Pregenerated sensors for SLFN9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000069793Ensembl transcript IDs: ENSMUST00000038211.13, ENSMUST00000092840.11, ENSMUST00000138797.2
Found 199 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GATGTCCAACAAGGCCAACCTCTGCCACATATGCGGCCTGCACCCTaGGTCCCTCCATGTGTATTCTTTGGTTGGTGGTCCAGTCCTCAG | + |
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Preference number: 1 (lower is better) Translates to: DVQQGQPLPHMRPAP*VPPCVFFGWWSSPQ Trigger: CTGAGGACTGGACCACCAACCAAAGAATACACATGGAGGGACCCAGGGTGCAGGCCGCATATGTGGCAGAGGTTGGCCTTGTTGGACATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
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| 3UTR CCA 90 bp | TCTGAGGGTGCTGCCTCATCTTGCCACCCTGGCATTCCCCAACAATaGGGTTTCAAACACACTCAGGCCCAAGGGCCTCTCTTCATACCT | + |
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Preference number: 1 (lower is better) Translates to: SEGAASSCHPGIPQQ*GFKHTQAQGPLFIP Trigger: AGGTATGAAGAGAGGCCCTTGGGCCTGAGTGTGTTTGAAACCCCATTGTTGGGGAATGCCAGGGTGGCAAGATGAGGCAGCACCCTCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
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| 3UTR CCA 90 bp | TCTGGCATCCACAATATCATCTGGGTTTGGTGGCTGTATATGGGATaGATTCCCAGGTGGGGCAGTCCCGGGATGGCTTTTCCTTCAGTC | + |
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Preference number: 1 (lower is better) Translates to: SGIHNIIWVWWLYMG*IPRWGSPGMAFPSV Trigger: GACTGAAGGAAAAGCCATCCCGGGACTGCCCCACCTGGGAATCCATCCCATATACAGCCACCAAACCCAGATGATATTGTGGATGCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
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| 3UTR CCA 90 bp | CACTTTCTGGCATCCACAATATCATCTGGGTTTGGTGGCTGTATATaGGATGGATTCCCAGGTGGGGCAGTCCCGGGATGGCTTTTCCTT | + |
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Preference number: 1 (lower is better) Translates to: HFLASTISSGFGGCI*DGFPGGAVPGWLFL Trigger: AAGGAAAAGCCATCCCGGGACTGCCCCACCTGGGAATCCATCCCATATACAGCCACCAAACCCAGATGATATTGTGGATGCCAGAAAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
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| 3UTR CCA 90 bp | TCCAATGGTTGGCTCCAATCTTCCTCCTCTGTATTTGTCAGGCTCTaGCAGAGCCTCTCAGGAGACAGCCATATCAGGCTTCCATCAGTA | + |
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Preference number: 1 (lower is better) Translates to: SNGWLQSSSSVFVRL*QSLSGDSHIRLPSV Trigger: TACTGATGGAAGCCTGATATGGCTGTCTCCTGAGAGGCTCTGCCAGAGCCTGACAAATACAGAGGAGGAAGATTGGAGCCAACCATTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
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| 3UTR CCA 90 bp | CTCCTTCAGTCCCTTCTAAAACTCCTCCTTGCTCAGTCCAATGGTTaGCTCCAATCTTCCTCCTCTGTATTTGTCAGGCTCTGGCAGAGC | + |
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Preference number: 1 (lower is better) Translates to: LLQSLLKLLLAQSNG*LQSSSSVFVRLWQS Trigger: GCTCTGCCAGAGCCTGACAAATACAGAGGAGGAAGATTGGAGCCAACCATTGGACTGAGCAAGGAGGAGTTTTAGAAGGGACTGAAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
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| 3UTR GCA 90 bp | GTGCAAACCCCCTCAGCTCCTTCAGTCCCTTCTAAAACTCCTCCTTaGTCAGTCCAATGGTTGGCTCCAATCTTCCTCCTCTGTATTTGT | + |
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Preference number: 1 (lower is better) Translates to: VQTPSAPSVPSKTPP*SVQWLAPIFLLCIC Trigger: ACAAATACAGAGGAGGAAGATTGGAGCCAACCATTGGACTGAGCAAGGAGGAGTTTTAGAAGGGACTGAAGGAGCTGAGGGGGTTTGCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
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| 3UTR CCA 90 bp | TCAGCTCCTTCAGTCCCTTCTAAAACTCCTCCTTGCTCAGTCCAATaGTTGGCTCCAATCTTCCTCCTCTGTATTTGTCAGGCTCTGGCA | + |
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Preference number: 1 (lower is better) Translates to: SAPSVPSKTPPCSVQ*LAPIFLLCICQALA Trigger: TGCCAGAGCCTGACAAATACAGAGGAGGAAGATTGGAGCCAACCATTGGACTGAGCAAGGAGGAGTTTTAGAAGGGACTGAAGGAGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
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| 3UTR TCA 90 bp | GCTTGTGTTCTTGCTGTTGCCTCATGTGATTTGGTTCCTGTGTTCTaGGAGTTCCAGGTGTGTACCTCTGAGCAGAAGTGGTGGACTTAC | + |
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Preference number: 1 (lower is better) Translates to: ACVLAVASCDLVPVF*EFQVCTSEQKWWTY Trigger: GTAAGTCCACCACTTCTGCTCAGAGGTACACACCTGGAACTCTCAGAACACAGGAACCAAATCACATGAGGCAACAGCAAGAACACAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
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| 3UTR CCA 90 bp | CCTTGGTATCTGTTGCTTGTGTTCTTGCTGTTGCCTCATGTGATTTaGTTCCTGTGTTCTGAGAGTTCCAGGTGTGTACCTCTGAGCAGA | + |
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Preference number: 1 (lower is better) Translates to: PWYLLLVFLLLPHVI*FLCSESSRCVPLSR Trigger: TCTGCTCAGAGGTACACACCTGGAACTCTCAGAACACAGGAACCAAATCACATGAGGCAACAGCAAGAACACAAGCAACAGATACCAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
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| 3UTR CCA 90 bp | ACTGATTTCCAGAGTGGTTGTACCAGTTTGCAATCTCACCAGCAATaGAGTAGTATTCCTTTCTCCACATCCTCACGGCAGCATCTGCTG | + |
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Preference number: 1 (lower is better) Translates to: TDFQSGCTSLQSHQQ*SSIPFSTSSRQHLL Trigger: CAGCAGATGCTGCCGTGAGGATGTGGAGAAAGGAATACTACTCCATTGCTGGTGAGATTGCAAACTGGTACAACCACTCTGGAAATCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
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| 3UTR GCA 90 bp | TATGGTCTCAACGTTCCCATAGCCTATGTCATGTGTACATTGCCTTaGCAGTCTTCTCTCCAGCTTTGTTTTCAGCCTCAGTTAGTTACG | + |
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Preference number: 1 (lower is better) Translates to: YGLNVPIAYVMCTLP*QSSLQLCFQPQLVT Trigger: CGTAACTAACTGAGGCTGAAAACAAAGCTGGAGAGAAGACTGGCAAGGCAATGTACACATGACATAGGCTATGGGAACGTTGAGACCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
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| 3UTR-3UTR CCA 90 bp | AAGGGCCTCTCTTCATACCTGATGTCCAACAAGGCCAACCTCTGCCACATATGCGGGGCAGTCCCGGGATaGCTTTTCCTTCAGTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: KGLSSYLMSNKANLCHICGAVPG*LFLQSL Trigger: CAGAGACTGAAGGAAAAGCCATCCCGGGACTGCCCC...GCATATGTGGCAGAGGTTGGCCTTGTTGGACATCAGGTATGAAGAGAGGCCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
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| 3UTR CAA 90 bp | CTTCCATCAGTAAGCACTTTCTGGCATCCACAATATCATCTGGGTTaGGTGGCTGTATATGGGATGGATTCCCAGGTGGGGCAGTCCCGG | + |
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Preference number: 2 (lower is better) Translates to: LPSVSTFWHPQYHLG*VAVYGMDSQVGQSR Trigger: CCGGGACTGCCCCACCTGGGAATCCATCCCATATACAGCCACCAAACCCAGATGATATTGTGGATGCCAGAAAGTGCTTACTGATGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
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| 3UTR-3UTR GCA 90 bp | GATTGGAGCGCTGTGGCACAAAATCAGCTCCAGGCGCAGACCCCAGTGCTACTTATGTGTACATTGCCTTaGCAGTCTTCTCTCCAGCTT | + |
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Preference number: 2 (lower is better) Translates to: DWSAVAQNQLQAQTPVLLMCTLP*QSSLQL Trigger: AAGCTGGAGAGAAGACTGGCAAGGCAATGTACACAT...AAGTAGCACTGGGGTCTGCGCCTGGAGCTGATTTTGTGCCACAGCGCTCCAATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
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| 3UTR-3UTR GCA 90 bp | AAGTGGTGGACTTACCTGCGCTCACAGGCTTGTCCACACTTGTGGGAGGCCAGTATGTCATGTGTACATTaGCTTGCCAGTCTTCTCTCC | + |
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Preference number: 2 (lower is better) Translates to: KWWTYLRSQACPHLWEASMSCVH*LASLLS Trigger: GGAGAGAAGACTGGCAAGGCAATGTACACATGACAT...ACTGGCCTCCCACAAGTGTGGACAAGCCTGTGAGCGCAGGTAAGTCCACCACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
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| 3UTR-3UTR GCA 90 bp | GGCATCCACAATATCATCTGGGTTTGGTGGCTGTATATGGGATGGATTCCCAGGAGTGGTGGACTTACCTaGGCTCACAGGCTTGTCCAC | + |
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Preference number: 2 (lower is better) Translates to: GIHNIIWVWWLYMGWIPRSGGLT*AHRLVH Trigger: GTGGACAAGCCTGTGAGCGCAGGTAAGTCCACCACT...CCTGGGAATCCATCCCATATACAGCCACCAAACCCAGATGATATTGTGGATGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
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| 3UTR CAA 90 bp | GCTCCTTCAGTCCCTTCTAAAACTCCTCCTTGCTCAGTCCAATGGTaGGCTCCAATCTTCCTCCTCTGTATTTGTCAGGCTCTGGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: APSVPSKTPPCSVQW*APIFLLCICQALAE Trigger: CTCTGCCAGAGCCTGACAAATACAGAGGAGGAAGATTGGAGCCAACCATTGGACTGAGCAAGGAGGAGTTTTAGAAGGGACTGAAGGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
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| 3UTR-3UTR GCA 90 bp | GGATGGATTCCCAGGTGGGGCAGTCCCGGGATGGCTTTTCCTTCAGTCTCTGTTAGGCGCAGACCCCAGTaGTACTTAATATTATGTTTT | + |
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Preference number: 2 (lower is better) Translates to: GWIPRWGSPGMAFPSVSVRRRPQ*YLILCF Trigger: AAAACATAATATTAAGTAGCACTGGGGTCTGCGCCT...AACAGAGACTGAAGGAAAAGCCATCCCGGGACTGCCCCACCTGGGAATCCATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
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| 3UTR CAA 90 bp | GAGGGAGAACTGGGTTCTGATGATGCCAAGTGGCCTTGGTATCTGTaGCTTGTGTTCTTGCTGTTGCCTCATGTGATTTGGTTCCTGTGT | + |
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Preference number: 2 (lower is better) Translates to: EGELGSDDAKWPWYL*LVFLLLPHVIWFLC Trigger: ACACAGGAACCAAATCACATGAGGCAACAGCAAGAACACAAGCAACAGATACCAAGGCCACTTGGCATCATCAGAACCCAGTTCTCCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
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| 3UTR CAA 90 bp | CCTTTCTCCACATCCTCACGGCAGCATCTGCTGTCACCTGAGTTTTaGATCTTAGACATTCTCACTGGTGTGAGGTGGAATCTCAGGGAT | + |
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Preference number: 2 (lower is better) Translates to: PFSTSSRQHLLSPEF*ILDILTGVRWNLRD Trigger: ATCCCTGAGATTCCACCTCACACCAGTGAGAATGTCTAAGATCAAAAACTCAGGTGACAGCAGATGCTGCCGTGAGGATGTGGAGAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
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| 3UTR CAA 90 bp | GATGATGCCAAGTGGCCTTGGTATCTGTTGCTTGTGTTCTTGCTGTaGCCTCATGTGATTTGGTTCCTGTGTTCTGAGAGTTCCAGGTGT | + |
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Preference number: 2 (lower is better) Translates to: DDAKWPWYLLLVFLL*PHVIWFLCSESSRC Trigger: ACACCTGGAACTCTCAGAACACAGGAACCAAATCACATGAGGCAACAGCAAGAACACAAGCAACAGATACCAAGGCCACTTGGCATCATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
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| 3UTR CAA 90 bp | GGTTCTGATGATGCCAAGTGGCCTTGGTATCTGTTGCTTGTGTTCTaGCTGTTGCCTCATGTGATTTGGTTCCTGTGTTCTGAGAGTTCC | + |
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Preference number: 2 (lower is better) Translates to: GSDDAKWPWYLLLVF*LLPHVIWFLCSESS Trigger: GGAACTCTCAGAACACAGGAACCAAATCACATGAGGCAACAGCAAGAACACAAGCAACAGATACCAAGGCCACTTGGCATCATCAGAACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
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| 3UTR-3UTR TCA 90 bp | CCTTGCTCAGTCCAATGGTTGGCTCCAATCTTCCTCCTCTGTATTTGTCAGGCTATGTTCACTGCCAGTTaGCCAGTACTGTTTGTTGGA | + |
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Preference number: 2 (lower is better) Translates to: PCSVQWLAPIFLLCICQAMFTAS*PVLFVG Trigger: TCCAACAAACAGTACTGGTCAACTGGCAGTGAACAT...AGCCTGACAAATACAGAGGAGGAAGATTGGAGCCAACCATTGGACTGAGCAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
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| 3UTR-3UTR GCA 90 bp | CCTTGCTCAGTCCAATGGTTGGCTCCAATCTTCCTCCTCTGTATTTGTCAGGCTGTGGTTGTACCAGTTTaGAATCTCACCAGCAATGGA | + |
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Preference number: 2 (lower is better) Translates to: PCSVQWLAPIFLLCICQAVVVPV*NLTSNG Trigger: TCCATTGCTGGTGAGATTGCAAACTGGTACAACCAC...AGCCTGACAAATACAGAGGAGGAAGATTGGAGCCAACCATTGGACTGAGCAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
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| 3UTR-3UTR CCA 90 bp | TCTGATGATGCCAAGTGGCCTTGGTATCTGTTGCTTGTGTTCTTGCTGTTGCCTCCAGTTCTTTCCCAGTaGTATTTAGGGATTGGAGCG | + |
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Preference number: 2 (lower is better) Translates to: SDDAKWPWYLLLVFLLLPPVLSQ*YLGIGA Trigger: CGCTCCAATCCCTAAATACCACTGGGAAAGAACTGG...AGGCAACAGCAAGAACACAAGCAACAGATACCAAGGCCACTTGGCATCATCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
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| 3UTR-3UTR CCA 90 bp | TTTCTGAGGAACCACCAGACTGATTTCCAGAGTGGTTGTACCAGTTTGCAATCTCATGATAGCTCGCTGTaGAGGGAGAACTGGGTTCTG | + |
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Preference number: 2 (lower is better) Translates to: FLRNHQTDFQSGCTSLQSHDSSL*RENWVL Trigger: CAGAACCCAGTTCTCCCTCCACAGCGAGCTATCATG...AGATTGCAAACTGGTACAACCACTCTGGAAATCAGTCTGGTGGTTCCTCAGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
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| 3UTR CAA 90 bp | AGTCCTTATGGTCTCAACGTTCCCATAGCCTATGTCATGTGTACATaGCCTTGCCAGTCTTCTCTCCAGCTTTGTTTTCAGCCTCAGTTA | + |
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Preference number: 2 (lower is better) Translates to: SPYGLNVPIAYVMCT*PCQSSLQLCFQPQL Trigger: TAACTGAGGCTGAAAACAAAGCTGGAGAGAAGACTGGCAAGGCAATGTACACATGACATAGGCTATGGGAACGTTGAGACCATAAGGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
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| 3UTR-3UTR CCA 90 bp | GGCATCCACAATATCATCTGGGTTTGGTGGCTGTATATGGGATGGATTCCCAGGAGTTGTCTTCATCTCTaGTTTCAGTCCTTATGGTCT | + |
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Preference number: 2 (lower is better) Translates to: GIHNIIWVWWLYMGWIPRSCLHL*FQSLWS Trigger: AGACCATAAGGACTGAAACCAGAGATGAAGACAACT...CCTGGGAATCCATCCCATATACAGCCACCAAACCCAGATGATATTGTGGATGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
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| 3UTR-3UTR CCA 90 bp | CTGATGATGCCAAGTGGCCTTGGTATCTGTTGCTTGTGTTCTTGCTGTTGCCTCAGTTGTCTTCATCTCTaGTTTCAGTCCTTATGGTCT | + |
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Preference number: 2 (lower is better) Translates to: LMMPSGLGICCLCSCCCLSCLHL*FQSLWS Trigger: AGACCATAAGGACTGAAACCAGAGATGAAGACAACT...GAGGCAACAGCAAGAACACAAGCAACAGATACCAAGGCCACTTGGCATCATCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
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| 3UTR CAA 90 bp | TTATGGTCTCAACGTTCCCATAGCCTATGTCATGTGTACATTGCCTaGCCAGTCTTCTCTCCAGCTTTGTTTTCAGCCTCAGTTAGTTAC | + |
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Preference number: 2 (lower is better) Translates to: LWSQRSHSLCHVYIA*PVFSPALFSASVSY Trigger: GTAACTAACTGAGGCTGAAAACAAAGCTGGAGAGAAGACTGGCAAGGCAATGTACACATGACATAGGCTATGGGAACGTTGAGACCATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
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| 3UTR-3UTR CCA 90 bp | TTTAGATTCTGGATGGTTTTGTTCAATTCCTTCACCTGTTTGGTTGTGTTTTCCGCTTGTCCACACTTGTaGGAGGCCAGTTCTTTCCCA | + |
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Preference number: 2 (lower is better) Translates to: FRFWMVLFNSFTCLVVFSACPHL*EASSFP Trigger: TGGGAAAGAACTGGCCTCCCACAAGTGTGGACAAGC...GGAAAACACAACCAAACAGGTGAAGGAATTGAACAAAACCATCCAGAATCTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
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| 3UTR-3UTR CCA 90 bp | GTCTCTGTTCCCTACTTTGTCTTCATAGTTTCTCCTGTAAGTAATAGGTTCACCCTCACTGGTGTGAGGTaGAATCTCAGGGATGTTTTG | + |
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Preference number: 2 (lower is better) Translates to: VSVPYFVFIVSPVSNRFTLTGVR*NLRDVL Trigger: CAAAACATCCCTGAGATTCCACCTCACACCAGTGAG...GGTGAACCTATTACTTACAGGAGAAACTATGAAGACAAAGTAGGGAACAGAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
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| 3UTR CAA 90 bp | AGATTTTCCCCCACCTTCTCTTCTATTAGTTTCAGTGTGTCTGGTTaGATGTGGAAGTCCTTGATCCACTTGGACTTGAGATTTGTACAG | + |
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Preference number: 2 (lower is better) Translates to: RFSPTFSSISFSVSG*MWKSLIHLDLRFVQ Trigger: CTGTACAAATCTCAAGTCCAAGTGGATCAAGGACTTCCACATCAAACCAGACACACTGAAACTAATAGAAGAGAAGGTGGGGGAAAATCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
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| 3UTR CCA 72 bp | GCGGCCTGCACCCTGGGTCCCTCCATGTGTATTCTTTaGTTGGTGGTCCAGTCCTCAGGCACTCTGGGGGCC | + |
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Preference number: 3 (lower is better) Translates to: AACTLGPSMCIL*LVVQSSGTLGA Trigger: GGCCCCCAGAGTGCCTGAGGACTGGACCACCAACCAAAGAATACACATGGAGGGACCCAGGGTGCAGGCCGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
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| 3UTR TCA 72 bp | TTGGTGGTCCAGTCCTCAGGCACTCTGGGGGCCTGTTaGCATTGTTGCTCCCTGCGTGGGGTGCAAACCCCC | + |
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Preference number: 3 (lower is better) Translates to: LVVQSSGTLGAC*HCCSLRGVQTP Trigger: GGGGGTTTGCACCCCACGCAGGGAGCAACAATGTCAACAGGCCCCCAGAGTGCCTGAGGACTGGACCACCAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
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| 3UTR CCA 72 bp | GCACCCTGGGTCCCTCCATGTGTATTCTTTGGTTGGTaGTCCAGTCCTCAGGCACTCTGGGGGCCTGTTGAC | + |
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Preference number: 3 (lower is better) Translates to: APWVPPCVFFGW*SSPQALWGPVD Trigger: GTCAACAGGCCCCCAGAGTGCCTGAGGACTGGACCACCAACCAAAGAATACACATGGAGGGACCCAGGGTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
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| 3UTR CCA 72 bp | CCTGCACCCTGGGTCCCTCCATGTGTATTCTTTGGTTaGTGGTCCAGTCCTCAGGCACTCTGGGGGCCTGTT | + |
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Preference number: 3 (lower is better) Translates to: PAPWVPPCVFFG*WSSPQALWGPV Trigger: AACAGGCCCCCAGAGTGCCTGAGGACTGGACCACCAACCAAAGAATACACATGGAGGGACCCAGGGTGCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
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| 3UTR CCA 72 bp | CAAGGCCAACCTCTGCCACATATGCGGCCTGCACCCTaGGTCCCTCCATGTGTATTCTTTGGTTGGTGGTCC | + |
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Preference number: 3 (lower is better) Translates to: QGQPLPHMRPAP*VPPCVFFGWWS Trigger: GGACCACCAACCAAAGAATACACATGGAGGGACCCAGGGTGCAGGCCGCATATGTGGCAGAGGTTGGCCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
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| 3UTR CCA 72 bp | GCTGCCTCATCTTGCCACCCTGGCATTCCCCAACAATaGGGTTTCAAACACACTCAGGCCCAAGGGCCTCTC | + |
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Preference number: 3 (lower is better) Translates to: AASSCHPGIPQQ*GFKHTQAQGPL Trigger: GAGAGGCCCTTGGGCCTGAGTGTGTTTGAAACCCCATTGTTGGGGAATGCCAGGGTGGCAAGATGAGGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
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| 3UTR GCA 72 bp | AGGTGTGTACCTCTGAGCAGAAGTGGTGGACTTACCTaGGCTCACAGGCTTGTCCACACTTGTGGGAGGCCA | + |
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Preference number: 3 (lower is better) Translates to: RCVPLSRSGGLT*AHRLVHTCGRP Trigger: TGGCCTCCCACAAGTGTGGACAAGCCTGTGAGCGCAGGTAAGTCCACCACTTCTGCTCAGAGGTACACACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
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| 3UTR GCA 72 bp | CTCTCTTCATACCTGATGTCCAACAAGGCCAACCTCTaGCACATATGCGGCCTGCACCCTGGGTCCCTCCAT | + |
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Preference number: 3 (lower is better) Translates to: LSSYLMSNKANL*HICGLHPGSLH Trigger: ATGGAGGGACCCAGGGTGCAGGCCGCATATGTGGCAGAGGTTGGCCTTGTTGGACATCAGGTATGAAGAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
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| 3UTR TCA 72 bp | GGTTCCTGTGTTCTGAGAGTTCCAGGTGTGTACCTCTaGGCAGAAGTGGTGGACTTACCTGCGCTCACAGGC | + |
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Preference number: 3 (lower is better) Translates to: GSCVLRVPGVYL*AEVVDLPALTG Trigger: GCCTGTGAGCGCAGGTAAGTCCACCACTTCTGCTCAGAGGTACACACCTGGAACTCTCAGAACACAGGAACC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
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| 3UTR GCA 72 bp | TGTCCAACAAGGCCAACCTCTGCCACATATGCGGCCTaGACCCTGGGTCCCTCCATGTGTATTCTTTGGTTG | + |
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Preference number: 3 (lower is better) Translates to: CPTRPTSATYAA*TLGPSMCILWL Trigger: CAACCAAAGAATACACATGGAGGGACCCAGGGTGCAGGCCGCATATGTGGCAGAGGTTGGCCTTGTTGGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
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| 3UTR GCA 72 bp | TACCTGATGTCCAACAAGGCCAACCTCTGCCACATATaGGGCCTGCACCCTGGGTCCCTCCATGTGTATTCT | + |
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Preference number: 3 (lower is better) Translates to: YLMSNKANLCHI*GLHPGSLHVYS Trigger: AGAATACACATGGAGGGACCCAGGGTGCAGGCCGCATATGTGGCAGAGGTTGGCCTTGTTGGACATCAGGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
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| 3UTR CCA 72 bp | GTTCTTTCCCAGTGGTATTTAGGGATTGGAGCGCTGTaGCACAAAATCAGCTCCAGGCGCAGACCCCAGTGC | + |
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Preference number: 3 (lower is better) Translates to: VLSQWYLGIGAL*HKISSRRRPQC Trigger: GCACTGGGGTCTGCGCCTGGAGCTGATTTTGTGCCACAGCGCTCCAATCCCTAAATACCACTGGGAAAGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
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| 3UTR CCA 72 bp | TGGGTTTGGTGGCTGTATATGGGATGGATTCCCAGGTaGGGCAGTCCCGGGATGGCTTTTCCTTCAGTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: WVWWLYMGWIPR*GSPGMAFPSVS Trigger: AGAGACTGAAGGAAAAGCCATCCCGGGACTGCCCCACCTGGGAATCCATCCCATATACAGCCACCAAACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
||
| 3UTR CCA 72 bp | GCATCCACAATATCATCTGGGTTTGGTGGCTGTATATaGGATGGATTCCCAGGTGGGGCAGTCCCGGGATGG | + |
|
Preference number: 3 (lower is better) Translates to: ASTISSGFGGCI*DGFPGGAVPGW Trigger: CCATCCCGGGACTGCCCCACCTGGGAATCCATCCCATATACAGCCACCAAACCCAGATGATATTGTGGATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
||
| 3UTR CCA 72 bp | TGGGGTACCCATGATAGCTCGCTGTGGAGGGAGAACTaGGTTCTGATGATGCCAAGTGGCCTTGGTATCTGT | + |
|
Preference number: 3 (lower is better) Translates to: WGTHDSSLWREN*VLMMPSGLGIC Trigger: ACAGATACCAAGGCCACTTGGCATCATCAGAACCCAGTTCTCCCTCCACAGCGAGCTATCATGGGTACCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| 3UTR-3UTR CAA 90 bp | GGATGGATTCCCAGGTGGGGCAGTCCCGGGATGGCTTTTCCTTCAGTCTCTGTTCTTGGTATCTGTTGCTaGTGTTCTTGCTGTTGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: GWIPRWGSPGMAFPSVSVLGICC*CSCCCL Trigger: GAGGCAACAGCAAGAACACAAGCAACAGATACCAAG...AACAGAGACTGAAGGAAAAGCCATCCCGGGACTGCCCCACCTGGGAATCCATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
||
| 3UTR GCA 72 bp | CCCTCAGCTCCTTCAGTCCCTTCTAAAACTCCTCCTTaGTCAGTCCAATGGTTGGCTCCAATCTTCCTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: PSAPSVPSKTPP*SVQWLAPIFLL Trigger: GAGGAGGAAGATTGGAGCCAACCATTGGACTGAGCAAGGAGGAGTTTTAGAAGGGACTGAAGGAGCTGAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
||
| 3UTR CCA 72 bp | TGGACTTACCTGCGCTCACAGGCTTGTCCACACTTGTaGGAGGCCAGTTCTTTCCCAGTGGTATTTAGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: WTYLRSQACPHL*EASSFPVVFRD Trigger: ATCCCTAAATACCACTGGGAAAGAACTGGCCTCCCACAAGTGTGGACAAGCCTGTGAGCGCAGGTAAGTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| 3UTR CCA 72 bp | CACAATATCATCTGGGTTTGGTGGCTGTATATGGGATaGATTCCCAGGTGGGGCAGTCCCGGGATGGCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: HNIIWVWWLYMG*IPRWGSPGMAF Trigger: AAAAGCCATCCCGGGACTGCCCCACCTGGGAATCCATCCCATATACAGCCACCAAACCCAGATGATATTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
||
| 3UTR CCA 72 bp | CTTGTCCACACTTGTGGGAGGCCAGTTCTTTCCCAGTaGTATTTAGGGATTGGAGCGCTGTGGCACAAAATC | + |
|
Preference number: 3 (lower is better) Translates to: LVHTCGRPVLSQ*YLGIGALWHKI Trigger: GATTTTGTGCCACAGCGCTCCAATCCCTAAATACCACTGGGAAAGAACTGGCCTCCCACAAGTGTGGACAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| 3UTR CCA 72 bp | GCTGTGGAGGGAGAACTGGGTTCTGATGATGCCAAGTaGCCTTGGTATCTGTTGCTTGTGTTCTTGCTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: AVEGELGSDDAK*PWYLLLVFLLL Trigger: CAACAGCAAGAACACAAGCAACAGATACCAAGGCCACTTGGCATCATCAGAACCCAGTTCTCCCTCCACAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| 3UTR-3UTR CAA 90 bp | AAGGGCCTCTCTTCATACCTGATGTCCAACAAGGCCAACCTCTGCCACATATGCTGGCCTTGGTATCTGTaGCTTGTGTTCTTGCTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: KGLSSYLMSNKANLCHICWPWYL*LVFLLL Trigger: CAACAGCAAGAACACAAGCAACAGATACCAAGGCCA...GCATATGTGGCAGAGGTTGGCCTTGTTGGACATCAGGTATGAAGAGAGGCCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
||
| 3UTR-3UTR CAA 90 bp | GGATGGATTCCCAGGTGGGGCAGTCCCGGGATGGCTTTTCCTTCAGTCTCTGTTCTGTCACCTGAGTTTTaGATCTTAGACATTCTCACT | + |
|
Preference number: 3 (lower is better) Translates to: GWIPRWGSPGMAFPSVSVLSPEF*ILDILT Trigger: AGTGAGAATGTCTAAGATCAAAAACTCAGGTGACAG...AACAGAGACTGAAGGAAAAGCCATCCCGGGACTGCCCCACCTGGGAATCCATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
||
| 3UTR CCA 72 bp | GAGGGAGAACTGGGTTCTGATGATGCCAAGTGGCCTTaGTATCTGTTGCTTGTGTTCTTGCTGTTGCCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: EGELGSDDAKWP*YLLLVFLLLPH Trigger: ATGAGGCAACAGCAAGAACACAAGCAACAGATACCAAGGCCACTTGGCATCATCAGAACCCAGTTCTCCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| 3UTR-3UTR CAA 90 bp | CCTCTCAGGAGACAGCCATATCAGGCTTCCATCAGTAAGCACTTTCTGGCATCCGTCTTCTCTCCAGCTTaGTTTTCAGCCTCAGTTAGT | + |
|
Preference number: 3 (lower is better) Translates to: PLRRQPYQASISKHFLASVFSPA*FSASVS Trigger: ACTAACTGAGGCTGAAAACAAAGCTGGAGAGAAGAC...GGATGCCAGAAAGTGCTTACTGATGGAAGCCTGATATGGCTGTCTCCTGAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
||
| 3UTR-3UTR CAA 90 bp | AAGGGCCTCTCTTCATACCTGATGTCCAACAAGGCCAACCTCTGCCACATATGCATCCACAGTTTGGCCTaGCTTCTTCTTAGGCTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: KGLSSYLMSNKANLCHICIHSLA*LLLRLH Trigger: ATGAAGCCTAAGAAGAAGCAAGGCCAAACTGTGGAT...GCATATGTGGCAGAGGTTGGCCTTGTTGGACATCAGGTATGAAGAGAGGCCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
||
| 3UTR CCA 72 bp | CAGAGTGGTTGTACCAGTTTGCAATCTCACCAGCAATaGAGTAGTATTCCTTTCTCCACATCCTCACGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: QSGCTSLQSHQQ*SSIPFSTSSRQ Trigger: CTGCCGTGAGGATGTGGAGAAAGGAATACTACTCCATTGCTGGTGAGATTGCAAACTGGTACAACCACTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
||
| 3UTR CCA 72 bp | TCCCTTCTAAAACTCCTCCTTGCTCAGTCCAATGGTTaGCTCCAATCTTCCTCCTCTGTATTTGTCAGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: SLLKLLLAQSNG*LQSSSSVFVRL Trigger: GAGCCTGACAAATACAGAGGAGGAAGATTGGAGCCAACCATTGGACTGAGCAAGGAGGAGTTTTAGAAGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
||
| 3UTR-3UTR CAA 90 bp | AAGGGCCTCTCTTCATACCTGATGTCCAACAAGGCCAACCTCTGCCACATATGCAAGTCCTTGATCCACTaGGACTTGAGATTTGTACAG | + |
|
Preference number: 3 (lower is better) Translates to: KGLSSYLMSNKANLCHICKSLIH*DLRFVQ Trigger: CTGTACAAATCTCAAGTCCAAGTGGATCAAGGACTT...GCATATGTGGCAGAGGTTGGCCTTGTTGGACATCAGGTATGAAGAGAGGCCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
||
| 3UTR-3UTR CAA 90 bp | TGGGTTCTGATGATGCCAAGTGGCCTTGGTATCTGTTGCTTGTGTTCTTGCTGTGTCTTCTCTCCAGCTTaGTTTTCAGCCTCAGTTAGT | + |
|
Preference number: 3 (lower is better) Translates to: WVLMMPSGLGICCLCSCCVFSPA*FSASVS Trigger: ACTAACTGAGGCTGAAAACAAAGCTGGAGAGAAGAC...ACAGCAAGAACACAAGCAACAGATACCAAGGCCACTTGGCATCATCAGAACCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| 3UTR TCA 72 bp | TTTCTCCACATCCTCACGGCAGCATCTGCTGTCACCTaGGTTTTTGATCTTAGACATTCTCACTGGTGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: FLHILTAASAVT*VFDLRHSHWCE Trigger: CTCACACCAGTGAGAATGTCTAAGATCAAAAACTCAGGTGACAGCAGATGCTGCCGTGAGGATGTGGAGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
||
| 3UTR GCA 72 bp | AACGTTCCCATAGCCTATGTCATGTGTACATTGCCTTaGCAGTCTTCTCTCCAGCTTTGTTTTCAGCCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: NVPIAYVMCTLP*QSSLQLCFQPQ Trigger: CTGAGGCTGAAAACAAAGCTGGAGAGAAGACTGGCAAGGCAATGTACACATGACATAGGCTATGGGAACGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| 3UTR CCA 72 bp | TCTGATTTTAAATCAGAGTCTTGCTTTTCTGGTGTGTaGGGTACCCATGATAGCTCGCTGTGGAGGGAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: SDFKSESCFSGV*GTHDSSLWREN Trigger: GTTCTCCCTCCACAGCGAGCTATCATGGGTACCCCACACACCAGAAAAGCAAGACTCTGATTTAAAATCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| 3UTR CCA 72 bp | TCAGTCCCTTCTAAAACTCCTCCTTGCTCAGTCCAATaGTTGGCTCCAATCTTCCTCCTCTGTATTTGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: SVPSKTPPCSVQ*LAPIFLLCICQ Trigger: CTGACAAATACAGAGGAGGAAGATTGGAGCCAACCATTGGACTGAGCAAGGAGGAGTTTTAGAAGGGACTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
||
| 3UTR-3UTR CAA 90 bp | AAGGGCCTCTCTTCATACCTGATGTCCAACAAGGCCAACCTCTGCCACATATGCGTTGACCAGTACTGTTaGTTGGAAATTCTGTCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: KGLSSYLMSNKANLCHICVDQYC*LEILSF Trigger: AAAAGACAGAATTTCCAACAAACAGTACTGGTCAAC...GCATATGTGGCAGAGGTTGGCCTTGTTGGACATCAGGTATGAAGAGAGGCCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
||
| 3UTR-3UTR CAA 90 bp | ATGTCATGTGTACATTGCCTTGCCAGTCTTCTCTCCAGCTTTGTTTTCAGCCTCTCTCATCATCAGGGATaGAACTTAGGGTCTCATATA | + |
|
Preference number: 3 (lower is better) Translates to: MSCVHCLASLLSSFVFSLSHHQG*NLGSHI Trigger: TATATGAGACCCTAAGTTCAATCCCTGATGATGAGA...GAGGCTGAAAACAAAGCTGGAGAGAAGACTGGCAAGGCAATGTACACATGACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| 3UTR CCA 72 bp | TTCACCCTTCTAAGAAATACTGAACCATCCACAGTTTaGCCTTGCTTCTTCTTAGGCTTCATATGGTCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: FTLLRNTEPSTV*PCFFLGFIWSV Trigger: CACAGACCATATGAAGCCTAAGAAGAAGCAAGGCCAAACTGTGGATGGTTCAGTATTTCTTAGAAGGGTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
||
| 3UTR-3UTR CAA 90 bp | ATGTGTACATTGCCTTGCCAGTCTTCTCTCCAGCTTTGTTTTCAGCCTCAGTTATCTCATCATCAGGGATaGAACTTAGGGTCTCATATA | + |
|
Preference number: 3 (lower is better) Translates to: MCTLPCQSSLQLCFQPQLSHHQG*NLGSHI Trigger: TATATGAGACCCTAAGTTCAATCCCTGATGATGAGA...TAACTGAGGCTGAAAACAAAGCTGGAGAGAAGACTGGCAAGGCAATGTACACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| 3UTR-3UTR CAA 90 bp | TTTAGATTCTGGATGGTTTTGTTCAATTCCTTCACCTGTTTGGTTGTGTTTTCCCATGTGTACATTGCCTaGCCAGTCTTCTCTCCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: FRFWMVLFNSFTCLVVFSHVYIA*PVFSPA Trigger: AGCTGGAGAGAAGACTGGCAAGGCAATGTACACATG...GGAAAACACAACCAAACAGGTGAAGGAATTGAACAAAACCATCCAGAATCTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
||
| 3UTR CCA 72 bp | GAGTTTTTGATCTTAGACATTCTCACTGGTGTGAGGTaGAATCTCAGGGATGTTTTGATTTGCATTTCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: EFLILDILTGVR*NLRDVLICISL Trigger: CAGGGAAATGCAAATCAAAACATCCCTGAGATTCCACCTCACACCAGTGAGAATGTCTAAGATCAAAAACTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
||
| 3UTR-3UTR CAA 90 bp | CTAAGGATGTTGAACATTTCTTTAGGTGTTTCTGAGCCCTTCCAGTTTCCTCAGAGATTCTGGATGGTTTaGTTCAATTCCTTCACCTGT | + |
|
Preference number: 3 (lower is better) Translates to: LRMLNISLGVSEPFQFPQRFWMV*FNSFTC Trigger: ACAGGTGAAGGAATTGAACAAAACCATCCAGAATCT...CTGAGGAAACTGGAAGGGCTCAGAAACACCTAAAGAAATGTTCAACATCCTTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
||
| 3UTR-3UTR CAA 90 bp | AAGCACTTTCTGGCATCCACAATATCATCTGGGTTTGGTGGCTGTATATGGGATTGTCCTTATTACATTTaGGAGCATCTTCTGGGTATA | + |
|
Preference number: 3 (lower is better) Translates to: KHFLASTISSGFGGCIWDCPYYI*EHLLGI Trigger: TATACCCAGAAGATGCTCCAAAATGTAATAAGGACA...ATCCCATATACAGCCACCAAACCCAGATGATATTGTGGATGCCAGAAAGTGCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
||
| 3UTR-3UTR CAA 90 bp | TTTAGATTCTGGATGGTTTTGTTCAATTCCTTCACCTGTTTGGTTGTGTTTTCCCTTGTGTTCTTGCTGTaGCCTCATGTGATTTGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: FRFWMVLFNSFTCLVVFSLVFLL*PHVIWF Trigger: GAACCAAATCACATGAGGCAACAGCAAGAACACAAG...GGAAAACACAACCAAACAGGTGAAGGAATTGAACAAAACCATCCAGAATCTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
||
| 3UTR CCA 72 bp | TTCTCTTCTATTAGTTTCAGTGTGTCTGGTTTGATGTaGAAGTCCTTGATCCACTTGGACTTGAGATTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: FSSISFSVSGLM*KSLIHLDLRFV Trigger: TACAAATCTCAAGTCCAAGTGGATCAAGGACTTCCACATCAAACCAGACACACTGAAACTAATAGAAGAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
||
| 3UTR TCA 72 bp | GTAAATGTACCACATTTTCTGTATCCATTCCTTTGTTaGGGAAAATTTGGGTTCTTTCCAGCTTCTGACTAT | + |
|
Preference number: 3 (lower is better) Translates to: VNVPHFLYPFLC*GKFGFFPASDY Trigger: ATAGTCAGAAGCTGGAAAGAACCCAAATTTTCCTCAACAAAGGAATGGATACAGAAAATGTGGTACATTTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
||
| 3UTR TCA 72 bp | CCTTGCTTCTTCTTAGGCTTCATATGGTCTGTGAATTaGAATTTTGGATATTCTGACTTTTGGGCTAATATC | + |
|
Preference number: 3 (lower is better) Translates to: PCFFLGFIWSVN*NFGYSDFWANI Trigger: GATATTAGCCCAAAAGTCAGAATATCCAAAATTTCAATTCACAGACCATATGAAGCCTAAGAAGAAGCAAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
||
| 3UTR CAA 72 bp | GTTGGTGGTCCAGTCCTCAGGCACTCTGGGGGCCTGTaGACATTGTTGCTCCCTGCGTGGGGTGCAAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: VGGPVLRHSGGL*TLLLPAWGANP Trigger: GGGGTTTGCACCCCACGCAGGGAGCAACAATGTCAACAGGCCCCCAGAGTGCCTGAGGACTGGACCACCAAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
||
| 3UTR CAA 72 bp | TGCGGCCTGCACCCTGGGTCCCTCCATGTGTATTCTTaGGTTGGTGGTCCAGTCCTCAGGCACTCTGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CGLHPGSLHVYS*VGGPVLRHSGG Trigger: GCCCCCAGAGTGCCTGAGGACTGGACCACCAACCAAAGAATACACATGGAGGGACCCAGGGTGCAGGCCGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
||
| CDS-3UTR GCA 90 bp | GGATGGATTCCCAGGTGGGGCAGTCCCGGGATGGCTTTTCCTTCAGTCTCTGTTGCCTCCCTGGGTGTTTaGAAACGCGGAGATGTACTC | + |
|
Preference number: 4 (lower is better) Translates to: GWIPRWGSPGMAFPSVSVASLGV*KRGDVL Trigger: GAGTACATCTCCGCGTTTGCAAACACCCAGGGAGGC...AACAGAGACTGAAGGAAAAGCCATCCCGGGACTGCCCCACCTGGGAATCCATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
||
| CDS-3UTR GCA 90 bp | GAAGTGGTGGACTTACCTGCGCTCACAGGCTTGTCCACACTTGTGGGAGGCCAGACAATCACAAGGGCCTaGAGCAAGCCCTGCATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: EVVDLPALTGLSTLVGGQTITRA*SKPCIS Trigger: GGAAATGCAGGGCTTGCTGCAGGCCCTTGTGATTGT...CTGGCCTCCCACAAGTGTGGACAAGCCTGTGAGCGCAGGTAAGTCCACCACTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR GCA 90 bp | GAAGTGGTGGACTTACCTGCGCTCACAGGCTTGTCCACACTTGTGGGAGGCCAGGCCACCATTGAGCTCTaGCCCTCAGGAGTTGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: EVVDLPALTGLSTLVGGQATIEL*PSGVER Trigger: TCTTTCAACTCCTGAGGGGCAGAGCTCAATGGTGGC...CTGGCCTCCCACAAGTGTGGACAAGCCTGTGAGCGCAGGTAAGTCCACCACTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR GCA 90 bp | GATTGGAGCGCTGTGGCACAAAATCAGCTCCAGGCGCAGACCCCAGTGCTACTTCAACATCCACCATCATaGGTACCCATTCCTCGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: DWSAVAQNQLQAQTPVLLQHPPS*VPIPRC Trigger: ACACCGAGGAATGGGTACGCATGATGGTGGATGTTG...AAGTAGCACTGGGGTCTGCGCCTGGAGCTGATTTTGTGCCACAGCGCTCCAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR GCA 90 bp | GAAGTGGTGGACTTACCTGCGCTCACAGGCTTGTCCACACTTGTGGGAGGCCAGTTGTGGGAAATGGGCTaGTCAGTTGCAATGGGATTG | + |
|
Preference number: 4 (lower is better) Translates to: EVVDLPALTGLSTLVGGQLWEMG*SVAMGL Trigger: CAATCCCATTGCAACTGAGCAGCCCATTTCCCACAA...CTGGCCTCCCACAAGTGTGGACAAGCCTGTGAGCGCAGGTAAGTCCACCACTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR TCA 90 bp | GAAGTGGTGGACTTACCTGCGCTCACAGGCTTGTCCACACTTGTGGGAGGCCAGCTTCTCCTGCATAGATaGTCAAATCTGGGTAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: EVVDLPALTGLSTLVGGQLLLHR*SNLGKT Trigger: GGTCTTACCCAGATTTGATCATCTATGCAGGAGAAG...CTGGCCTCCCACAAGTGTGGACAAGCCTGTGAGCGCAGGTAAGTCCACCACTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR GCA 90 bp | TGGGTTTGGTGGCTGTATATGGGATGGATTCCCAGGTGGGGCAGTCCCGGGATGCATTTCCTGGATGTTTaGAAGGTTATAGGAGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: WVWWLYMGWIPRWGSPGMHFLDV*KVIGAW Trigger: CCAAGCTCCTATAACCTTGCAAACATCCAGGAAATG...CATCCCGGGACTGCCCCACCTGGGAATCCATCCCATATACAGCCACCAAACCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
||
| CDS-3UTR GCA 90 bp | AAGTGGTGGACTTACCTGCGCTCACAGGCTTGTCCACACTTGTGGGAGGCCAGTATACAGATGTTTCATTaGTCTGGAAGCCAGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KWWTYLRSQACPHLWEASIQMFH*SGSQAE Trigger: CTCTGCCTGGCTTCCAGAGCAATGAAACATCTGTAT...ACTGGCCTCCCACAAGTGTGGACAAGCCTGTGAGCGCAGGTAAGTCCACCACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR TCA 90 bp | GCGCTGTGGCACAAAATCAGCTCCAGGCGCAGACCCCAGTGCTACTTAATATTAGCAGAGCATCACAGATaGCTTCCTGCTTCTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ALWHKISSRRRPQCYLILAEHHR*LPASLP Trigger: TGGAAGAGAAGCAGGAAGTCATCTGTGATGCTCTGC...TAATATTAAGTAGCACTGGGGTCTGCGCCTGGAGCTGATTTTGTGCCACAGCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR TCA 90 bp | AAGTGGTGGACTTACCTGCGCTCACAGGCTTGTCCACACTTGTGGGAGGCCAGTCAGTTGCAATGGGATTaGTACCAAACACAATGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KWWTYLRSQACPHLWEASQLQWD*YQTQCF Trigger: GAAGCATTGTGTTTGGTATCAATCCCATTGCAACTG...ACTGGCCTCCCACAAGTGTGGACAAGCCTGTGAGCGCAGGTAAGTCCACCACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR TCA 90 bp | TGTCATGTGTACATTGCCTTGCCAGTCTTCTCTCCAGCTTTGTTTTCAGCCTCATCAGCATGCCACCATTaGGCTCTGCCCCTCAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: CHVYIALPVFSPALFSASSACHH*ALPLRS Trigger: ACTCCTGAGGGGCAGAGCTCAATGGTGGCATGCTGA...TGAGGCTGAAAACAAAGCTGGAGAGAAGACTGGCAAGGCAATGTACACATGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR GCA 90 bp | AAGGGCCTCTCTTCATACCTGATGTCCAACAAGGCCAACCTCTGCCACATATGCCAACATCCACCATCATaGGTACCCATTCCTCGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KGLSSYLMSNKANLCHICQHPPS*VPIPRC Trigger: ACACCGAGGAATGGGTACGCATGATGGTGGATGTTG...GCATATGTGGCAGAGGTTGGCCTTGTTGGACATCAGGTATGAAGAGAGGCCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
||
| CDS-3UTR GCA 90 bp | TATTTAGGGATTGGAGCGCTGTGGCACAAAATCAGCTCCAGGCGCAGACCCCAGGTCATTCATGTGAGATaGTCTCCTCCTCTTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: YLGIGALWHKISSRRRPQVIHVR*SPPLPH Trigger: ATGAGGAAGAGGAGGAGAGCATCTCACATGAATGAC...CTGGGGTCTGCGCCTGGAGCTGATTTTGTGCCACAGCGCTCCAATCCCTAAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR CCA 90 bp | TGGGTTTGGTGGCTGTATATGGGATGGATTCCCAGGTGGGGCAGTCCCGGGATGGCACAAATAGTTCTCTaGTTTTGCGGAGACTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: WVWWLYMGWIPRWGSPGMAQIVL*FCGDFL Trigger: CAAAAAGTCTCCGCAAAACCAGAGAACTATTTGTGC...CATCCCGGGACTGCCCCACCTGGGAATCCATCCCATATACAGCCACCAAACCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
||
| CDS-3UTR CCA 90 bp | TGGGTTTGGTGGCTGTATATGGGATGGATTCCCAGGTGGGGCAGTCCCGGGATGTCAGTGCGGAAATTCTaGGCTTCATCAATAATGATG | + |
|
Preference number: 4 (lower is better) Translates to: WVWWLYMGWIPRWGSPGMSVRKF*ASSIMM Trigger: CATCATTATTGATGAAGCCCAGAATTTCCGCACTGA...CATCCCGGGACTGCCCCACCTGGGAATCCATCCCATATACAGCCACCAAACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
||
| CDS-3UTR CCA 90 bp | GAAGTGGTGGACTTACCTGCGCTCACAGGCTTGTCCACACTTGTGGGAGGCCAGTCAGTGCGGAAATTCTaGGCTTCATCAATAATGATG | + |
|
Preference number: 4 (lower is better) Translates to: EVVDLPALTGLSTLVGGQSVRKF*ASSIMM Trigger: CATCATTATTGATGAAGCCCAGAATTTCCGCACTGA...CTGGCCTCCCACAAGTGTGGACAAGCCTGTGAGCGCAGGTAAGTCCACCACTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR TCA 90 bp | ATGTGTACATTGCCTTGCCAGTCTTCTCTCCAGCTTTGTTTTCAGCCTCAGTTATCAGCATGCCACCATTaGGCTCTGCCCCTCAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: MCTLPCQSSLQLCFQPQLSACHH*ALPLRS Trigger: ACTCCTGAGGGGCAGAGCTCAATGGTGGCATGCTGA...TAACTGAGGCTGAAAACAAAGCTGGAGAGAAGACTGGCAAGGCAATGTACACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR GCA 90 bp | ATGTCATGTGTACATTGCCTTGCCAGTCTTCTCTCCAGCTTTGTTTTCAGCCTCGCCTCCCTGGGTGTTTaGAAACGCGGAGATGTACTC | + |
|
Preference number: 4 (lower is better) Translates to: MSCVHCLASLLSSFVFSLASLGV*KRGDVL Trigger: GAGTACATCTCCGCGTTTGCAAACACCCAGGGAGGC...GAGGCTGAAAACAAAGCTGGAGAGAAGACTGGCAAGGCAATGTACACATGACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR CCA 90 bp | GCTCACAGGCTTGTCCACACTTGTGGGAGGCCAGTTCTTTCCCAGTGGTATTTACAGAGCAATAGGTTGTaGGAAATGGGCTGCTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: AHRLVHTCGRPVLSQWYLQSNRL*EMGCSV Trigger: AACTGAGCAGCCCATTTCCCACAACCTATTGCTCTG...TAAATACCACTGGGAAAGAACTGGCCTCCCACAAGTGTGGACAAGCCTGTGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| 3UTR CAA 72 bp | GTAAGCACTTTCTGGCATCCACAATATCATCTGGGTTaGGTGGCTGTATATGGGATGGATTCCCAGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VSTFWHPQYHLG*VAVYGMDSQVG Trigger: CCCCACCTGGGAATCCATCCCATATACAGCCACCAAACCCAGATGATATTGTGGATGCCAGAAAGTGCTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
||
| CDS-3UTR TCA 90 bp | GATTGGAGCGCTGTGGCACAAAATCAGCTCCAGGCGCAGACCCCAGTGCTACTTTTCAAAAGCTGGATTTaGTTCAAGGCTTTTCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: DWSAVAQNQLQAQTPVLLFKSWI*FKAFLT Trigger: AGTCAGAAAAGCCTTGAATCAAATCCAGCTTTTGAA...AAGTAGCACTGGGGTCTGCGCCTGGAGCTGATTTTGTGCCACAGCGCTCCAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR TCA 90 bp | AAGTGGTGGACTTACCTGCGCTCACAGGCTTGTCCACACTTGTGGGAGGCCAGTTACAAATTTCCCTCTTaGAACACATCTATGACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KWWTYLRSQACPHLWEASYKFPS*NTSMTL Trigger: CAGAGTCATAGATGTGTTTCAAGAGGGAAATTTGTA...ACTGGCCTCCCACAAGTGTGGACAAGCCTGTGAGCGCAGGTAAGTCCACCACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR TCA 90 bp | GGCATCCACAATATCATCTGGGTTTGGTGGCTGTATATGGGATGGATTCCCAGGGTCTTGTTATTGTTCTaGGAGCTCAGGCAGAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: GIHNIIWVWWLYMGWIPRVLLLF*ELRQRT Trigger: GGTTCTCTGCCTGAGCTCTCAGAACAATAACAAGAC...CCTGGGAATCCATCCCATATACAGCCACCAAACCCAGATGATATTGTGGATGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
||
| CDS-3UTR GCA 90 bp | TGTCATGTGTACATTGCCTTGCCAGTCTTCTCTCCAGCTTTGTTTTCAGCCTCAGCCTGCAGCAAGCCCTaGATTTCCTGGATGTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: CHVYIALPVFSPALFSASACSKP*ISWMFA Trigger: TGCAAACATCCAGGAAATGCAGGGCTTGCTGCAGGC...TGAGGCTGAAAACAAAGCTGGAGAGAAGACTGGCAAGGCAATGTACACATGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR GCA 90 bp | TTTAGGGATTGGAGCGCTGTGGCACAAAATCAGCTCCAGGCGCAGACCCCAGTGATAGTTCTCTGGTTTTaGGGAGACTTTTTGAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: FRDWSAVAQNQLQAQTPVIVLWF*GDFLRV Trigger: TACTCTCAAAAAGTCTCCGCAAAACCAGAGAACTAT...CACTGGGGTCTGCGCCTGGAGCTGATTTTGTGCCACAGCGCTCCAATCCCTAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR CCA 90 bp | CTGATGATGCCAAGTGGCCTTGGTATCTGTTGCTTGTGTTCTTGCTGTTGCCTCATAGGTTGTGGGAAATaGGCTGCTCAGTTGCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: LMMPSGLGICCLCSCCCLIGCGK*AAQLQW Trigger: CCATTGCAACTGAGCAGCCCATTTCCCACAACCTAT...GAGGCAACAGCAAGAACACAAGCAACAGATACCAAGGCCACTTGGCATCATCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| 3UTR CAA 72 bp | GTCCCTTCTAAAACTCCTCCTTGCTCAGTCCAATGGTaGGCTCCAATCTTCCTCCTCTGTATTTGTCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VPSKTPPCSVQW*APIFLLCICQA Trigger: AGCCTGACAAATACAGAGGAGGAAGATTGGAGCCAACCATTGGACTGAGCAAGGAGGAGTTTTAGAAGGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
||
| CDS-3UTR TCA 90 bp | GGTTCTGATGATGCCAAGTGGCCTTGGTATCTGTTGCTTGTGTTCTTGCTGTTGGTCTTGTTATTGTTCTaGGAGCTCAGGCAGAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: GSDDAKWPWYLLLVFLLLVLLLF*ELRQRT Trigger: GGTTCTCTGCCTGAGCTCTCAGAACAATAACAAGAC...CAACAGCAAGAACACAAGCAACAGATACCAAGGCCACTTGGCATCATCAGAACC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR GCA 90 bp | TTTAGGGATTGGAGCGCTGTGGCACAAAATCAGCTCCAGGCGCAGACCCCAGTGGGATATTGCTTCATTTaGCACAATTTTCAAAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: FRDWSAVAQNQLQAQTPVGYCFI*HNFQRV Trigger: GACTCTTTGAAAATTGTGGCAAATGAAGCAATATCC...CACTGGGGTCTGCGCCTGGAGCTGATTTTGTGCCACAGCGCTCCAATCCCTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR GCA 90 bp | TATTTAGGGATTGGAGCGCTGTGGCACAAAATCAGCTCCAGGCGCAGACCCCAGATAGTTCTCTGGTTTTaGGGAGACTTTTTGAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: YLGIGALWHKISSRRRPQIVLWF*GDFLRV Trigger: TACTCTCAAAAAGTCTCCGCAAAACCAGAGAACTAT...CTGGGGTCTGCGCCTGGAGCTGATTTTGTGCCACAGCGCTCCAATCCCTAAATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR GCA 90 bp | AAGGGCCTCTCTTCATACCTGATGTCCAACAAGGCCAACCTCTGCCACATATGCTCGAGTGATTCCTTTTaGCTTCTCATACCAGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KGLSSYLMSNKANLCHICSSDSF*LLIPVS Trigger: GGAAACTGGTATGAGAAGGCAAAAGGAATCACTCGA...GCATATGTGGCAGAGGTTGGCCTTGTTGGACATCAGGTATGAAGAGAGGCCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
||
| CDS-3UTR GCA 90 bp | GCGCTGTGGCACAAAATCAGCTCCAGGCGCAGACCCCAGTGCTACTTAATATTATCGAGTGATTCCTTTTaGCTTCTCATACCAGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ALWHKISSRRRPQCYLILSSDSF*LLIPVS Trigger: GGAAACTGGTATGAGAAGGCAAAAGGAATCACTCGA...TAATATTAAGTAGCACTGGGGTCTGCGCCTGGAGCTGATTTTGTGCCACAGCGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR CCA 90 bp | GCGCTGTGGCACAAAATCAGCTCCAGGCGCAGACCCCAGTGCTACTTAATATTATCAGGTTGCTCACTCTaGTTGGCCATTTGTATAACA | + |
|
Preference number: 4 (lower is better) Translates to: ALWHKISSRRRPQCYLILSGCSL*LAICIT Trigger: TGTTATACAAATGGCCAACCAGAGTGAGCAACCTGA...TAATATTAAGTAGCACTGGGGTCTGCGCCTGGAGCTGATTTTGTGCCACAGCGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR CCA 90 bp | AAGTGGTGGACTTACCTGCGCTCACAGGCTTGTCCACACTTGTGGGAGGCCAGTCTATCTGTTTCACAGTaGAATGTGTTTCTGATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KWWTYLRSQACPHLWEASLSVSQ*NVFLIF Trigger: AAAGATCAGAAACACATTCCACTGTGAAACAGATAG...ACTGGCCTCCCACAAGTGTGGACAAGCCTGTGAGCGCAGGTAAGTCCACCACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR CCA 90 bp | TTTAGGGATTGGAGCGCTGTGGCACAAAATCAGCTCCAGGCGCAGACCCCAGTGCTATCTGTTTCACAGTaGAATGTGTTTCTGATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FRDWSAVAQNQLQAQTPVLSVSQ*NVFLIF Trigger: AAAGATCAGAAACACATTCCACTGTGAAACAGATAG...CACTGGGGTCTGCGCCTGGAGCTGATTTTGTGCCACAGCGCTCCAATCCCTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR CCA 90 bp | GCTCACAGGCTTGTCCACACTTGTGGGAGGCCAGTTCTTTCCCAGTGGTATTTATCTCCTGCAAGTGACTaGTCTGAAAATAGTCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: AHRLVHTCGRPVLSQWYLSPASD*SENSPE Trigger: TTCTGGACTATTTTCAGACCAGTCACTTGCAGGAGA...TAAATACCACTGGGAAAGAACTGGCCTCCCACAAGTGTGGACAAGCCTGTGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR CCA 90 bp | CCTTGCTCAGTCCAATGGTTGGCTCCAATCTTCCTCCTCTGTATTTGTCAGGCTTCTTCCTTTGGATACTaGAGTGAGAAATCTGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PCSVQWLAPIFLLCICQASSFGY*SEKSGR Trigger: CCTCCCAGATTTCTCACTCCAGTATCCAAAGGAAGA...AGCCTGACAAATACAGAGGAGGAAGATTGGAGCCAACCATTGGACTGAGCAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
||
| CDS-3UTR CCA 90 bp | TCTGATGATGCCAAGTGGCCTTGGTATCTGTTGCTTGTGTTCTTGCTGTTGCCTATAGGTTGTGGGAAATaGGCTGCTCAGTTGCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: SDDAKWPWYLLLVFLLLPIGCGK*AAQLQW Trigger: CCATTGCAACTGAGCAGCCCATTTCCCACAACCTAT...AGGCAACAGCAAGAACACAAGCAACAGATACCAAGGCCACTTGGCATCATCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR TCA 90 bp | GCTCACAGGCTTGTCCACACTTGTGGGAGGCCAGTTCTTTCCCAGTGGTATTTAGTAAAATGCATCTCTTaGATCCATGGCAACCTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: AHRLVHTCGRPVLSQWYLVKCIS*IHGNLR Trigger: TCTAAGGTTGCCATGGATTCAAGAGATGCATTTTAC...TAAATACCACTGGGAAAGAACTGGCCTCCCACAAGTGTGGACAAGCCTGTGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR TCA 90 bp | GCGCTGTGGCACAAAATCAGCTCCAGGCGCAGACCCCAGTGCTACTTAATATTATCGGATAGACTCAGCTaGCATTCAAAATCTCTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: ALWHKISSRRRPQCYLILSDRLS*HSKSLD Trigger: ATCTAGAGATTTTGAATGTCAGCTGAGTCTATCCGA...TAATATTAAGTAGCACTGGGGTCTGCGCCTGGAGCTGATTTTGTGCCACAGCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR TCA 90 bp | AGTTGTCTTCATCTCTGGTTTCAGTCCTTATGGTCTCAACGTTCCCATAGCCTAGCAGAGCATCACAGATaGCTTCCTGCTTCTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SCLHLWFQSLWSQRSHSLAEHHR*LPASLP Trigger: TGGAAGAGAAGCAGGAAGTCATCTGTGATGCTCTGC...TAGGCTATGGGAACGTTGAGACCATAAGGACTGAAACCAGAGATGAAGACAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR GCA 90 bp | ACACTCAGGCCCAAGGGCCTCTCTTCATACCTGATGTCCAACAAGGCCAACCTCGAGAAAGAACGTATTTaGTGCTTTACTAAATCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TLRPKGLSSYLMSNKANLEKERI*CFTKSS Trigger: AGAGGATTTAGTAAAGCAGCAAATACGTTCTTTCTC...GAGGTTGGCCTTGTTGGACATCAGGTATGAAGAGAGGCCCTTGGGCCTGAGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
||
| CDS-3UTR GCA 90 bp | CTGATGATGCCAAGTGGCCTTGGTATCTGTTGCTTGTGTTCTTGCTGTTGCCTCCATTTCCTGGATGTTTaGAAGGTTATAGGAGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LMMPSGLGICCLCSCCCLHFLDV*KVIGAW Trigger: CCAAGCTCCTATAACCTTGCAAACATCCAGGAAATG...GAGGCAACAGCAAGAACACAAGCAACAGATACCAAGGCCACTTGGCATCATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR GCA 90 bp | CTAAGGATGTTGAACATTTCTTTAGGTGTTTCTGAGCCCTTCCAGTTTCCTCAGACAATCACAAGGGCCTaGAGCAAGCCCTGCATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LRMLNISLGVSEPFQFPQTITRA*SKPCIS Trigger: GGAAATGCAGGGCTTGCTGCAGGCCCTTGTGATTGT...CTGAGGAAACTGGAAGGGCTCAGAAACACCTAAAGAAATGTTCAACATCCTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
||
| CDS-3UTR GCA 90 bp | TGGGTTCTGATGATGCCAAGTGGCCTTGGTATCTGTTGCTTGTGTTCTTGCTGTGTCATTCATGTGAGATaGTCTCCTCCTCTTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: WVLMMPSGLGICCLCSCCVIHVR*SPPLPH Trigger: ATGAGGAAGAGGAGGAGAGCATCTCACATGAATGAC...ACAGCAAGAACACAAGCAACAGATACCAAGGCCACTTGGCATCATCAGAACCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR CCA 90 bp | ATGTGTACATTGCCTTGCCAGTCTTCTCTCCAGCTTTGTTTTCAGCCTCAGTTAGGGAATTTTAGCAGGTaGAGCTCTGTCATCAGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: MCTLPCQSSLQLCFQPQLGNFSR*SSVISR Trigger: CCGACTGATGACAGAGCTCCACCTGCTAAAATTCCC...TAACTGAGGCTGAAAACAAAGCTGGAGAGAAGACTGGCAAGGCAATGTACACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR CCA 90 bp | GCTCACAGGCTTGTCCACACTTGTGGGAGGCCAGTTCTTTCCCAGTGGTATTTAGCACAAATAGTTCTCTaGTTTTGCGGAGACTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: AHRLVHTCGRPVLSQWYLAQIVL*FCGDFL Trigger: CAAAAAGTCTCCGCAAAACCAGAGAACTATTTGTGC...TAAATACCACTGGGAAAGAACTGGCCTCCCACAAGTGTGGACAAGCCTGTGAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR CCA 90 bp | CCTCTCAGGAGACAGCCATATCAGGCTTCCATCAGTAAGCACTTTCTGGCATCCGATGAAGTCCCTCAATaGCTGATTTTCACAGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: PLRRQPYQASISKHFLASDEVPQ*LIFTDV Trigger: TACATCTGTGAAAATCAGCCATTGAGGGACTTCATC...GGATGCCAGAAAGTGCTTACTGATGGAAGCCTGATATGGCTGTCTCCTGAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
||
| 3UTR CAA 72 bp | CAACGTTCCCATAGCCTATGTCATGTGTACATTGCCTaGCCAGTCTTCTCTCCAGCTTTGTTTTCAGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QRSHSLCHVYIA*PVFSPALFSAS Trigger: TGAGGCTGAAAACAAAGCTGGAGAGAAGACTGGCAAGGCAATGTACACATGACATAGGCTATGGGAACGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| 3UTR CAA 72 bp | GATGCCAAGTGGCCTTGGTATCTGTTGCTTGTGTTCTaGCTGTTGCCTCATGTGATTTGGTTCCTGTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: DAKWPWYLLLVF*LLPHVIWFLCS Trigger: AGAACACAGGAACCAAATCACATGAGGCAACAGCAAGAACACAAGCAACAGATACCAAGGCCACTTGGCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR TCA 90 bp | AAGGGCCTCTCTTCATACCTGATGTCCAACAAGGCCAACCTCTGCCACATATGCTACAAATTTCCCTCTTaGAACACATCTATGACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KGLSSYLMSNKANLCHICYKFPS*NTSMTL Trigger: CAGAGTCATAGATGTGTTTCAAGAGGGAAATTTGTA...GCATATGTGGCAGAGGTTGGCCTTGTTGGACATCAGGTATGAAGAGAGGCCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
||
| CDS-3UTR TCA 90 bp | GGCATCCACAATATCATCTGGGTTTGGTGGCTGTATATGGGATGGATTCCCAGGTCAAACATGTTAGAATaGCAGACAGACTCGTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: GIHNIIWVWWLYMGWIPRSNMLE*QTDSSF Trigger: GAATGACGAGTCTGTCTGTCATTCTAACATGTTTGA...CCTGGGAATCCATCCCATATACAGCCACCAAACCCAGATGATATTGTGGATGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
||
| CDS-3UTR GCA 90 bp | CTGATGATGCCAAGTGGCCTTGGTATCTGTTGCTTGTGTTCTTGCTGTTGCCTCTGTGCTGAAAAGCACTaGAATATCTTGGGGAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: LMMPSGLGICCLCSCCCLCAEKH*NILGRI Trigger: TATTCTCCCCAAGATATTGCAGTGCTTTTCAGCACA...GAGGCAACAGCAAGAACACAAGCAACAGATACCAAGGCCACTTGGCATCATCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR GCA 90 bp | ATGTGTACATTGCCTTGCCAGTCTTCTCTCCAGCTTTGTTTTCAGCCTCAGTTATTGTGGGAAATGGGCTaGTCAGTTGCAATGGGATTG | + |
|
Preference number: 4 (lower is better) Translates to: MCTLPCQSSLQLCFQPQLLWEMG*SVAMGL Trigger: CAATCCCATTGCAACTGAGCAGCCCATTTCCCACAA...TAACTGAGGCTGAAAACAAAGCTGGAGAGAAGACTGGCAAGGCAATGTACACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR CCA 90 bp | CCTTGCTCAGTCCAATGGTTGGCTCCAATCTTCCTCCTCTGTATTTGTCAGGCTAAGGTTATAGGAGCTTaGGTAATCAATAGGAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: PCSVQWLAPIFLLCICQAKVIGA*VINRRD Trigger: GTCTCTCCTATTGATTACCCAAGCTCCTATAACCTT...AGCCTGACAAATACAGAGGAGGAAGATTGGAGCCAACCATTGGACTGAGCAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
||
| CDS-3UTR CCA 90 bp | CTGATGATGCCAAGTGGCCTTGGTATCTGTTGCTTGTGTTCTTGCTGTTGCCTCAAGGTTATAGGAGCTTaGGTAATCAATAGGAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LMMPSGLGICCLCSCCCLKVIGA*VINRRD Trigger: GTCTCTCCTATTGATTACCCAAGCTCCTATAACCTT...GAGGCAACAGCAAGAACACAAGCAACAGATACCAAGGCCACTTGGCATCATCAG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| 3UTR CAA 72 bp | AAGTGGCCTTGGTATCTGTTGCTTGTGTTCTTGCTGTaGCCTCATGTGATTTGGTTCCTGTGTTCTGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: KWPWYLLLVFLL*PHVIWFLCSES Trigger: ACTCTCAGAACACAGGAACCAAATCACATGAGGCAACAGCAAGAACACAAGCAACAGATACCAAGGCCACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR TCA 90 bp | CTAAGGATGTTGAACATTTCTTTAGGTGTTTCTGAGCCCTTCCAGTTTCCTCAGTTGGGCATCCCAGGATaGTACTCTTATCATCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: LRMLNISLGVSEPFQFPQLGIPG*YSYHPL Trigger: GAGTGGATGATAAGAGTATCATCCTGGGATGCCCAA...CTGAGGAAACTGGAAGGGCTCAGAAACACCTAAAGAAATGTTCAACATCCTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
||
| CDS-3UTR TCA 90 bp | TCTGATGATGCCAAGTGGCCTTGGTATCTGTTGCTTGTGTTCTTGCTGTTGCCTTCGGATAGACTCAGCTaGCATTCAAAATCTCTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SDDAKWPWYLLLVFLLLPSDRLS*HSKSLD Trigger: ATCTAGAGATTTTGAATGTCAGCTGAGTCTATCCGA...AGGCAACAGCAAGAACACAAGCAACAGATACCAAGGCCACTTGGCATCATCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR TCA 90 bp | ATGTCATGTGTACATTGCCTTGCCAGTCTTCTCTCCAGCTTTGTTTTCAGCCTCCAGTTGCAATGGGATTaGTACCAAACACAATGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: MSCVHCLASLLSSFVFSLQLQWD*YQTQCF Trigger: GAAGCATTGTGTTTGGTATCAATCCCATTGCAACTG...GAGGCTGAAAACAAAGCTGGAGAGAAGACTGGCAAGGCAATGTACACATGACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR GCA 90 bp | ATGTCATGTGTACATTGCCTTGCCAGTCTTCTCTCCAGCTTTGTTTTCAGCCTCAACTTATCCTCCTGTTaGTTGGTCTCAAAGAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: MSCVHCLASLLSSFVFSLNLSSC*LVSKKA Trigger: GGCTTTCTTTGAGACCAAGCAACAGGAGGATAAGTT...GAGGCTGAAAACAAAGCTGGAGAGAAGACTGGCAAGGCAATGTACACATGACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR GCA 90 bp | CTTTATCTTTCTTCTTGTCCCGAAGGACCTCAACTCGATTTAACTTTCTCATCAGCCTGCAGCAAGCCCTaGATTTCCTGGATGTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LYLSSCPEGPQLDLTFSSACSKP*ISWMFA Trigger: TGCAAACATCCAGGAAATGCAGGGCTTGCTGCAGGC...TGATGAGAAAGTTAAATCGAGTTGAGGTCCTTCGGGACAAGAAGAAAGATAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR CCA 90 bp | CTAAGGATGTTGAACATTTCTTTAGGTGTTTCTGAGCCCTTCCAGTTTCCTCAGAGACTGAGCCCCCACTaGTCTTGTTATTGTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LRMLNISLGVSEPFQFPQRLSPH*SCYCSE Trigger: CTCAGAACAATAACAAGACCAGTGGGGGCTCAGTCT...CTGAGGAAACTGGAAGGGCTCAGAAACACCTAAAGAAATGTTCAACATCCTTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
||
| CDS-3UTR CCA 90 bp | GCTCACAGGCTTGTCCACACTTGTGGGAGGCCAGTTCTTTCCCAGTGGTATTTAGACCACTTAAATTCATaGAGAATATTTAGGGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: AHRLVHTCGRPVLSQWYLDHLNS*RIFRDS Trigger: AGAGTCCCTAAATATTCTCCATGAATTTAAGTGGTC...TAAATACCACTGGGAAAGAACTGGCCTCCCACAAGTGTGGACAAGCCTGTGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| 3UTR CAA 72 bp | AACCACCAGACTGATTTCCAGAGTGGTTGTACCAGTTaGCAATCTCACCAGCAATGGAGTAGTATTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NHQTDFQSGCTS*QSHQQWSSIPF Trigger: GAAAGGAATACTACTCCATTGCTGGTGAGATTGCAAACTGGTACAACCACTCTGGAAATCAGTCTGGTGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
||
| CDS-3UTR TCA 90 bp | ATGTCATGTGTACATTGCCTTGCCAGTCTTCTCTCCAGCTTTGTTTTCAGCCTCGTAAAATGCATCTCTTaGATCCATGGCAACCTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: MSCVHCLASLLSSFVFSLVKCIS*IHGNLR Trigger: TCTAAGGTTGCCATGGATTCAAGAGATGCATTTTAC...GAGGCTGAAAACAAAGCTGGAGAGAAGACTGGCAAGGCAATGTACACATGACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR GCA 90 bp | AACAAGGTTTTGTTATATCTTTATCTTTCTTCTTGTCCCGAAGGACCTCAACTCGCCACCATTGAGCTCTaGCCCTCAGGAGTTGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: NKVLLYLYLSSCPEGPQLATIEL*PSGVER Trigger: TCTTTCAACTCCTGAGGGGCAGAGCTCAATGGTGGC...GAGTTGAGGTCCTTCGGGACAAGAAGAAAGATAAAGATATAACAAAACCTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR CCA 90 bp | ATGTCATGTGTACATTGCCTTGCCAGTCTTCTCTCCAGCTTTGTTTTCAGCCTCGATGAAGTCCCTCAATaGCTGATTTTCACAGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: MSCVHCLASLLSSFVFSLDEVPQ*LIFTDV Trigger: TACATCTGTGAAAATCAGCCATTGAGGGACTTCATC...GAGGCTGAAAACAAAGCTGGAGAGAAGACTGGCAAGGCAATGTACACATGACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| 3UTR CAA 72 bp | AGTGTGTCTGGTTTGATGTGGAAGTCCTTGATCCACTaGGACTTGAGATTTGTACAGGGAGATAAGAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: SVSGLMWKSLIH*DLRFVQGDKNG Trigger: TCCATTCTTATCTCCCTGTACAAATCTCAAGTCCAAGTGGATCAAGGACTTCCACATCAAACCAGACACACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
||
| CDS-3UTR TCA 90 bp | CTTTATCTTTCTTCTTGTCCCGAAGGACCTCAACTCGATTTAACTTTCTCATCATTGGGCATCCCAGGATaGTACTCTTATCATCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: LYLSSCPEGPQLDLTFSSLGIPG*YSYHPL Trigger: GAGTGGATGATAAGAGTATCATCCTGGGATGCCCAA...TGATGAGAAAGTTAAATCGAGTTGAGGTCCTTCGGGACAAGAAGAAAGATAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR TCA 90 bp | TTTCTGAGGAACCACCAGACTGATTTCCAGAGTGGTTGTACCAGTTTGCAATCTAGAATGGCTCTACTTTaGTCACACAGAGATAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: FLRNHQTDFQSGCTSLQSRMALL*SHRDNH Trigger: ATGGTTATCTCTGTGTGATCAAAGTAGAGCCATTCT...AGATTGCAAACTGGTACAACCACTCTGGAAATCAGTCTGGTGGTTCCTCAGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
||
| CDS-3UTR TCA 90 bp | AACAAGGTTTTGTTATATCTTTATCTTTCTTCTTGTCCCGAAGGACCTCAACTCGACTCGTCATTCATGTaGGATGCTCTCCTCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NKVLLYLYLSSCPEGPQLDSSFM*DALLLF Trigger: GAAGAGGAGGAGAGCATCTCACATGAATGACGAGTC...GAGTTGAGGTCCTTCGGGACAAGAAGAAAGATAAAGATATAACAAAACCTTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR GCA 90 bp | GTCTCTGTTCCCTACTTTGTCTTCATAGTTTCTCCTGTAAGTAATAGGTTCACCATACAGATGTTTCATTaGTCTGGAAGCCAGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VSVPYFVFIVSPVSNRFTIQMFH*SGSQAE Trigger: CTCTGCCTGGCTTCCAGAGCAATGAAACATCTGTAT...GGTGAACCTATTACTTACAGGAGAAACTATGAAGACAAAGTAGGGAACAGAGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
||
| CDS-3UTR CCA 90 bp | TTTAGATTCTGGATGGTTTTGTTCAATTCCTTCACCTGTTTGGTTGTGTTTTCCGGGAATTTTAGCAGGTaGAGCTCTGTCATCAGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: FRFWMVLFNSFTCLVVFSGNFSR*SSVISR Trigger: CCGACTGATGACAGAGCTCCACCTGCTAAAATTCCC...GGAAAACACAACCAAACAGGTGAAGGAATTGAACAAAACCATCCAGAATCTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
||
| 3UTR CAA 72 bp | CATGTGTACATTGCCTTGCCAGTCTTCTCTCCAGCTTaGTTTTCAGCCTCAGTTAGTTACGATATACACATT | + |
|
Preference number: 4 (lower is better) Translates to: HVYIALPVFSPA*FSASVSYDIHI Trigger: AATGTGTATATCGTAACTAACTGAGGCTGAAAACAAAGCTGGAGAGAAGACTGGCAAGGCAATGTACACATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR TCA 90 bp | TTATATCTTTATCTTTCTTCTTGTCCCGAAGGACCTCAACTCGATTTAACTTTCGACTCGTCATTCATGTaGGATGCTCTCCTCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LYLYLSSCPEGPQLDLTFDSSFM*DALLLF Trigger: GAAGAGGAGGAGAGCATCTCACATGAATGACGAGTC...GAAAGTTAAATCGAGTTGAGGTCCTTCGGGACAAGAAGAAAGATAAAGATATAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR GCA 90 bp | GTCTCTGTTCCCTACTTTGTCTTCATAGTTTCTCCTGTAAGTAATAGGTTCACCAACTTATCCTCCTGTTaGTTGGTCTCAAAGAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VSVPYFVFIVSPVSNRFTNLSSC*LVSKKA Trigger: GGCTTTCTTTGAGACCAAGCAACAGGAGGATAAGTT...GGTGAACCTATTACTTACAGGAGAAACTATGAAGACAAAGTAGGGAACAGAGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
||
| CDS-3UTR GCA 90 bp | TGTCATGTGTACATTGCCTTGCCAGTCTTCTCTCCAGCTTTGTTTTCAGCCTCAGAGAAAGAACGTATTTaGTGCTTTACTAAATCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CHVYIALPVFSPALFSASEKERI*CFTKSS Trigger: AGAGGATTTAGTAAAGCAGCAAATACGTTCTTTCTC...TGAGGCTGAAAACAAAGCTGGAGAGAAGACTGGCAAGGCAATGTACACATGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR CCA 90 bp | CTTTATCTTTCTTCTTGTCCCGAAGGACCTCAACTCGATTTAACTTTCTCATCATCTTCCTTTGGATACTaGAGTGAGAAATCTGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LYLSSCPEGPQLDLTFSSSSFGY*SEKSGR Trigger: CCTCCCAGATTTCTCACTCCAGTATCCAAAGGAAGA...TGATGAGAAAGTTAAATCGAGTTGAGGTCCTTCGGGACAAGAAGAAAGATAAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR CCA 90 bp | CTTTATCTTTCTTCTTGTCCCGAAGGACCTCAACTCGATTTAACTTTCTCATCATCAGGTTGCTCACTCTaGTTGGCCATTTGTATAACA | + |
|
Preference number: 4 (lower is better) Translates to: LYLSSCPEGPQLDLTFSSSGCSL*LAICIT Trigger: TGTTATACAAATGGCCAACCAGAGTGAGCAACCTGA...TGATGAGAAAGTTAAATCGAGTTGAGGTCCTTCGGGACAAGAAGAAAGATAAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR CCA 90 bp | CTTTATCTTTCTTCTTGTCCCGAAGGACCTCAACTCGATTTAACTTTCTCATCATCTCCTGCAAGTGACTaGTCTGAAAATAGTCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LYLSSCPEGPQLDLTFSSSPASD*SENSPE Trigger: TTCTGGACTATTTTCAGACCAGTCACTTGCAGGAGA...TGATGAGAAAGTTAAATCGAGTTGAGGTCCTTCGGGACAAGAAGAAAGATAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| 3UTR CAA 72 bp | TCTGGTTTGATGTGGAAGTCCTTGATCCACTTGGACTaGAGATTTGTACAGGGAGATAAGAATGGATCAATT | + |
|
Preference number: 4 (lower is better) Translates to: SGLMWKSLIHLD*RFVQGDKNGSI Trigger: AATTGATCCATTCTTATCTCCCTGTACAAATCTCAAGTCCAAGTGGATCAAGGACTTCCACATCAAACCAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
||
| CDS-3UTR TCA 90 bp | TTATATCTTTATCTTTCTTCTTGTCCCGAAGGACCTCAACTCGATTTAACTTTCCTTCTCCTGCATAGATaGTCAAATCTGGGTAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: LYLYLSSCPEGPQLDLTFLLLHR*SNLGKT Trigger: GGTCTTACCCAGATTTGATCATCTATGCAGGAGAAG...GAAAGTTAAATCGAGTTGAGGTCCTTCGGGACAAGAAGAAAGATAAAGATATAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR CCA 90 bp | TCTATTAGTTTCAGTGTGTCTGGTTTGATGTGGAAGTCCTTGATCCACTTGGACGACCACTTAAATTCATaGAGAATATTTAGGGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: SISFSVSGLMWKSLIHLDDHLNS*RIFRDS Trigger: AGAGTCCCTAAATATTCTCCATGAATTTAAGTGGTC...GTCCAAGTGGATCAAGGACTTCCACATCAAACCAGACACACTGAAACTAATAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
||
| CDS-3UTR TCA 90 bp | AACAAGGTTTTGTTATATCTTTATCTTTCTTCTTGTCCCGAAGGACCTCAACTCAGAATGGCTCTACTTTaGTCACACAGAGATAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: NKVLLYLYLSSCPEGPQLRMALL*SHRDNH Trigger: ATGGTTATCTCTGTGTGATCAAAGTAGAGCCATTCT...GAGTTGAGGTCCTTCGGGACAAGAAGAAAGATAAAGATATAACAAAACCTTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| 3UTR CAA 72 bp | GGATCAATTTGCATTCTTCTACATGTTCACTGCCAGTaGACCAGTACTGTTTGTTGGAAATTCTGTCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GSICILLHVHCQ*TSTVCWKFCLF Trigger: AAAAAGACAGAATTTCCAACAAACAGTACTGGTCAACTGGCAGTGAACATGTAGAAGAATGCAAATTGATCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
||
| CDS-3UTR TCA 90 bp | TTATATCTTTATCTTTCTTCTTGTCCCGAAGGACCTCAACTCGATTTAACTTTCTCAAACATGTTAGAATaGCAGACAGACTCGTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: LYLYLSSCPEGPQLDLTFSNMLE*QTDSSF Trigger: GAATGACGAGTCTGTCTGTCATTCTAACATGTTTGA...GAAAGTTAAATCGAGTTGAGGTCCTTCGGGACAAGAAGAAAGATAAAGATATAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR CAA 90 bp | GATTGGAGCGCTGTGGCACAAAATCAGCTCCAGGCGCAGACCCCAGTGCTACTTTCTCTAGATAGATCATaGGAAGCTGCCTCTGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: DWSAVAQNQLQAQTPVLLSLDRS*EAASGP Trigger: TGGCCCAGAGGCAGCTTCCAATGATCTATCTAGAGA...AAGTAGCACTGGGGTCTGCGCCTGGAGCTGATTTTGTGCCACAGCGCTCCAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR CAA 90 bp | GAAGTGGTGGACTTACCTGCGCTCACAGGCTTGTCCACACTTGTGGGAGGCCAGTGGAAAACTGGCAACTaGGATATTGCTTCATTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: EVVDLPALTGLSTLVGGQWKTGN*DIASFA Trigger: GGCAAATGAAGCAATATCCAAGTTGCCAGTTTTCCA...CTGGCCTCCCACAAGTGTGGACAAGCCTGTGAGCGCAGGTAAGTCCACCACTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR CAA 90 bp | TATTTAGGGATTGGAGCGCTGTGGCACAAAATCAGCTCCAGGCGCAGACCCCAGTGGAAAACTGGCAACTaGGATATTGCTTCATTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: YLGIGALWHKISSRRRPQWKTGN*DIASFA Trigger: GGCAAATGAAGCAATATCCAAGTTGCCAGTTTTCCA...CTGGGGTCTGCGCCTGGAGCTGATTTTGTGCCACAGCGCTCCAATCCCTAAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR CAA 90 bp | CTGATGATGCCAAGTGGCCTTGGTATCTGTTGCTTGTGTTCTTGCTGTTGCCTCTGCATTGCGTACCACTaGTGTGAGCTCTTCCTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LMMPSGLGICCLCSCCCLCIAYH*CELFLW Trigger: CCAAAGGAAGAGCTCACACAAGTGGTACGCAATGCA...GAGGCAACAGCAAGAACACAAGCAACAGATACCAAGGCCACTTGGCATCATCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR CAA 90 bp | AAGTGGTGGACTTACCTGCGCTCACAGGCTTGTCCACACTTGTGGGAGGCCAGTTTTCAAAAGCTGGATTaGATTCAAGGCTTTTCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: KWWTYLRSQACPHLWEASFQKLD*IQGFSD Trigger: GTCAGAAAAGCCTTGAATCAAATCCAGCTTTTGAAA...ACTGGCCTCCCACAAGTGTGGACAAGCCTGTGAGCGCAGGTAAGTCCACCACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR CAA 90 bp | ATGTCATGTGTACATTGCCTTGCCAGTCTTCTCTCCAGCTTTGTTTTCAGCCTCTCTCTAGATAGATCATaGGAAGCTGCCTCTGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: MSCVHCLASLLSSFVFSLSLDRS*EAASGP Trigger: TGGCCCAGAGGCAGCTTCCAATGATCTATCTAGAGA...GAGGCTGAAAACAAAGCTGGAGAGAAGACTGGCAAGGCAATGTACACATGACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS CCA 90 bp | CCTCAGGAGTTGAAAGATACAGAATATACAGATGTTTCATTGCTCTaGAAGCCAGGCAGAGCAATAGGTTGTGGGAAATGGGCTGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PQELKDTEYTDVSLL*KPGRAIGCGKWAAQ Trigger: CTGAGCAGCCCATTTCCCACAACCTATTGCTCTGCCTGGCTTCCAGAGCAATGAAACATCTGTATATTCTGTATCTTTCAACTCCTGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR CAA 90 bp | CCTCTCAGGAGACAGCCATATCAGGCTTCCATCAGTAAGCACTTTCTGGCATCCCTGGCAACTTGGATATaGCTTCATTTGCCACAATTT | + |
|
Preference number: 5 (lower is better) Translates to: PLRRQPYQASISKHFLASLATWI*LHLPQF Trigger: AAATTGTGGCAAATGAAGCAATATCCAAGTTGCCAG...GGATGCCAGAAAGTGCTTACTGATGGAAGCCTGATATGGCTGTCTCCTGAGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
||
| CDS-3UTR CAA 90 bp | AGCCTATGTCATGTGTACATTGCCTTGCCAGTCTTCTCTCCAGCTTTGTTTTCATGCATTGCGTACCACTaGTGTGAGCTCTTCCTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SLCHVYIALPVFSPALFSCIAYH*CELFLW Trigger: CCAAAGGAAGAGCTCACACAAGTGGTACGCAATGCA...TGAAAACAAAGCTGGAGAGAAGACTGGCAAGGCAATGTACACATGACATAGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR CAA 90 bp | ATGTCATGTGTACATTGCCTTGCCAGTCTTCTCTCCAGCTTTGTTTTCAGCCTCTATACAGATGTTTCATaGCTCTGGAAGCCAGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: MSCVHCLASLLSSFVFSLYTDVS*LWKPGR Trigger: TCTGCCTGGCTTCCAGAGCAATGAAACATCTGTATA...GAGGCTGAAAACAAAGCTGGAGAGAAGACTGGCAAGGCAATGTACACATGACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR CAA 90 bp | AGTTGTCTTCATCTCTGGTTTCAGTCCTTATGGTCTCAACGTTCCCATAGCCTATATACAGATGTTTCATaGCTCTGGAAGCCAGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SCLHLWFQSLWSQRSHSLYTDVS*LWKPGR Trigger: TCTGCCTGGCTTCCAGAGCAATGAAACATCTGTATA...TAGGCTATGGGAACGTTGAGACCATAAGGACTGAAACCAGAGATGAAGACAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS TCA 90 bp | CTCTCAGGAACATATGCTCATAGGCTTTCTTCTCCCTATCTGTGCTaGAAAGCACTGCAATATCTTGGGGAGAATAGCCTTTACTCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: LSGTYAHRLSSPYLC*KALQYLGENSLYSR Trigger: TCTTGAGTAAAGGCTATTCTCCCCAAGATATTGCAGTGCTTTTCAGCACAGATAGGGAGAAGAAAGCCTATGAGCATATGTTCCTGAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS TCA 90 bp | AGTTGCAATGGGATTGATACCAAACACAATGCTTCTTTCCAGTCCTaGGAATCGACGGATGCTGTCAAACATGTTAGAATGACAGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: SCNGIDTKHNASFQS*ESTDAVKHVRMTDR Trigger: TCTGTCTGTCATTCTAACATGTTTGACAGCATCCGTCGATTCTCAGGACTGGAAAGAAGCATTGTGTTTGGTATCAATCCCATTGCAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
||
| CDS-3UTR CAA 90 bp | TCTATTAGTTTCAGTGTGTCTGGTTTGATGTGGAAGTCCTTGATCCACTTGGACAAACTTATCCTCCTGTaGCTTGGTCTCAAAGAAAGC | + |
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Preference number: 5 (lower is better) Translates to: SISFSVSGLMWKSLIHLDKLILL*LGLKES Trigger: GCTTTCTTTGAGACCAAGCAACAGGAGGATAAGTTT...GTCCAAGTGGATCAAGGACTTCCACATCAAACCAGACACACTGAAACTAATAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
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| CDS-3UTR CAA 90 bp | AACAAGGTTTTGTTATATCTTTATCTTTCTTCTTGTCCCGAAGGACCTCAACTCAAACTTATCCTCCTGTaGCTTGGTCTCAAAGAAAGC | + |
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Preference number: 5 (lower is better) Translates to: NKVLLYLYLSSCPEGPQLKLILL*LGLKES Trigger: GCTTTCTTTGAGACCAAGCAACAGGAGGATAAGTTT...GAGTTGAGGTCCTTCGGGACAAGAAGAAAGATAAAGATATAACAAAACCTTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
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| CDS-3UTR CAA 90 bp | GTCTCTGTTCCCTACTTTGTCTTCATAGTTTCTCCTGTAAGTAATAGGTTCACCTTTCAAAAGCTGGATTaGATTCAAGGCTTTTCTGAC | + |
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Preference number: 5 (lower is better) Translates to: VSVPYFVFIVSPVSNRFTFQKLD*IQGFSD Trigger: GTCAGAAAAGCCTTGAATCAAATCCAGCTTTTGAAA...GGTGAACCTATTACTTACAGGAGAAACTATGAAGACAAAGTAGGGAACAGAGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038211.13 |
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| CDS TCA 90 bp | ATCTATGACTCTGGTCTCATAAGACACCTTGTTCTTGTCTTTAGATaGACAAAAATGGAAAACTGGCAACTTGGATATTGCTTCATTTGC | + |
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Preference number: 5 (lower is better) Translates to: IYDSGLIRHLVLVFR*TKMENWQLGYCFIC Trigger: GCAAATGAAGCAATATCCAAGTTGCCAGTTTTCCATTTTTGTTCATCTAAAGACAAGAACAAGGTGTCTTATGAGACCAGAGTCATAGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 ENSMUST00000138797.2 |
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| CDS GCA 72 bp | CATTGGAAGCTGCCTCTGGGCCAACATCCACCATCATaGGTACCCATTCCTCGGTGTTCAGTGTGTAGACAC | + |
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Preference number: 6 (lower is better) Translates to: HWKLPLGQHPPS*VPIPRCSVCRH Trigger: GTGTCTACACACTGAACACCGAGGAATGGGTACGCATGATGGTGGATGTTGGCCCAGAGGCAGCTTCCAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 ENSMUST00000138797.2 |
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| CDS TCA 72 bp | TACCACTTGTGTGAGCTCTTCCTTTGGATACTGGAGTaGGAAATCTGGGAGGCCACTCTCCTGCAAGTGACT | + |
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Preference number: 6 (lower is better) Translates to: YHLCELFLWILE*EIWEATLLQVT Trigger: AGTCACTTGCAGGAGAGTGGCCTCCCAGATTTCTCACTCCAGTATCCAAAGGAAGAGCTCACACAAGTGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
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| CDS TCA 72 bp | GGTCTGCAGTGTGGAGGGCTGTCGGATAGACTCAGCTaGCATTCAAAATCTCTAGATAGATCATTGGAAGCT | + |
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Preference number: 6 (lower is better) Translates to: GLQCGGLSDRLS*HSKSLDRSLEA Trigger: AGCTTCCAATGATCTATCTAGAGATTTTGAATGTCAGCTGAGTCTATCCGACAGCCCTCCACACTGCAGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 ENSMUST00000138797.2 |
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| CDS GCA 72 bp | CGTATTTGCTGCTTTACTAAATCCTCTAGTCTCTCATaGTGGGAACACAGCTCACTCCAGAGAGATTCAGGA | + |
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Preference number: 6 (lower is better) Translates to: RICCFTKSSSLS*WEHSSLQRDSG Trigger: TCCTGAATCTCTCTGGAGTGAGCTGTGTTCCCAGCATGAGAGACTAGAGGATTTAGTAAAGCAGCAAATACG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 ENSMUST00000138797.2 |
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| CDS CAA 72 bp | CAAAGATGTTTCCAAGTCCTGTCCCATCCTCTCAGGTaGCTCACTCTGGTTGGCCATTTGTATAACAATCAC | + |
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Preference number: 6 (lower is better) Translates to: QRCFQVLSHPLR*LTLVGHLYNNH Trigger: GTGATTGTTATACAAATGGCCAACCAGAGTGAGCAACCTGAGAGGATGGGACAGGACTTGGAAACATCTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 ENSMUST00000138797.2 |
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| CDS GCA 72 bp | GAGAGGATCAGCAAACCACAGGAGAAAGAACGTATTTaGTGCTTTACTAAATCCTCTAGTCTCTCATGCTGG | + |
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Preference number: 6 (lower is better) Translates to: ERISKPQEKERI*CFTKSSSLSCW Trigger: CCAGCATGAGAGACTAGAGGATTTAGTAAAGCAGCAAATACGTTCTTTCTCCTGTGGTTTGCTGATCCTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 ENSMUST00000138797.2 |
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| CDS CCA 72 bp | GCTTTTCTGACTCATGGTTCTGGGAATTTTAGCAGGTaGAGCTCTGTCATCAGTCGGACTGCATTTGATATA | + |
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Preference number: 6 (lower is better) Translates to: AFLTHGSGNFSR*SSVISRTAFDI Trigger: TATATCAAATGCAGTCCGACTGATGACAGAGCTCCACCTGCTAAAATTCCCAGAACCATGAGTCAGAAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 ENSMUST00000138797.2 |
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| CDS GCA 72 bp | AGGATCAGCAAACCACAGGAGAAAGAACGTATTTGCTaGTTTACTAAATCCTCTAGTCTCTCATGCTGGGAA | + |
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Preference number: 6 (lower is better) Translates to: RISKPQEKERIC*FTKSSSLSCWE Trigger: TTCCCAGCATGAGAGACTAGAGGATTTAGTAAAGCAGCAAATACGTTCTTTCTCCTGTGGTTTGCTGATCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 ENSMUST00000138797.2 |
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| CDS TCA 72 bp | GATTCAGGAGTATACTTTAAACAGTCTGGTGACACTTaGAATAAACGCTGCTGCAGGTCGACTTTATGTTCC | + |
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Preference number: 6 (lower is better) Translates to: DSGVYFKQSGDT*NKRCCRSTLCS Trigger: GGAACATAAAGTCGACCTGCAGCAGCGTTTATTTCAAGTGTCACCAGACTGTTTAAAGTATACTCCTGAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 ENSMUST00000138797.2 |
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| CDS GCA 72 bp | ATAGGCTTTCTTCTCCCTATCTGTGCTGAAAAGCACTaGAATATCTTGGGGAGAATAGCCTTTACTCAAGAA | + |
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Preference number: 6 (lower is better) Translates to: IGFLLPICAEKH*NILGRIAFTQE Trigger: TTCTTGAGTAAAGGCTATTCTCCCCAAGATATTGCAGTGCTTTTCAGCACAGATAGGGAGAAGAAAGCCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
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| CDS TCA 72 bp | GACCACTTAAATTCATGGAGAATATTTAGGGACTCTTaGGGAATGCTGCATGGAGGGTTATCTCTGATTTTT | + |
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Preference number: 6 (lower is better) Translates to: DHLNSWRIFRDS*GMLHGGLSLIF Trigger: AAAAATCAGAGATAACCCTCCATGCAGCATTCCTCAAGAGTCCCTAAATATTCTCCATGAATTTAAGTGGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
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| CDS TCA 72 bp | CTTTTCCAAAGTCAAGTATGTAATCTCATAGGTGCCTaGTACACCTTGGGACCACTTAAATTCATGGAGAAT | + |
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Preference number: 6 (lower is better) Translates to: LFQSQVCNLIGA*YTLGPLKFMEN Trigger: ATTCTCCATGAATTTAAGTGGTCCCAAGGTGTATCAGGCACCTATGAGATTACATACTTGACTTTGGAAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 |
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| CDS TCA 72 bp | GATAACCATACAAATTTCCCTCTTGAAACACATCTATaGCTCTGGTCTCATAAGACACCTTGTTCTTGTCTT | + |
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Preference number: 6 (lower is better) Translates to: DNHTNFPLETHL*LWSHKTPCSCL Trigger: AAGACAAGAACAAGGTGTCTTATGAGACCAGAGTCATAGATGTGTTTCAAGAGGGAAATTTGTATGGTTATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038211.13 ENSMUST00000092840.11 ENSMUST00000138797.2 |
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