Pregenerated sensors for SLFN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078763Ensembl transcript IDs: ENSMUST00000037994.8
Found 35 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GCATGGGGAAGGGGTAGGAGTGAAACTGAATCGAGGATTTCTAGAAGACATGCCGAAACAGAGCTCAACTaGGGAGATGTTGGGGTTGGG | + |
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Preference number: 2 (lower is better) Translates to: AWGRGRSETESRISRRHAETELN*GDVGVG Trigger: CCCAACCCCAACATCTCCCCAGTTGAGCTCTGTTTC...GGCATGTCTTCTAGAAATCCTCGATTCAGTTTCACTCCTACCCCTTCCCCATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037994.8 |
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| 3UTR-3UTR TCA 90 bp | TGCTGGGAACTCTGCAGACTCGGTGTGCAGGTGCTGGTCTGGCCTCATCTCAGATATTATCTAATAAGGTaGCTGAGAGGAGAGAAGGTT | + |
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Preference number: 2 (lower is better) Translates to: CWELCRLGVQVLVWPHLRYYLIR*LRGEKV Trigger: AACCTTCTCTCCTCTCAGTCACCTTATTAGATAATA...TCTGAGATGAGGCCAGACCAGCACCTGCACACCGAGTCTGCAGAGTTCCCAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037994.8 |
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| 3UTR GCA 72 bp | GCAGCTGCTGGGAACTCTGCAGACTCGGTGTGCAGGTaGTGGTCTGGCCTCATCTCAGAGCTTCTTCTTGCA | + |
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Preference number: 3 (lower is better) Translates to: AAAGNSADSVCR*WSGLISELLLA Trigger: TGCAAGAAGAAGCTCTGAGATGAGGCCAGACCAGCACCTGCACACCGAGTCTGCAGAGTTCCCAGCAGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037994.8 |
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| 3UTR GCA 72 bp | ACAGAAGCAGCTGCTGGGAACTCTGCAGACTCGGTGTaGAGGTGCTGGTCTGGCCTCATCTCAGAGCTTCTT | + |
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Preference number: 3 (lower is better) Translates to: TEAAAGNSADSV*RCWSGLISELL Trigger: AAGAAGCTCTGAGATGAGGCCAGACCAGCACCTGCACACCGAGTCTGCAGAGTTCCCAGCAGCTGCTTCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037994.8 |
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| 3UTR-3UTR CAA 90 bp | GCATGGGGAAGGGGTAGGAGTGAAACTGAATCGAGGATTTCTAGAAGACATGCCCTAAACGTATTCCAATaGCCAGCTCTCCTTCCTGAA | + |
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Preference number: 3 (lower is better) Translates to: AWGRGRSETESRISRRHALNVFQ*PALLPE Trigger: TTCAGGAAGGAGAGCTGGCAATTGGAATACGTTTAG...GGCATGTCTTCTAGAAATCCTCGATTCAGTTTCACTCCTACCCCTTCCCCATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037994.8 |
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| CDS-3UTR GCA 90 bp | ACTCGGTGTGCAGGTGCTGGTCTGGCCTCATCTCAGAGCTTCTTCTTGCAAAGCCTCTGCAGCAAACACTaGGCAGCAGAACCTCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: TRCAGAGLASSQSFFLQSLCSKH*AAEPLH Trigger: GTGGAGAGGTTCTGCTGCGCAGTGTTTGCTGCAGAG...GCTTTGCAAGAAGAAGCTCTGAGATGAGGCCAGACCAGCACCTGCACACCGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037994.8 |
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| CDS-3UTR TCA 90 bp | GCATGGGGAAGGGGTAGGAGTGAAACTGAATCGAGGATTTCTAGAAGACATGCCGCAGCAGCCAACTCCTaGATGTGGCCTTCCTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: AWGRGRSETESRISRRHAAAANS*MWPSSC Trigger: GCAAGAGGAAGGCCACATTCAGGAGTTGGCTGCTGC...GGCATGTCTTCTAGAAATCCTCGATTCAGTTTCACTCCTACCCCTTCCCCATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037994.8 |
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| CDS-3UTR CCA 90 bp | GGAACTCTGCAGACTCGGTGTGCAGGTGCTGGTCTGGCCTCATCTCAGAGCTTCTTCTCATGTACAAATTaGTTGCAATGGTGGCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: GTLQTRCAGAGLASSQSFFSCTN*LQWWQA Trigger: AGCCTGCCACCATTGCAACCAATTTGTACATGAGAA...GAAGCTCTGAGATGAGGCCAGACCAGCACCTGCACACCGAGTCTGCAGAGTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037994.8 |
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| CDS-3UTR TCA 90 bp | TGCTGGGAACTCTGCAGACTCGGTGTGCAGGTGCTGGTCTGGCCTCATCTCAGAGACATCTGGACTCTGTaGTTTTTCTACACAGATGAA | + |
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Preference number: 4 (lower is better) Translates to: CWELCRLGVQVLVWPHLRDIWTL*FFYTDE Trigger: TTCATCTGTGTAGAAAAATCACAGAGTCCAGATGTC...TCTGAGATGAGGCCAGACCAGCACCTGCACACCGAGTCTGCAGAGTTCCCAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037994.8 |
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| CDS-3UTR TCA 90 bp | GGAACTCTGCAGACTCGGTGTGCAGGTGCTGGTCTGGCCTCATCTCAGAGCTTCTTCCTCCTGCAACCTTaGTATTGTCTAAGAACTTCT | + |
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Preference number: 4 (lower is better) Translates to: GTLQTRCAGAGLASSQSFFLLQP*YCLRTS Trigger: AGAAGTTCTTAGACAATATCAAGGTTGCAGGAGGAA...GAAGCTCTGAGATGAGGCCAGACCAGCACCTGCACACCGAGTCTGCAGAGTTCC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037994.8 |
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| CDS-3UTR TCA 90 bp | AAAACCCTTCCAACATCCCCAGCTAAACGTATTCCAATTGCCAGCTCTCCTTCCCTCTCCTCACAGAAGTaGGTGACAGGCAGCTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: KTLPTSPAKRIPIASSPSLSSQK*VTGSCW Trigger: CCAACAGCTGCCTGTCACTCACTTCTGTGAGGAGAG...GGAAGGAGAGCTGGCAATTGGAATACGTTTAGCTGGGGATGTTGGAAGGGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037994.8 |
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| CDS-3UTR TCA 90 bp | ACTCGGTGTGCAGGTGCTGGTCTGGCCTCATCTCAGAGCTTCTTCTTGCAAAGCTTGTCTAAGAACTTCTaGGCAGCATCCAAGTTCATT | + |
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Preference number: 4 (lower is better) Translates to: TRCAGAGLASSQSFFLQSLSKNF*AASKFI Trigger: AATGAACTTGGATGCTGCTCAGAAGTTCTTAGACAA...GCTTTGCAAGAAGAAGCTCTGAGATGAGGCCAGACCAGCACCTGCACACCGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037994.8 |
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| CDS-3UTR TCA 90 bp | GAAACTGAATCGAGGATTTCTAGAAGACATGCCAGCTCCAGAAACAGAGCTCAACCTCACAGAAGTGAGTaGCAGGCAGCTGTTGGATGC | + |
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Preference number: 4 (lower is better) Translates to: ETESRISRRHASSRNRAQPHRSE*QAAVGC Trigger: GCATCCAACAGCTGCCTGTCACTCACTTCTGTGAGG...TTGAGCTCTGTTTCTGGAGCTGGCATGTCTTCTAGAAATCCTCGATTCAGTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037994.8 |
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| CDS-3UTR CCA 90 bp | GCATGGGGAAGGGGTAGGAGTGAAACTGAATCGAGGATTTCTAGAAGACATGCCAATTGGTTGCAATGGTaGCAGGCTTCCCAACAGAGA | + |
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Preference number: 4 (lower is better) Translates to: AWGRGRSETESRISRRHANWLQW*QASQQR Trigger: TCTCTGTTGGGAAGCCTGCCACCATTGCAACCAATT...GGCATGTCTTCTAGAAATCCTCGATTCAGTTTCACTCCTACCCCTTCCCCATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037994.8 |
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| CDS-3UTR CCA 90 bp | GGAGTTGAGGTAACACCAGCGAGAGAGGGATCTGGGCTCCCAGGTAGGTTACAGTCTAAGCACTTAGGCTaGCAATTCTTTGCTTCAAAA | + |
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Preference number: 4 (lower is better) Translates to: GVEVTPAREGSGLPGRLQSKHLG*QFFASK Trigger: TTTTGAAGCAAAGAATTGCCAGCCTAAGTGCTTAGA...CTGTAACCTACCTGGGAGCCCAGATCCCTCTCTCGCTGGTGTTACCTCAACTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037994.8 |
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| CDS-3UTR TCA 90 bp | GCATGGGGAAGGGGTAGGAGTGAAACTGAATCGAGGATTTCTAGAAGACATGCCTCTGGATTTTTAATGTaGGCCTTGACCTTTCCCTCT | + |
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Preference number: 4 (lower is better) Translates to: AWGRGRSETESRISRRHASGFLM*ALTFPS Trigger: AGAGGGAAAGGTCAAGGCTCACATTAAAAATCCAGA...GGCATGTCTTCTAGAAATCCTCGATTCAGTTTCACTCCTACCCCTTCCCCATGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000037994.8 |
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| CDS-3UTR CCA 90 bp | AAAACCCTTCCAACATCCCCAGCTAAACGTATTCCAATTGCCAGCTCTCCTTCCTGTCATGATTCTCCATaGTTTTCCTACTTTCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: KTLPTSPAKRIPIASSPSCHDSP*FSYFLS Trigger: GGACAGAAAGTAGGAAAACCATGGAGAATCATGACA...GGAAGGAGAGCTGGCAATTGGAATACGTTTAGCTGGGGATGTTGGAAGGGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037994.8 |
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| CDS-3UTR TCA 90 bp | GAAACTGAATCGAGGATTTCTAGAAGACATGCCAGCTCCAGAAACAGAGCTCAATCTTCTACCCTGTCATaGTTCTCCATGGTTTTCCTA | + |
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Preference number: 4 (lower is better) Translates to: ETESRISRRHASSRNRAQSSTLS*FSMVFL Trigger: TAGGAAAACCATGGAGAATCATGACAGGGTAGAAGA...TTGAGCTCTGTTTCTGGAGCTGGCATGTCTTCTAGAAATCCTCGATTCAGTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037994.8 |
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| CDS-3UTR GCA 90 bp | AAAACCCTTCCAACATCCCCAGCTAAACGTATTCCAATTGCCAGCTCTCCTTCCAGGCTGGCAATTCTTTaGTTCAAAACCAACTATTTC | + |
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Preference number: 4 (lower is better) Translates to: KTLPTSPAKRIPIASSPSRLAIL*FKTNYF Trigger: GAAATAGTTGGTTTTGAAGCAAAGAATTGCCAGCCT...GGAAGGAGAGCTGGCAATTGGAATACGTTTAGCTGGGGATGTTGGAAGGGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037994.8 |
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| CDS-3UTR CAA 90 bp | GGGGTAGGAGTGAAACTGAATCGAGGATTTCTAGAAGACATGCCAGCTCCAGAATCATGTACAAATTGGTaGCAATGGTGGCAGGCTTCC | + |
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Preference number: 5 (lower is better) Translates to: GVGVKLNRGFLEDMPAPESCTNW*QWWQAS Trigger: GGAAGCCTGCCACCATTGCAACCAATTTGTACATGA...TTCTGGAGCTGGCATGTCTTCTAGAAATCCTCGATTCAGTTTCACTCCTACCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037994.8 |
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| CDS-3UTR CAA 90 bp | GAAACTGAATCGAGGATTTCTAGAAGACATGCCAGCTCCAGAAACAGAGCTCAATATCCCCCGTCAGTGTaGGCAAAGGCAGAAACAGTT | + |
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Preference number: 5 (lower is better) Translates to: ETESRISRRHASSRNRAQYPPSV*AKAETV Trigger: AACTGTTTCTGCCTTTGCCAACACTGACGGGGGATA...TTGAGCTCTGTTTCTGGAGCTGGCATGTCTTCTAGAAATCCTCGATTCAGTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037994.8 |
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| CDS TCA 90 bp | GAAGGCGACCTTCCTCCTGCAACCTTGATATTGTCTAAGAACTTCTaGGCAGCATCCAAGTTCATTTCAACTGATGATGCCCCATTTCTC | + |
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Preference number: 5 (lower is better) Translates to: EGDLPPATLILSKNF*AASKFISTDDAPFL Trigger: GAGAAATGGGGCATCATCAGTTGAAATGAACTTGGATGCTGCTCAGAAGTTCTTAGACAATATCAAGGTTGCAGGAGGAAGGTCGCCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037994.8 |
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| CDS TCA 90 bp | GCACACAGAGCTTTTGTAATGTTCCTGTTCTCTTCTACCCTGTCATaGTTCTCCATGGTTTTCCTACTTTCTGTCCCAAGTGTGATCCCT | + |
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Preference number: 5 (lower is better) Translates to: AHRAFVMFLFSSTLS*FSMVFLLSVPSVIP Trigger: AGGGATCACACTTGGGACAGAAAGTAGGAAAACCATGGAGAATCATGACAGGGTAGAAGAGAACAGGAACATTACAAAAGCTCTGTGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037994.8 |
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| CDS CCA 90 bp | CAACTGATGATGCCCCATTTCTCATGTACAAATTGGTTGCAATGGTaGCAGGCTTCCCAACAGAGACATCTGGACTCTGTGATTTTTCTA | + |
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Preference number: 5 (lower is better) Translates to: QLMMPHFSCTNWLQW*QASQQRHLDSVIFL Trigger: TAGAAAAATCACAGAGTCCAGATGTCTCTGTTGGGAAGCCTGCCACCATTGCAACCAATTTGTACATGAGAAATGGGGCATCATCAGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037994.8 |
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| CDS TCA 90 bp | ATGAATTTGCACTTGTACTTGATCTTCTCCCTCTCCTCACAGAAGTaGGTGACAGGCAGCTGTTGGATGCACTTTTCTATTTCACTCTCT | + |
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Preference number: 5 (lower is better) Translates to: MNLHLYLIFSLSSQK*VTGSCWMHFSISLS Trigger: AGAGAGTGAAATAGAAAAGTGCATCCAACAGCTGCCTGTCACTCACTTCTGTGAGGAGAGGGAGAAGATCAAGTACAAGTGCAAATTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037994.8 |
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| CDS-3UTR CAA 90 bp | AAAACCCTTCCAACATCCCCAGCTAAACGTATTCCAATTGCCAGCTCTCCTTCCGATGGCAAAATGTTCTaGAAAGAGGTTTCCAAATCT | + |
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Preference number: 5 (lower is better) Translates to: KTLPTSPAKRIPIASSPSDGKMF*KEVSKS Trigger: AGATTTGGAAACCTCTTTCAAGAACATTTTGCCATC...GGAAGGAGAGCTGGCAATTGGAATACGTTTAGCTGGGGATGTTGGAAGGGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037994.8 |
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| CDS TCA 90 bp | GGTTGCAATGGTGGCAGGCTTCCCAACAGAGACATCTGGACTCTGTaGTTTTTCTACACAGATGAAAAAGTAGGATTGATATTGCTTAAA | + |
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Preference number: 5 (lower is better) Translates to: GCNGGRLPNRDIWTL*FFYTDEKVGLILLK Trigger: TTTAAGCAATATCAATCCTACTTTTTCATCTGTGTAGAAAAATCACAGAGTCCAGATGTCTCTGTTGGGAAGCCTGCCACCATTGCAACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000037994.8 |
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| CDS TCA 72 bp | AAGGCCTTGCTGAAGGCGACCTTCCTCCTGCAACCTTaGTATTGTCTAAGAACTTCTGAGCAGCATCCAAGT | + |
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Preference number: 6 (lower is better) Translates to: KALLKATFLLQP*YCLRTSEQHPS Trigger: ACTTGGATGCTGCTCAGAAGTTCTTAGACAATATCAAGGTTGCAGGAGGAAGGTCGCCTTCAGCAAGGCCTT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037994.8 |
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| CDS CCA 72 bp | ATGCCCCATTTCTCATGTACAAATTGGTTGCAATGGTaGCAGGCTTCCCAACAGAGACATCTGGACTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: MPHFSCTNWLQW*QASQQRHLDSV Trigger: CACAGAGTCCAGATGTCTCTGTTGGGAAGCCTGCCACCATTGCAACCAATTTGTACATGAGAAATGGGGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037994.8 |
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| CDS TCA 72 bp | CACTTGTACTTGATCTTCTCCCTCTCCTCACAGAAGTaGGTGACAGGCAGCTGTTGGATGCACTTTTCTATT | + |
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Preference number: 6 (lower is better) Translates to: HLYLIFSLSSQK*VTGSCWMHFSI Trigger: AATAGAAAAGTGCATCCAACAGCTGCCTGTCACTCACTTCTGTGAGGAGAGGGAGAAGATCAAGTACAAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037994.8 |
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| CDS CCA 72 bp | TTTCAACTGATGATGCCCCATTTCTCATGTACAAATTaGTTGCAATGGTGGCAGGCTTCCCAACAGAGACAT | + |
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Preference number: 6 (lower is better) Translates to: FQLMMPHFSCTN*LQWWQASQQRH Trigger: ATGTCTCTGTTGGGAAGCCTGCCACCATTGCAACCAATTTGTACATGAGAAATGGGGCATCATCAGTTGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037994.8 |
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| CDS CAA 72 bp | ATTTCAACTGATGATGCCCCATTTCTCATGTACAAATaGGTTGCAATGGTGGCAGGCTTCCCAACAGAGACA | + |
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Preference number: 6 (lower is better) Translates to: ISTDDAPFLMYK*VAMVAGFPTET Trigger: TGTCTCTGTTGGGAAGCCTGCCACCATTGCAACCAATTTGTACATGAGAAATGGGGCATCATCAGTTGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037994.8 |
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| CDS TCA 72 bp | CTTCCTCCTGCAACCTTGATATTGTCTAAGAACTTCTaGGCAGCATCCAAGTTCATTTCAACTGATGATGCC | + |
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Preference number: 6 (lower is better) Translates to: LPPATLILSKNF*AASKFISTDDA Trigger: GGCATCATCAGTTGAAATGAACTTGGATGCTGCTCAGAAGTTCTTAGACAATATCAAGGTTGCAGGAGGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037994.8 |
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| CDS CCA 72 bp | AGCGCACACACATATTTACACACAACTCCGGAATCGTaGACTTCGATGAATTTGCACTTGTACTTGATCTTC | + |
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Preference number: 6 (lower is better) Translates to: SAHTYLHTTPES*TSMNLHLYLIF Trigger: GAAGATCAAGTACAAGTGCAAATTCATCGAAGTCCACGATTCCGGAGTTGTGTGTAAATATGTGTGTGCGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037994.8 |
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| CDS TCA 72 bp | GCTTTTGTAATGTTCCTGTTCTCTTCTACCCTGTCATaGTTCTCCATGGTTTTCCTACTTTCTGTCCCAAGT | + |
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Preference number: 6 (lower is better) Translates to: AFVMFLFSSTLS*FSMVFLLSVPS Trigger: ACTTGGGACAGAAAGTAGGAAAACCATGGAGAATCATGACAGGGTAGAAGAGAACAGGAACATTACAAAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037994.8 |
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