Pregenerated sensors for SLFN3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000018986

Ensembl transcript IDs: ENSMUST00000019130.8, ENSMUST00000214041.2

Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	CCCACAGCCAGCCAGGAAGAGGCTCTGATTCCATGCTTCCATGTGTaGCCAGCTCTGTGTCTCTGCTCCTGTTCAGGTCCGTCTTTCATC	+
Preference number: 5 (lower is better) Translates to: PTASQEEALIPCFHV*PALCLCSCSGPSFI Trigger: GATGAAAGACGGACCTGAACAGGAGCAGAGACACAGAGCTGGCCACACATGGAAGCATGGAATCAGAGCCTCTTCCTGGCTGGCTGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214041.2
CDS GCA 90 bp	TTCCAGAGGTTCAGTCCATTATCTTCAGTTGGAAGTATGGCTGTATaGAGGCAGACACCGGTTCTGGAGAAGCCAAGAGTTCTATGGCTT	+
Preference number: 5 (lower is better) Translates to: FQRFSPLSSVGSMAV*RQTPVLEKPRVLWL Trigger: AAGCCATAGAACTCTTGGCTTCTCCAGAACCGGTGTCTGCCTGCATACAGCCATACTTCCAACTGAAGATAATGGACTGAACCTCTGGAA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214041.2
CDS CCA 90 bp	TATCTTCAGTTGGAAGTATGGCTGTATGCAGGCAGACACCGGTTCTaGAGAAGCCAAGAGTTCTATGGCTTGATCTGCAGTCAACAGAAG	+
Preference number: 5 (lower is better) Translates to: YLQLEVWLYAGRHRF*RSQEFYGLICSQQK Trigger: CTTCTGTTGACTGCAGATCAAGCCATAGAACTCTTGGCTTCTCCAGAACCGGTGTCTGCCTGCATACAGCCATACTTCCAACTGAAGATA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214041.2
CDS TCA 90 bp	ATGAATTTGCACGTGTACTTGATCTTCTCCTTCTCCCCACAGAAGTaGGTGACAGGCAGCTGTTGGATGCACTTTTCTATTTCACTCTCT	+
Preference number: 5 (lower is better) Translates to: MNLHVYLIFSFSPQK*VTGSCWMHFSISLS Trigger: AGAGAGTGAAATAGAAAAGTGCATCCAACAGCTGCCTGTCACTCACTTCTGTGGGGAGAAGGAGAAGATCAAGTACACGTGCAAATTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019130.8 ENSMUST00000214041.2
CDS TCA 90 bp	TCAACAATGATGTTTGTTTTCCAATCACTGCCTCTGTTTCCCAGATaGAGTCCTTTCTGTTTCCAGAGGTTCAGTCCATTATCTTCAGTT	+
Preference number: 5 (lower is better) Translates to: STMMFVFQSLPLFPR*SPFCFQRFSPLSSV Trigger: AACTGAAGATAATGGACTGAACCTCTGGAAACAGAAAGGACTTCATCTGGGAAACAGAGGCAGTGATTGGAAAACAAACATCATTGTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214041.2
CDS GCA 72 bp	TTCCCCACAGCCAGCCAGGAAGAGGCTCTGATTCCATaGTTCCATGTGTGGCCAGCTCTGTGTCTCTGCTCC	+
Preference number: 6 (lower is better) Translates to: FPTASQEEALIP*FHVWPALCLCS Trigger: GGAGCAGAGACACAGAGCTGGCCACACATGGAAGCATGGAATCAGAGCCTCTTCCTGGCTGGCTGTGGGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214041.2
CDS GCA 72 bp	AGCCCTTTAACTCGGCGCCTAGTTCCCCAAGAAGACTaGTGTTGCCTTCCAGGTTCTCATCTCCCTGGACAA	+
Preference number: 6 (lower is better) Translates to: SPLTRRLVPQED*CCLPGSHLPGQ Trigger: TTGTCCAGGGAGATGAGAACCTGGAAGGCAACAGCAGTCTTCTTGGGGAACTAGGCGCCGAGTTAAAGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019130.8 ENSMUST00000214041.2
CDS CAA 72 bp	GCACACACAGCTCCGGATTTGCGCACTTCGATGAATTaGCACGTGTACTTGATCTTCTCCTTCTCCCCACAG	+
Preference number: 6 (lower is better) Translates to: AHTAPDLRTSMN*HVYLIFSFSPQ Trigger: CTGTGGGGAGAAGGAGAAGATCAAGTACACGTGCAAATTCATCGAAGTGCGCAAATCCGGAGCTGTGTGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019130.8 ENSMUST00000214041.2
CDS CAA 72 bp	TTTAACTCGGCGCCTAGTTCCCCAAGAAGACTGCTGTaGCCTTCCAGGTTCTCATCTCCCTGGACAAAGACA	+
Preference number: 6 (lower is better) Translates to: FNSAPSSPRRLL*PSRFSSPWTKT Trigger: TGTCTTTGTCCAGGGAGATGAGAACCTGGAAGGCAACAGCAGTCTTCTTGGGGAACTAGGCGCCGAGTTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019130.8 ENSMUST00000214041.2
CDS CAA 72 bp	CTGAGCGCACACACATATGCACACACAGCTCCGGATTaGCGCACTTCGATGAATTTGCACGTGTACTTGATC	+
Preference number: 6 (lower is better) Translates to: LSAHTYAHTAPD*RTSMNLHVYLI Trigger: GATCAAGTACACGTGCAAATTCATCGAAGTGCGCAAATCCGGAGCTGTGTGTGCATATGTGTGTGCGCTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019130.8 ENSMUST00000214041.2
CDS CAA 72 bp	ATCCAGTCCCATTCCATCTCTGGTGAAGCTGTAGTTTaGATTTTTAATGTGAGCCTTGACCACGCCCCCTCC	+
Preference number: 6 (lower is better) Translates to: IQSHSISGEAVV*IFNVSLDHAPS Trigger: GGAGGGGGCGTGGTCAAGGCTCACATTAAAAATCAAAACTACAGCTTCACCAGAGATGGAATGGGACTGGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000019130.8 ENSMUST00000214041.2
CDS CAA 72 bp	CTGGATTCTGCTTTCTCTTCGGGATCTGTCCTGGATTaGAGGAGCTGCACTGCATTCGCTACTTTCACTTCA	+
Preference number: 6 (lower is better) Translates to: LDSAFSSGSVLD*RSCTAFATFTS Trigger: TGAAGTGAAAGTAGCGAATGCAGTGCAGCTCCTCAAATCCAGGACAGATCCCGAAGAGAAAGCAGAATCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019130.8 ENSMUST00000214041.2
CDS CAA 90 bp	GAACTTGGTCTGGATTCTGCTTTCTCTTCGGGATCTGTCCTGGATTaGAGGAGCTGCACTGCATTCGCTACTTTCACTTCATCTGAGATT	+
Preference number: 6 (lower is better) Translates to: ELGLDSAFSSGSVLD*RSCTAFATFTSSEI Trigger: AATCTCAGATGAAGTGAAAGTAGCGAATGCAGTGCAGCTCCTCAAATCCAGGACAGATCCCGAAGAGAAAGCAGAATCCAGACCAAGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019130.8 ENSMUST00000214041.2
CDS TCA 72 bp	TGGATTCTGCTTTCTCTTCGGGATCTGTCCTGGATTTaGGGAGCTGCACTGCATTCGCTACTTTCACTTCAT	+
Preference number: 6 (lower is better) Translates to: WILLSLRDLSWI*GAALHSLLSLH Trigger: ATGAAGTGAAAGTAGCGAATGCAGTGCAGCTCCTCAAATCCAGGACAGATCCCGAAGAGAAAGCAGAATCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019130.8 ENSMUST00000214041.2
CDS GCA 72 bp	GCTTTCTCTTCGGGATCTGTCCTGGATTTGAGGAGCTaGACTGCATTCGCTACTTTCACTTCATCTGAGATT	+
Preference number: 6 (lower is better) Translates to: AFSSGSVLDLRS*TAFATFTSSEI Trigger: AATCTCAGATGAAGTGAAAGTAGCGAATGCAGTGCAGCTCCTCAAATCCAGGACAGATCCCGAAGAGAAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019130.8 ENSMUST00000214041.2
CDS CCA 72 bp	TTTCTGTTTCCAGAGGTTCAGTCCATTATCTTCAGTTaGAAGTATGGCTGTATGCAGGCAGACACCGGTTCT	+
Preference number: 6 (lower is better) Translates to: FLFPEVQSIIFS*KYGCMQADTGS Trigger: AGAACCGGTGTCTGCCTGCATACAGCCATACTTCCAACTGAAGATAATGGACTGAACCTCTGGAAACAGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214041.2
CDS CCA 72 bp	TTTCATTACAGACGATTTTCCCAGGTGAACTTGGTCTaGATTCTGCTTTCTCTTCGGGATCTGTCCTGGATT	+
Preference number: 6 (lower is better) Translates to: FHYRRFSQVNLV*ILLSLRDLSWI Trigger: AATCCAGGACAGATCCCGAAGAGAAAGCAGAATCCAGACCAAGTTCACCTGGGAAAATCGTCTGTAATGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019130.8 ENSMUST00000214041.2
CDS TCA 72 bp	ATGTTTGTTTTCCAATCACTGCCTCTGTTTCCCAGATaGAGTCCTTTCTGTTTCCAGAGGTTCAGTCCATTA	+
Preference number: 6 (lower is better) Translates to: MFVFQSLPLFPR*SPFCFQRFSPL Trigger: TAATGGACTGAACCTCTGGAAACAGAAAGGACTTCATCTGGGAAACAGAGGCAGTGATTGGAAAACAAACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214041.2
CDS CAA 72 bp	ACTGCATTCGCTACTTTCACTTCATCTGAGATTGAGTaGATTCTTCTGTACAAGTTCGTTTTCAAGGTGGTG	+
Preference number: 6 (lower is better) Translates to: TAFATFTSSEIE*ILLYKFVFKVV Trigger: CACCACCTTGAAAACGAACTTGTACAGAAGAATCAACTCAATCTCAGATGAAGTGAAAGTAGCGAATGCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019130.8 ENSMUST00000214041.2
CDS CAA 72 bp	CACGAGATTGCTCTTCTCTGCTTCAAAACCAATAATTaGCTGCGTTTTGCCATCCAAGCCAATGAACAAAAA	+
Preference number: 6 (lower is better) Translates to: HEIALLCFKTNN*LRFAIQANEQK Trigger: TTTTTGTTCATTGGCTTGGATGGCAAAACGCAGCAAATTATTGGTTTTGAAGCAGAGAAGAGCAATCTCGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019130.8 ENSMUST00000214041.2

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