Pregenerated sensors for SLFN4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000204Ensembl transcript IDs: ENSMUST00000000208.13, ENSMUST00000167596.2, ENSMUST00000215472.2
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTAAAGATGAATTGTATTGATAAAGAAATAGATCAGAGCAGAACATaGCTAAGGATAATGGGGCCTGTGAACACCCAACTCATAGCCCCC | + |
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Preference number: 1 (lower is better) Translates to: LKMNCIDKEIDQSRT*LRIMGPVNTQLIAP Trigger: GGGGGCTATGAGTTGGGTGTTCACAGGCCCCATTATCCTTAGCCATGTTCTGCTCTGATCTATTTCTTTATCAATACAATTCATCTTTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 ENSMUST00000215472.2 |
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| 3UTR-3UTR CCA 90 bp | CATGGCCTAAGACCAGCCTGTAGACTGTCTTACATACAAGAGATACAATGTTTTCACTACAGTTTTACCTaGGTAAACTGTAGAAAGACT | + |
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Preference number: 2 (lower is better) Translates to: HGLRPACRLSYIQEIQCFHYSFT*VNCRKT Trigger: AGTCTTTCTACAGTTTACCCAGGTAAAACTGTAGTG...AAAACATTGTATCTCTTGTATGTAAGACAGTCTACAGGCTGGTCTTAGGCCATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 ENSMUST00000215472.2 |
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| 3UTR-3UTR CCA 90 bp | ACAAGAGATACAATGTTTTCCTTTAAGACAGAATGTGTCAAGACAGACTGGAATCACTACAGTTTTACCTaGGTAAACTGTAGAAAGACT | + |
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Preference number: 2 (lower is better) Translates to: TRDTMFSFKTECVKTDWNHYSFT*VNCRKT Trigger: AGTCTTTCTACAGTTTACCCAGGTAAAACTGTAGTG...ATTCCAGTCTGTCTTGACACATTCTGTCTTAAAGGAAAACATTGTATCTCTTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 ENSMUST00000215472.2 |
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| 3UTR CCA 72 bp | AATTGTATTGATAAAGAAATAGATCAGAGCAGAACATaGCTAAGGATAATGGGGCCTGTGAACACCCAACTC | + |
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Preference number: 3 (lower is better) Translates to: NCIDKEIDQSRT*LRIMGPVNTQL Trigger: GAGTTGGGTGTTCACAGGCCCCATTATCCTTAGCCATGTTCTGCTCTGATCTATTTCTTTATCAATACAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 ENSMUST00000215472.2 |
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| CDS-3UTR TCA 90 bp | CATGGCCTAAGACCAGCCTGTAGACTGTCTTACATACAAGAGATACAATGTTTTTCTCTCCTTCCCAGATaGAATCCTTTCCACGACGCC | + |
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Preference number: 4 (lower is better) Translates to: HGLRPACRLSYIQEIQCFSLLPR*NPFHDA Trigger: GGCGTCGTGGAAAGGATTTCATCTGGGAAGGAGAGA...AAAACATTGTATCTCTTGTATGTAAGACAGTCTACAGGCTGGTCTTAGGCCATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS-3UTR GCA 90 bp | CATGGCCTAAGACCAGCCTGTAGACTGTCTTACATACAAGAGATACAATGTTTTCTCTGCAGCGAACACTaGACAGCAGAACTTCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: HGLRPACRLSYIQEIQCFLCSEH*TAELLH Trigger: GTGGAGAAGTTCTGCTGTGCAGTGTTCGCTGCAGAG...AAAACATTGTATCTCTTGTATGTAAGACAGTCTACAGGCTGGTCTTAGGCCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS-3UTR GCA 90 bp | CATGGCCTAAGACCAGCCTGTAGACTGTCTTACATACAAGAGATACAATGTTTTGATCGCGCACACATATaGACACACAGCTCCGGATTT | + |
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Preference number: 4 (lower is better) Translates to: HGLRPACRLSYIQEIQCFDRAHI*THSSGF Trigger: AAATCCGGAGCTGTGTGTGCATATGTGTGCGCGATC...AAAACATTGTATCTCTTGTATGTAAGACAGTCTACAGGCTGGTCTTAGGCCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS-3UTR GCA 90 bp | CATGGCCTAAGACCAGCCTGTAGACTGTCTTACATACAAGAGATACAATGTTTTGTGAGAATGGTTTCATaGAGAGGGCTTCTGGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: HGLRPACRLSYIQEIQCFVRMVS*RGLLES Trigger: GCTCTCCAGAAGCCCTCTGCATGAAACCATTCTCAC...AAAACATTGTATCTCTTGTATGTAAGACAGTCTACAGGCTGGTCTTAGGCCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 ENSMUST00000215472.2 |
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| CDS-3UTR CCA 90 bp | CATGGCCTAAGACCAGCCTGTAGACTGTCTTACATACAAGAGATACAATGTTTTCATGCAGAGGGCTTCTaGAGAGCATATCACCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: HGLRPACRLSYIQEIQCFHAEGF*RAYHLS Trigger: GGAAAGGTGATATGCTCTCCAGAAGCCCTCTGCATG...AAAACATTGTATCTCTTGTATGTAAGACAGTCTACAGGCTGGTCTTAGGCCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 ENSMUST00000215472.2 |
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| CDS-3UTR CCA 90 bp | CATGGCCTAAGACCAGCCTGTAGACTGTCTTACATACAAGAGATACAATGTTTTCCAAAGCCCAGCTCTTaGAGACAACCAGTGTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: HGLRPACRLSYIQEIQCFPKPSS*RQPVFL Trigger: AAGGAACACTGGTTGTCTCCAAGAGCTGGGCTTTGG...AAAACATTGTATCTCTTGTATGTAAGACAGTCTACAGGCTGGTCTTAGGCCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 ENSMUST00000215472.2 |
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| CDS-3UTR CCA 90 bp | CATGGCCTAAGACCAGCCTGTAGACTGTCTTACATACAAGAGATACAATGTTTTAGGTTCTCATCTCCCTaGACAAAGACATGCAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: HGLRPACRLSYIQEIQCFRFSSP*TKTCRV Trigger: GACCCTGCATGTCTTTGTCCAGGGAGATGAGAACCT...AAAACATTGTATCTCTTGTATGTAAGACAGTCTACAGGCTGGTCTTAGGCCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 ENSMUST00000215472.2 |
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| CDS-3UTR TCA 90 bp | CATGGCCTAAGACCAGCCTGTAGACTGTCTTACATACAAGAGATACAATGTTTTTGCCATCCAAGCCAATaGACAAATATCCCCCATCAG | + |
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Preference number: 4 (lower is better) Translates to: HGLRPACRLSYIQEIQCFCHPSQ*TNIPHQ Trigger: CTGATGGGGGATATTTGTTCATTGGCTTGGATGGCA...AAAACATTGTATCTCTTGTATGTAAGACAGTCTACAGGCTGGTCTTAGGCCATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS-3UTR TCA 90 bp | CATGGCCTAAGACCAGCCTGTAGACTGTCTTACATACAAGAGATACAATGTTTTTCTTCTCTCCGAGTGTaGTTTCTCCTACAGACAGAA | + |
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Preference number: 4 (lower is better) Translates to: HGLRPACRLSYIQEIQCFSSLRV*FLLQTE Trigger: TTCTGTCTGTAGGAGAAATCACACTCGGAGAGAAGA...AAAACATTGTATCTCTTGTATGTAAGACAGTCTACAGGCTGGTCTTAGGCCATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS-3UTR TCA 90 bp | GATCACTACAGTTTTACCTGGGTAAACTGTAGAAAGACTCATTACTTCCAAATATTCTCCTCACAGAAGTaGGTGACAGGCAGCTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: DHYSFTWVNCRKTHYFQIFSSQK*VTGSCW Trigger: CCAACAGCTGCCTGTCACTCACTTCTGTGAGGAGAA...TATTTGGAAGTAATGAGTCTTTCTACAGTTTACCCAGGTAAAACTGTAGTGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS-3UTR GCA 90 bp | GATCACTACAGTTTTACCTGGGTAAACTGTAGAAAGACTCATTACTTCCAAATACTCTGCAGCGAACACTaGACAGCAGAACTTCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: DHYSFTWVNCRKTHYFQILCSEH*TAELLH Trigger: GTGGAGAAGTTCTGCTGTGCAGTGTTCGCTGCAGAG...TATTTGGAAGTAATGAGTCTTTCTACAGTTTACCCAGGTAAAACTGTAGTGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS-3UTR GCA 90 bp | GATCACTACAGTTTTACCTGGGTAAACTGTAGAAAGACTCATTACTTCCAAATAGCAGGGTCAGGAGACTaGCCTGGGAAATATGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: DHYSFTWVNCRKTHYFQIAGSGD*PGKYEA Trigger: TGCTTCATATTTCCCAGGGCAGTCTCCTGACCCTGC...TATTTGGAAGTAATGAGTCTTTCTACAGTTTACCCAGGTAAAACTGTAGTGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 ENSMUST00000215472.2 |
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| CDS-3UTR GCA 90 bp | ACAAGAGATACAATGTTTTCCTTTAAGACAGAATGTGTCAAGACAGACTGGAATGCAGGGTCAGGAGACTaGCCTGGGAAATATGAAGCA | + |
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Preference number: 4 (lower is better) Translates to: TRDTMFSFKTECVKTDWNAGSGD*PGKYEA Trigger: TGCTTCATATTTCCCAGGGCAGTCTCCTGACCCTGC...ATTCCAGTCTGTCTTGACACATTCTGTCTTAAAGGAAAACATTGTATCTCTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 ENSMUST00000215472.2 |
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| CDS-3UTR TCA 90 bp | GATCACTACAGTTTTACCTGGGTAAACTGTAGAAAGACTCATTACTTCCAAATACCTGGACACTTGACTTaGACAGAGGGCTCTATGGAT | + |
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Preference number: 4 (lower is better) Translates to: DHYSFTWVNCRKTHYFQIPGHLT*TEGSMD Trigger: ATCCATAGAGCCCTCTGTTCAAGTCAAGTGTCCAGG...TATTTGGAAGTAATGAGTCTTTCTACAGTTTACCCAGGTAAAACTGTAGTGATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS-3UTR TCA 90 bp | ACAAGAGATACAATGTTTTCCTTTAAGACAGAATGTGTCAAGACAGACTGGAATCCTGGACACTTGACTTaGACAGAGGGCTCTATGGAT | + |
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Preference number: 4 (lower is better) Translates to: TRDTMFSFKTECVKTDWNPGHLT*TEGSMD Trigger: ATCCATAGAGCCCTCTGTTCAAGTCAAGTGTCCAGG...ATTCCAGTCTGTCTTGACACATTCTGTCTTAAAGGAAAACATTGTATCTCTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS-3UTR TCA 90 bp | ACAAGAGATACAATGTTTTCCTTTAAGACAGAATGTGTCAAGACAGACTGGAATTATCCCCTGGACACTTaGCTTGAACAGAGGGCTCTA | + |
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Preference number: 4 (lower is better) Translates to: TRDTMFSFKTECVKTDWNYPLDT*LEQRAL Trigger: TAGAGCCCTCTGTTCAAGTCAAGTGTCCAGGGGATA...ATTCCAGTCTGTCTTGACACATTCTGTCTTAAAGGAAAACATTGTATCTCTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS-3UTR TCA 90 bp | GATCACTACAGTTTTACCTGGGTAAACTGTAGAAAGACTCATTACTTCCAAATATATCCCCTGGACACTTaGCTTGAACAGAGGGCTCTA | + |
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Preference number: 4 (lower is better) Translates to: DHYSFTWVNCRKTHYFQIYPLDT*LEQRAL Trigger: TAGAGCCCTCTGTTCAAGTCAAGTGTCCAGGGGATA...TATTTGGAAGTAATGAGTCTTTCTACAGTTTACCCAGGTAAAACTGTAGTGATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS-3UTR TCA 90 bp | GATCACTACAGTTTTACCTGGGTAAACTGTAGAAAGACTCATTACTTCCAAATAAACTTGGTCTGGATTTaGGGAACTGCACTGCATCCG | + |
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Preference number: 4 (lower is better) Translates to: DHYSFTWVNCRKTHYFQINLVWI*GTALHP Trigger: CGGATGCAGTGCAGTTCCTCAAATCCAGACCAAGTT...TATTTGGAAGTAATGAGTCTTTCTACAGTTTACCCAGGTAAAACTGTAGTGATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS-3UTR GCA 90 bp | GATCACTACAGTTTTACCTGGGTAAACTGTAGAAAGACTCATTACTTCCAAATAGATCGCGCACACATATaGACACACAGCTCCGGATTT | + |
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Preference number: 4 (lower is better) Translates to: DHYSFTWVNCRKTHYFQIDRAHI*THSSGF Trigger: AAATCCGGAGCTGTGTGTGCATATGTGTGCGCGATC...TATTTGGAAGTAATGAGTCTTTCTACAGTTTACCCAGGTAAAACTGTAGTGATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS-3UTR CCA 90 bp | GATCACTACAGTTTTACCTGGGTAAACTGTAGAAAGACTCATTACTTCCAAATACATGCAGAGGGCTTCTaGAGAGCATATCACCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: DHYSFTWVNCRKTHYFQIHAEGF*RAYHLS Trigger: GGAAAGGTGATATGCTCTCCAGAAGCCCTCTGCATG...TATTTGGAAGTAATGAGTCTTTCTACAGTTTACCCAGGTAAAACTGTAGTGATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 ENSMUST00000215472.2 |
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| CDS-3UTR CCA 90 bp | GATCACTACAGTTTTACCTGGGTAAACTGTAGAAAGACTCATTACTTCCAAATACCAAAGCCCAGCTCTTaGAGACAACCAGTGTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: DHYSFTWVNCRKTHYFQIPKPSS*RQPVFL Trigger: AAGGAACACTGGTTGTCTCCAAGAGCTGGGCTTTGG...TATTTGGAAGTAATGAGTCTTTCTACAGTTTACCCAGGTAAAACTGTAGTGATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 ENSMUST00000215472.2 |
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| CDS-3UTR CCA 90 bp | ACAAGAGATACAATGTTTTCCTTTAAGACAGAATGTGTCAAGACAGACTGGAATAGGTTCTCATCTCCCTaGACAAAGACATGCAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: TRDTMFSFKTECVKTDWNRFSSP*TKTCRV Trigger: GACCCTGCATGTCTTTGTCCAGGGAGATGAGAACCT...ATTCCAGTCTGTCTTGACACATTCTGTCTTAAAGGAAAACATTGTATCTCTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 ENSMUST00000215472.2 |
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| CDS-3UTR CCA 90 bp | GATCACTACAGTTTTACCTGGGTAAACTGTAGAAAGACTCATTACTTCCAAATAAGGTTCTCATCTCCCTaGACAAAGACATGCAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: DHYSFTWVNCRKTHYFQIRFSSP*TKTCRV Trigger: GACCCTGCATGTCTTTGTCCAGGGAGATGAGAACCT...TATTTGGAAGTAATGAGTCTTTCTACAGTTTACCCAGGTAAAACTGTAGTGATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 ENSMUST00000215472.2 |
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| CDS-3UTR TCA 90 bp | ACAAGAGATACAATGTTTTCCTTTAAGACAGAATGTGTCAAGACAGACTGGAATTGCCATCCAAGCCAATaGACAAATATCCCCCATCAG | + |
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Preference number: 4 (lower is better) Translates to: TRDTMFSFKTECVKTDWNCHPSQ*TNIPHQ Trigger: CTGATGGGGGATATTTGTTCATTGGCTTGGATGGCA...ATTCCAGTCTGTCTTGACACATTCTGTCTTAAAGGAAAACATTGTATCTCTTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS-3UTR TCA 90 bp | ACAAGAGATACAATGTTTTCCTTTAAGACAGAATGTGTCAAGACAGACTGGAATTCTTCTCTCCGAGTGTaGTTTCTCCTACAGACAGAA | + |
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Preference number: 4 (lower is better) Translates to: TRDTMFSFKTECVKTDWNSSLRV*FLLQTE Trigger: TTCTGTCTGTAGGAGAAATCACACTCGGAGAGAAGA...ATTCCAGTCTGTCTTGACACATTCTGTCTTAAAGGAAAACATTGTATCTCTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS-3UTR CCA 90 bp | CATGGCCTAAGACCAGCCTGTAGACTGTCTTACATACAAGAGATACAATGTTTTCTGATTCGGCTTCCATaGTTTCACAAAAACGAAAAA | + |
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Preference number: 4 (lower is better) Translates to: HGLRPACRLSYIQEIQCFLIRLP*FHKNEK Trigger: TTTTTCGTTTTTGTGAAACCATGGAAGCCGAATCAG...AAAACATTGTATCTCTTGTATGTAAGACAGTCTACAGGCTGGTCTTAGGCCATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS-3UTR TCA 90 bp | ACAAGAGATACAATGTTTTCCTTTAAGACAGAATGTGTCAAGACAGACTGGAATTTGGCTATCTTTCATTaGATCCCTAGTCTTCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: TRDTMFSFKTECVKTDWNLAIFH*IPSLLS Trigger: GGAGAGAAGACTAGGGATTCAATGAAAGATAGCCAA...ATTCCAGTCTGTCTTGACACATTCTGTCTTAAAGGAAAACATTGTATCTCTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS-3UTR TCA 90 bp | GATCACTACAGTTTTACCTGGGTAAACTGTAGAAAGACTCATTACTTCCAAATATTGGCTATCTTTCATTaGATCCCTAGTCTTCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: DHYSFTWVNCRKTHYFQILAIFH*IPSLLS Trigger: GGAGAGAAGACTAGGGATTCAATGAAAGATAGCCAA...TATTTGGAAGTAATGAGTCTTTCTACAGTTTACCCAGGTAAAACTGTAGTGATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS-3UTR CCA 90 bp | GATCACTACAGTTTTACCTGGGTAAACTGTAGAAAGACTCATTACTTCCAAATACTCTATGGATGTCTGTaGATTCACATCTTTCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: DHYSFTWVNCRKTHYFQILYGCL*IHIFLQ Trigger: CTGGAGAAAGATGTGAATCCACAGACATCCATAGAG...TATTTGGAAGTAATGAGTCTTTCTACAGTTTACCCAGGTAAAACTGTAGTGATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS-3UTR CCA 90 bp | ACAAGAGATACAATGTTTTCCTTTAAGACAGAATGTGTCAAGACAGACTGGAATCTGAAGAATATCCCCTaGACACTTGACTTGAACAGA | + |
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Preference number: 4 (lower is better) Translates to: TRDTMFSFKTECVKTDWNLKNIP*TLDLNR Trigger: TCTGTTCAAGTCAAGTGTCCAGGGGATATTCTTCAG...ATTCCAGTCTGTCTTGACACATTCTGTCTTAAAGGAAAACATTGTATCTCTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS-3UTR CCA 90 bp | GATCACTACAGTTTTACCTGGGTAAACTGTAGAAAGACTCATTACTTCCAAATACTGAAGAATATCCCCTaGACACTTGACTTGAACAGA | + |
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Preference number: 4 (lower is better) Translates to: DHYSFTWVNCRKTHYFQILKNIP*TLDLNR Trigger: TCTGTTCAAGTCAAGTGTCCAGGGGATATTCTTCAG...TATTTGGAAGTAATGAGTCTTTCTACAGTTTACCCAGGTAAAACTGTAGTGATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS-3UTR CCA 90 bp | ACAAGAGATACAATGTTTTCCTTTAAGACAGAATGTGTCAAGACAGACTGGAATCAGACTGTTTTTCCATaGGAACTTGGTCTGGATTTG | + |
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Preference number: 4 (lower is better) Translates to: TRDTMFSFKTECVKTDWNQTVFP*ELGLDL Trigger: CAAATCCAGACCAAGTTCCCATGGAAAAACAGTCTG...ATTCCAGTCTGTCTTGACACATTCTGTCTTAAAGGAAAACATTGTATCTCTTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS-3UTR CCA 90 bp | GATCACTACAGTTTTACCTGGGTAAACTGTAGAAAGACTCATTACTTCCAAATATCTTTTCTTCTCAGTTaGCTATCTTTCATTGAATCC | + |
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Preference number: 4 (lower is better) Translates to: DHYSFTWVNCRKTHYFQISFLLS*LSFIES Trigger: GGATTCAATGAAAGATAGCCAACTGAGAAGAAAAGA...TATTTGGAAGTAATGAGTCTTTCTACAGTTTACCCAGGTAAAACTGTAGTGATC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS-3UTR CCA 90 bp | ACAAGAGATACAATGTTTTCCTTTAAGACAGAATGTGTCAAGACAGACTGGAATTCTTTTCTTCTCAGTTaGCTATCTTTCATTGAATCC | + |
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Preference number: 4 (lower is better) Translates to: TRDTMFSFKTECVKTDWNSFLLS*LSFIES Trigger: GGATTCAATGAAAGATAGCCAACTGAGAAGAAAAGA...ATTCCAGTCTGTCTTGACACATTCTGTCTTAAAGGAAAACATTGTATCTCTTGT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS GCA 90 bp | AATAGCCCTTTAACTCGGCGCCTAGTTTCCCAAGAAGACTGCTGTTaGCTTCCAGGTTCTCATCTCCCTGGACAAAGACATGCAGGGTCA | + |
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Preference number: 5 (lower is better) Translates to: NSPLTRRLVSQEDCC*LPGSHLPGQRHAGS Trigger: TGACCCTGCATGTCTTTGTCCAGGGAGATGAGAACCTGGAAGGCAACAGCAGTCTTCTTGGGAAACTAGGCGCCGAGTTAAAGGGCTATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 ENSMUST00000215472.2 |
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| CDS TCA 90 bp | TCGACAGTGATGTTCATTTTGCAGTCACTGTCTCTCCTTCCCAGATaGAATCCTTTCCACGACGCCATCCATCTTCCTCGCTTGGCATGC | + |
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Preference number: 5 (lower is better) Translates to: STVMFILQSLSLLPR*NPFHDAIHLPRLAC Trigger: GCATGCCAAGCGAGGAAGATGGATGGCGTCGTGGAAAGGATTTCATCTGGGAAGGAGAGACAGTGACTGCAAAATGAACATCACTGTCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS GCA 90 bp | TCCACTCTGATCGCGCACACATATGCACACACAGCTCCGGATTTGTaGACTTCGATGAATTTGCACGTGTACTTGATCTTCTCCTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: STLIAHTYAHTAPDL*TSMNLHVYLIFSFS Trigger: GGAGAAGGAGAAGATCAAGTACACGTGCAAATTCATCGAAGTGCACAAATCCGGAGCTGTGTGTGCATATGTGTGCGCGATCAGAGTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS TCA 90 bp | CTACAGACAGAACCAGTTCAGCGTAGTCCGTGTCCTGATCGACAGTaGTGTTCATTTTGCAGTCACTGTCTCTCCTTCCCAGATGAAATC | + |
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Preference number: 5 (lower is better) Translates to: LQTEPVQRSPCPDRQ*CSFCSHCLSFPDEI Trigger: GATTTCATCTGGGAAGGAGAGACAGTGACTGCAAAATGAACATCACTGTCGATCAGGACACGGACTACGCTGAACTGGTTCTGTCTGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS GCA 90 bp | GTTTATAATAGCCCTTTAACTCGGCGCCTAGTTTCCCAAGAAGACTaGTGTTGCCTTCCAGGTTCTCATCTCCCTGGACAAAGACATGCA | + |
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Preference number: 5 (lower is better) Translates to: VYNSPLTRRLVSQED*CCLPGSHLPGQRHA Trigger: TGCATGTCTTTGTCCAGGGAGATGAGAACCTGGAAGGCAACAGCAGTCTTCTTGGGAAACTAGGCGCCGAGTTAAAGGGCTATTATAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 ENSMUST00000215472.2 |
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| CDS CCA 90 bp | CAACTGAGAATGAGAAGATTCTCTTGTACAAGTTGGTTTTCCAGGTaGCGATCCCCGGACCTCTCTGATTCGGCTTCCATGGTTTCACAA | + |
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Preference number: 5 (lower is better) Translates to: QLRMRRFSCTSWFSR*RSPDLSDSASMVSQ Trigger: TTGTGAAACCATGGAAGCCGAATCAGAGAGGTCCGGGGATCGCCACCTGGAAAACCAACTTGTACAAGAGAATCTTCTCATTCTCAGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS-3UTR CAA 90 bp | CATGGCCTAAGACCAGCCTGTAGACTGTCTTACATACAAGAGATACAATGTTTTTCCAAAGCCCAGCTCTaGGAGACAACCAGTGTTCCT | + |
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Preference number: 5 (lower is better) Translates to: HGLRPACRLSYIQEIQCFSKAQL*ETTSVP Trigger: AGGAACACTGGTTGTCTCCAAGAGCTGGGCTTTGGA...AAAACATTGTATCTCTTGTATGTAAGACAGTCTACAGGCTGGTCTTAGGCCATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 ENSMUST00000215472.2 |
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| CDS TCA 90 bp | GCTTCCATGGTTTCACAAAAACGAAAAAGTAGTCGTTGTACTGCATaGAGTCTAGATAGTCATGAGGAAGGTGCAGGATACCAGGCAAGG | + |
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Preference number: 5 (lower is better) Translates to: ASMVSQKRKSSRCTA*SLDSHEEGAGYQAR Trigger: CCTTGCCTGGTATCCTGCACCTTCCTCATGACTATCTAGACTTCATGCAGTACAACGACTACTTTTTCGTTTTTGTGAAACCATGGAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS-3UTR CAA 90 bp | CATGGCCTAAGACCAGCCTGTAGACTGTCTTACATACAAGAGATACAATGTTTTGAACTTGGTCTGGATTaGAGGAACTGCACTGCATCC | + |
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Preference number: 5 (lower is better) Translates to: HGLRPACRLSYIQEIQCFELGLD*RNCTAS Trigger: GGATGCAGTGCAGTTCCTCAAATCCAGACCAAGTTC...AAAACATTGTATCTCTTGTATGTAAGACAGTCTACAGGCTGGTCTTAGGCCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS-3UTR CAA 90 bp | CATGGCCTAAGACCAGCCTGTAGACTGTCTTACATACAAGAGATACAATGTTTTCCAAGAAGACTGCTGTaGCCTTCCAGGTTCTCATCT | + |
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Preference number: 5 (lower is better) Translates to: HGLRPACRLSYIQEIQCFPRRLL*PSRFSS Trigger: AGATGAGAACCTGGAAGGCAACAGCAGTCTTCTTGG...AAAACATTGTATCTCTTGTATGTAAGACAGTCTACAGGCTGGTCTTAGGCCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 ENSMUST00000215472.2 |
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| CDS TCA 90 bp | ATGAATTTGCACGTGTACTTGATCTTCTCCTTCTCCTCACAGAAGTaGGTGACAGGCAGCTGTTGGATGCACTTTTCTATTTCACTCTCT | + |
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Preference number: 5 (lower is better) Translates to: MNLHVYLIFSFSSQK*VTGSCWMHFSISLS Trigger: AGAGAGTGAAATAGAAAAGTGCATCCAACAGCTGCCTGTCACTCACTTCTGTGAGGAGAAGGAGAAGATCAAGTACACGTGCAAATTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS CCA 90 bp | AAGGAAAGACATTCATTTAGTGTTTCATTACAGACTGTTTTTCCATaGGAACTTGGTCTGGATTTGAGGAACTGCACTGCATCCGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: KERHSFSVSLQTVFP*ELGLDLRNCTASAA Trigger: AGCAGCGGATGCAGTGCAGTTCCTCAAATCCAGACCAAGTTCCCATGGAAAAACAGTCTGTAATGAAACACTAAATGAATGTCTTTCCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS-3UTR CAA 90 bp | GATCACTACAGTTTTACCTGGGTAAACTGTAGAAAGACTCATTACTTCCAAATACCCTGGACACTTGACTaGAACAGAGGGCTCTATGGA | + |
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Preference number: 5 (lower is better) Translates to: DHYSFTWVNCRKTHYFQIPWTLD*NRGLYG Trigger: TCCATAGAGCCCTCTGTTCAAGTCAAGTGTCCAGGG...TATTTGGAAGTAATGAGTCTTTCTACAGTTTACCCAGGTAAAACTGTAGTGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS-3UTR CAA 90 bp | ACAAGAGATACAATGTTTTCCTTTAAGACAGAATGTGTCAAGACAGACTGGAATCCCTGGACACTTGACTaGAACAGAGGGCTCTATGGA | + |
|
Preference number: 5 (lower is better) Translates to: TRDTMFSFKTECVKTDWNPWTLD*NRGLYG Trigger: TCCATAGAGCCCTCTGTTCAAGTCAAGTGTCCAGGG...ATTCCAGTCTGTCTTGACACATTCTGTCTTAAAGGAAAACATTGTATCTCTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS-3UTR CAA 90 bp | CATGGCCTAAGACCAGCCTGTAGACTGTCTTACATACAAGAGATACAATGTTTTATTCTCTTGTACAAGTaGGTTTTCCAGGTGGCGATC | + |
|
Preference number: 5 (lower is better) Translates to: HGLRPACRLSYIQEIQCFILLYK*VFQVAI Trigger: GATCGCCACCTGGAAAACCAACTTGTACAAGAGAAT...AAAACATTGTATCTCTTGTATGTAAGACAGTCTACAGGCTGGTCTTAGGCCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS-3UTR CAA 90 bp | GATCACTACAGTTTTACCTGGGTAAACTGTAGAAAGACTCATTACTTCCAAATATCCAAAGCCCAGCTCTaGGAGACAACCAGTGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: DHYSFTWVNCRKTHYFQISKAQL*ETTSVP Trigger: AGGAACACTGGTTGTCTCCAAGAGCTGGGCTTTGGA...TATTTGGAAGTAATGAGTCTTTCTACAGTTTACCCAGGTAAAACTGTAGTGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 ENSMUST00000215472.2 |
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| CDS CCA 90 bp | GTGCACACAGCCTGTAATATACTTTTGGCTTCTTTTCTTCTCAGTTaGCTATCTTTCATTGAATCCCTAGTCTTCTCTCCGAGTGTGATT | + |
|
Preference number: 5 (lower is better) Translates to: VHTACNILLASFLLS*LSFIESLVFSPSVI Trigger: AATCACACTCGGAGAGAAGACTAGGGATTCAATGAAAGATAGCCAACTGAGAAGAAAAGAAGCCAAAAGTATATTACAGGCTGTGTGCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS-3UTR CAA 90 bp | CATGGCCTAAGACCAGCCTGTAGACTGTCTTACATACAAGAGATACAATGTTTTACAGTGATGTTCATTTaGCAGTCACTGTCTCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: HGLRPACRLSYIQEIQCFTVMFI*QSLSLL Trigger: AAGGAGAGACAGTGACTGCAAAATGAACATCACTGT...AAAACATTGTATCTCTTGTATGTAAGACAGTCTACAGGCTGGTCTTAGGCCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS-3UTR CAA 90 bp | ACAAGAGATACAATGTTTTCCTTTAAGACAGAATGTGTCAAGACAGACTGGAATCCAAGAAGACTGCTGTaGCCTTCCAGGTTCTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: TRDTMFSFKTECVKTDWNPRRLL*PSRFSS Trigger: AGATGAGAACCTGGAAGGCAACAGCAGTCTTCTTGG...ATTCCAGTCTGTCTTGACACATTCTGTCTTAAAGGAAAACATTGTATCTCTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 ENSMUST00000215472.2 |
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| CDS-3UTR CAA 90 bp | GATCACTACAGTTTTACCTGGGTAAACTGTAGAAAGACTCATTACTTCCAAATAATTCTCTTGTACAAGTaGGTTTTCCAGGTGGCGATC | + |
|
Preference number: 5 (lower is better) Translates to: DHYSFTWVNCRKTHYFQIILLYK*VFQVAI Trigger: GATCGCCACCTGGAAAACCAACTTGTACAAGAGAAT...TATTTGGAAGTAATGAGTCTTTCTACAGTTTACCCAGGTAAAACTGTAGTGATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS-3UTR CAA 90 bp | CATGGCCTAAGACCAGCCTGTAGACTGTCTTACATACAAGAGATACAATGTTTTTTCAAAACCAATAATTaGCTGCGTTTTGCCATCCAA | + |
|
Preference number: 5 (lower is better) Translates to: HGLRPACRLSYIQEIQCFFKTNN*LRFAIQ Trigger: TTGGATGGCAAAACGCAGCAAATTATTGGTTTTGAA...AAAACATTGTATCTCTTGTATGTAAGACAGTCTACAGGCTGGTCTTAGGCCATG 39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS-3UTR CAA 90 bp | ACAAGAGATACAATGTTTTCCTTTAAGACAGAATGTGTCAAGACAGACTGGAATACAGTGATGTTCATTTaGCAGTCACTGTCTCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: TRDTMFSFKTECVKTDWNTVMFI*QSLSLL Trigger: AAGGAGAGACAGTGACTGCAAAATGAACATCACTGT...ATTCCAGTCTGTCTTGACACATTCTGTCTTAAAGGAAAACATTGTATCTCTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS-3UTR CAA 90 bp | ACAAGAGATACAATGTTTTCCTTTAAGACAGAATGTGTCAAGACAGACTGGAATGGTGAAGCTGTAGTTTaGATTTTTAATGTGAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: TRDTMFSFKTECVKTDWNGEAVV*IFNVSL Trigger: AAGGCTCACATTAAAAATCAAAACTACAGCTTCACC...ATTCCAGTCTGTCTTGACACATTCTGTCTTAAAGGAAAACATTGTATCTCTTGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS-3UTR CAA 90 bp | GATCACTACAGTTTTACCTGGGTAAACTGTAGAAAGACTCATTACTTCCAAATAAATGAGAAGATTCTCTaGTACAAGTTGGTTTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: DHYSFTWVNCRKTHYFQINEKIL*YKLVFQ Trigger: CTGGAAAACCAACTTGTACAAGAGAATCTTCTCATT...TATTTGGAAGTAATGAGTCTTTCTACAGTTTACCCAGGTAAAACTGTAGTGATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS-3UTR CAA 90 bp | ACAAGAGATACAATGTTTTCCTTTAAGACAGAATGTGTCAAGACAGACTGGAATAATGAGAAGATTCTCTaGTACAAGTTGGTTTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TRDTMFSFKTECVKTDWNNEKIL*YKLVFQ Trigger: CTGGAAAACCAACTTGTACAAGAGAATCTTCTCATT...ATTCCAGTCTGTCTTGACACATTCTGTCTTAAAGGAAAACATTGTATCTCTTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS-3UTR CAA 90 bp | ACAAGAGATACAATGTTTTCCTTTAAGACAGAATGTGTCAAGACAGACTGGAATTTCAAAACCAATAATTaGCTGCGTTTTGCCATCCAA | + |
|
Preference number: 5 (lower is better) Translates to: TRDTMFSFKTECVKTDWNFKTNN*LRFAIQ Trigger: TTGGATGGCAAAACGCAGCAAATTATTGGTTTTGAA...ATTCCAGTCTGTCTTGACACATTCTGTCTTAAAGGAAAACATTGTATCTCTTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS-3UTR CAA 90 bp | ACAAGAGATACAATGTTTTCCTTTAAGACAGAATGTGTCAAGACAGACTGGAATAGTCATAAAGACACATaGTCTTATGACCCAAGTATG | + |
|
Preference number: 5 (lower is better) Translates to: TRDTMFSFKTECVKTDWNSHKDT*SYDPSM Trigger: CATACTTGGGTCATAAGACAATGTGTCTTTATGACT...ATTCCAGTCTGTCTTGACACATTCTGTCTTAAAGGAAAACATTGTATCTCTTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 ENSMUST00000215472.2 |
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| CDS CCA 72 bp | GAAATCCTTTCCACGACGCCATCCATCTTCCTCGCTTaGCATGCCGTCCTCCCTGAAGAATATCCCCTGGAC | + |
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Preference number: 6 (lower is better) Translates to: EILSTTPSIFLA*HAVLPEEYPLD Trigger: GTCCAGGGGATATTCTTCAGGGAGGACGGCATGCCAAGCGAGGAAGATGGATGGCGTCGTGGAAAGGATTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS TCA 72 bp | CATGCCGTCCTCCCTGAAGAATATCCCCTGGACACTTaGCTTGAACAGAGGGCTCTATGGATGTCTGTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: HAVLPEEYPLDT*LEQRALWMSVD Trigger: ATCCACAGACATCCATAGAGCCCTCTGTTCAAGTCAAGTGTCCAGGGGATATTCTTCAGGGAGGACGGCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS CAA 72 bp | CCGTCCTCCCTGAAGAATATCCCCTGGACACTTGACTaGAACAGAGGGCTCTATGGATGTCTGTGGATTCAC | + |
|
Preference number: 6 (lower is better) Translates to: PSSLKNIPWTLD*NRGLYGCLWIH Trigger: GTGAATCCACAGACATCCATAGAGCCCTCTGTTCAAGTCAAGTGTCCAGGGGATATTCTTCAGGGAGGACGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS TCA 72 bp | GAACCAGTTCAGCGTAGTCCGTGTCCTGATCGACAGTaGTGTTCATTTTGCAGTCACTGTCTCTCCTTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: EPVQRSPCPDRQ*CSFCSHCLSFP Trigger: TGGGAAGGAGAGACAGTGACTGCAAAATGAACATCACTGTCGATCAGGACACGGACTACGCTGAACTGGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS CCA 72 bp | ATGAGAAGATTCTCTTGTACAAGTTGGTTTTCCAGGTaGCGATCCCCGGACCTCTCTGATTCGGCTTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: MRRFSCTSWFSR*RSPDLSDSASM Trigger: CATGGAAGCCGAATCAGAGAGGTCCGGGGATCGCCACCTGGAAAACCAACTTGTACAAGAGAATCTTCTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS TCA 72 bp | ATGTTCATTTTGCAGTCACTGTCTCTCCTTCCCAGATaGAATCCTTTCCACGACGCCATCCATCTTCCTCGC | + |
|
Preference number: 6 (lower is better) Translates to: MFILQSLSLLPR*NPFHDAIHLPR Trigger: GCGAGGAAGATGGATGGCGTCGTGGAAAGGATTTCATCTGGGAAGGAGAGACAGTGACTGCAAAATGAACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS CCA 72 bp | ACACTTGACTTGAACAGAGGGCTCTATGGATGTCTGTaGATTCACATCTTTCTCCAGCTGTGGGGTGTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: TLDLNRGLYGCL*IHIFLQLWGVS Trigger: GGAAACACCCCACAGCTGGAGAAAGATGTGAATCCACAGACATCCATAGAGCCCTCTGTTCAAGTCAAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS CAA 72 bp | CTGATCGCGCACACATATGCACACACAGCTCCGGATTaGTGCACTTCGATGAATTTGCACGTGTACTTGATC | + |
|
Preference number: 6 (lower is better) Translates to: LIAHTYAHTAPD*CTSMNLHVYLI Trigger: GATCAAGTACACGTGCAAATTCATCGAAGTGCACAAATCCGGAGCTGTGTGTGCATATGTGTGCGCGATCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS CAA 90 bp | TTCTCCACTCTGATCGCGCACACATATGCACACACAGCTCCGGATTaGTGCACTTCGATGAATTTGCACGTGTACTTGATCTTCTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: FSTLIAHTYAHTAPD*CTSMNLHVYLIFSF Trigger: GAAGGAGAAGATCAAGTACACGTGCAAATTCATCGAAGTGCACAAATCCGGAGCTGTGTGTGCATATGTGTGCGCGATCAGAGTGGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS GCA 72 bp | ATCGCGCACACATATGCACACACAGCTCCGGATTTGTaGACTTCGATGAATTTGCACGTGTACTTGATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: IAHTYAHTAPDL*TSMNLHVYLIF Trigger: GAAGATCAAGTACACGTGCAAATTCATCGAAGTGCACAAATCCGGAGCTGTGTGTGCATATGTGTGCGCGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS GCA 72 bp | ACTGCTCATAGCCTTCATGTTGTGAGAATGGTTTCATaGAGAGGGCTTCTGGAGAGCATATCACCTTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: TAHSLHVVRMVS*RGLLESISPFQ Trigger: CTGGAAAGGTGATATGCTCTCCAGAAGCCCTCTGCATGAAACCATTCTCACAACATGAAGGCTATGAGCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 ENSMUST00000215472.2 |
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| CDS CAA 72 bp | ATCCAGTCCCATTCCATCTCTGGTGAAGCTGTAGTTTaGATTTTTAATGTGAGCCTTGACCACACCCCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: IQSHSISGEAVV*IFNVSLDHTPS Trigger: GGAGGGGGTGTGGTCAAGGCTCACATTAAAAATCAAAACTACAGCTTCACCAGAGATGGAATGGGACTGGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS CAA 72 bp | TTACAGACTGTTTTTCCATGGGAACTTGGTCTGGATTaGAGGAACTGCACTGCATCCGCTGCTTTCAGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LQTVFPWELGLD*RNCTASAAFSS Trigger: TGAACTGAAAGCAGCGGATGCAGTGCAGTTCCTCAAATCCAGACCAAGTTCCCATGGAAAAACAGTCTGTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS CAA 72 bp | CACGAGATCGCTCTTCTCTGCTTCAAAACCAATAATTaGCTGCGTTTTGCCATCCAAGCCAATGAACAAATA | + |
|
Preference number: 6 (lower is better) Translates to: HEIALLCFKTNN*LRFAIQANEQI Trigger: TATTTGTTCATTGGCTTGGATGGCAAAACGCAGCAAATTATTGGTTTTGAAGCAGAGAAGAGCGATCTCGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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| CDS TCA 72 bp | GTTTCACAAAAACGAAAAAGTAGTCGTTGTACTGCATaGAGTCTAGATAGTCATGAGGAAGGTGCAGGATAC | + |
|
Preference number: 6 (lower is better) Translates to: VSQKRKSSRCTA*SLDSHEEGAGY Trigger: GTATCCTGCACCTTCCTCATGACTATCTAGACTTCATGCAGTACAACGACTACTTTTTCGTTTTTGTGAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000000208.13 ENSMUST00000167596.2 |
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