Pregenerated sensors for SLFN2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000072620Ensembl transcript IDs: ENSMUST00000038038.8
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAAGGGGCCCATTCCCGCCAAATCATCCTGGAGTCCAGTTTCAGGTaGCCACTGCCACAGACCCTCTGGGCCCCTTTGTCTGCGTGGAAC | + |
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Preference number: 1 (lower is better) Translates to: EGAHSRQIILESSFR*PLPQTLWAPLSAWN Trigger: GTTCCACGCAGACAAAGGGGCCCAGAGGGTCTGTGGCAGTGGTCACCTGAAACTGGACTCCAGGATGATTTGGCGGGAATGGGCCCCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038038.8 |
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| 3UTR GCA 90 bp | CAGTTTCAGGTGACCACTGCCACAGACCCTCTGGGCCCCTTTGTCTaGGTGGAACGGACACACCCCTCTAGTCTCGGGTGGACAAAGGGT | + |
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Preference number: 1 (lower is better) Translates to: QFQVTTATDPLGPFV*VERTHPSSLGWTKG Trigger: ACCCTTTGTCCACCCGAGACTAGAGGGGTGTGTCCGTTCCACGCAGACAAAGGGGCCCAGAGGGTCTGTGGCAGTGGTCACCTGAAACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038038.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGTGACCACTGCCACAGACCCTCTGGGCCCCTTTGTCTGCGTGGAACGGACAGCTAACAGTGAAACCTaGGCAACCAGGTTTCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: QVTTATDPLGPFVCVERTANSET*ATRFQA Trigger: AGCCTGAAACCTGGTTGCTCAGGTTTCACTGTTAGC...TGTCCGTTCCACGCAGACAAAGGGGCCCAGAGGGTCTGTGGCAGTGGTCACCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038038.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGTGACCACTGCCACAGACCCTCTGGGCCCCTTTGTCTGCGTGGAACGGACATACAGCTCAGATCTCTaGAAGAGCAGTCAGTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: QVTTATDPLGPFVCVERTYSSDL*KSSQCS Trigger: AGAGCACTGACTGCTCTTCCAGAGATCTGAGCTGTA...TGTCCGTTCCACGCAGACAAAGGGGCCCAGAGGGTCTGTGGCAGTGGTCACCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038038.8 |
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| 3UTR GCA 72 bp | GTGACCACTGCCACAGACCCTCTGGGCCCCTTTGTCTaGGTGGAACGGACACACCCCTCTAGTCTCGGGTGG | + |
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Preference number: 3 (lower is better) Translates to: VTTATDPLGPFV*VERTHPSSLGW Trigger: CCACCCGAGACTAGAGGGGTGTGTCCGTTCCACGCAGACAAAGGGGCCCAGAGGGTCTGTGGCAGTGGTCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038038.8 |
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| 3UTR CCA 72 bp | CCACTGCCACAGACCCTCTGGGCCCCTTTGTCTGCGTaGAACGGACACACCCCTCTAGTCTCGGGTGGACAA | + |
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Preference number: 3 (lower is better) Translates to: PLPQTLWAPLSA*NGHTPLVSGGQ Trigger: TTGTCCACCCGAGACTAGAGGGGTGTGTCCGTTCCACGCAGACAAAGGGGCCCAGAGGGTCTGTGGCAGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038038.8 |
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| 3UTR TCA 72 bp | CATTCCCGCCAAATCATCCTGGAGTCCAGTTTCAGGTaGCCACTGCCACAGACCCTCTGGGCCCCTTTGTCT | + |
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Preference number: 3 (lower is better) Translates to: HSRQIILESSFR*PLPQTLWAPLS Trigger: AGACAAAGGGGCCCAGAGGGTCTGTGGCAGTGGTCACCTGAAACTGGACTCCAGGATGATTTGGCGGGAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038038.8 |
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| 3UTR TCA 72 bp | CAGATCTCTGGAAGAGCAGTCAGTGCTCTTAGCCACTaGGCCATCTCTGCCGCCCTCATACAGATTATTAAT | + |
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Preference number: 3 (lower is better) Translates to: QISGRAVSALSH*AISAALIQIIN Trigger: ATTAATAATCTGTATGAGGGCGGCAGAGATGGCTCAGTGGCTAAGAGCACTGACTGCTCTTCCAGAGATCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038038.8 |
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| CDS-3UTR TCA 90 bp | GTGACCACTGCCACAGACCCTCTGGGCCCCTTTGTCTGCGTGGAACGGACACACCCTCACAGAAGTGAGTaGCAGGCAGCTGCCGGATGT | + |
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Preference number: 4 (lower is better) Translates to: VTTATDPLGPFVCVERTHPHRSE*QAAAGC Trigger: ACATCCGGCAGCTGCCTGTCACTCACTTCTGTGAGG...GTGTGTCCGTTCCACGCAGACAAAGGGGCCCAGAGGGTCTGTGGCAGTGGTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038038.8 |
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| CDS-3UTR TCA 90 bp | GACCACTGCCACAGACCCTCTGGGCCCCTTTGTCTGCGTGGAACGGACACACCCCTTCCAGATCAACACTaGTGCCCATTTTCCCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: DHCHRPSGPLCLRGTDTPLPDQH*CPFSQQ Trigger: CTGCTGGGAAAATGGGCATCAGTGTTGATCTGGAAG...GGGTGTGTCCGTTCCACGCAGACAAAGGGGCCCAGAGGGTCTGTGGCAGTGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038038.8 |
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| CDS-3UTR TCA 90 bp | ATGAAGGAGGGGGAAGGGGCCCATTCCCGCCAAATCATCCTGGAGTCCAGTTTCCAGGCAACTCTGGTCTaGCACAGGGTCTCCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: MKEGEGAHSRQIILESSFQATLV*HRVSLQ Trigger: CTGGAGGGAGACCCTGTGTCAGACCAGAGTTGCCTG...GAAACTGGACTCCAGGATGATTTGGCGGGAATGGGCCCCTTCCCCCTCCTTCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038038.8 |
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| CDS-3UTR TCA 90 bp | GACCACTGCCACAGACCCTCTGGGCCCCTTTGTCTGCGTGGAACGGACACACCCAGAATCTCTCCACTCTaGGCGCACACACATATGCAC | + |
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Preference number: 4 (lower is better) Translates to: DHCHRPSGPLCLRGTDTPRISPL*AHTHMH Trigger: GTGCATATGTGTGTGCGCTCAGAGTGGAGAGATTCT...GGGTGTGTCCGTTCCACGCAGACAAAGGGGCCCAGAGGGTCTGTGGCAGTGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038038.8 |
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| CDS-3UTR GCA 90 bp | CAGACCCTCTGGGCCCCTTTGTCTGCGTGGAACGGACACACCCCTCTAGTCTCGCTTCAGGGAAGGCTATaGTTGCAGGCAACTCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: QTLWAPLSAWNGHTPLVSLQGRL*LQATLV Trigger: GACCAGAGTTGCCTGCAAGCATAGCCTTCCCTGAAG...CGAGACTAGAGGGGTGTGTCCGTTCCACGCAGACAAAGGGGCCCAGAGGGTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038038.8 |
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| CDS-3UTR TCA 90 bp | ATGAAGGAGGGGGAAGGGGCCCATTCCCGCCAAATCATCCTGGAGTCCAGTTTCTTCTCCTCACAGAAGTaGGTGACAGGCAGCTGCCGG | + |
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Preference number: 4 (lower is better) Translates to: MKEGEGAHSRQIILESSFFSSQK*VTGSCR Trigger: CCGGCAGCTGCCTGTCACTCACTTCTGTGAGGAGAA...GAAACTGGACTCCAGGATGATTTGGCGGGAATGGGCCCCTTCCCCCTCCTTCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038038.8 |
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| CDS-3UTR TCA 90 bp | CAGACCCTCTGGGCCCCTTTGTCTGCGTGGAACGGACACACCCCTCTAGTCTCGTGCCATCCAAACCAATaGACAAAAATCCCCCATCCG | + |
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Preference number: 4 (lower is better) Translates to: QTLWAPLSAWNGHTPLVSCHPNQ*TKIPHP Trigger: CGGATGGGGGATTTTTGTTCATTGGTTTGGATGGCA...CGAGACTAGAGGGGTGTGTCCGTTCCACGCAGACAAAGGGGCCCAGAGGGTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000038038.8 |
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| CDS-3UTR GCA 90 bp | TTTATGAAGGAGGGGGAAGGGGCCCATTCCCGCCAAATCATCCTGGAGTCCAGTCCAGGACTCGGGCTCTaGAGCGAATACTGCACAGCA | + |
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Preference number: 4 (lower is better) Translates to: FMKEGEGAHSRQIILESSPGLGL*SEYCTA Trigger: TGCTGTGCAGTATTCGCTGCAGAGCCCGAGTCCTGG...ACTGGACTCCAGGATGATTTGGCGGGAATGGGCCCCTTCCCCCTCCTTCATAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038038.8 |
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| CDS-3UTR GCA 90 bp | CAGGTGACCACTGCCACAGACCCTCTGGGCCCCTTTGTCTGCGTGGAACGGACATCTGAGTTCTGTGGTTaGTTTGCTCAGTTGCCTCAA | + |
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Preference number: 4 (lower is better) Translates to: QVTTATDPLGPFVCVERTSEFCG*FAQLPQ Trigger: TTGAGGCAACTGAGCAAAGCAACCACAGAACTCAGA...TGTCCGTTCCACGCAGACAAAGGGGCCCAGAGGGTCTGTGGCAGTGGTCACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038038.8 |
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| CDS-3UTR GCA 90 bp | TTTATGAAGGAGGGGGAAGGGGCCCATTCCCGCCAAATCATCCTGGAGTCCAGTTCCGTGAAGTCCAGGTaGCACTGGACAAAGGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: FMKEGEGAHSRQIILESSSVKSR*HWTKGR Trigger: TCTGCCCTTTGTCCAGTGGCACCTGGACTTCACGGA...ACTGGACTCCAGGATGATTTGGCGGGAATGGGCCCCTTCCCCCTCCTTCATAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038038.8 |
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| CDS-3UTR GCA 90 bp | CATCCTGGAGTCCAGTTTCAGGTGACCACTGCCACAGACCCTCTGGGCCCCTTTGCCAAATCCTCCAGGTaGCATTCTCCTTCCACTTCA | + |
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Preference number: 4 (lower is better) Translates to: HPGVQFQVTTATDPLGPFAKSSR*HSPSTS Trigger: TGAAGTGGAAGGAGAATGGCACCTGGAGGATTTGGC...AAAGGGGCCCAGAGGGTCTGTGGCAGTGGTCACCTGAAACTGGACTCCAGGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038038.8 |
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| CDS-3UTR GCA 90 bp | GCCACAGACCCTCTGGGCCCCTTTGTCTGCGTGGAACGGACACACCCCTCTAGTTGTCCTGTTAAACAATaGAGCAGCCAAATCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: ATDPLGPFVCVERTHPSSCPVKQ*SSQILQ Trigger: CTGGAGGATTTGGCTGCTGCATTGTTTAACAGGACA...ACTAGAGGGGTGTGTCCGTTCCACGCAGACAAAGGGGCCCAGAGGGTCTGTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038038.8 |
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| CDS-3UTR TCA 90 bp | TCATCCTGGAGTCCAGTTTCAGGTGACCACTGCCACAGACCCTCTGGGCCCCTTAAAGCAGAAACAGTTTaGGGGAGGAGCTCTTTGATG | + |
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Preference number: 4 (lower is better) Translates to: SSWSPVSGDHCHRPSGPLKAETV*GRSSLM Trigger: CATCAAAGAGCTCCTCCCTCAAACTGTTTCTGCTTT...AAGGGGCCCAGAGGGTCTGTGGCAGTGGTCACCTGAAACTGGACTCCAGGATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038038.8 |
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| CDS-3UTR GCA 90 bp | CATCCTGGAGTCCAGTTTCAGGTGACCACTGCCACAGACCCTCTGGGCCCCTTTGTTCTGTGGTTGCTTTaGTCAGTTGCCTCAAGTCTA | + |
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Preference number: 4 (lower is better) Translates to: HPGVQFQVTTATDPLGPFVLWLL*SVASSL Trigger: TAGACTTGAGGCAACTGAGCAAAGCAACCACAGAAC...AAAGGGGCCCAGAGGGTCTGTGGCAGTGGTCACCTGAAACTGGACTCCAGGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038038.8 |
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| CDS-3UTR CCA 90 bp | ATGAAGGAGGGGGAAGGGGCCCATTCCCGCCAAATCATCCTGGAGTCCAGTTTCAAGTCCAGGTGCCACTaGACAAAGGGCAGACATTTA | + |
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Preference number: 4 (lower is better) Translates to: MKEGEGAHSRQIILESSFKSRCH*TKGRHL Trigger: TAAATGTCTGCCCTTTGTCCAGTGGCACCTGGACTT...GAAACTGGACTCCAGGATGATTTGGCGGGAATGGGCCCCTTCCCCCTCCTTCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038038.8 |
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| CDS-3UTR GCA 90 bp | GAAGAGCAGTCAGTGCTCTTAGCCACTGAGCCATCTCTGCCGCCCTCATACAGAGGCAGCTGCCGGATGTaGTTTTCTATTTCACTCTCT | + |
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Preference number: 4 (lower is better) Translates to: EEQSVLLATEPSLPPSYRGSCRM*FSISLS Trigger: AGAGAGTGAAATAGAAAAGCACATCCGGCAGCTGCC...TCTGTATGAGGGCGGCAGAGATGGCTCAGTGGCTAAGAGCACTGACTGCTCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038038.8 |
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| CDS-3UTR CCA 90 bp | GAAGAGCAGTCAGTGCTCTTAGCCACTGAGCCATCTCTGCCGCCCTCATACAGAGATGGGGCATTCATCTaGAGTTTCACCCATTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: EEQSVLLATEPSLPPSYRDGAFI*SFTHSS Trigger: AGAGGAATGGGTGAAACTCCAGATGAATGCCCCATC...TCTGTATGAGGGCGGCAGAGATGGCTCAGTGGCTAAGAGCACTGACTGCTCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038038.8 |
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| CDS-3UTR TCA 90 bp | GAAGAGCAGTCAGTGCTCTTAGCCACTGAGCCATCTCTGCCGCCCTCATACAGAATTTGCACGTGTACTTaGTCTTCTCCTTCTCCTCAC | + |
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Preference number: 4 (lower is better) Translates to: EEQSVLLATEPSLPPSYRICTCT*SSPSPH Trigger: GTGAGGAGAAGGAGAAGATCAAGTACACGTGCAAAT...TCTGTATGAGGGCGGCAGAGATGGCTCAGTGGCTAAGAGCACTGACTGCTCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038038.8 |
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| CDS-3UTR GCA 90 bp | GAAGAGCAGTCAGTGCTCTTAGCCACTGAGCCATCTCTGCCGCCCTCATACAGATCCCCCATCCGTGTTTaGAAAAGCAGAAACAGTTTG | + |
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Preference number: 4 (lower is better) Translates to: EEQSVLLATEPSLPPSYRSPIRV*KSRNSL Trigger: CAAACTGTTTCTGCTTTTGCAAACACGGATGGGGGA...TCTGTATGAGGGCGGCAGAGATGGCTCAGTGGCTAAGAGCACTGACTGCTCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038038.8 |
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| CDS-3UTR TCA 90 bp | TCATCCTGGAGTCCAGTTTCAGGTGACCACTGCCACAGACCCTCTGGGCCCCTTAAAGTTTCCTCGTACTaGAATTCTGTCCTGTTAAAC | + |
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Preference number: 4 (lower is better) Translates to: SSWSPVSGDHCHRPSGPLKVSSY*NSVLLN Trigger: GTTTAACAGGACAGAATTTCAGTACGAGGAAACTTT...AAGGGGCCCAGAGGGTCTGTGGCAGTGGTCACCTGAAACTGGACTCCAGGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038038.8 |
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| CDS-3UTR GCA 90 bp | CATCCTGGAGTCCAGTTTCAGGTGACCACTGCCACAGACCCTCTGGGCCCCTTTGTACAGAAGATGACATaGTCCTTACATACAAATTGG | + |
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Preference number: 4 (lower is better) Translates to: HPGVQFQVTTATDPLGPFVQKMT*SLHTNW Trigger: CCAATTTGTATGTAAGGAGCATGTCATCTTCTGTAC...AAAGGGGCCCAGAGGGTCTGTGGCAGTGGTCACCTGAAACTGGACTCCAGGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038038.8 |
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| CDS-3UTR GCA 90 bp | TCATCCTGGAGTCCAGTTTCAGGTGACCACTGCCACAGACCCTCTGGGCCCCTTTCAAAACCAATAATTTaGTGGGTTTTGCCATCCAAA | + |
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Preference number: 4 (lower is better) Translates to: SSWSPVSGDHCHRPSGPLSKPII*WVLPSK Trigger: TTTGGATGGCAAAACCCAGCAAATTATTGGTTTTGA...AAGGGGCCCAGAGGGTCTGTGGCAGTGGTCACCTGAAACTGGACTCCAGGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038038.8 |
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| CDS-3UTR TCA 90 bp | GAAGAGCAGTCAGTGCTCTTAGCCACTGAGCCATCTCTGCCGCCCTCATACAGACATTCTCCTGTTTTCTaGGGTGAGAATTCTTCATTT | + |
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Preference number: 4 (lower is better) Translates to: EEQSVLLATEPSLPPSYRHSPVF*GENSSF Trigger: AAATGAAGAATTCTCACCTCAGAAAACAGGAGAATG...TCTGTATGAGGGCGGCAGAGATGGCTCAGTGGCTAAGAGCACTGACTGCTCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038038.8 |
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| CDS-3UTR CAA 90 bp | GACCACTGCCACAGACCCTCTGGGCCCCTTTGTCTGCGTGGAACGGACACACCCATCCCCCATCCGTGTTaGCAAAAGCAGAAACAGTTT | + |
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Preference number: 5 (lower is better) Translates to: DHCHRPSGPLCLRGTDTPIPHPC*QKQKQF Trigger: AAACTGTTTCTGCTTTTGCAAACACGGATGGGGGAT...GGGTGTGTCCGTTCCACGCAGACAAAGGGGCCCAGAGGGTCTGTGGCAGTGGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038038.8 |
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| CDS GCA 90 bp | ATCCTCCAGGTGCCATTCTCCTTCCACTTCAGGGAAGGCTATGCTTaGAGGCAACTCTGGTCTGACACAGGGTCTCCCTCCAGTTTCCTC | + |
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Preference number: 5 (lower is better) Translates to: ILQVPFSFHFREGYA*RQLWSDTGSPSSFL Trigger: GAGGAAACTGGAGGGAGACCCTGTGTCAGACCAGAGTTGCCTGCAAGCATAGCCTTCCCTGAAGTGGAAGGAGAATGGCACCTGGAGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038038.8 |
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| CDS CCA 90 bp | AACTCTGGTCTGACACAGGGTCTCCCTCCAGTTTCCTCCAGGTCCTaGAGAAATTCCAGGGCAGCAGCGGCGCTCACTTGTACAGAAGAT | + |
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Preference number: 5 (lower is better) Translates to: NSGLTQGLPPVSSRS*RNSRAAAALTCTED Trigger: ATCTTCTGTACAAGTGAGCGCCGCTGCTGCCCTGGAATTTCTCCAGGACCTGGAGGAAACTGGAGGGAGACCCTGTGTCAGACCAGAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038038.8 |
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| CDS TCA 90 bp | CTCCTTCCACTTCAGGGAAGGCTATGCTTGCAGGCAACTCTGGTCTaGCACAGGGTCTCCCTCCAGTTTCCTCCAGGTCCTGGAGAAATT | + |
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Preference number: 5 (lower is better) Translates to: LLPLQGRLCLQATLV*HRVSLQFPPGPGEI Trigger: AATTTCTCCAGGACCTGGAGGAAACTGGAGGGAGACCCTGTGTCAGACCAGAGTTGCCTGCAAGCATAGCCTTCCCTGAAGTGGAAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038038.8 |
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| CDS-3UTR CAA 90 bp | GACCACTGCCACAGACCCTCTGGGCCCCTTTGTCTGCGTGGAACGGACACACCCCTCCTTACATACAAATaGGTTCTTAGGGTGCCAATA | + |
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Preference number: 5 (lower is better) Translates to: DHCHRPSGPLCLRGTDTPLLTYK*VLRVPI Trigger: TATTGGCACCCTAAGAACCAATTTGTATGTAAGGAG...GGGTGTGTCCGTTCCACGCAGACAAAGGGGCCCAGAGGGTCTGTGGCAGTGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038038.8 |
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| CDS-3UTR CAA 90 bp | CAGGTGACCACTGCCACAGACCCTCTGGGCCCCTTTGTCTGCGTGGAACGGACAAATTTGCACGTGTACTaGATCTTCTCCTTCTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: QVTTATDPLGPFVCVERTNLHVY*IFSFSS Trigger: TGAGGAGAAGGAGAAGATCAAGTACACGTGCAAATT...TGTCCGTTCCACGCAGACAAAGGGGCCCAGAGGGTCTGTGGCAGTGGTCACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038038.8 |
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| CDS-3UTR CAA 90 bp | TCATCCTGGAGTCCAGTTTCAGGTGACCACTGCCACAGACCCTCTGGGCCCCTTTTTTCCCAGCAGCCTTaGCATTTTCCAGCTGAATGT | + |
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Preference number: 5 (lower is better) Translates to: SSWSPVSGDHCHRPSGPLFSQQP*HFPAEC Trigger: ACATTCAGCTGGAAAATGCAAAGGCTGCTGGGAAAA...AAGGGGCCCAGAGGGTCTGTGGCAGTGGTCACCTGAAACTGGACTCCAGGATGA 53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000038038.8 |
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| CDS-3UTR CAA 90 bp | CAGGTGACCACTGCCACAGACCCTCTGGGCCCCTTTGTCTGCGTGGAACGGACAATAATTTGCTGGGTTTaGCCATCCAAACCAATGAAC | + |
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Preference number: 5 (lower is better) Translates to: QVTTATDPLGPFVCVERTIICWV*PSKPMN Trigger: GTTCATTGGTTTGGATGGCAAAACCCAGCAAATTAT...TGTCCGTTCCACGCAGACAAAGGGGCCCAGAGGGTCTGTGGCAGTGGTCACCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038038.8 |
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| CDS-3UTR CAA 90 bp | GAAGAGCAGTCAGTGCTCTTAGCCACTGAGCCATCTCTGCCGCCCTCATACAGACAGCCCAAAGATTTCTaGGCTCCACGATTTCACGTA | + |
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Preference number: 5 (lower is better) Translates to: EEQSVLLATEPSLPPSYRQPKDF*APRFHV Trigger: TACGTGAAATCGTGGAGCCAAGAAATCTTTGGGCTG...TCTGTATGAGGGCGGCAGAGATGGCTCAGTGGCTAAGAGCACTGACTGCTCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038038.8 |
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| CDS TCA 90 bp | ATGAATTTGCACGTGTACTTGATCTTCTCCTTCTCCTCACAGAAGTaGGTGACAGGCAGCTGCCGGATGTGCTTTTCTATTTCACTCTCT | + |
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Preference number: 5 (lower is better) Translates to: MNLHVYLIFSFSSQK*VTGSCRMCFSISLS Trigger: AGAGAGTGAAATAGAAAAGCACATCCGGCAGCTGCCTGTCACTCACTTCTGTGAGGAGAAGGAGAAGATCAAGTACACGTGCAAATTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038038.8 |
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| CDS TCA 90 bp | ACTTCAACATATCTGGATCTGGTAAAGGGGAAAGTTTCCTCGTACTaGAATTCTGTCCTGTTAAACAATGCAGCAGCCAAATCCTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: TSTYLDLVKGKVSSY*NSVLLNNAAAKSSR Trigger: CCTGGAGGATTTGGCTGCTGCATTGTTTAACAGGACAGAATTTCAGTACGAGGAAACTTTCCCCTTTACCAGATCCAGATATGTTGAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038038.8 |
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| CDS GCA 72 bp | TCTGTGGTAAACCTCTTCACACAGCCGCCTTCCACATaGCAGGACTCGGGCTCTGCAGCGAATACTGCACAG | + |
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Preference number: 6 (lower is better) Translates to: SVVNLFTQPPST*QDSGSAANTAQ Trigger: CTGTGCAGTATTCGCTGCAGAGCCCGAGTCCTGGCATGTGGAAGGCGGCTGTGTGAAGAGGTTTACCACAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038038.8 |
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| CDS GCA 72 bp | GGGCAGCAGCGGCGCTCACTTGTACAGAAGATGACATaGTCCTTACATACAAATTGGTTCTTAGGGTGCCAA | + |
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Preference number: 6 (lower is better) Translates to: GQQRRSLVQKMT*SLHTNWFLGCQ Trigger: TTGGCACCCTAAGAACCAATTTGTATGTAAGGAGCATGTCATCTTCTGTACAAGTGAGCGCCGCTGCTGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038038.8 |
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| CDS GCA 72 bp | GTCCTGTTAAACAATGCAGCAGCCAAATCCTCCAGGTaGCATTCTCCTTCCACTTCAGGGAAGGCTATGCTT | + |
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Preference number: 6 (lower is better) Translates to: VLLNNAAAKSSR*HSPSTSGKAML Trigger: AAGCATAGCCTTCCCTGAAGTGGAAGGAGAATGGCACCTGGAGGATTTGGCTGCTGCATTGTTTAACAGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038038.8 |
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| CDS CAA 72 bp | CTGAGCGCACACACATATGCACACACAGCTCCGGATTaGTGCACTTCGATGAATTTGCACGTGTACTTGATC | + |
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Preference number: 6 (lower is better) Translates to: LSAHTYAHTAPD*CTSMNLHVYLI Trigger: GATCAAGTACACGTGCAAATTCATCGAAGTGCACAAATCCGGAGCTGTGTGTGCATATGTGTGTGCGCTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038038.8 |
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| CDS TCA 72 bp | ATTTCACGTAGATATAAATGTAGCCTTCGCTCTCCGTaGAGTCCAGGTGCCACTGGACAAAGGGCAGACATT | + |
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Preference number: 6 (lower is better) Translates to: ISRRYKCSLRSP*SPGATGQRADI Trigger: AATGTCTGCCCTTTGTCCAGTGGCACCTGGACTTCACGGAGAGCGAAGGCTACATTTATATCTACGTGAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038038.8 |
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| CDS GCA 72 bp | AGCGCACACACATATGCACACACAGCTCCGGATTTGTaGACTTCGATGAATTTGCACGTGTACTTGATCTTC | + |
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Preference number: 6 (lower is better) Translates to: SAHTYAHTAPDL*TSMNLHVYLIF Trigger: GAAGATCAAGTACACGTGCAAATTCATCGAAGTGCACAAATCCGGAGCTGTGTGTGCATATGTGTGTGCGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038038.8 |
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| CDS TCA 72 bp | GAGGAGCTCTTTGATGCGTTTTCGCAGGCGTTTCGCTaGAAGCAATGTAACTTCAACATATCTGGATCTGGT | + |
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Preference number: 6 (lower is better) Translates to: EELFDAFSQAFR*KQCNFNISGSG Trigger: ACCAGATCCAGATATGTTGAAGTTACATTGCTTTCAGCGAAACGCCTGCGAAAACGCATCAAAGAGCTCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038038.8 |
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| CDS CAA 72 bp | GTGATTGCTCCGAGATTTAGACCCAGCTTAGCATATTaGGCTTCCAGATCAACACTGATGCCCATTTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: VIAPRFRPSLAY*ASRSTLMPIFP Trigger: TGGGAAAATGGGCATCAGTGTTGATCTGGAAGCCAAATATGCTAAGCTGGGTCTAAATCTCGGAGCAATCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038038.8 |
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| CDS TCA 72 bp | TATCTGGATCTGGTAAAGGGGAAAGTTTCCTCGTACTaGAATTCTGTCCTGTTAAACAATGCAGCAGCCAAA | + |
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Preference number: 6 (lower is better) Translates to: YLDLVKGKVSSY*NSVLLNNAAAK Trigger: TTTGGCTGCTGCATTGTTTAACAGGACAGAATTTCAGTACGAGGAAACTTTCCCCTTTACCAGATCCAGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038038.8 |
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| CDS CAA 72 bp | ACTTGTACAGAAGATGACATGCTCCTTACATACAAATaGGTTCTTAGGGTGCCAATAGGCAGCCCAAAGATT | + |
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Preference number: 6 (lower is better) Translates to: TCTEDDMLLTYK*VLRVPIGSPKI Trigger: AATCTTTGGGCTGCCTATTGGCACCCTAAGAACCAATTTGTATGTAAGGAGCATGTCATCTTCTGTACAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038038.8 |
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