCAGCAGCAGTCCCGGGACCAACACGGAGATGGACACCCTGCTaGTGTCTAGGTAGGAGTTGGAGTGTGTCCCGGTCTCCGCCAACC | + |
|
Preference number: 5 (lower is better) Translates to: TPAAVPGPTRRWTPC*CLGRSWSVSRSPPT Trigger: GGTTGGCGGAGACCGGGACACACTCCAACTCCTACCTAGACACCAGCAGGGTGTCCATCTCCGTGTTGGTCCCGGGACTGCTGCTGGTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS GCA 90 bp | GCAGGGCAAGCCATGCACTGGGGGTTTGTTTCTGGCGCTCCCAGTTaGTATCGGTGGCGTGGGTTTGATTTTGAGCTGCCAGTTGCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: AGQAMHWGFVSGAPS*YRWRGFDFELPVAR Trigger: CCGGGCAACTGGCAGCTCAAAATCAAACCCACGCCACCGATAGCAACTGGGAGCGCCAGAAACAAACCCCCAGTGCATGGCTTGCCCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS CCA 90 bp | ACGTTCCGGTTGTTACAGTTCATCTTTAAGCCTGAGCCTGGGATGTaGTCACAGCTGCAGCCCCCGGGGCAGGGCAAGCCATGCACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: TFRLLQFIFKPEPGM*SQLQPPGQGKPCTG Trigger: CCCAGTGCATGGCTTGCCCTGCCCCGGGGGCTGCAGCTGTGACCACATCCCAGGCTCAGGCTTAAAGATGAACTGTAACAACCGGAACGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS GCA 90 bp | TTGGAGTGTGTCCCGGTCTCCGCCAACCCAGTGCTGTTTTTACTGTaGGAAGTTAACGTGGGCGAGATCCTCGCATACAGCTGGGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LECVPVSANPVLFLL*EVNVGEILAYSWGQ Trigger: CTGCCCCCAGCTGTATGCGAGGATCTCGCCCACGTTAACTTCGCACAGTAAAAACAGCACTGGGTTGGCGGAGACCGGGACACACTCCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS CCA 90 bp | AAAGGACACAGGTCCTGTTCCGTGGTTTCATTGAGGTCTTTACCCTaGAGCCTGGTGGGGGCTTCGCAGACCACTCGACCGATTAGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: KGHRSCSVVSLRSLP*SLVGASQTTRPIRA Trigger: CGCCCTAATCGGTCGAGTGGTCTGCGAAGCCCCCACCAGGCTCCAGGGTAAAGACCTCAATGAAACCACGGAACAGGACCTGTGTCCTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS-3UTR CAA 90 bp | TGCAACTGCCCATCCCTGCTTTACCAACAGGGAGCCATCTTCGGGCTATCCACAGGCGTGGGTTTGATTTaGAGCTGCCAGTTGCCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: CNCPSLLYQQGAIFGLSTGVGLI*SCQLPG Trigger: CCCGGGCAACTGGCAGCTCAAAATCAAACCCACGCC...TGTGGATAGCCCGAAGATGGCTCCCTGTTGGTAAAGCAGGGATGGGCAGTTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS GCA 90 bp | CTGGCGCTCCCAGTTGCTATCGGTGGCGTGGGTTTGATTTTGAGCTaGCAGTTGCCCGGGATCTTTGTACCTCCATTTGGAACAGCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: LALPVAIGGVGLILS*QLPGIFVPPFGTAP Trigger: AGGGGCTGTTCCAAATGGAGGTACAAAGATCCCGGGCAACTGGCAGCTCAAAATCAAACCCACGCCACCGATAGCAACTGGGAGCGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS CCA 90 bp | GCCTGGTGGGGGCTTCGCAGACCACTCGACCGATTAGGGCGTTTTTaGGAATGTTCTCTAGCCATTCCTTCAGGGAGAGCAGATCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: AWWGLRRPLDRLGRF*ECSLAIPSGRADHR Trigger: CCTGTGATCTGCTCTCCCTGAAGGAATGGCTAGAGAACATTCCCAAAAACGCCCTAATCGGTCGAGTGGTCTGCGAAGCCCCCACCAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS CCA 90 bp | GCCATGCACTGGGGGTTTGTTTCTGGCGCTCCCAGTTGCTATCGGTaGCGTGGGTTTGATTTTGAGCTGCCAGTTGCCCGGGATCTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: AMHWGFVSGAPSCYR*RGFDFELPVARDLC Trigger: ACAAAGATCCCGGGCAACTGGCAGCTCAAAATCAAACCCACGCCACCGATAGCAACTGGGAGCGCCAGAAACAAACCCCCAGTGCATGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS CCA 90 bp | GGACCAACACGGAGATGGACACCCTGCTGGTGTCTAGGTAGGAGTTaGAGTGTGTCCCGGTCTCCGCCAACCCAGTGCTGTTTTTACTGT | + |
|
Preference number: 5 (lower is better) Translates to: GPTRRWTPCWCLGRS*SVSRSPPTQCCFYC Trigger: ACAGTAAAAACAGCACTGGGTTGGCGGAGACCGGGACACACTCCAACTCCTACCTAGACACCAGCAGGGTGTCCATCTCCGTGTTGGTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS GCA 90 bp | TGTCTAGGTAGGAGTTGGAGTGTGTCCCGGTCTCCGCCAACCCAGTaGTGTTTTTACTGTGCGAAGTTAACGTGGGCGAGATCCTCGCAT | + |
|
Preference number: 5 (lower is better) Translates to: CLGRSWSVSRSPPTQ*CFYCAKLTWARSSH Trigger: ATGCGAGGATCTCGCCCACGTTAACTTCGCACAGTAAAAACAGCACTGGGTTGGCGGAGACCGGGACACACTCCAACTCCTACCTAGACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS CCA 90 bp | CTGCCAGTTGCCCGGGATCTTTGTACCTCCATTTGGAACAGCCCCTaGGGTAGCATGCTCATCCTGCCCATTTGTCTTGAAAGGAGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LPVARDLCTSIWNSP*GSMLILPICLERSW Trigger: CCAACTCCTTTCAAGACAAATGGGCAGGATGAGCATGCTACCCCAGGGGCTGTTCCAAATGGAGGTACAAAGATCCCGGGCAACTGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS-3UTR CAA 90 bp | GCAGAGTCCCTGGAGCGTGTGGATTCCATGCGAGCCATGCAGCACTTTTGTTTGCGTTCTGCCCATTGCTaGAAAGGCACAATGGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: AESLERVDSMRAMQHFCLRSAHC*KGTMVQ Trigger: CTGCACCATTGTGCCTTTCAAGCAATGGGCAGAACG...CAAACAAAAGTGCTGCATGGCTCGCATGGAATCCACACGCTCCAGGGACTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS-3UTR CAA 90 bp | TGCAACTGCCCATCCCTGCTTTACCAACAGGGAGCCATCTTCGGGCTATCCACAGGGCAGATCTCCTCATaGGAGAGCAGCATGAAATCC | + |
|
Preference number: 5 (lower is better) Translates to: CNCPSLLYQQGAIFGLSTGQISS*ESSMKS Trigger: GGATTTCATGCTGCTCTCCAATGAGGAGATCTGCCC...TGTGGATAGCCCGAAGATGGCTCCCTGTTGGTAAAGCAGGGATGGGCAGTTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS-3UTR CAA 90 bp | TGCAACTGCCCATCCCTGCTTTACCAACAGGGAGCCATCTTCGGGCTATCCACATGTTCCGTGGTTTCATaGAGGTCTTTACCCTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: CNCPSLLYQQGAIFGLSTCSVVS*RSLPWS Trigger: GCTCCAGGGTAAAGACCTCAATGAAACCACGGAACA...TGTGGATAGCCCGAAGATGGCTCCCTGTTGGTAAAGCAGGGATGGGCAGTTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS-3UTR CAA 90 bp | GCAGAGTCCCTGGAGCGTGTGGATTCCATGCGAGCCATGCAGCACTTTTGTTTGCAGACGTTCTGCCCATaGCTTGAAAGGCACAATGGT | + |
|
Preference number: 5 (lower is better) Translates to: AESLERVDSMRAMQHFCLQTFCP*LERHNG Trigger: ACCATTGTGCCTTTCAAGCAATGGGCAGAACGTCTG...CAAACAAAAGTGCTGCATGGCTCGCATGGAATCCACACGCTCCAGGGACTCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS-3UTR CAA 90 bp | CCCTGCTTTACCAACAGGGAGCCATCTTCGGGCTATCCACAGGGGAAAAATAGATTGGCATCCCTTCTCTaGGACCGCTTTCGGTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: PCFTNREPSSGYPQGKNRLASLL*DRFRFL Trigger: GAGGAACCGAAAGCGGTCCAAGAGAAGGGATGCCAA...TCTATTTTTCCCCTGTGGATAGCCCGAAGATGGCTCCCTGTTGGTAAAGCAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS GCA 90 bp | AAAGACTTGATCTTGTTGTTGTTGATGTGCAGCCGTTTCACCAGCTaGAGCCCCAGAAATGCCCCCGGAACGATCTCATGCAAGCCATTG | + |
|
Preference number: 5 (lower is better) Translates to: KDLILLLLMCSRFTS*SPRNAPGTISCKPL Trigger: CAATGGCTTGCATGAGATCGTTCCGGGGGCATTTCTGGGGCTGCAGCTGGTGAAACGGCTGCACATCAACAACAACAAGATCAAGTCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS-3UTR CAA 90 bp | TGCAACTGCCCATCCCTGCTTTACCAACAGGGAGCCATCTTCGGGCTATCCACATCCCCTTCTATCTCATaGCAAGAACAGATCTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: CNCPSLLYQQGAIFGLSTSPSIS*QEQIFS Trigger: AGAGAAGATCTGTTCTTGCAATGAGATAGAAGGGGA...TGTGGATAGCCCGAAGATGGCTCCCTGTTGGTAAAGCAGGGATGGGCAGTTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS TCA 90 bp | ATCCTCAGTTTCGGCATGGCATTGAAAGTACCAGGGAGAATGAGCTaGATCGCGTTGTACTCCACATTCAGATACTCCAGGTTCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ILSFGMALKVPGRMS*IALYSTFRYSRFCS Trigger: GCTGCAGAACCTGGAGTATCTGAATGTGGAGTACAACGCGATTCAGCTCATTCTCCCTGGTACTTTCAATGCCATGCCGAAACTGAGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS CCA 90 bp | TTCAGCCTGTTTCCACGGAGGTCGAGGTGGGTGATGGGCACATACTaGAATACATTAGCAGGTAGGGTGCTGATGAGATTGTCGTTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: FSLFPRRSRWVMGTY*NTLAGRVLMRLSFK Trigger: TTTAAACGACAATCTCATCAGCACCCTACCTGCTAATGTATTCCAGTATGTGCCCATCACCCACCTCGACCTCCGTGGAAACAGGCTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS-3UTR CAA 90 bp | CACTCACAGGTCCACAGTCTGCTCTTTGTTTTCAGATGGGAGCTTAAGGGCCAGCTGCTCACGTTCCGGTaGTTACAGTTCATCTTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: HSQVHSLLFVFRWELKGQLLTFR*LQFIFK Trigger: CTTAAAGATGAACTGTAACAACCGGAACGTGAGCAG...CTGGCCCTTAAGCTCCCATCTGAAAACAAAGAGCAGACTGTGGACCTGTGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS-3UTR CAA 90 bp | CACTCACAGGTCCACAGTCTGCTCTTTGTTTTCAGATGGGAGCTTAAGGGCCAGAAAAGCTCCTGCACGTaGGAAAGCTTAGGCTTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: HSQVHSLLFVFRWELKGQKSSCT*ESLGFK Trigger: TTTGAAGCCTAAGCTTTCCAACGTGCAGGAGCTTTT...CTGGCCCTTAAGCTCCCATCTGAAAACAAAGAGCAGACTGTGGACCTGTGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS-3UTR CAA 90 bp | CCCTGCTTTACCAACAGGGAGCCATCTTCGGGCTATCCACAGGGGAAAAATAGAAAAGACTTGATCTTGTaGTTGTTGATGTGCAGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: PCFTNREPSSGYPQGKNRKDLIL*LLMCSR Trigger: ACGGCTGCACATCAACAACAACAAGATCAAGTCTTT...TCTATTTTTCCCCTGTGGATAGCCCGAAGATGGCTCCCTGTTGGTAAAGCAGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS-3UTR CAA 90 bp | CACTCACAGGTCCACAGTCTGCTCTTTGTTTTCAGATGGGAGCTTAAGGGCCAGCGAAAAGACTTGATCTaGTTGTTGTTGATGTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: HSQVHSLLFVFRWELKGQRKDLI*LLLMCS Trigger: GCTGCACATCAACAACAACAAGATCAAGTCTTTTCG...CTGGCCCTTAAGCTCCCATCTGAAAACAAAGAGCAGACTGTGGACCTGTGAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS-3UTR CAA 90 bp | CTGTCTTTGACATACTTCTTGAGACTGGATGTGTGGTGGAATGCAAAGACCATCATCGGTGGCGTGGGTTaGATTTTGAGCTGCCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LSLTYFLRLDVWWNAKTIIGGVG*ILSCQL Trigger: CAACTGGCAGCTCAAAATCAAACCCACGCCACCGAT...GATGGTCTTTGCATTCCACCACACATCCAGTCTCAAGAAGTATGTCAAAGACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS-3UTR CAA 90 bp | CACTCACAGGTCCACAGTCTGCTCTTTGTTTTCAGATGGGAGCTTAAGGGCCAGTGTTGTTCTCTATGTTaGCGATGTTGTTGTTGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: HSQVHSLLFVFRWELKGQCCSLC*RCCCCP Trigger: TGGGCAACAACAACATCGCAAACATAGAGAACAACA...CTGGCCCTTAAGCTCCCATCTGAAAACAAAGAGCAGACTGTGGACCTGTGAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS GCA 90 bp | GATTTTCGGATGCTATGGATCTTGTTATCTCGAAGGAAAAGCTCCTaGACGTTGGAAAGCTTAGGCTTCAAATCAGCCAAGCTGCTCACG | + |
|
Preference number: 5 (lower is better) Translates to: DFRMLWILLSRRKSS*TLESLGFKSAKLLT Trigger: CGTGAGCAGCTTGGCTGATTTGAAGCCTAAGCTTTCCAACGTGCAGGAGCTTTTCCTTCGAGATAACAAGATCCATAGCATCCGAAAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS-3UTR CAA 90 bp | ACAGTCATCTTCCATTATCATTATGAAATGCAGCCCATAAGCAAAAGTATCAGGGAGCACTCCCAGGGGTaGCCATGCAGGTCTATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TVIFHYHYEMQPISKSIREHSQG*PCRSIW Trigger: CCAGATAGACCTGCATGGCAACCCCTGGGAGTGCTC...CCTGATACTTTTGCTTATGGGCTGCATTTCATAATGATAATGGAAGATGACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS-3UTR CAA 90 bp | CACTCACAGGTCCACAGTCTGCTCTTTGTTTTCAGATGGGAGCTTAAGGGCCAGTGCTTTCGAAAAGACTaGATCTTGTTGTTGTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: HSQVHSLLFVFRWELKGQCFRKD*ILLLLM Trigger: CATCAACAACAACAAGATCAAGTCTTTTCGAAAGCA...CTGGCCCTTAAGCTCCCATCTGAAAACAAAGAGCAGACTGTGGACCTGTGAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS-3UTR CAA 90 bp | CTGTCTTTGACATACTTCTTGAGACTGGATGTGTGGTGGAATGCAAAGACCATCCCGATTAGGGCGTTTTaGGGAATGTTCTCTAGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LSLTYFLRLDVWWNAKTIPIRAF*GMFSSH Trigger: ATGGCTAGAGAACATTCCCAAAAACGCCCTAATCGG...GATGGTCTTTGCATTCCACCACACATCCAGTCTCAAGAAGTATGTCAAAGACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS-3UTR CAA 90 bp | AAATCTATCCTAACATCTCCAATCTATCTGCTGCAGTGTGGGCAGCAACACAAAATTTTGAGCTGCCAGTaGCCCGGGATCTTTGTACCT | + |
|
Preference number: 5 (lower is better) Translates to: KSILTSPIYLLQCGQQHKILSCQ*PGIFVP Trigger: AGGTACAAAGATCCCGGGCAACTGGCAGCTCAAAAT...TTTGTGTTGCTGCCCACACTGCAGCAGATAGATTGGAGATGTTAGGATAGATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS-3UTR CAA 90 bp | CTGTCTTTGACATACTTCTTGAGACTGGATGTGTGGTGGAATGCAAAGACCATCAGTTTCGGCATGGCATaGAAAGTACCAGGGAGAATG | + |
|
Preference number: 5 (lower is better) Translates to: LSLTYFLRLDVWWNAKTISFGMA*KVPGRM Trigger: CATTCTCCCTGGTACTTTCAATGCCATGCCGAAACT...GATGGTCTTTGCATTCCACCACACATCCAGTCTCAAGAAGTATGTCAAAGACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS-3UTR CAA 90 bp | AGTCAATTAAATCAAATCTATCCTAACATCTCCAATCTATCTGCTGCAGTGTGGACCGGTGTCTCACACTaGAGGTCGCTCATCAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: SQLNQIYPNISNLSAAVWTGVSH*RSLIST Trigger: GGTGCTGATGAGCGACCTCAAGTGTGAGACACCGGT...CCACACTGCAGCAGATAGATTGGAGATGTTAGGATAGATTTGATTTAATTGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS-3UTR CAA 90 bp | TTAAATCAAATCTATCCTAACATCTCCAATCTATCTGCTGCAGTGTGGGCAGCAATGAGGACTTCCAACTaGTTCAAGTCCTGGAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LNQIYPNISNLSAAVWAAMRTSN*FKSWKA Trigger: GGCCTTCCAGGACTTGAACAAGTTGGAAGTCCTCAT...TGCTGCCCACACTGCAGCAGATAGATTGGAGATGTTAGGATAGATTTGATTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS-3UTR CAA 90 bp | ACAGTCATCTTCCATTATCATTATGAAATGCAGCCCATAAGCAAAAGTATCAGGTCCTGCCCATTTGTCTaGAAAGGAGTTGGCAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: TVIFHYHYEMQPISKSIRSCPFV*KGVGRG Trigger: CCCCCTGCCAACTCCTTTCAAGACAAATGGGCAGGA...CCTGATACTTTTGCTTATGGGCTGCATTTCATAATGATAATGGAAGATGACTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS-3UTR CAA 90 bp | AGTAAGTTTTCACGTGCTTCCTCGGTTCTTTGTTCCTACTTTATAAGTAAGACTTCGGACGCAGAGGAATaGGCATCCCTTCTCTTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SKFSRASSVLCSYFISKTSDAEE*ASLLLD Trigger: GTCCAAGAGAAGGGATGCCAATTCCTCTGCGTCCGA...AGTCTTACTTATAAAGTAGGAACAAAGAACCGAGGAAGCACGTGAAAACTTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS-3UTR CAA 90 bp | CTGTCTTTGACATACTTCTTGAGACTGGATGTGTGGTGGAATGCAAAGACCATCAGGGTGCTGATGAGATaGTCGTTTAAAATGAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: LSLTYFLRLDVWWNAKTIRVLMR*SFKMRT Trigger: AGTCCTCATTTTAAACGACAATCTCATCAGCACCCT...GATGGTCTTTGCATTCCACCACACATCCAGTCTCAAGAAGTATGTCAAAGACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS TCA 90 bp | GTTGCCCAGATCCAACAGAATGAGGTTCTTGTAATCCACAAAGTGTaGTTTTCGGATGCTATGGATCTTGTTATCTCGAAGGAAAAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VAQIQQNEVLVIHKV*FSDAMDLVISKEKL Trigger: GAGCTTTTCCTTCGAGATAACAAGATCCATAGCATCCGAAAATCACACTTTGTGGATTACAAGAACCTCATTCTGTTGGATCTGGGCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS-3UTR CAA 90 bp | TTAAATCAAATCTATCCTAACATCTCCAATCTATCTGCTGCAGTGTGGGCAGCATTGATCTTGTTGTTGTaGATGTGCAGCCGTTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: LNQIYPNISNLSAAVWAALILLL*MCSRFT Trigger: GGTGAAACGGCTGCACATCAACAACAACAAGATCAA...TGCTGCCCACACTGCAGCAGATAGATTGGAGATGTTAGGATAGATTTGATTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS-3UTR CAA 90 bp | TTAAATCAAATCTATCCTAACATCTCCAATCTATCTGCTGCAGTGTGGGCAGCATCTATGTTTGCGATGTaGTTGTTGCCCAGATCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: LNQIYPNISNLSAAVWAASMFAM*LLPRSN Trigger: GTTGGATCTGGGCAACAACAACATCGCAAACATAGA...TGCTGCCCACACTGCAGCAGATAGATTGGAGATGTTAGGATAGATTTGATTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS-3UTR CAA 90 bp | AAATCTATCCTAACATCTCCAATCTATCTGCTGCAGTGTGGGCAGCAACACAAAAGGGACCTCAGCAAGTaGTTGTTGAGAATAAGAATC | + |
|
Preference number: 5 (lower is better) Translates to: KSILTSPIYLLQCGQQHKRDLSK*LLRIRI Trigger: GATTCTTATTCTCAACAACAACTTGCTGAGGTCCCT...TTTGTGTTGCTGCCCACACTGCAGCAGATAGATTGGAGATGTTAGGATAGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS-3UTR CAA 90 bp | AAATCTATCCTAACATCTCCAATCTATCTGCTGCAGTGTGGGCAGCAACACAAACTCAGCAAGTTGTTGTaGAGAATAAGAATCCTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: KSILTSPIYLLQCGQQHKLSKLL*RIRILS Trigger: ACTGAGGATTCTTATTCTCAACAACAACTTGCTGAG...TTTGTGTTGCTGCCCACACTGCAGCAGATAGATTGGAGATGTTAGGATAGATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS-3UTR CAA 90 bp | AGTAAGTTTTCACGTGCTTCCTCGGTTCTTTGTTCCTACTTTATAAGTAAGACTAGTCGAGTGAGGGAATaGCCATGCAGAAATAAATGG | + |
|
Preference number: 5 (lower is better) Translates to: SKFSRASSVLCSYFISKTSRVRE*PCRNKW Trigger: CCATTTATTTCTGCATGGCAATTCCCTCACTCGACT...AGTCTTACTTATAAAGTAGGAACAAAGAACCGAGGAAGCACGTGAAAACTTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS-3UTR CAA 90 bp | AGTAAGTTTTCACGTGCTTCCTCGGTTCTTTGTTCCTACTTTATAAGTAAGACTTTTGCGATGTTGTTGTaGCCCAGATCCAACAGAATG | + |
|
Preference number: 5 (lower is better) Translates to: SKFSRASSVLCSYFISKTFAMLL*PRSNRM Trigger: CATTCTGTTGGATCTGGGCAACAACAACATCGCAAA...AGTCTTACTTATAAAGTAGGAACAAAGAACCGAGGAAGCACGTGAAAACTTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS-3UTR CAA 90 bp | AGTAAGTTTTCACGTGCTTCCTCGGTTCTTTGTTCCTACTTTATAAGTAAGACTATGTTTGCGATGTTGTaGTTGCCCAGATCCAACAGA | + |
|
Preference number: 5 (lower is better) Translates to: SKFSRASSVLCSYFISKTMFAML*LPRSNR Trigger: TCTGTTGGATCTGGGCAACAACAACATCGCAAACAT...AGTCTTACTTATAAAGTAGGAACAAAGAACCGAGGAAGCACGTGAAAACTTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS-3UTR CAA 90 bp | AGTCAATTAAATCAAATCTATCCTAACATCTCCAATCTATCTGCTGCAGTGTGGAGGTTCTTGAAAGTGTaGTTCTCTATGTTTGCGATG | + |
|
Preference number: 5 (lower is better) Translates to: SQLNQIYPNISNLSAAVWRFLKV*FSMFAM Trigger: CATCGCAAACATAGAGAACAACACTTTCAAGAACCT...CCACACTGCAGCAGATAGATTGGAGATGTTAGGATAGATTTGATTTAATTGACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS-3UTR CAA 90 bp | AGTCAATTAAATCAAATCTATCCTAACATCTCCAATCTATCTGCTGCAGTGTGGAGGTCCAAAAGGTTCTaGAAAGTGTTGTTCTCTATG | + |
|
Preference number: 5 (lower is better) Translates to: SQLNQIYPNISNLSAAVWRSKRF*KVLFSM Trigger: CATAGAGAACAACACTTTCAAGAACCTTTTGGACCT...CCACACTGCAGCAGATAGATTGGAGATGTTAGGATAGATTTGATTTAATTGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS GCA 72 bp | TCATCTTTAAGCCTGAGCCTGGGATGTGGTCACAGCTaGAGCCCCCGGGGCAGGGCAAGCCATGCACTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SSLSLSLGCGHS*SPRGRASHALG Trigger: CCCCAGTGCATGGCTTGCCCTGCCCCGGGGGCTGCAGCTGTGACCACATCCCAGGCTCAGGCTTAAAGATGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS CCA 72 bp | GGAGTTGGCAGGGGGCCAGGAGCGAAGGTTTCTTCCTaGGCAGGGGGAGCCGGGAGACTAGAATCCACTCTG | + |
|
Preference number: 6 (lower is better) Translates to: GVGRGPGAKVSS*AGGAGRLESTL Trigger: CAGAGTGGATTCTAGTCTCCCGGCTCCCCCTGCCCAGGAAGAAACCTTCGCTCCTGGCCCCCTGCCAACTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS CCA 72 bp | CGGAGATGGACACCCTGCTGGTGTCTAGGTAGGAGTTaGAGTGTGTCCCGGTCTCCGCCAACCCAGTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: RRWTPCWCLGRS*SVSRSPPTQCC Trigger: ACAGCACTGGGTTGGCGGAGACCGGGACACACTCCAACTCCTACCTAGACACCAGCAGGGTGTCCATCTCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS CCA 72 bp | GCAGTCCCGGGACCAACACGGAGATGGACACCCTGCTaGTGTCTAGGTAGGAGTTGGAGTGTGTCCCGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: AVPGPTRRWTPC*CLGRSWSVSRS Trigger: AGACCGGGACACACTCCAACTCCTACCTAGACACCAGCAGGGTGTCCATCTCCGTGTTGGTCCCGGGACTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS CCA 72 bp | AGGTCCTGTTCCGTGGTTTCATTGAGGTCTTTACCCTaGAGCCTGGTGGGGGCTTCGCAGACCACTCGACCG | + |
|
Preference number: 6 (lower is better) Translates to: RSCSVVSLRSLP*SLVGASQTTRP Trigger: CGGTCGAGTGGTCTGCGAAGCCCCCACCAGGCTCCAGGGTAAAGACCTCAATGAAACCACGGAACAGGACCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS CCA 72 bp | GAGCTGCCAGTTGCCCGGGATCTTTGTACCTCCATTTaGAACAGCCCCTGGGGTAGCATGCTCATCCTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: ELPVARDLCTSI*NSPWGSMLILP Trigger: GGGCAGGATGAGCATGCTACCCCAGGGGCTGTTCCAAATGGAGGTACAAAGATCCCGGGCAACTGGCAGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS CCA 72 bp | CGAACACCAGCAGCAGTCCCGGGACCAACACGGAGATaGACACCCTGCTGGTGTCTAGGTAGGAGTTGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: RTPAAVPGPTRR*TPCWCLGRSWS Trigger: ACTCCAACTCCTACCTAGACACCAGCAGGGTGTCCATCTCCGTGTTGGTCCCGGGACTGCTGCTGGTGTTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS GCA 72 bp | GAGGTCGCTCATCAGCACCTCGGAGCCCAGACGTTCTaGCCATTGCTTGAAAGGCACAATGGTGCAGGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: EVAHQHLGAQTF*PLLERHNGAGA Trigger: TGCTCCTGCACCATTGTGCCTTTCAAGCAATGGGCAGAACGTCTGGGCTCCGAGGTGCTGATGAGCGACCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS CCA 72 bp | TGGGGGTTTGTTTCTGGCGCTCCCAGTTGCTATCGGTaGCGTGGGTTTGATTTTGAGCTGCCAGTTGCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: WGFVSGAPSCYR*RGFDFELPVAR Trigger: CCGGGCAACTGGCAGCTCAAAATCAAACCCACGCCACCGATAGCAACTGGGAGCGCCAGAAACAAACCCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS GCA 72 bp | GTCCCGGTCTCCGCCAACCCAGTGCTGTTTTTACTGTaGGAAGTTAACGTGGGCGAGATCCTCGCATACAGC | + |
|
Preference number: 6 (lower is better) Translates to: VPVSANPVLFLL*EVNVGEILAYS Trigger: GCTGTATGCGAGGATCTCGCCCACGTTAACTTCGCACAGTAAAAACAGCACTGGGTTGGCGGAGACCGGGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS CAA 72 bp | GCGCTCCCAGTTGCTATCGGTGGCGTGGGTTTGATTTaGAGCTGCCAGTTGCCCGGGATCTTTGTACCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: ALPVAIGGVGLI*SCQLPGIFVPP Trigger: TGGAGGTACAAAGATCCCGGGCAACTGGCAGCTCAAAATCAAACCCACGCCACCGATAGCAACTGGGAGCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS CAA 90 bp | AGCCTGGTGGGGGCTTCGCAGACCACTCGACCGATTAGGGCGTTTTaGGGAATGTTCTCTAGCCATTCCTTCAGGGAGAGCAGATCACAG | + |
|
Preference number: 6 (lower is better) Translates to: SLVGASQTTRPIRAF*GMFSSHSFRESRSQ Trigger: CTGTGATCTGCTCTCCCTGAAGGAATGGCTAGAGAACATTCCCAAAAACGCCCTAATCGGTCGAGTGGTCTGCGAAGCCCCCACCAGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS GCA 72 bp | AGTCCCAAGGGTTATCCTCTAGCAGGATCTCGGCAATaGCAGGGATCTGCTCCAAGACCTCCTCATAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SPKGYPLAGSRQ*QGSAPRPPHRA Trigger: TGCCCTATGAGGAGGTCTTGGAGCAGATCCCTGGCATTGCCGAGATCCTGCTAGAGGATAACCCTTGGGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS GCA 72 bp | AGGAGTTGGAGTGTGTCCCGGTCTCCGCCAACCCAGTaGTGTTTTTACTGTGCGAAGTTAACGTGGGCGAGA | + |
|
Preference number: 6 (lower is better) Translates to: RSWSVSRSPPTQ*CFYCAKLTWAR Trigger: TCTCGCCCACGTTAACTTCGCACAGTAAAAACAGCACTGGGTTGGCGGAGACCGGGACACACTCCAACTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS CAA 90 bp | GGGGGTTTGTTTCTGGCGCTCCCAGTTGCTATCGGTGGCGTGGGTTaGATTTTGAGCTGCCAGTTGCCCGGGATCTTTGTACCTCCATTT | + |
|
Preference number: 6 (lower is better) Translates to: GGLFLALPVAIGGVG*ILSCQLPGIFVPPF Trigger: AAATGGAGGTACAAAGATCCCGGGCAACTGGCAGCTCAAAATCAAACCCACGCCACCGATAGCAACTGGGAGCGCCAGAAACAAACCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS GCA 72 bp | ATCTTGTTGTTGTTGATGTGCAGCCGTTTCACCAGCTaGAGCCCCAGAAATGCCCCCGGAACGATCTCATGC | + |
|
Preference number: 6 (lower is better) Translates to: ILLLLMCSRFTS*SPRNAPGTISC Trigger: GCATGAGATCGTTCCGGGGGCATTTCTGGGGCTGCAGCTGGTGAAACGGCTGCACATCAACAACAACAAGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS CCA 72 bp | GCCCGGGATCTTTGTACCTCCATTTGGAACAGCCCCTaGGGTAGCATGCTCATCCTGCCCATTTGTCTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: ARDLCTSIWNSP*GSMLILPICLE Trigger: TTCAAGACAAATGGGCAGGATGAGCATGCTACCCCAGGGGCTGTTCCAAATGGAGGTACAAAGATCCCGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS CCA 72 bp | CCAACCCAGTGCTGTTTTTACTGTGCGAAGTTAACGTaGGCGAGATCCTCGCATACAGCTGGGGGCAGATCT | + |
|
Preference number: 6 (lower is better) Translates to: PTQCCFYCAKLT*ARSSHTAGGRS Trigger: AGATCTGCCCCCAGCTGTATGCGAGGATCTCGCCCACGTTAACTTCGCACAGTAAAAACAGCACTGGGTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS CAA 72 bp | GCTATCGGTGGCGTGGGTTTGATTTTGAGCTGCCAGTaGCCCGGGATCTTTGTACCTCCATTTGGAACAGCC | + |
|
Preference number: 6 (lower is better) Translates to: AIGGVGLILSCQ*PGIFVPPFGTA Trigger: GGCTGTTCCAAATGGAGGTACAAAGATCCCGGGCAACTGGCAGCTCAAAATCAAACCCACGCCACCGATAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS CAA 72 bp | TTTCTGGCGCTCCCAGTTGCTATCGGTGGCGTGGGTTaGATTTTGAGCTGCCAGTTGCCCGGGATCTTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: FLALPVAIGGVG*ILSCQLPGIFV Trigger: TACAAAGATCCCGGGCAACTGGCAGCTCAAAATCAAACCCACGCCACCGATAGCAACTGGGAGCGCCAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS TCA 72 bp | TTTTTAAAGGACACAGGTCCTGTTCCGTGGTTTCATTaGGGTCTTTACCCTGGAGCCTGGTGGGGGCTTCGC | + |
|
Preference number: 6 (lower is better) Translates to: FLKDTGPVPWFH*GLYPGAWWGLR Trigger: GCGAAGCCCCCACCAGGCTCCAGGGTAAAGACCTCAATGAAACCACGGAACAGGACCTGTGTCCTTTAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS GCA 72 bp | CCAGTTGCTATCGGTGGCGTGGGTTTGATTTTGAGCTaGCAGTTGCCCGGGATCTTTGTACCTCCATTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: PVAIGGVGLILS*QLPGIFVPPFG Trigger: TCCAAATGGAGGTACAAAGATCCCGGGCAACTGGCAGCTCAAAATCAAACCCACGCCACCGATAGCAACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS GCA 72 bp | ATCGCGTTGTACTCCACATTCAGATACTCCAGGTTCTaGAGCCCAGCAAATTTCTCCCGGGACAGAGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: IALYSTFRYSRF*SPANFSRDRVS Trigger: GGACACTCTGTCCCGGGAGAAATTTGCTGGGCTGCAGAACCTGGAGTATCTGAATGTGGAGTACAACGCGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS CCA 72 bp | GGCAGTGTTTTCAGCCTGTTTCCACGGAGGTCGAGGTaGGTGATGGGCACATACTGGAATACATTAGCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: GSVFSLFPRRSR*VMGTYWNTLAG Trigger: ACCTGCTAATGTATTCCAGTATGTGCCCATCACCCACCTCGACCTCCGTGGAAACAGGCTGAAAACACTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS CAA 72 bp | AAATCCTTCCTAAAGAAGTTCACCGGTGTCTCACACTaGAGGTCGCTCATCAGCACCTCGGAGCCCAGACGT | + |
|
Preference number: 6 (lower is better) Translates to: KSFLKKFTGVSH*RSLISTSEPRR Trigger: ACGTCTGGGCTCCGAGGTGCTGATGAGCGACCTCAAGTGTGAGACACCGGTGAACTTCTTTAGGAAGGATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS CAA 90 bp | TTGTTTCTGGCGCTCCCAGTTGCTATCGGTGGCGTGGGTTTGATTTaGAGCTGCCAGTTGCCCGGGATCTTTGTACCTCCATTTGGAACA | + |
|
Preference number: 6 (lower is better) Translates to: LFLALPVAIGGVGLI*SCQLPGIFVPPFGT Trigger: TGTTCCAAATGGAGGTACAAAGATCCCGGGCAACTGGCAGCTCAAAATCAAACCCACGCCACCGATAGCAACTGGGAGCGCCAGAAACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS CAA 90 bp | TGTAGGGAATTAATTTCGGACGCAGAGGAATTGGCATCCCTTCTCTaGGACCGCTTTCGGTTCCTCAGGATAAACACGAGCATGCCCACC | + |
|
Preference number: 6 (lower is better) Translates to: CRELISDAEELASLL*DRFRFLRINTSMPT Trigger: GGTGGGCATGCTCGTGTTTATCCTGAGGAACCGAAAGCGGTCCAAGAGAAGGGATGCCAATTCCTCTGCGTCCGAAATTAATTCCCTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS GCA 72 bp | TTTGTACCTCCATTTGGAACAGCCCCTGGGGTAGCATaGTCATCCTGCCCATTTGTCTTGAAAGGAGTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: FVPPFGTAPGVA*SSCPFVLKGVG Trigger: GCCAACTCCTTTCAAGACAAATGGGCAGGATGAGCATGCTACCCCAGGGGCTGTTCCAAATGGAGGTACAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS CCA 72 bp | TTTCCACGGAGGTCGAGGTGGGTGATGGGCACATACTaGAATACATTAGCAGGTAGGGTGCTGATGAGATTG | + |
|
Preference number: 6 (lower is better) Translates to: FPRRSRWVMGTY*NTLAGRVLMRL Trigger: CAATCTCATCAGCACCCTACCTGCTAATGTATTCCAGTATGTGCCCATCACCCACCTCGACCTCCGTGGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS CAA 90 bp | CGGATGCTATGGATCTTGTTATCTCGAAGGAAAAGCTCCTGCACGTaGGAAAGCTTAGGCTTCAAATCAGCCAAGCTGCTCACGTTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: RMLWILLSRRKSSCT*ESLGFKSAKLLTFR Trigger: CCGGAACGTGAGCAGCTTGGCTGATTTGAAGCCTAAGCTTTCCAACGTGCAGGAGCTTTTCCTTCGAGATAACAAGATCCATAGCATCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS CAA 90 bp | AGGGAGACCCCAGCAAAGACGTCCACCGGTAGGGACCTCAGCAAGTaGTTGTTGAGAATAAGAATCCTCAGTTTCGGCATGGCATTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: RETPAKTSTGRDLSK*LLRIRILSFGMALK Trigger: TTTCAATGCCATGCCGAAACTGAGGATTCTTATTCTCAACAACAACTTGCTGAGGTCCCTACCGGTGGACGTCTTTGCTGGGGTCTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS CAA 72 bp | GCAAAGACGTCCACCGGTAGGGACCTCAGCAAGTTGTaGTTGAGAATAAGAATCCTCAGTTTCGGCATGGCA | + |
|
Preference number: 6 (lower is better) Translates to: AKTSTGRDLSKL*LRIRILSFGMA Trigger: TGCCATGCCGAAACTGAGGATTCTTATTCTCAACAACAACTTGCTGAGGTCCCTACCGGTGGACGTCTTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS CAA 72 bp | TTAATTTCGGACGCAGAGGAATTGGCATCCCTTCTCTaGGACCGCTTTCGGTTCCTCAGGATAAACACGAGC | + |
|
Preference number: 6 (lower is better) Translates to: LISDAEELASLL*DRFRFLRINTS Trigger: GCTCGTGTTTATCCTGAGGAACCGAAAGCGGTCCAAGAGAAGGGATGCCAATTCCTCTGCGTCCGAAATTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS CAA 72 bp | ACTGTCTGTAGGGAATTAATTTCGGACGCAGAGGAATaGGCATCCCTTCTCTTGGACCGCTTTCGGTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: TVCRELISDAEE*ASLLLDRFRFL Trigger: GAGGAACCGAAAGCGGTCCAAGAGAAGGGATGCCAATTCCTCTGCGTCCGAAATTAATTCCCTACAGACAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS CAA 90 bp | TTGGAAAGCTTAGGCTTCAAATCAGCCAAGCTGCTCACGTTCCGGTaGTTACAGTTCATCTTTAAGCCTGAGCCTGGGATGTGGTCACAG | + |
|
Preference number: 6 (lower is better) Translates to: LESLGFKSAKLLTFR*LQFIFKPEPGMWSQ Trigger: CTGTGACCACATCCCAGGCTCAGGCTTAAAGATGAACTGTAACAACCGGAACGTGAGCAGCTTGGCTGATTTGAAGCCTAAGCTTTCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS CAA 90 bp | ACCCCAGCAAAGACGTCCACCGGTAGGGACCTCAGCAAGTTGTTGTaGAGAATAAGAATCCTCAGTTTCGGCATGGCATTGAAAGTACCA | + |
|
Preference number: 6 (lower is better) Translates to: TPAKTSTGRDLSKLL*RIRILSFGMALKVP Trigger: TGGTACTTTCAATGCCATGCCGAAACTGAGGATTCTTATTCTCAACAACAACTTGCTGAGGTCCCTACCGGTGGACGTCTTTGCTGGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS CAA 90 bp | GAGACCCCAGCAAAGACGTCCACCGGTAGGGACCTCAGCAAGTTGTaGTTGAGAATAAGAATCCTCAGTTTCGGCATGGCATTGAAAGTA | + |
|
Preference number: 6 (lower is better) Translates to: ETPAKTSTGRDLSKL*LRIRILSFGMALKV Trigger: TACTTTCAATGCCATGCCGAAACTGAGGATTCTTATTCTCAACAACAACTTGCTGAGGTCCCTACCGGTGGACGTCTTTGCTGGGGTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS CAA 90 bp | GAGTCACAGACTGTCTGTAGGGAATTAATTTCGGACGCAGAGGAATaGGCATCCCTTCTCTTGGACCGCTTTCGGTTCCTCAGGATAAAC | + |
|
Preference number: 6 (lower is better) Translates to: ESQTVCRELISDAEE*ASLLLDRFRFLRIN Trigger: GTTTATCCTGAGGAACCGAAAGCGGTCCAAGAGAAGGGATGCCAATTCCTCTGCGTCCGAAATTAATTCCCTACAGACAGTCTGTGACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS GCA 72 bp | TGCTTTCGAAAAGACTTGATCTTGTTGTTGTTGATGTaGAGCCGTTTCACCAGCTGCAGCCCCAGAAATGCC | + |
|
Preference number: 6 (lower is better) Translates to: CFRKDLILLLLM*SRFTSCSPRNA Trigger: GGCATTTCTGGGGCTGCAGCTGGTGAAACGGCTGCACATCAACAACAACAAGATCAAGTCTTTTCGAAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS CAA 72 bp | TTAGGCTTCAAATCAGCCAAGCTGCTCACGTTCCGGTaGTTACAGTTCATCTTTAAGCCTGAGCCTGGGATG | + |
|
Preference number: 6 (lower is better) Translates to: LGFKSAKLLTFR*LQFIFKPEPGM Trigger: CATCCCAGGCTCAGGCTTAAAGATGAACTGTAACAACCGGAACGTGAGCAGCTTGGCTGATTTGAAGCCTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS CAA 72 bp | AAGACGTCCACCGGTAGGGACCTCAGCAAGTTGTTGTaGAGAATAAGAATCCTCAGTTTCGGCATGGCATTG | + |
|
Preference number: 6 (lower is better) Translates to: KTSTGRDLSKLL*RIRILSFGMAL Trigger: CAATGCCATGCCGAAACTGAGGATTCTTATTCTCAACAACAACTTGCTGAGGTCCCTACCGGTGGACGTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS CAA 90 bp | GGTAGGGTGCTGATGAGATTGTCGTTTAAAATGAGGACTTCCAACTaGTTCAAGTCCTGGAAGGCCCCCGGGTCTATATCCCGTAATAAA | + |
|
Preference number: 6 (lower is better) Translates to: GRVLMRLSFKMRTSN*FKSWKAPGSISRNK Trigger: TTTATTACGGGATATAGACCCGGGGGCCTTCCAGGACTTGAACAAGTTGGAAGTCCTCATTTTAAACGACAATCTCATCAGCACCCTACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS CAA 72 bp | TGGATCTTGTTATCTCGAAGGAAAAGCTCCTGCACGTaGGAAAGCTTAGGCTTCAAATCAGCCAAGCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: WILLSRRKSSCT*ESLGFKSAKLL Trigger: GAGCAGCTTGGCTGATTTGAAGCCTAAGCTTTCCAACGTGCAGGAGCTTTTCCTTCGAGATAACAAGATCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS GCA 72 bp | ATGCTATGGATCTTGTTATCTCGAAGGAAAAGCTCCTaGACGTTGGAAAGCTTAGGCTTCAAATCAGCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: MLWILLSRRKSS*TLESLGFKSAK Trigger: CTTGGCTGATTTGAAGCCTAAGCTTTCCAACGTGCAGGAGCTTTTCCTTCGAGATAACAAGATCCATAGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS CAA 90 bp | ATGGGCACATACTGGAATACATTAGCAGGTAGGGTGCTGATGAGATaGTCGTTTAAAATGAGGACTTCCAACTTGTTCAAGTCCTGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: MGTYWNTLAGRVLMR*SFKMRTSNLFKSWK Trigger: CTTCCAGGACTTGAACAAGTTGGAAGTCCTCATTTTAAACGACAATCTCATCAGCACCCTACCTGCTAATGTATTCCAGTATGTGCCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
||
| CDS GCA 72 bp | TTTCACAGTCTACGTGTAAGTCCCCTTCTATCTCATTaGAAGAACAGATCTTCTCTTTACAAACGTCCCCTG | + |
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Preference number: 6 (lower is better) Translates to: FHSLRVSPLLSH*KNRSSLYKRPL Trigger: CAGGGGACGTTTGTAAAGAGAAGATCTGTTCTTGCAATGAGATAGAAGGGGACTTACACGTAGACTGTGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS CCA 72 bp | TCGTTTAAAATGAGGACTTCCAACTTGTTCAAGTCCTaGAAGGCCCCCGGGTCTATATCCCGTAATAAATTA | + |
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Preference number: 6 (lower is better) Translates to: SFKMRTSNLFKS*KAPGSISRNKL Trigger: TAATTTATTACGGGATATAGACCCGGGGGCCTTCCAGGACTTGAACAAGTTGGAAGTCCTCATTTTAAACGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS CAA 72 bp | AGGTTCTTGAAAGTGTTGTTCTCTATGTTTGCGATGTaGTTGTTGCCCAGATCCAACAGAATGAGGTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: RFLKVLFSMFAM*LLPRSNRMRFL Trigger: CAAGAACCTCATTCTGTTGGATCTGGGCAACAACAACATCGCAAACATAGAGAACAACACTTTCAAGAACCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS CAA 72 bp | TACTGGAATACATTAGCAGGTAGGGTGCTGATGAGATaGTCGTTTAAAATGAGGACTTCCAACTTGTTCAAG | + |
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Preference number: 6 (lower is better) Translates to: YWNTLAGRVLMR*SFKMRTSNLFK Trigger: CTTGAACAAGTTGGAAGTCCTCATTTTAAACGACAATCTCATCAGCACCCTACCTGCTAATGTATTCCAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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| CDS TCA 72 bp | ATCCAACAGAATGAGGTTCTTGTAATCCACAAAGTGTaGTTTTCGGATGCTATGGATCTTGTTATCTCGAAG | + |
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Preference number: 6 (lower is better) Translates to: IQQNEVLVIHKV*FSDAMDLVISK Trigger: CTTCGAGATAACAAGATCCATAGCATCCGAAAATCACACTTTGTGGATTACAAGAACCTCATTCTGTTGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100322.4 |
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