Pregenerated sensors for SLFN14 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000082101Ensembl transcript IDs: ENSMUST00000163961.3
Found 169 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GATGTTAGCCCAGGTACTGCCTTCAAGACACCCAATCCAAGTATTTaGTCTAAAGGATATCCTACCATCACTCCCAAAGCAGCTACAGAT | + |
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Preference number: 1 (lower is better) Translates to: DVSPGTAFKTPNPSI*SKGYPTITPKAATD Trigger: ATCTGTAGCTGCTTTGGGAGTGATGGTAGGATATCCTTTAGACCAAATACTTGGATTGGGTGTCTTGAAGGCAGTACCTGGGCTAACATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| 3UTR TCA 90 bp | GCAGAGAATTTCATAAAATTCACATTCTGTTTTAGGCTCTTTGGGTaGCAGAATGAGAGCTGGATTGAGTCGGGAAGATTGGAGGCAGAG | + |
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Preference number: 1 (lower is better) Translates to: AENFIKFTFCFRLFG*QNESWIESGRLEAE Trigger: CTCTGCCTCCAATCTTCCCGACTCAATCCAGCTCTCATTCTGTCACCCAAAGAGCCTAAAACAGAATGTGAATTTTATGAAATTCTCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| 3UTR CCA 90 bp | CTTCATTCATTCACTTGTCATATTAAAAAGGAGCTACCACTCATTTaGAAGGAGAGTGTTCTTGTTTGGCTTCCTGTATTATTTACAACA | + |
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Preference number: 1 (lower is better) Translates to: LHSFTCHIKKELPLI*KESVLVWLPVLFTT Trigger: TGTTGTAAATAATACAGGAAGCCAAACAAGAACACTCTCCTTCCAAATGAGTGGTAGCTCCTTTTTAATATGACAAGTGAATGAATGAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| 3UTR-3UTR CCA 90 bp | GTCGGGGGTGTGATCAAGGATGGAGTCAGGAGAGGAAGTAGGTACCATGGAGAGTTGAGTCGGGAAGATTaGAGGCAGAGAATCAGTCAT | + |
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Preference number: 2 (lower is better) Translates to: VGGVIKDGVRRGSRYHGELSRED*RQRISH Trigger: ATGACTGATTCTCTGCCTCCAATCTTCCCGACTCAA...CTCTCCATGGTACCTACTTCCTCTCCTGACTCCATCCTTGATCACACCCCCGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| 3UTR CAA 90 bp | GAGTCAGGAGAGGAAGTAGGTACCATGGAGAGCCTCAGAAATGTATaGCATTCGAGGGTCACAGGAACTCCCTGGAGCAGAGAATTTCAT | + |
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Preference number: 2 (lower is better) Translates to: ESGEEVGTMESLRNV*HSRVTGTPWSREFH Trigger: ATGAAATTCTCTGCTCCAGGGAGTTCCTGTGACCCTCGAATGCAATACATTTCTGAGGCTCTCCATGGTACCTACTTCCTCTCCTGACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| 3UTR-3UTR TCA 90 bp | GAGGAAGTAGGTACCATGGAGAGCCTCAGAAATGTATTGCATTCGAGGGTCACATTTAGGCTCTTTGGGTaGCAGAATGAGAGCTGGATT | + |
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Preference number: 2 (lower is better) Translates to: EEVGTMESLRNVLHSRVTFRLFG*QNESWI Trigger: AATCCAGCTCTCATTCTGTCACCCAAAGAGCCTAAA...TGTGACCCTCGAATGCAATACATTTCTGAGGCTCTCCATGGTACCTACTTCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| 3UTR-3UTR CCA 90 bp | GTGATCAAGGATGGAGTCAGGAGAGGAAGTAGGTACCATGGAGAGCCTCAGAAAGTCACAGGAACTCCCTaGAGCAGAGAATTTCATAAA | + |
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Preference number: 2 (lower is better) Translates to: VIKDGVRRGSRYHGEPQKVTGTP*SREFHK Trigger: TTTATGAAATTCTCTGCTCCAGGGAGTTCCTGTGAC...TTTCTGAGGCTCTCCATGGTACCTACTTCCTCTCCTGACTCCATCCTTGATCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| 3UTR-3UTR GCA 90 bp | CACCCAATCCAAGTATTTGGTCTAAAGGATATCCTACCATCACTCCCAAAGCAGCTACAGATCAGGGACTaGATTAGAAACGCTGGGAGT | + |
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Preference number: 2 (lower is better) Translates to: HPIQVFGLKDILPSLPKQLQIRD*IRNAGS Trigger: ACTCCCAGCGTTTCTAATGCAGTCCCTGATCTGTAG...CTGCTTTGGGAGTGATGGTAGGATATCCTTTAGACCAAATACTTGGATTGGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| 3UTR-3UTR CCA 90 bp | ATTTGGTCTAAAGGATATCCTACCATCACTCCCAAAGCAGCTACAGATCAGGGAGAGAGTGTTCTTGTTTaGCTTCCTGTATTATTTACA | + |
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Preference number: 2 (lower is better) Translates to: IWSKGYPTITPKAATDQGESVLV*LPVLFT Trigger: TGTAAATAATACAGGAAGCCAAACAAGAACACTCTC...TCCCTGATCTGTAGCTGCTTTGGGAGTGATGGTAGGATATCCTTTAGACCAAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| 3UTR CAA 90 bp | AGCTTTTTCTTTTTCTATTTCTTAAGCTGGTGTGATAATATTCTGTaGCCCTCCAACAATGTCTTAGGAGCATCACACCACAAGCAACTC | + |
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Preference number: 2 (lower is better) Translates to: SFFFFYFLSWCDNIL*PSNNVLGASHHKQL Trigger: GAGTTGCTTGTGGTGTGATGCTCCTAAGACATTGTTGGAGGGCAACAGAATATTATCACACCAGCTTAAGAAATAGAAAAAGAAAAAGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| 3UTR GCA 72 bp | CTACCATCACTCCCAAAGCAGCTACAGATCAGGGACTaGATTAGAAACGCTGGGAGTCGGGGGTGTGATCAA | + |
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Preference number: 3 (lower is better) Translates to: LPSLPKQLQIRD*IRNAGSRGCDQ Trigger: TTGATCACACCCCCGACTCCCAGCGTTTCTAATGCAGTCCCTGATCTGTAGCTGCTTTGGGAGTGATGGTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| 3UTR-3UTR CAA 90 bp | CTGGGAGTCGGGGGTGTGATCAAGGATGGAGTCAGGAGAGGAAGTAGGTACCATGGAGCTACCACTCATTaGGAAGGAGAGTGTTCTTGT | + |
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Preference number: 3 (lower is better) Translates to: LGVGGVIKDGVRRGSRYHGATTH*EGECSC Trigger: ACAAGAACACTCTCCTTCCAAATGAGTGGTAGCTCC...ATGGTACCTACTTCCTCTCCTGACTCCATCCTTGATCACACCCCCGACTCCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| 3UTR-3UTR CAA 90 bp | TGTGATAATATTCTGTTGCCCTCCAACAATGTCTTAGGAGCATCACACCACAAGATGTCTCTGCAAAGCTaGAGCCCCACAGCCCACATG | + |
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Preference number: 3 (lower is better) Translates to: CDNILLPSNNVLGASHHKMSLQS*SPTAHM Trigger: CATGTGGGCTGTGGGGCTCAAGCTTTGCAGAGACAT...CTTGTGGTGTGATGCTCCTAAGACATTGTTGGAGGGCAACAGAATATTATCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| 3UTR-3UTR CAA 90 bp | GTGATCAAGGATGGAGTCAGGAGAGGAAGTAGGTACCATGGAGAGCCTCAGAAAGGAAGGAGAGTGTTCTaGTTTGGCTTCCTGTATTAT | + |
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Preference number: 3 (lower is better) Translates to: VIKDGVRRGSRYHGEPQKGRRVF*FGFLYY Trigger: ATAATACAGGAAGCCAAACAAGAACACTCTCCTTCC...TTTCTGAGGCTCTCCATGGTACCTACTTCCTCTCCTGACTCCATCCTTGATCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| 3UTR CCA 72 bp | CCAGGTACTGCCTTCAAGACACCCAATCCAAGTATTTaGTCTAAAGGATATCCTACCATCACTCCCAAAGCA | + |
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Preference number: 3 (lower is better) Translates to: PGTAFKTPNPSI*SKGYPTITPKA Trigger: TGCTTTGGGAGTGATGGTAGGATATCCTTTAGACCAAATACTTGGATTGGGTGTCTTGAAGGCAGTACCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| 3UTR-3UTR CAA 90 bp | ATTTGGTCTAAAGGATATCCTACCATCACTCCCAAAGCAGCTACAGATCAGGGAGGAGAGTGTTCTTGTTaGGCTTCCTGTATTATTTAC | + |
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Preference number: 3 (lower is better) Translates to: IWSKGYPTITPKAATDQGGECSC*ASCIIY Trigger: GTAAATAATACAGGAAGCCAAACAAGAACACTCTCC...TCCCTGATCTGTAGCTGCTTTGGGAGTGATGGTAGGATATCCTTTAGACCAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| 3UTR CCA 72 bp | TTCACTTGTCATATTAAAAAGGAGCTACCACTCATTTaGAAGGAGAGTGTTCTTGTTTGGCTTCCTGTATTA | + |
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Preference number: 3 (lower is better) Translates to: FTCHIKKELPLI*KESVLVWLPVL Trigger: TAATACAGGAAGCCAAACAAGAACACTCTCCTTCCAAATGAGTGGTAGCTCCTTTTTAATATGACAAGTGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS-3UTR GCA 90 bp | GCAAAGGGTCCAGCCACACCGCTGGACCAGAAACACATCTCTGAGGCTCCAAGCCCCAGAATTCAGCAGTaGGCACACAGCCTGGACGAG | + |
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Preference number: 4 (lower is better) Translates to: AKGPATPLDQKHISEAPSPRIQQ*AHSLDE Trigger: CTCGTCCAGGCTGTGTGCGCACTGCTGAATTCTGGG...GCTTGGAGCCTCAGAGATGTGTTTCTGGTCCAGCGGTGTGGCTGGACCCTTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS-3UTR CCA 90 bp | GTCGGGGGTGTGATCAAGGATGGAGTCAGGAGAGGAAGTAGGTACCATGGAGAGCGTTGCCAGGGTGTCTaGAAGGCCCATGGAGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: VGGVIKDGVRRGSRYHGERCQGV*KAHGGR Trigger: CCTCCCTCCATGGGCCTTCCAGACACCCTGGCAACG...CTCTCCATGGTACCTACTTCCTCTCCTGACTCCATCCTTGATCACACCCCCGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS-3UTR GCA 90 bp | CTCCCAAAGCAGCTACAGATCAGGGACTGCATTAGAAACGCTGGGAGTCGGGGGCAGGTCTGGACCCTCTaGTGGCCAGGTATATCACCC | + |
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Preference number: 4 (lower is better) Translates to: LPKQLQIRDCIRNAGSRGQVWTL*WPGISP Trigger: GGGTGATATACCTGGCCAGCAGAGGGTCCAGACCTG...CCCCCGACTCCCAGCGTTTCTAATGCAGTCCCTGATCTGTAGCTGCTTTGGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS-3UTR CCA 90 bp | CAAAGGGTCCAGCCACACCGCTGGACCAGAAACACATCTCTGAGGCTCCAAGCCTTTCCTGGAGGTTCCTaGAGAGTGTGTTGGCTTGCT | + |
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Preference number: 4 (lower is better) Translates to: QRVQPHRWTRNTSLRLQAFPGGS*RVCWLA Trigger: AGCAAGCCAACACACTCTCCAGGAACCTCCAGGAAA...GGCTTGGAGCCTCAGAGATGTGTTTCTGGTCCAGCGGTGTGGCTGGACCCTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS-3UTR TCA 90 bp | CAAAGGGTCCAGCCACACCGCTGGACCAGAAACACATCTCTGAGGCTCCAAGCCCAGTCCTTCGTGATCTaGGAACAGCTTCTTACAGAG | + |
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Preference number: 4 (lower is better) Translates to: QRVQPHRWTRNTSLRLQAQSFVI*EQLLTE Trigger: CTCTGTAAGAAGCTGTTCTCAGATCACGAAGGACTG...GGCTTGGAGCCTCAGAGATGTGTTTCTGGTCCAGCGGTGTGGCTGGACCCTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS-3UTR GCA 90 bp | GTCGGGGGTGTGATCAAGGATGGAGTCAGGAGAGGAAGTAGGTACCATGGAGAGCCTCCACTTCAGCTTTaGTGGACAGTGTGTAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: VGGVIKDGVRRGSRYHGEPPLQL*WTVCRV Trigger: GACCCTACACACTGTCCAGCAAAGCTGAAGTGGAGG...CTCTCCATGGTACCTACTTCCTCTCCTGACTCCATCCTTGATCACACCCCCGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS-3UTR CCA 90 bp | AGGGTCCAGCCACACCGCTGGACCAGAAACACATCTCTGAGGCTCCAAGCCATACATGATCCAGGAATCTaGGTCCTCTGCAAACACGAC | + |
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Preference number: 4 (lower is better) Translates to: RVQPHRWTRNTSLRLQAIHDPGI*VLCKHD Trigger: GTCGTGTTTGCAGAGGACCCAGATTCCTGGATCATG...TATGGCTTGGAGCCTCAGAGATGTGTTTCTGGTCCAGCGGTGTGGCTGGACCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS-3UTR TCA 90 bp | GTCAGGAGAGGAAGTAGGTACCATGGAGAGCCTCAGAAATGTATTGCATTCGAGGTCCAGGTGCTTCTGTaGCCCCGATGGGAGGAGCTT | + |
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Preference number: 4 (lower is better) Translates to: VRRGSRYHGEPQKCIAFEVQVLL*PRWEEL Trigger: AAGCTCCTCCCATCGGGGTCACAGAAGCACCTGGAC...CTCGAATGCAATACATTTCTGAGGCTCTCCATGGTACCTACTTCCTCTCCTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS-3UTR GCA 90 bp | GTCCAGCCACACCGCTGGACCAGAAACACATCTCTGAGGCTCCAAGCCATAATGGTGAGGGTGTTCATTTaGAGCCCCGTTTGCTTTTGG | + |
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Preference number: 4 (lower is better) Translates to: VQPHRWTRNTSLRLQAIMVRVFI*SPVCFW Trigger: CCAAAAGCAAACGGGGCTGCAAATGAACACCCTCAC...CATTATGGCTTGGAGCCTCAGAGATGTGTTTCTGGTCCAGCGGTGTGGCTGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS-3UTR TCA 90 bp | CTGGGAGTCGGGGGTGTGATCAAGGATGGAGTCAGGAGAGGAAGTAGGTACCATCTTCTAAGCACTGCTTaGAGAACTCACAGCCTAGCT | + |
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Preference number: 4 (lower is better) Translates to: LGVGGVIKDGVRRGSRYHLLSTA*RTHSLA Trigger: AGCTAGGCTGTGAGTTCTTCAAGCAGTGCTTAGAAG...ATGGTACCTACTTCCTCTCCTGACTCCATCCTTGATCACACCCCCGACTCCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS-3UTR TCA 90 bp | GTCGGGGGTGTGATCAAGGATGGAGTCAGGAGAGGAAGTAGGTACCATGGAGAGTTTATGAACGCCTTCTaGGTGCACAGATTCAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: VGGVIKDGVRRGSRYHGEFMNAF*VHRFRA Trigger: TGCCCTGAATCTGTGCACTCAGAAGGCGTTCATAAA...CTCTCCATGGTACCTACTTCCTCTCCTGACTCCATCCTTGATCACACCCCCGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS-3UTR CCA 90 bp | GTGATCAAGGATGGAGTCAGGAGAGGAAGTAGGTACCATGGAGAGCCTCAGAAAAGTGCGCACACAGCCTaGACGAGACTCGAGTTCTCA | + |
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Preference number: 4 (lower is better) Translates to: VIKDGVRRGSRYHGEPQKSAHTA*TRLEFS Trigger: TGAGAACTCGAGTCTCGTCCAGGCTGTGTGCGCACT...TTTCTGAGGCTCTCCATGGTACCTACTTCCTCTCCTGACTCCATCCTTGATCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS-3UTR CCA 90 bp | AGGGTCCAGCCACACCGCTGGACCAGAAACACATCTCTGAGGCTCCAAGCCATACTCTTCCAGTCGAACTaGGGTCTGTTAGGATTGTAT | + |
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Preference number: 4 (lower is better) Translates to: RVQPHRWTRNTSLRLQAILFQSN*GLLGLY Trigger: ATACAATCCTAACAGACCCCAGTTCGACTGGAAGAG...TATGGCTTGGAGCCTCAGAGATGTGTTTCTGGTCCAGCGGTGTGGCTGGACCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS-3UTR TCA 90 bp | CTCCCAAAGCAGCTACAGATCAGGGACTGCATTAGAAACGCTGGGAGTCGGGGGATATCTTCCTCTTCCTaGATGGTTCTGTTGAGGATG | + |
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Preference number: 4 (lower is better) Translates to: LPKQLQIRDCIRNAGSRGISSSS*MVLLRM Trigger: CATCCTCAACAGAACCATTCAGGAAGAGGAAGATAT...CCCCCGACTCCCAGCGTTTCTAATGCAGTCCCTGATCTGTAGCTGCTTTGGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS-3UTR TCA 90 bp | GTCGGGGGTGTGATCAAGGATGGAGTCAGGAGAGGAAGTAGGTACCATGGAGAGGTTTTCTTGTGTCACTaGAAAGAAATGGCGCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: VGGVIKDGVRRGSRYHGEVFLCH*KEMALQ Trigger: CTGCAGCGCCATTTCTTTTCAGTGACACAAGAAAAC...CTCTCCATGGTACCTACTTCCTCTCCTGACTCCATCCTTGATCACACCCCCGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS-3UTR TCA 90 bp | GTCAGGAGAGGAAGTAGGTACCATGGAGAGCCTCAGAAATGTATTGCATTCGAGAGATCTGGAACACAGTaGGACCAACACCAGGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: VRRGSRYHGEPQKCIAFERSGTQ*DQHQAL Trigger: CAGGGCCTGGTGTTGGTCTCACTGTGTTCCAGATCT...CTCGAATGCAATACATTTCTGAGGCTCTCCATGGTACCTACTTCCTCTCCTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS-3UTR TCA 90 bp | CAAAGGGTCCAGCCACACCGCTGGACCAGAAACACATCTCTGAGGCTCCAAGCCAGTGGAACACATCCTTaGTTTTCTCCACCATCTTTA | + |
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Preference number: 4 (lower is better) Translates to: QRVQPHRWTRNTSLRLQASGTHP*FSPPSL Trigger: TAAAGATGGTGGAGAAAATCAAGGATGTGTTCCACT...GGCTTGGAGCCTCAGAGATGTGTTTCTGGTCCAGCGGTGTGGCTGGACCCTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS-3UTR CCA 90 bp | CTCCCAAAGCAGCTACAGATCAGGGACTGCATTAGAAACGCTGGGAGTCGGGGGGACAGAAGTGGTATGTaGGCAACTTTTCTATGCAGT | + |
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Preference number: 4 (lower is better) Translates to: LPKQLQIRDCIRNAGSRGDRSGM*ATFLCS Trigger: ACTGCATAGAAAAGTTGCCCACATACCACTTCTGTC...CCCCCGACTCCCAGCGTTTCTAATGCAGTCCCTGATCTGTAGCTGCTTTGGGAG 51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS-3UTR CCA 90 bp | GTGATCAAGGATGGAGTCAGGAGAGGAAGTAGGTACCATGGAGAGCCTCAGAAACCACTTCAGCTTTGCTaGACAGTGTGTAGGGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: VIKDGVRRGSRYHGEPQKPLQLC*TVCRVW Trigger: CCAGACCCTACACACTGTCCAGCAAAGCTGAAGTGG...TTTCTGAGGCTCTCCATGGTACCTACTTCCTCTCCTGACTCCATCCTTGATCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| 3UTR CAA 72 bp | GAGGAAGTAGGTACCATGGAGAGCCTCAGAAATGTATaGCATTCGAGGGTCACAGGAACTCCCTGGAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: EEVGTMESLRNV*HSRVTGTPWSR Trigger: TCTGCTCCAGGGAGTTCCTGTGACCCTCGAATGCAATACATTTCTGAGGCTCTCCATGGTACCTACTTCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS-3UTR TCA 90 bp | GTCGGGGGTGTGATCAAGGATGGAGTCAGGAGAGGAAGTAGGTACCATGGAGAGGAGGTCACATCTCTCTaGTATAAATTGGAGCGTAAG | + |
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Preference number: 4 (lower is better) Translates to: VGGVIKDGVRRGSRYHGEEVTSL*YKLERK Trigger: CTTACGCTCCAATTTATATCAGAGAGATGTGACCTC...CTCTCCATGGTACCTACTTCCTCTCCTGACTCCATCCTTGATCACACCCCCGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS-3UTR TCA 90 bp | GAGGAAGTAGGTACCATGGAGAGCCTCAGAAATGTATTGCATTCGAGGGTCACAGCTGGTGTCATCAGGTaGGCACTGTCATTGATGGTG | + |
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Preference number: 4 (lower is better) Translates to: EEVGTMESLRNVLHSRVTAGVIR*ALSLMV Trigger: CACCATCAATGACAGTGCTCACCTGATGACACCAGC...TGTGACCCTCGAATGCAATACATTTCTGAGGCTCTCCATGGTACCTACTTCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS-3UTR TCA 90 bp | CACCCAATCCAAGTATTTGGTCTAAAGGATATCCTACCATCACTCCCAAAGCAGGGAACTCTTCCCTCATaGAGGTCCTGCGGGTCACAG | + |
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Preference number: 4 (lower is better) Translates to: HPIQVFGLKDILPSLPKQGTLPS*RSCGSQ Trigger: CTGTGACCCGCAGGACCTTCATGAGGGAAGAGTTCC...CTGCTTTGGGAGTGATGGTAGGATATCCTTTAGACCAAATACTTGGATTGGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS-3UTR GCA 90 bp | CACTCCCAAAGCAGCTACAGATCAGGGACTGCATTAGAAACGCTGGGAGTCGGGTCGAAAATATCACAATaGCGTGAGAACAAGGGTGTG | + |
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Preference number: 4 (lower is better) Translates to: HSQSSYRSGTALETLGVGSKISQ*RENKGV Trigger: CACACCCTTGTTCTCACGGCATTGTGATATTTTCGA...CCCGACTCCCAGCGTTTCTAATGCAGTCCCTGATCTGTAGCTGCTTTGGGAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS-3UTR GCA 90 bp | CACTCCCAAAGCAGCTACAGATCAGGGACTGCATTAGAAACGCTGGGAGTCGGGAGTCACCATGTCTACTaGAGAAGTTCTCAGTCTCAT | + |
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Preference number: 4 (lower is better) Translates to: HSQSSYRSGTALETLGVGSHHVY*RSSQSH Trigger: ATGAGACTGAGAACTTCTGCAGTAGACATGGTGACT...CCCGACTCCCAGCGTTTCTAATGCAGTCCCTGATCTGTAGCTGCTTTGGGAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS-3UTR GCA 90 bp | TGGTGTGATAATATTCTGTTGCCCTCCAACAATGTCTTAGGAGCATCACACCACAGCCCCAGCACGCATTaGTTCCTCATAGGGAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: WCDNILLPSNNVLGASHHSPSTH*FLIGSL Trigger: GAGGCTCCCTATGAGGAAGCAATGCGTGCTGGGGCT...GTGGTGTGATGCTCCTAAGACATTGTTGGAGGGCAACAGAATATTATCACACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS-3UTR CCA 90 bp | CTGGGAGTCGGGGGTGTGATCAAGGATGGAGTCAGGAGAGGAAGTAGGTACCATTTTTGTGAGATACGCTaGTCTTCTTGGTGCAGACAA | + |
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Preference number: 4 (lower is better) Translates to: LGVGGVIKDGVRRGSRYHFCEIR*SSWCRQ Trigger: TTGTCTGCACCAAGAAGACCAGCGTATCTCACAAAA...ATGGTACCTACTTCCTCTCCTGACTCCATCCTTGATCACACCCCCGACTCCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS-3UTR CCA 90 bp | CTGGGAGTCGGGGGTGTGATCAAGGATGGAGTCAGGAGAGGAAGTAGGTACCATATTTCCACAGCACAGTaGATCTCACTGGTGATCATT | + |
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Preference number: 4 (lower is better) Translates to: LGVGGVIKDGVRRGSRYHISTAQ*ISLVII Trigger: AATGATCACCAGTGAGATCCACTGTGCTGTGGAAAT...ATGGTACCTACTTCCTCTCCTGACTCCATCCTTGATCACACCCCCGACTCCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS-3UTR CCA 90 bp | AAAGGAGCTACCACTCATTTGGAAGGAGAGTGTTCTTGTTTGGCTTCCTGTATTTCCTCAGTGGAAGGCTaGACGCATCTGGGCTCCATG | + |
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Preference number: 4 (lower is better) Translates to: KGATTHLEGECSCLASCISSVEG*THLGSM Trigger: CATGGAGCCCAGATGCGTCCAGCCTTCCACTGAGGA...AATACAGGAAGCCAAACAAGAACACTCTCCTTCCAAATGAGTGGTAGCTCCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS-3UTR TCA 90 bp | GTGATCAAGGATGGAGTCAGGAGAGGAAGTAGGTACCATGGAGAGCCTCAGAAACAGAAGGGCTCTACTTaGACAACACAGACAAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: VIKDGVRRGSRYHGEPQKQKGST*TTQTKP Trigger: TGGTTTTGTCTGTGTTGTTCAAGTAGAGCCCTTCTG...TTTCTGAGGCTCTCCATGGTACCTACTTCCTCTCCTGACTCCATCCTTGATCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
||
| CDS-3UTR GCA 90 bp | CATATTAAAAAGGAGCTACCACTCATTTGGAAGGAGAGTGTTCTTGTTTGGCTTGAAGTTTCCAGATCCTaGCCCAGCCCGTGGCATCGG | + |
|
Preference number: 4 (lower is better) Translates to: HIKKELPLIWKESVLVWLEVSRS*PSPWHR Trigger: CCGATGCCACGGGCTGGGGCAGGATCTGGAAACTTC...AAGCCAAACAAGAACACTCTCCTTCCAAATGAGTGGTAGCTCCTTTTTAATATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
||
| CDS-3UTR GCA 90 bp | TGTGATAATATTCTGTTGCCCTCCAACAATGTCTTAGGAGCATCACACCACAAGCAGAGGGCTGCCAACTaGTACCAGGAGTGCATCACA | + |
|
Preference number: 4 (lower is better) Translates to: CDNILLPSNNVLGASHHKQRAAN*YQECIT Trigger: TGTGATGCACTCCTGGTAGCAGTTGGCAGCCCTCTG...CTTGTGGTGTGATGCTCCTAAGACATTGTTGGAGGGCAACAGAATATTATCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
||
| CDS-3UTR GCA 90 bp | GGAGGCAGAGAATCAGTCATACTTATCTTGTCACTGGTAAAAAGTAGTGGACTGAGAGTACCAGAGGGCTaGCAACTGCTACCAGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GGRESVILILSLVKSSGLRVPEG*QLLPGV Trigger: CACTCCTGGTAGCAGTTGGCAGCCCTCTGGTACTCT...CAGTCCACTACTTTTTACCAGTGACAAGATAAGTATGACTGATTCTCTGCCTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
||
| CDS-3UTR CCA 90 bp | TGTGATAATATTCTGTTGCCCTCCAACAATGTCTTAGGAGCATCACACCACAAGGCTGCAAATCCTCAGTaGAAGGCTGGACGCATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CDNILLPSNNVLGASHHKAANPQ*KAGRIW Trigger: CCAGATGCGTCCAGCCTTCCACTGAGGATTTGCAGC...CTTGTGGTGTGATGCTCCTAAGACATTGTTGGAGGGCAACAGAATATTATCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
||
| CDS-3UTR CCA 90 bp | GAGGAAGTAGGTACCATGGAGAGCCTCAGAAATGTATTGCATTCGAGGGTCACACTAGGGGTACCTCTTTaGGCTCTAGACTCTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: EEVGTMESLRNVLHSRVTLGVPL*ALDSFS Trigger: AGAGAAAGAGTCTAGAGCCCAAAGAGGTACCCCTAG...TGTGACCCTCGAATGCAATACATTTCTGAGGCTCTCCATGGTACCTACTTCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
||
| CDS-3UTR CCA 90 bp | TGTGATAATATTCTGTTGCCCTCCAACAATGTCTTAGGAGCATCACACCACAAGAGTTCCCGGCTTTCCTaGAGGTTCCTGGAGAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: CDNILLPSNNVLGASHHKSSRLS*RFLESV Trigger: CACACTCTCCAGGAACCTCCAGGAAAGCCGGGAACT...CTTGTGGTGTGATGCTCCTAAGACATTGTTGGAGGGCAACAGAATATTATCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
||
| CDS-3UTR CCA 90 bp | GAGGAAGTAGGTACCATGGAGAGCCTCAGAAATGTATTGCATTCGAGGGTCACATCTCCACCATCTTTATaGCAAGAGCTGTCTTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EEVGTMESLRNVLHSRVTSPPSL*QELSSW Trigger: CCAGGAAGACAGCTCTTGCCATAAAGATGGTGGAGA...TGTGACCCTCGAATGCAATACATTTCTGAGGCTCTCCATGGTACCTACTTCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
||
| CDS-3UTR CCA 90 bp | GAGGAAGTAGGTACCATGGAGAGCCTCAGAAATGTATTGCATTCGAGGGTCACATCTGCGTGCCGAACTTaGAAAGGATCCAGAAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: EEVGTMESLRNVLHSRVTSACRT*KGSRKS Trigger: GCTTTTTCTGGATCCTTTCCAAGTTCGGCACGCAGA...TGTGACCCTCGAATGCAATACATTTCTGAGGCTCTCCATGGTACCTACTTCCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
||
| CDS-3UTR TCA 90 bp | GGAGGCAGAGAATCAGTCATACTTATCTTGTCACTGGTAAAAAGTAGTGGACTGGGTGAGCACTGTCATTaGTGGTGGGAAAGCCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GGRESVILILSLVKSSGLGEHCH*WWESLK Trigger: CTTCAGGCTTTCCCACCATCAATGACAGTGCTCACC...CAGTCCACTACTTTTTACCAGTGACAAGATAAGTATGACTGATTCTCTGCCTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
||
| CDS-3UTR CCA 90 bp | CACTCCCAAAGCAGCTACAGATCAGGGACTGCATTAGAAACGCTGGGAGTCGGGTTTTCAAACAACTGTTaGTCATCTTCTTCCTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HSQSSYRSGTALETLGVGFSNNC*SSSSCS Trigger: AGAACAGGAAGAAGATGACCAACAGTTGTTTGAAAA...CCCGACTCCCAGCGTTTCTAATGCAGTCCCTGATCTGTAGCTGCTTTGGGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
||
| CDS-3UTR CCA 90 bp | CACTCCCAAAGCAGCTACAGATCAGGGACTGCATTAGAAACGCTGGGAGTCGGGTATGTGTTTAATCTTTaGGAACTCTTCCCTCATGAA | + |
|
Preference number: 4 (lower is better) Translates to: HSQSSYRSGTALETLGVGYVFNL*ELFPHE Trigger: TTCATGAGGGAAGAGTTCCCAAAGATTAAACACATA...CCCGACTCCCAGCGTTTCTAATGCAGTCCCTGATCTGTAGCTGCTTTGGGAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
||
| CDS-3UTR CCA 90 bp | GTGATCAAGGATGGAGTCAGGAGAGGAAGTAGGTACCATGGAGAGCCTCAGAAAGTTGGCTATTTGTTCTaGTGTCAGGTTAGCCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: VIKDGVRRGSRYHGEPQKVGYLF*CQVSLD Trigger: ATCAAGGCTAACCTGACACCAGAACAAATAGCCAAC...TTTCTGAGGCTCTCCATGGTACCTACTTCCTCTCCTGACTCCATCCTTGATCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
||
| CDS-3UTR TCA 90 bp | TGGTGTGATAATATTCTGTTGCCCTCCAACAATGTCTTAGGAGCATCACACCACGCACAAGTTGATGGCTaGGGTCACATCTCTCTGATA | + |
|
Preference number: 4 (lower is better) Translates to: WCDNILLPSNNVLGASHHAQVDG*GHISLI Trigger: TATCAGAGAGATGTGACCTCAGCCATCAACTTGTGC...GTGGTGTGATGCTCCTAAGACATTGTTGGAGGGCAACAGAATATTATCACACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
||
| CDS-3UTR TCA 90 bp | ATTTGGTCTAAAGGATATCCTACCATCACTCCCAAAGCAGCTACAGATCAGGGAGCAAAGCAGAGTTTATaGACGCCTTCTGAGTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: IWSKGYPTITPKAATDQGAKQSL*TPSECT Trigger: TGTGCACTCAGAAGGCGTTCATAAACTCTGCTTTGC...TCCCTGATCTGTAGCTGCTTTGGGAGTGATGGTAGGATATCCTTTAGACCAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
||
| CDS-3UTR GCA 90 bp | AAAGGAGCTACCACTCATTTGGAAGGAGAGTGTTCTTGTTTGGCTTCCTGTATTATTTGCAGCCCCGTTTaGTTTTGGATGGGTGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KGATTHLEGECSCLASCIICSPV*FWMGGA Trigger: AGCACCACCCATCCAAAAGCAAACGGGGCTGCAAAT...AATACAGGAAGCCAAACAAGAACACTCTCCTTCCAAATGAGTGGTAGCTCCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
||
| CDS-3UTR CCA 90 bp | CACCCAATCCAAGTATTTGGTCTAAAGGATATCCTACCATCACTCCCAAAGCAGCACTCAGCACAGATCTaGAACACAGTGAGACCAACA | + |
|
Preference number: 4 (lower is better) Translates to: HPIQVFGLKDILPSLPKQHSAQI*NTVRPT Trigger: TGTTGGTCTCACTGTGTTCCAGATCTGTGCTGAGTG...CTGCTTTGGGAGTGATGGTAGGATATCCTTTAGACCAAATACTTGGATTGGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
||
| CDS-3UTR TCA 90 bp | AAAGGAGCTACCACTCATTTGGAAGGAGAGTGTTCTTGTTTGGCTTCCTGTATTTTGAGGATGTGGTCTTaGGAATGTAGCCTAGGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: KGATTHLEGECSCLASCILRMWS*ECSLGV Trigger: TACCCCTAGGCTACATTCTCAAGACCACATCCTCAA...AATACAGGAAGCCAAACAAGAACACTCTCCTTCCAAATGAGTGGTAGCTCCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
||
| CDS-3UTR TCA 90 bp | TGGTGTGATAATATTCTGTTGCCCTCCAACAATGTCTTAGGAGCATCACACCACCAATATTGTTCTCCATaGTCCAGGAATCTGGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: WCDNILLPSNNVLGASHHQYCSP*SRNLGP Trigger: AGGACCCAGATTCCTGGATCATGGAGAACAATATTG...GTGGTGTGATGCTCCTAAGACATTGTTGGAGGGCAACAGAATATTATCACACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
||
| CDS-3UTR TCA 90 bp | GGAGGCAGAGAATCAGTCATACTTATCTTGTCACTGGTAAAAAGTAGTGGACTGATTTTCCGAGGAAACTaGGCAGAAGGAACTGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GGRESVILILSLVKSSGLIFRGN*AEGTGR Trigger: CCTTCCAGTTCCTTCTGCTCAGTTTCCTCGGAAAAT...CAGTCCACTACTTTTTACCAGTGACAAGATAAGTATGACTGATTCTCTGCCTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
||
| CDS-3UTR CCA 90 bp | AAAGGAGCTACCACTCATTTGGAAGGAGAGTGTTCTTGTTTGGCTTCCTGTATTATACGCTGGTCTTCTTaGTGCAGACAAAGCTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KGATTHLEGECSCLASCIIRWSS*CRQSWC Trigger: ACACCAGCTTTGTCTGCACCAAGAAGACCAGCGTAT...AATACAGGAAGCCAAACAAGAACACTCTCCTTCCAAATGAGTGGTAGCTCCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
||
| CDS-3UTR CCA 90 bp | CATATTAAAAAGGAGCTACCACTCATTTGGAAGGAGAGTGTTCTTGTTTGGCTTCTGAGCAGAAGGAACTaGAAGGCCACTACCATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HIKKELPLIWKESVLVWLLSRRN*KATTIC Trigger: GCAGATGGTAGTGGCCTTCCAGTTCCTTCTGCTCAG...AAGCCAAACAAGAACACTCTCCTTCCAAATGAGTGGTAGCTCCTTTTTAATATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
||
| CDS-3UTR TCA 90 bp | AAAGGAGCTACCACTCATTTGGAAGGAGAGTGTTCTTGTTTGGCTTCCTGTATTTCTTCCAGTCCTTCGTaGTCTGAGAACAGCTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: KGATTHLEGECSCLASCISSSPS*SENSFL Trigger: TAAGAAGCTGTTCTCAGATCACGAAGGACTGGAAGA...AATACAGGAAGCCAAACAAGAACACTCTCCTTCCAAATGAGTGGTAGCTCCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
||
| CDS-3UTR TCA 90 bp | TGGTGTGATAATATTCTGTTGCCCTCCAACAATGTCTTAGGAGCATCACACCACATATCACCCTTGGAATaGCACATATTTTCCCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: WCDNILLPSNNVLGASHHISPLE*HIFSLG Trigger: ACCCAGGGAAAATATGTGTCATTCCAAGGGTGATAT...GTGGTGTGATGCTCCTAAGACATTGTTGGAGGGCAACAGAATATTATCACACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
||
| CDS-3UTR TCA 90 bp | AAAGGAGCTACCACTCATTTGGAAGGAGAGTGTTCTTGTTTGGCTTCCTGTATTATTCCTTACCATGCCTaGGAACTGTTCTACACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KGATTHLEGECSCLASCIIPYHA*ELFYTV Trigger: GACAGTGTAGAACAGTTCTCAGGCATGGTAAGGAAT...AATACAGGAAGCCAAACAAGAACACTCTCCTTCCAAATGAGTGGTAGCTCCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
||
| CDS-3UTR GCA 90 bp | ATATTAAAAAGGAGCTACCACTCATTTGGAAGGAGAGTGTTCTTGTTTGGCTTCCGGCAGGTGACTTGCTaGATCACAAAATCCCTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: ILKRSYHSFGRRVFLFGFRQVTC*ITKSLR Trigger: CCTAAGGGATTTTGTGATGCAGCAAGTCACCTGCCG...GAAGCCAAACAAGAACACTCTCCTTCCAAATGAGTGGTAGCTCCTTTTTAATAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
||
| CDS-3UTR TCA 90 bp | ATATTAAAAAGGAGCTACCACTCATTTGGAAGGAGAGTGTTCTTGTTTGGCTTCCGCATCTGGGCTCCATaGCTTTACAAAAATCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ILKRSYHSFGRRVFLFGFRIWAP*LYKNQE Trigger: CTCCTGATTTTTGTAAAGTCATGGAGCCCAGATGCG...GAAGCCAAACAAGAACACTCTCCTTCCAAATGAGTGGTAGCTCCTTTTTAATAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
||
| CDS-3UTR CCA 90 bp | CATATTAAAAAGGAGCTACCACTCATTTGGAAGGAGAGTGTTCTTGTTTGGCTTTCCTGGAGAGTGTGTTaGCTTGCTCTTCTAAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: HIKKELPLIWKESVLVWLSWRVC*LALLST Trigger: AGTGCTTAGAAGAGCAAGCCAACACACTCTCCAGGA...AAGCCAAACAAGAACACTCTCCTTCCAAATGAGTGGTAGCTCCTTTTTAATATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
||
| CDS-3UTR GCA 90 bp | ATTTGGTCTAAAGGATATCCTACCATCACTCCCAAAGCAGCTACAGATCAGGGAATCCAAACACTTCTTTaGTCTTATCATCAACCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: IWSKGYPTITPKAATDQGIQTLL*SYHQPQ Trigger: TTGGGGTTGATGATAAGAGCAAAGAAGTGTTTGGAT...TCCCTGATCTGTAGCTGCTTTGGGAGTGATGGTAGGATATCCTTTAGACCAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
||
| CDS-3UTR CCA 90 bp | GGAGGCAGAGAATCAGTCATACTTATCTTGTCACTGGTAAAAAGTAGTGGACTGCTCTCTGATATAAATTaGAGCGTAAGCTGCAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: GGRESVILILSLVKSSGLLSDIN*SVSCKS Trigger: GGATTTGCAGCTTACGCTCCAATTTATATCAGAGAG...CAGTCCACTACTTTTTACCAGTGACAAGATAAGTATGACTGATTCTCTGCCTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
||
| CDS-3UTR CCA 90 bp | ATATTAAAAAGGAGCTACCACTCATTTGGAAGGAGAGTGTTCTTGTTTGGCTTCGTCACTGAAAAGAAATaGCGCTGCAGAGTTTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: ILKRSYHSFGRRVFLFGFVTEKK*RCRVSL Trigger: TAAGGAAACTCTGCAGCGCCATTTCTTTTCAGTGAC...GAAGCCAAACAAGAACACTCTCCTTCCAAATGAGTGGTAGCTCCTTTTTAATAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
||
| CDS-3UTR GCA 90 bp | CATATTAAAAAGGAGCTACCACTCATTTGGAAGGAGAGTGTTCTTGTTTGGCTTCAATATTCCTTACCATaGCTGAGAACTGTTCTACAC | + |
|
Preference number: 4 (lower is better) Translates to: HIKKELPLIWKESVLVWLQYSLP*LRTVLH Trigger: GTGTAGAACAGTTCTCAGGCATGGTAAGGAATATTG...AAGCCAAACAAGAACACTCTCCTTCCAAATGAGTGGTAGCTCCTTTTTAATATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
||
| 3UTR CAA 72 bp | TTTTTCTATTTCTTAAGCTGGTGTGATAATATTCTGTaGCCCTCCAACAATGTCTTAGGAGCATCACACCAC | + |
|
Preference number: 4 (lower is better) Translates to: FFYFLSWCDNIL*PSNNVLGASHH Trigger: GTGGTGTGATGCTCCTAAGACATTGTTGGAGGGCAACAGAATATTATCACACCAGCTTAAGAAATAGAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
||
| CDS-3UTR CAA 90 bp | GCAAAGGGTCCAGCCACACCGCTGGACCAGAAACACATCTCTGAGGCTCCAAGCGGTGTCAGGTTAGCCTaGATCTCACACACGCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: AKGPATPLDQKHISEAPSGVRLA*ISHTPG Trigger: GCCTGGCGTGTGTGAGATCAAGGCTAACCTGACACC...GCTTGGAGCCTCAGAGATGTGTTTCTGGTCCAGCGGTGTGGCTGGACCCTTTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
||
| CDS GCA 90 bp | AAGCCAGAGGATCCCGTGGTGAGGGTGTTCATTTGCAGCCCCGTTTaGTTTTGGATGGGTGGTGCTCTTAGCCTTCACGTACCAGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: KPEDPVVRVFICSPV*FWMGGALSLHVPVT Trigger: GGTGACTGGTACGTGAAGGCTAAGAGCACCACCCATCCAAAAGCAAACGGGGCTGCAAATGAACACCCTCACCACGGGATCCTCTGGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
||
| CDS-3UTR CAA 90 bp | CAAAGGGTCCAGCCACACCGCTGGACCAGAAACACATCTCTGAGGCTCCAAGCCCAGAATTGCTATGTCTaGGGGCAGATAGCCCTCATG | + |
|
Preference number: 5 (lower is better) Translates to: QRVQPHRWTRNTSLRLQAQNCYV*GQIALM Trigger: CATGAGGGCTATCTGCCCCAAGACATAGCAATTCTG...GGCTTGGAGCCTCAGAGATGTGTTTCTGGTCCAGCGGTGTGGCTGGACCCTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
||
| CDS GCA 90 bp | GTGAGACCAACACCAGGCCCTGTAGCAAATCCTCCACTTCAGCTTTaGTGGACAGTGTGTAGGGTCTGGGGTAGTACACAGGGGGTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: VRPTPGPVANPPLQL*WTVCRVWGSTQGVD Trigger: ATCAACCCCCTGTGTACTACCCCAGACCCTACACACTGTCCAGCAAAGCTGAAGTGGAGGATTTGCTACAGGGCCTGGTGTTGGTCTCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
||
| CDS CCA 90 bp | AGACCAACACCAGGCCCTGTAGCAAATCCTCCACTTCAGCTTTGCTaGACAGTGTGTAGGGTCTGGGGTAGTACACAGGGGGTTGATCAG | + |
|
Preference number: 5 (lower is better) Translates to: RPTPGPVANPPLQLC*TVCRVWGSTQGVDQ Trigger: CTGATCAACCCCCTGTGTACTACCCCAGACCCTACACACTGTCCAGCAAAGCTGAAGTGGAGGATTTGCTACAGGGCCTGGTGTTGGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
||
| CDS CCA 90 bp | GAGGATCCCGTGGTGAGGGTGTTCATTTGCAGCCCCGTTTGCTTTTaGATGGGTGGTGCTCTTAGCCTTCACGTACCAGTCACCATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: EDPVVRVFICSPVCF*MGGALSLHVPVTMS Trigger: AGACATGGTGACTGGTACGTGAAGGCTAAGAGCACCACCCATCCAAAAGCAAACGGGGCTGCAAATGAACACCCTCACCACGGGATCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
||
| CDS CCA 90 bp | CATTGCTTCCTCATAGGGAGCCTCCTGGAACGTTGCCAGGGTGTCTaGAAGGCCCATGGAGGGAGGGTTTTCTTGCATCCTCTTCATTTC | + |
|
Preference number: 5 (lower is better) Translates to: HCFLIGSLLERCQGV*KAHGGRVFLHPLHF Trigger: GAAATGAAGAGGATGCAAGAAAACCCTCCCTCCATGGGCCTTCCAGACACCCTGGCAACGTTCCAGGAGGCTCCCTATGAGGAAGCAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
||
| CDS-3UTR CAA 90 bp | GTCCAGCCACACCGCTGGACCAGAAACACATCTCTGAGGCTCCAAGCCATAATGTGGGGTCTGTTAGGATaGTATAGAGTACCAGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: VQPHRWTRNTSLRLQAIMWGLLG*YRVPEG Trigger: GCCCTCTGGTACTCTATACAATCCTAACAGACCCCA...CATTATGGCTTGGAGCCTCAGAGATGTGTTTCTGGTCCAGCGGTGTGGCTGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
||
| CDS-3UTR CAA 90 bp | AGGGTCCAGCCACACCGCTGGACCAGAAACACATCTCTGAGGCTCCAAGCCATAGTCTCCTGTACAGAATaGCTATGTCTTGGGGCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: RVQPHRWTRNTSLRLQAIVSCTE*LCLGAD Trigger: ATCTGCCCCAAGACATAGCAATTCTGTACAGGAGAC...TATGGCTTGGAGCCTCAGAGATGTGTTTCTGGTCCAGCGGTGTGGCTGGACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
||
| CDS TCA 90 bp | AATCAGGAGGTCGTGGTTCTGTTGCATGTAGTCCAGGTGCTTCTGTaGCCCCGATGGGAGGAGCTTCTGAAAGGAAGTTTCCAGATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: NQEVVVLLHVVQVLL*PRWEELLKGSFQIL Trigger: CAGGATCTGGAAACTTCCTTTCAGAAGCTCCTCCCATCGGGGTCACAGAAGCACCTGGACTACATGCAACAGAACCACGACCTCCTGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
||
| CDS TCA 90 bp | TCTTTATGGCAAGAGCTGTCTTCCTGGTTCCAGGAAGGCAATGGATaGACAGTTCCCGGCTTTCCTGGAGGTTCCTGGAGAGTGTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SLWQELSSWFQEGNG*TVPGFPGGSWRVCW Trigger: CCAACACACTCTCCAGGAACCTCCAGGAAAGCCGGGAACTGTTCATCCATTGCCTTCCTGGAACCAGGAAGACAGCTCTTGCCATAAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
||
| CDS TCA 90 bp | TCCACAGCACAGTGGATCTCACTGGTGATCATTTTCCGAGGAAACTaGGCAGAAGGAACTGGAAGGCCACTACCATCTGCGTGCCGAACT | + |
|
Preference number: 5 (lower is better) Translates to: STAQWISLVIIFRGN*AEGTGRPLPSACRT Trigger: AGTTCGGCACGCAGATGGTAGTGGCCTTCCAGTTCCTTCTGCTCAGTTTCCTCGGAAAATGATCACCAGTGAGATCCACTGTGCTGTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
||
| CDS GCA 90 bp | AACAGTTCCCGGCTTTCCTGGAGGTTCCTGGAGAGTGTGTTGGCTTaGTCTTCTAAGCACTGCTTGAAGAACTCACAGCCTAGCTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: NSSRLSWRFLESVLA*SSKHCLKNSQPSWS Trigger: TGACCAGCTAGGCTGTGAGTTCTTCAAGCAGTGCTTAGAAGAGCAAGCCAACACACTCTCCAGGAACCTCCAGGAAAGCCGGGAACTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS GCA 90 bp | TTTCCGAGGAAACTGAGCAGAAGGAACTGGAAGGCCACTACCATCTaGGTGCCGAACTTGGAAAGGATCCAGAAAAAGCCAGAGGATCCC | + |
|
Preference number: 5 (lower is better) Translates to: FPRKLSRRNWKATTI*VPNLERIQKKPEDP Trigger: GGGATCCTCTGGCTTTTTCTGGATCCTTTCCAAGTTCGGCACGCAGATGGTAGTGGCCTTCCAGTTCCTTCTGCTCAGTTTCCTCGGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS-3UTR CAA 90 bp | GTGATCAAGGATGGAGTCAGGAGAGGAAGTAGGTACCATGGAGAGCCTCAGAAACCGTTGGCGCACAAGTaGATGGCTGAGGTCACATCT | + |
|
Preference number: 5 (lower is better) Translates to: VIKDGVRRGSRYHGEPQKPLAHK*MAEVTS Trigger: AGATGTGACCTCAGCCATCAACTTGTGCGCCAACGG...TTTCTGAGGCTCTCCATGGTACCTACTTCCTCTCCTGACTCCATCCTTGATCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS-3UTR CAA 90 bp | GCAAAGGGTCCAGCCACACCGCTGGACCAGAAACACATCTCTGAGGCTCCAAGCCATCCAAACACTTCTTaGCTCTTATCATCAACCCCA | + |
|
Preference number: 5 (lower is better) Translates to: AKGPATPLDQKHISEAPSHPNTS*LLSSTP Trigger: TGGGGTTGATGATAAGAGCAAAGAAGTGTTTGGATG...GCTTGGAGCCTCAGAGATGTGTTTCTGGTCCAGCGGTGTGGCTGGACCCTTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS-3UTR CAA 90 bp | CACTCCCAAAGCAGCTACAGATCAGGGACTGCATTAGAAACGCTGGGAGTCGGGGGAGGGAGGGTTTTCTaGCATCCTCTTCATTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: HSQSSYRSGTALETLGVGGGRVF*HPLHFI Trigger: GATGAAATGAAGAGGATGCAAGAAAACCCTCCCTCC...CCCGACTCCCAGCGTTTCTAATGCAGTCCCTGATCTGTAGCTGCTTTGGGAGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS-3UTR CAA 90 bp | GTCAGGAGAGGAAGTAGGTACCATGGAGAGCCTCAGAAATGTATTGCATTCGAGAAGCCCCAGCACGCATaGCTTCCTCATAGGGAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: VRRGSRYHGEPQKCIAFEKPQHA*LPHREP Trigger: AGGCTCCCTATGAGGAAGCAATGCGTGCTGGGGCTT...CTCGAATGCAATACATTTCTGAGGCTCTCCATGGTACCTACTTCCTCTCCTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS TCA 90 bp | AGGGCACCGTTGGCGCACAAGTTGATGGCTGAGGTCACATCTCTCTaGTATAAATTGGAGCGTAAGCTGCAAATCCTCAGTGGAAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RAPLAHKLMAEVTSL*YKLERKLQILSGRL Trigger: CAGCCTTCCACTGAGGATTTGCAGCTTACGCTCCAATTTATATCAGAGAGATGTGACCTCAGCCATCAACTTGTGCGCCAACGGTGCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS GCA 90 bp | CAGTCGAACTGGGGTCTGTTAGGATTGTATAGAGTACCAGAGGGCTaGCAACTGCTACCAGGAGTGCATCACATAGGACCTTCTCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: QSNWGLLGLYRVPEG*QLLPGVHHIGPSLL Trigger: GAGAAGAGAAGGTCCTATGTGATGCACTCCTGGTAGCAGTTGGCAGCCCTCTGGTACTCTATACAATCCTAACAGACCCCAGTTCGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS GCA 90 bp | TCCCTCATGAAGGTCCTGCGGGTCACAGCTCGGCAGGTGACTTGCTaGATCACAAAATCCCTTAGGGAGTCATTTTCACAAACAAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLMKVLRVTARQVTC*ITKSLRESFSQTKR Trigger: CCTCTTTGTTTGTGAAAATGACTCCCTAAGGGATTTTGTGATGCAGCAAGTCACCTGCCGAGCTGTGACCCGCAGGACCTTCATGAGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS CCA 90 bp | ACTGAAGGGCGGTGTTTTGAGTATAGTCGGCTCTTCCAGTCGAACTaGGGTCTGTTAGGATTGTATAGAGTACCAGAGGGCTGCCAACTG | + |
|
Preference number: 5 (lower is better) Translates to: TEGRCFEYSRLFQSN*GLLGLYRVPEGCQL Trigger: CAGTTGGCAGCCCTCTGGTACTCTATACAATCCTAACAGACCCCAGTTCGACTGGAAGAGCCGACTATACTCAAAACACCGCCCTTCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
||
| CDS-3UTR CAA 90 bp | GTCCAGCCACACCGCTGGACCAGAAACACATCTCTGAGGCTCCAAGCCATAATGAGGATCTCTTTTGGTTaGCAGTGGAACACATCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VQPHRWTRNTSLRLQAIMRISFG*QWNTSL Trigger: CAAGGATGTGTTCCACTGCAAACCAAAAGAGATCCT...CATTATGGCTTGGAGCCTCAGAGATGTGTTTCTGGTCCAGCGGTGTGGCTGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS TCA 90 bp | AGATACGCTGGTCTTCTTGGTGCAGACAAAGCTGGTGTCATCAGGTaGGCACTGTCATTGATGGTGGGAAAGCCTGAAGAAGGATCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: RYAGLLGADKAGVIR*ALSLMVGKPEEGSD Trigger: GTCAGATCCTTCTTCAGGCTTTCCCACCATCAATGACAGTGCTCACCTGATGACACCAGCTTTGTCTGCACCAAGAAGACCAGCGTATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS GCA 90 bp | TCTTCCCTCATGAAGGTCCTGCGGGTCACAGCTCGGCAGGTGACTTaGTGCATCACAAAATCCCTTAGGGAGTCATTTTCACAAACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SSLMKVLRVTARQVT*CITKSLRESFSQTK Trigger: CTTTGTTTGTGAAAATGACTCCCTAAGGGATTTTGTGATGCAGCAAGTCACCTGCCGAGCTGTGACCCGCAGGACCTTCATGAGGGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
||
| CDS CCA 90 bp | GCGCTGCAGAGTTTCCTTATGTTCCAGGACTTTTGTGAGATACGCTaGTCTTCTTGGTGCAGACAAAGCTGGTGTCATCAGGTGAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: ALQSFLMFQDFCEIR*SSWCRQSWCHQVST Trigger: AGTGCTCACCTGATGACACCAGCTTTGTCTGCACCAAGAAGACCAGCGTATCTCACAAAAGTCCTGGAACATAAGGAAACTCTGCAGCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS-3UTR CAA 90 bp | GTCCAGCCACACCGCTGGACCAGAAACACATCTCTGAGGCTCCAAGCCATAATGCAAAGAGGATCTCTTTaGGTTTGCAGTGGAACACAT | + |
|
Preference number: 5 (lower is better) Translates to: VQPHRWTRNTSLRLQAIMQRGSL*VCSGTH Trigger: ATGTGTTCCACTGCAAACCAAAAGAGATCCTCTTTG...CATTATGGCTTGGAGCCTCAGAGATGTGTTTCTGGTCCAGCGGTGTGGCTGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS TCA 90 bp | TTCTTGGTGCAGACAAAGCTGGTGTCATCAGGTGAGCACTGTCATTaGTGGTGGGAAAGCCTGAAGAAGGATCTGACTGAATGTCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: FLVQTKLVSSGEHCH*WWESLKKDLTECPA Trigger: TGCTGGACATTCAGTCAGATCCTTCTTCAGGCTTTCCCACCATCAATGACAGTGCTCACCTGATGACACCAGCTTTGTCTGCACCAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
||
| CDS CCA 90 bp | AAACAGGCTGTGACATTTTTCTGCCACATAGTTGGCTATTTGTTCTaGTGTCAGGTTAGCCTTGATCTCACACACGCCAGGCAAAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: KQAVTFFCHIVGYLF*CQVSLDLTHARQSP Trigger: GGGGCTTTGCCTGGCGTGTGTGAGATCAAGGCTAACCTGACACCAGAACAAATAGCCAACTATGTGGCAGAAAAATGTCACAGCCTGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS TCA 90 bp | AAACCAATATCGCCAGCCCAGCTTCTCGAAAATATCACAATGCCGTaGGAACAAGGGTGTGTCTGTGCCTTCAGTAAGTCTTCCAGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: KPISPAQLLENITMP*EQGCVCAFSKSSSP Trigger: AGGACTGGAAGACTTACTGAAGGCACAGACACACCCTTGTTCTCACGGCATTGTGATATTTTCGAGAAGCTGGGCTGGCGATATTGGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS GCA 90 bp | GAATTCAGCAGTGCGCACACAGCCTGGACGAGACTCGAGTTCTCATaGCTTTTCAAACAACTGTTGGTCATCTTCTTCCTGTTCTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: EFSSAHTAWTRLEFS*LFKQLLVIFFLFSS Trigger: AGAAGAGAACAGGAAGAAGATGACCAACAGTTGTTTGAAAAGGCATGAGAACTCGAGTCTCGTCCAGGCTGTGTGCGCACTGCTGAATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS GCA 90 bp | CACATCCTTATACTGTCCTCTGTCTTCTCGTCTCCTGTACAGAATTaGTATGTCTTGGGGCAGATAGCCCTCATGAAACAGGCTGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: HILILSSVFSSPVQN*YVLGQIALMKQAVT Trigger: TGTCACAGCCTGTTTCATGAGGGCTATCTGCCCCAAGACATAGCAATTCTGTACAGGAGACGAGAAGACAGAGGACAGTATAAGGATGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS-3UTR CAA 90 bp | TGGTGTGATAATATTCTGTTGCCCTCCAACAATGTCTTAGGAGCATCACACCACGATACGCTGGTCTTCTaGGTGCAGACAAAGCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: WCDNILLPSNNVLGASHHDTLVF*VQTKLV Trigger: CACCAGCTTTGTCTGCACCAAGAAGACCAGCGTATC...GTGGTGTGATGCTCCTAAGACATTGTTGGAGGGCAACAGAATATTATCACACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS-3UTR CAA 90 bp | GGAGGCAGAGAATCAGTCATACTTATCTTGTCACTGGTAAAAAGTAGTGGACTGGTAGTACACAGGGGGTaGATCAGGTCTGGACCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GGRESVILILSLVKSSGLVVHRG*IRSGPS Trigger: AGAGGGTCCAGACCTGATCAACCCCCTGTGTACTAC...CAGTCCACTACTTTTTACCAGTGACAAGATAAGTATGACTGATTCTCTGCCTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS GCA 90 bp | CCTTGTGACAATATTGTTCTCCATGATCCAGGAATCTGGGTCCTCTaGAAACACGACACAACAGAAGGGCTCTACTTGAACAACACAGAC | + |
|
Preference number: 5 (lower is better) Translates to: PCDNIVLHDPGIWVL*KHDTTEGLYLNNTD Trigger: GTCTGTGTTGTTCAAGTAGAGCCCTTCTGTTGTGTCGTGTTTGCAGAGGACCCAGATTCCTGGATCATGGAGAACAATATTGTCACAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS GCA 90 bp | TTCCTTATGTTCCAGGACTTTTGTGAGATACGCTGGTCTTCTTGGTaGAGACAAAGCTGGTGTCATCAGGTGAGCACTGTCATTGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: FLMFQDFCEIRWSSW*RQSWCHQVSTVIDG Trigger: ACCATCAATGACAGTGCTCACCTGATGACACCAGCTTTGTCTGCACCAAGAAGACCAGCGTATCTCACAAAAGTCCTGGAACATAAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS GCA 90 bp | GTCTTGGGGCAGATAGCCCTCATGAAACAGGCTGTGACATTTTTCTaGCACATAGTTGGCTATTTGTTCTGGTGTCAGGTTAGCCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: VLGQIALMKQAVTFF*HIVGYLFWCQVSLD Trigger: ATCAAGGCTAACCTGACACCAGAACAAATAGCCAACTATGTGGCAGAAAAATGTCACAGCCTGTTTCATGAGGGCTATCTGCCCCAAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS CCA 90 bp | AACCTTCAGCCTTGTGACAATATTGTTCTCCATGATCCAGGAATCTaGGTCCTCTGCAAACACGACACAACAGAAGGGCTCTACTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: NLQPCDNIVLHDPGI*VLCKHDTTEGLYLN Trigger: GTTCAAGTAGAGCCCTTCTGTTGTGTCGTGTTTGCAGAGGACCCAGATTCCTGGATCATGGAGAACAATATTGTCACAAGGCTGAAGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS-3UTR CAA 90 bp | GTGATCAAGGATGGAGTCAGGAGAGGAAGTAGGTACCATGGAGAGCCTCAGAAAAGCCTTGTGACAATATaGTTCTCCATGATCCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: VIKDGVRRGSRYHGEPQKSLVTI*FSMIQE Trigger: TTCCTGGATCATGGAGAACAATATTGTCACAAGGCT...TTTCTGAGGCTCTCCATGGTACCTACTTCCTCTCCTGACTCCATCCTTGATCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS-3UTR CAA 90 bp | CACCCAATCCAAGTATTTGGTCTAAAGGATATCCTACCATCACTCCCAAAGCAGCATTTCCACCCACTGTaGAACCTTCAGCCTTGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: HPIQVFGLKDILPSLPKQHFHPL*NLQPCD Trigger: GTCACAAGGCTGAAGGTTCAACAGTGGGTGGAAATG...CTGCTTTGGGAGTGATGGTAGGATATCCTTTAGACCAAATACTTGGATTGGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS GCA 90 bp | TCATTAAACCAATATCGCCAGCCCAGCTTCTCGAAAATATCACAATaGCGTGAGAACAAGGGTGTGTCTGTGCCTTCAGTAAGTCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SLNQYRQPSFSKISQ*RENKGVSVPSVSLP Trigger: TGGAAGACTTACTGAAGGCACAGACACACCCTTGTTCTCACGGCATTGTGATATTTTCGAGAAGCTGGGCTGGCGATATTGGTTTAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS CCA 90 bp | AGTTTCCTTATGTTCCAGGACTTTTGTGAGATACGCTGGTCTTCTTaGTGCAGACAAAGCTGGTGTCATCAGGTGAGCACTGTCATTGAT | + |
|
Preference number: 5 (lower is better) Translates to: SFLMFQDFCEIRWSS*CRQSWCHQVSTVID Trigger: ATCAATGACAGTGCTCACCTGATGACACCAGCTTTGTCTGCACCAAGAAGACCAGCGTATCTCACAAAAGTCCTGGAACATAAGGAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS-3UTR CAA 90 bp | GTGATCAAGGATGGAGTCAGGAGAGGAAGTAGGTACCATGGAGAGCCTCAGAAACGAGGGACAATCTTTTaGGTGGTAAACCTTTTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: VIKDGVRRGSRYHGEPQKRGTIF*VVNLLN Trigger: GTTTAAAAGGTTTACCACCAAAAAGATTGTCCCTCG...TTTCTGAGGCTCTCCATGGTACCTACTTCCTCTCCTGACTCCATCCTTGATCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS-3UTR CAA 90 bp | GTCAGGAGAGGAAGTAGGTACCATGGAGAGCCTCAGAAATGTATTGCATTCGAGCTTTTCAAACAACTGTaGGTCATCTTCTTCCTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: VRRGSRYHGEPQKCIAFELFKQL*VIFFLF Trigger: GAACAGGAAGAAGATGACCAACAGTTGTTTGAAAAG...CTCGAATGCAATACATTTCTGAGGCTCTCCATGGTACCTACTTCCTCTCCTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS TCA 90 bp | CACAAACAAAGAGGATCTCTTTTGGTTTGCAGTGGAACACATCCTTaGTTTTCTCCACCATCTTTATGGCAAGAGCTGTCTTCCTGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: HKQRGSLLVCSGTHP*FSPPSLWQELSSWF Trigger: GAACCAGGAAGACAGCTCTTGCCATAAAGATGGTGGAGAAAATCAAGGATGTGTTCCACTGCAAACCAAAAGAGATCCTCTTTGTTTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS-3UTR CAA 90 bp | GGAGGCAGAGAATCAGTCATACTTATCTTGTCACTGGTAAAAAGTAGTGGACTGGTTGTGAAATTCACCTaGGGCTTTTCACGACAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GGRESVILILSLVKSSGLVVKFT*GFSRQK Trigger: CTTCTGTCGTGAAAAGCCCAAGGTGAATTTCACAAC...CAGTCCACTACTTTTTACCAGTGACAAGATAAGTATGACTGATTCTCTGCCTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS-3UTR CAA 90 bp | CATATTAAAAAGGAGCTACCACTCATTTGGAAGGAGAGTGTTCTTGTTTGGCTTTCTTCTAAGCACTGCTaGAAGAACTCACAGCCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: HIKKELPLIWKESVLVWLSSKHC*KNSQPS Trigger: GCTAGGCTGTGAGTTCTTCAAGCAGTGCTTAGAAGA...AAGCCAAACAAGAACACTCTCCTTCCAAATGAGTGGTAGCTCCTTTTTAATATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS-3UTR CAA 90 bp | CATATTAAAAAGGAGCTACCACTCATTTGGAAGGAGAGTGTTCTTGTTTGGCTTACAGAAGGGCTCTACTaGAACAACACAGACAAAACC | + |
|
Preference number: 5 (lower is better) Translates to: HIKKELPLIWKESVLVWLTEGLY*NNTDKT Trigger: GGTTTTGTCTGTGTTGTTCAAGTAGAGCCCTTCTGT...AAGCCAAACAAGAACACTCTCCTTCCAAATGAGTGGTAGCTCCTTTTTAATATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS CCA 72 bp | CTCATAGGGAGCCTCCTGGAACGTTGCCAGGGTGTCTaGAAGGCCCATGGAGGGAGGGTTTTCTTGCATCCT | + |
|
Preference number: 6 (lower is better) Translates to: LIGSLLERCQGV*KAHGGRVFLHP Trigger: AGGATGCAAGAAAACCCTCCCTCCATGGGCCTTCCAGACACCCTGGCAACGTTCCAGGAGGCTCCCTATGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS CCA 72 bp | AGGGTCTGGGGTAGTACACAGGGGGTTGATCAGGTCTaGACCCTCTGCTGGCCAGGTATATCACCCTTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: RVWGSTQGVDQV*TLCWPGISPLE Trigger: TTCCAAGGGTGATATACCTGGCCAGCAGAGGGTCCAGACCTGATCAACCCCCTGTGTACTACCCCAGACCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS CCA 72 bp | CCTCCACTTCAGCTTTGCTGGACAGTGTGTAGGGTCTaGGGTAGTACACAGGGGGTTGATCAGGTCTGGACC | + |
|
Preference number: 6 (lower is better) Translates to: PPLQLCWTVCRV*GSTQGVDQVWT Trigger: GGTCCAGACCTGATCAACCCCCTGTGTACTACCCCAGACCCTACACACTGTCCAGCAAAGCTGAAGTGGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS CAA 72 bp | GGACAGTGTGTAGGGTCTGGGGTAGTACACAGGGGGTaGATCAGGTCTGGACCCTCTGCTGGCCAGGTATAT | + |
|
Preference number: 6 (lower is better) Translates to: GQCVGSGVVHRG*IRSGPSAGQVY Trigger: ATATACCTGGCCAGCAGAGGGTCCAGACCTGATCAACCCCCTGTGTACTACCCCAGACCCTACACACTGTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS CAA 90 bp | CTGAGCAGAAGGAACTGGAAGGCCACTACCATCTGCGTGCCGAACTaGGAAAGGATCCAGAAAAAGCCAGAGGATCCCGTGGTGAGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LSRRNWKATTICVPN*ERIQKKPEDPVVRV Trigger: CACCCTCACCACGGGATCCTCTGGCTTTTTCTGGATCCTTTCCAAGTTCGGCACGCAGATGGTAGTGGCCTTCCAGTTCCTTCTGCTCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS CCA 72 bp | GGAACTGGAAGGCCACTACCATCTGCGTGCCGAACTTaGAAAGGATCCAGAAAAAGCCAGAGGATCCCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: GTGRPLPSACRT*KGSRKSQRIPW Trigger: CCACGGGATCCTCTGGCTTTTTCTGGATCCTTTCCAAGTTCGGCACGCAGATGGTAGTGGCCTTCCAGTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
||
| CDS TCA 72 bp | CAAGAGCTGTCTTCCTGGTTCCAGGAAGGCAATGGATaGACAGTTCCCGGCTTTCCTGGAGGTTCCTGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: QELSSWFQEGNG*TVPGFPGGSWR Trigger: TCTCCAGGAACCTCCAGGAAAGCCGGGAACTGTTCATCCATTGCCTTCCTGGAACCAGGAAGACAGCTCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
||
| CDS GCA 72 bp | ACACCAGGCCCTGTAGCAAATCCTCCACTTCAGCTTTaGTGGACAGTGTGTAGGGTCTGGGGTAGTACACAG | + |
|
Preference number: 6 (lower is better) Translates to: TPGPVANPPLQL*WTVCRVWGSTQ Trigger: CTGTGTACTACCCCAGACCCTACACACTGTCCAGCAAAGCTGAAGTGGAGGATTTGCTACAGGGCCTGGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
||
| CDS CCA 72 bp | ATGGCAAGAGCTGTCTTCCTGGTTCCAGGAAGGCAATaGATGAACAGTTCCCGGCTTTCCTGGAGGTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: MARAVFLVPGRQ*MNSSRLSWRFL Trigger: CAGGAACCTCCAGGAAAGCCGGGAACTGTTCATCCATTGCCTTCCTGGAACCAGGAAGACAGCTCTTGCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
||
| CDS CCA 72 bp | GTGGTGAGGGTGTTCATTTGCAGCCCCGTTTGCTTTTaGATGGGTGGTGCTCTTAGCCTTCACGTACCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: VVRVFICSPVCF*MGGALSLHVPV Trigger: GACTGGTACGTGAAGGCTAAGAGCACCACCCATCCAAAAGCAAACGGGGCTGCAAATGAACACCCTCACCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
||
| CDS CAA 72 bp | AGGAACTGGAAGGCCACTACCATCTGCGTGCCGAACTaGGAAAGGATCCAGAAAAAGCCAGAGGATCCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: RNWKATTICVPN*ERIQKKPEDPV Trigger: CACGGGATCCTCTGGCTTTTTCTGGATCCTTTCCAAGTTCGGCACGCAGATGGTAGTGGCCTTCCAGTTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
||
| CDS TCA 72 bp | GTCGTGGTTCTGTTGCATGTAGTCCAGGTGCTTCTGTaGCCCCGATGGGAGGAGCTTCTGAAAGGAAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: VVVLLHVVQVLL*PRWEELLKGSF Trigger: GAAACTTCCTTTCAGAAGCTCCTCCCATCGGGGTCACAGAAGCACCTGGACTACATGCAACAGAACCACGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS CAA 72 bp | AGTCGGCTCTTCCAGTCGAACTGGGGTCTGTTAGGATaGTATAGAGTACCAGAGGGCTGCCAACTGCTACCA | + |
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Preference number: 6 (lower is better) Translates to: SRLFQSNWGLLG*YRVPEGCQLLP Trigger: TGGTAGCAGTTGGCAGCCCTCTGGTACTCTATACAATCCTAACAGACCCCAGTTCGACTGGAAGAGCCGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS CAA 90 bp | TGGATGAACAGTTCCCGGCTTTCCTGGAGGTTCCTGGAGAGTGTGTaGGCTTGCTCTTCTAAGCACTGCTTGAAGAACTCACAGCCTAGC | + |
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Preference number: 6 (lower is better) Translates to: WMNSSRLSWRFLESV*ACSSKHCLKNSQPS Trigger: GCTAGGCTGTGAGTTCTTCAAGCAGTGCTTAGAAGAGCAAGCCAACACACTCTCCAGGAACCTCCAGGAAAGCCGGGAACTGTTCATCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS TCA 72 bp | TGGAGAGTGTGTTGGCTTGCTCTTCTAAGCACTGCTTaGAGAACTCACAGCCTAGCTGGTCACTCAGCACAG | + |
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Preference number: 6 (lower is better) Translates to: WRVCWLALLSTA*RTHSLAGHSAQ Trigger: CTGTGCTGAGTGACCAGCTAGGCTGTGAGTTCTTCAAGCAGTGCTTAGAAGAGCAAGCCAACACACTCTCCA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS TCA 72 bp | CAGTGGATCTCACTGGTGATCATTTTCCGAGGAAACTaGGCAGAAGGAACTGGAAGGCCACTACCATCTGCG | + |
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Preference number: 6 (lower is better) Translates to: QWISLVIIFRGN*AEGTGRPLPSA Trigger: CGCAGATGGTAGTGGCCTTCCAGTTCCTTCTGCTCAGTTTCCTCGGAAAATGATCACCAGTGAGATCCACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS GCA 72 bp | TGGGGTCTGTTAGGATTGTATAGAGTACCAGAGGGCTaGCAACTGCTACCAGGAGTGCATCACATAGGACCT | + |
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Preference number: 6 (lower is better) Translates to: WGLLGLYRVPEG*QLLPGVHHIGP Trigger: AGGTCCTATGTGATGCACTCCTGGTAGCAGTTGGCAGCCCTCTGGTACTCTATACAATCCTAACAGACCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS CCA 72 bp | TGTGAGATACGCTGGTCTTCTTGGTGCAGACAAAGCTaGTGTCATCAGGTGAGCACTGTCATTGATGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: CEIRWSSWCRQS*CHQVSTVIDGG Trigger: CCCACCATCAATGACAGTGCTCACCTGATGACACCAGCTTTGTCTGCACCAAGAAGACCAGCGTATCTCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS CAA 72 bp | CTGGAGAGTGTGTTGGCTTGCTCTTCTAAGCACTGCTaGAAGAACTCACAGCCTAGCTGGTCACTCAGCACA | + |
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Preference number: 6 (lower is better) Translates to: LESVLACSSKHC*KNSQPSWSLST Trigger: TGTGCTGAGTGACCAGCTAGGCTGTGAGTTCTTCAAGCAGTGCTTAGAAGAGCAAGCCAACACACTCTCCAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS CAA 90 bp | TTTGAGTATAGTCGGCTCTTCCAGTCGAACTGGGGTCTGTTAGGATaGTATAGAGTACCAGAGGGCTGCCAACTGCTACCAGGAGTGCAT | + |
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Preference number: 6 (lower is better) Translates to: FEYSRLFQSNWGLLG*YRVPEGCQLLPGVH Trigger: ATGCACTCCTGGTAGCAGTTGGCAGCCCTCTGGTACTCTATACAATCCTAACAGACCCCAGTTCGACTGGAAGAGCCGACTATACTCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS TCA 72 bp | GGTCTTCTTGGTGCAGACAAAGCTGGTGTCATCAGGTaGGCACTGTCATTGATGGTGGGAAAGCCTGAAGAA | + |
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Preference number: 6 (lower is better) Translates to: GLLGADKAGVIR*ALSLMVGKPEE Trigger: TTCTTCAGGCTTTCCCACCATCAATGACAGTGCTCACCTGATGACACCAGCTTTGTCTGCACCAAGAAGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS GCA 72 bp | AGGTCACATCTCTCTGATATAAATTGGAGCGTAAGCTaGAAATCCTCAGTGGAAGGCTGGACGCATCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: RSHLSDINWSVS*KSSVEGWTHLG Trigger: GCCCAGATGCGTCCAGCCTTCCACTGAGGATTTGCAGCTTACGCTCCAATTTATATCAGAGAGATGTGACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS GCA 72 bp | AAACTGAGCAGAAGGAACTGGAAGGCCACTACCATCTaGGTGCCGAACTTGGAAAGGATCCAGAAAAAGCCA | + |
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Preference number: 6 (lower is better) Translates to: KLSRRNWKATTI*VPNLERIQKKP Trigger: TGGCTTTTTCTGGATCCTTTCCAAGTTCGGCACGCAGATGGTAGTGGCCTTCCAGTTCCTTCTGCTCAGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS CCA 72 bp | CGGTGTTTTGAGTATAGTCGGCTCTTCCAGTCGAACTaGGGTCTGTTAGGATTGTATAGAGTACCAGAGGGC | + |
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Preference number: 6 (lower is better) Translates to: RCFEYSRLFQSN*GLLGLYRVPEG Trigger: GCCCTCTGGTACTCTATACAATCCTAACAGACCCCAGTTCGACTGGAAGAGCCGACTATACTCAAAACACCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS TCA 72 bp | CAGACAAAGCTGGTGTCATCAGGTGAGCACTGTCATTaGTGGTGGGAAAGCCTGAAGAAGGATCTGACTGAA | + |
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Preference number: 6 (lower is better) Translates to: QTKLVSSGEHCH*WWESLKKDLTE Trigger: TTCAGTCAGATCCTTCTTCAGGCTTTCCCACCATCAATGACAGTGCTCACCTGATGACACCAGCTTTGTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS GCA 72 bp | CAATATCGCCAGCCCAGCTTCTCGAAAATATCACAATaGCGTGAGAACAAGGGTGTGTCTGTGCCTTCAGTA | + |
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Preference number: 6 (lower is better) Translates to: QYRQPSFSKISQ*RENKGVSVPSV Trigger: TACTGAAGGCACAGACACACCCTTGTTCTCACGGCATTGTGATATTTTCGAGAAGCTGGGCTGGCGATATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS CCA 72 bp | CCTTGTGACAATATTGTTCTCCATGATCCAGGAATCTaGGTCCTCTGCAAACACGACACAACAGAAGGGCTC | + |
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Preference number: 6 (lower is better) Translates to: PCDNIVLHDPGI*VLCKHDTTEGL Trigger: GAGCCCTTCTGTTGTGTCGTGTTTGCAGAGGACCCAGATTCCTGGATCATGGAGAACAATATTGTCACAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS CCA 72 bp | ATGTTCCAGGACTTTTGTGAGATACGCTGGTCTTCTTaGTGCAGACAAAGCTGGTGTCATCAGGTGAGCACT | + |
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Preference number: 6 (lower is better) Translates to: MFQDFCEIRWSS*CRQSWCHQVST Trigger: AGTGCTCACCTGATGACACCAGCTTTGTCTGCACCAAGAAGACCAGCGTATCTCACAAAAGTCCTGGAACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS CAA 72 bp | TCTGTCTTCTCGTCTCCTGTACAGAATTGCTATGTCTaGGGGCAGATAGCCCTCATGAAACAGGCTGTGACA | + |
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Preference number: 6 (lower is better) Translates to: SVFSSPVQNCYV*GQIALMKQAVT Trigger: TGTCACAGCCTGTTTCATGAGGGCTATCTGCCCCAAGACATAGCAATTCTGTACAGGAGACGAGAAGACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS CAA 90 bp | ACACATCCTTATACTGTCCTCTGTCTTCTCGTCTCCTGTACAGAATaGCTATGTCTTGGGGCAGATAGCCCTCATGAAACAGGCTGTGAC | + |
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Preference number: 6 (lower is better) Translates to: THPYTVLCLLVSCTE*LCLGADSPHETGCD Trigger: GTCACAGCCTGTTTCATGAGGGCTATCTGCCCCAAGACATAGCAATTCTGTACAGGAGACGAGAAGACAGAGGACAGTATAAGGATGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS CAA 90 bp | CTCATGAAACAGGCTGTGACATTTTTCTGCCACATAGTTGGCTATTaGTTCTGGTGTCAGGTTAGCCTTGATCTCACACACGCCAGGCAA | + |
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Preference number: 6 (lower is better) Translates to: LMKQAVTFFCHIVGY*FWCQVSLDLTHARQ Trigger: TTGCCTGGCGTGTGTGAGATCAAGGCTAACCTGACACCAGAACAAATAGCCAACTATGTGGCAGAAAAATGTCACAGCCTGTTTCATGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS CAA 90 bp | ATACTGTCCTCTGTCTTCTCGTCTCCTGTACAGAATTGCTATGTCTaGGGGCAGATAGCCCTCATGAAACAGGCTGTGACATTTTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: ILSSVFSSPVQNCYV*GQIALMKQAVTFFC Trigger: GCAGAAAAATGTCACAGCCTGTTTCATGAGGGCTATCTGCCCCAAGACATAGCAATTCTGTACAGGAGACGAGAAGACAGAGGACAGTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS GCA 72 bp | ATACTGTCCTCTGTCTTCTCGTCTCCTGTACAGAATTaGTATGTCTTGGGGCAGATAGCCCTCATGAAACAG | + |
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Preference number: 6 (lower is better) Translates to: ILSSVFSSPVQN*YVLGQIALMKQ Trigger: CTGTTTCATGAGGGCTATCTGCCCCAAGACATAGCAATTCTGTACAGGAGACGAGAAGACAGAGGACAGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS CCA 72 bp | AATTGGAGCGTAAGCTGCAAATCCTCAGTGGAAGGCTaGACGCATCTGGGCTCCATGACTTTACAAAAATCA | + |
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Preference number: 6 (lower is better) Translates to: NWSVSCKSSVEG*THLGSMTLQKS Trigger: TGATTTTTGTAAAGTCATGGAGCCCAGATGCGTCCAGCCTTCCACTGAGGATTTGCAGCTTACGCTCCAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS TCA 72 bp | TTGGCGCACAAGTTGATGGCTGAGGTCACATCTCTCTaGTATAAATTGGAGCGTAAGCTGCAAATCCTCAGT | + |
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Preference number: 6 (lower is better) Translates to: LAHKLMAEVTSL*YKLERKLQILS Trigger: ACTGAGGATTTGCAGCTTACGCTCCAATTTATATCAGAGAGATGTGACCTCAGCCATCAACTTGTGCGCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS TCA 72 bp | AGGTGTTTAATGGCTTTTGAGGCAAAGCAGAGTTTATaGACGCCTTCTGAGTGCACAGATTCAGGGCAAAGC | + |
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Preference number: 6 (lower is better) Translates to: RCLMAFEAKQSL*TPSECTDSGQS Trigger: GCTTTGCCCTGAATCTGTGCACTCAGAAGGCGTTCATAAACTCTGCTTTGCCTCAAAAGCCATTAAACACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS CCA 72 bp | AGTTTCCTTATGTTCCAGGACTTTTGTGAGATACGCTaGTCTTCTTGGTGCAGACAAAGCTGGTGTCATCAG | + |
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Preference number: 6 (lower is better) Translates to: SFLMFQDFCEIR*SSWCRQSWCHQ Trigger: CTGATGACACCAGCTTTGTCTGCACCAAGAAGACCAGCGTATCTCACAAAAGTCCTGGAACATAAGGAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS CAA 72 bp | CAGGCTGTGACATTTTTCTGCCACATAGTTGGCTATTaGTTCTGGTGTCAGGTTAGCCTTGATCTCACACAC | + |
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Preference number: 6 (lower is better) Translates to: QAVTFFCHIVGY*FWCQVSLDLTH Trigger: GTGTGTGAGATCAAGGCTAACCTGACACCAGAACAAATAGCCAACTATGTGGCAGAAAAATGTCACAGCCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS CAA 72 bp | TATACTGTCCTCTGTCTTCTCGTCTCCTGTACAGAATaGCTATGTCTTGGGGCAGATAGCCCTCATGAAACA | + |
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Preference number: 6 (lower is better) Translates to: YTVLCLLVSCTE*LCLGADSPHET Trigger: TGTTTCATGAGGGCTATCTGCCCCAAGACATAGCAATTCTGTACAGGAGACGAGAAGACAGAGGACAGTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS TCA 72 bp | AGAGGATCTCTTTTGGTTTGCAGTGGAACACATCCTTaGTTTTCTCCACCATCTTTATGGCAAGAGCTGTCT | + |
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Preference number: 6 (lower is better) Translates to: RGSLLVCSGTHP*FSPPSLWQELS Trigger: AGACAGCTCTTGCCATAAAGATGGTGGAGAAAATCAAGGATGTGTTCCACTGCAAACCAAAAGAGATCCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS CAA 72 bp | AAGAGGATCTCTTTTGGTTTGCAGTGGAACACATCCTaGATTTTCTCCACCATCTTTATGGCAAGAGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: KRISFGLQWNTS*IFSTIFMARAV Trigger: GACAGCTCTTGCCATAAAGATGGTGGAGAAAATCAAGGATGTGTTCCACTGCAAACCAAAAGAGATCCTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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| CDS CAA 90 bp | TCACAAACAAAGAGGATCTCTTTTGGTTTGCAGTGGAACACATCCTaGATTTTCTCCACCATCTTTATGGCAAGAGCTGTCTTCCTGGTT | + |
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Preference number: 6 (lower is better) Translates to: SQTKRISFGLQWNTS*IFSTIFMARAVFLV Trigger: AACCAGGAAGACAGCTCTTGCCATAAAGATGGTGGAGAAAATCAAGGATGTGTTCCACTGCAAACCAAAAGAGATCCTCTTTGTTTGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163961.3 |
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