Pregenerated sensors for SLCO6D1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026336Ensembl transcript IDs: ENSMUST00000027575.13, ENSMUST00000160796.2, ENSMUST00000162468.8
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGCTGTCTCAAGCTAGCAGTTGTGGTTCCTCAGGGTGTTTTCTTTaGGAGGGGTTCCCTCTAAATGTCCAGGGAGCAGGAGGGAGTCCT | + |
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Preference number: 1 (lower is better) Translates to: RLSQASSCGSSGCFL*EGFPLNVQGAGGSP Trigger: AGGACTCCCTCCTGCTCCCTGGACATTTAGAGGGAACCCCTCCCAAAGAAAACACCCTGAGGAACCACAACTGCTAGCTTGAGACAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162468.8 |
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| 3UTR TCA 90 bp | TGCATCTGGAGAGTTCAGCCATTTATCAGAGAGAGTGCTAGTTTTTaGCAATGCAGAAGTGAGGGAGGCTGTCTCAAGCTAGCAGTTGTG | + |
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Preference number: 1 (lower is better) Translates to: CIWRVQPFIRESASF*QCRSEGGCLKLAVV Trigger: CACAACTGCTAGCTTGAGACAGCCTCCCTCACTTCTGCATTGTCAAAAACTAGCACTCTCTCTGATAAATGGCTGAACTCTCCAGATGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162468.8 |
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| 3UTR TCA 90 bp | GACATTAAACCCAAACTCATTGAATTCCAACTGGTAGGTACACTTTaGATGACAATCAAGGCGGAAGGTATACTACAGAAACTAGACAAA | + |
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Preference number: 1 (lower is better) Translates to: DIKPKLIEFQLVGTL*MTIKAEGILQKLDK Trigger: TTTGTCTAGTTTCTGTAGTATACCTTCCGCCTTGATTGTCATTCAAAGTGTACCTACCAGTTGGAATTCAATGAGTTTGGGTTTAATGTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162468.8 |
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| 3UTR TCA 90 bp | GTAAGGCATCTGGTATTACATGTTCCAGAAACAGCATCAATATATTaGCCTTCATTATCAGCAGTTGTCAATCCTTCTTTGATGCAAGAA | + |
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Preference number: 1 (lower is better) Translates to: VRHLVLHVPETASIY*PSLSAVVNPSLMQE Trigger: TTCTTGCATCAAAGAAGGATTGACAACTGCTGATAATGAAGGTCAATATATTGATGCTGTTTCTGGAACATGTAATACCAGATGCCTTAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162468.8 |
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| 3UTR TCA 90 bp | TACCACATAATCATGTCTGTAAACCCCGTAAAGACAACTCAAGCCTaGCAATATTTGCATGTTAATCCATACTGTCTTAAATGTGTAGAC | + |
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Preference number: 1 (lower is better) Translates to: YHIIMSVNPVKTTQA*QYLHVNPYCLKCVD Trigger: GTCTACACATTTAAGACAGTATGGATTAACATGCAAATATTGTCAGGCTTGAGTTGTCTTTACGGGGTTTACAGACATGATTATGTGGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162468.8 |
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| 3UTR-3UTR CCA 90 bp | ACATTCCGAAGGACGGGCAGCTGCTGCATCTGGAGAGTTCAGCCATTTATCAGACTGTGCTTGCTGCAGTaGGAGACAGAGCAGAAGTCC | + |
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Preference number: 2 (lower is better) Translates to: TFRRTGSCCIWRVQPFIRLCLLQ*ETEQKS Trigger: GGACTTCTGCTCTGTCTCCCACTGCAGCAAGCACAG...TCTGATAAATGGCTGAACTCTCCAGATGCAGCAGCTGCCCGTCCTTCGGAATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162468.8 |
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| 3UTR-3UTR CCA 90 bp | TTTGTTATTTCTTTCTTACATTCCGAAGGACGGGCAGCTGCTGCATCTGGAGAGGTGACGGTCATGGCCTaGAGGGAGAATAGGAGCTTT | + |
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Preference number: 2 (lower is better) Translates to: FVISFLHSEGRAAAASGEVTVMA*RENRSF Trigger: AAAGCTCCTATTCTCCCTCCAGGCCATGACCGTCAC...CTCTCCAGATGCAGCAGCTGCCCGTCCTTCGGAATGTAAGAAAGAAATAACAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162468.8 |
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| 3UTR-3UTR GCA 90 bp | ATTCTCCTGACCTTGAGGATTATTTTTACCGTACTATTGGAGACCAGCTTTATGCAGGAGGGAGTCCTGTaGTTGCTGCAGTGGGAGACA | + |
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Preference number: 2 (lower is better) Translates to: ILLTLRIIFTVLLETSFMQEGVL*LLQWET Trigger: TGTCTCCCACTGCAGCAAGCACAGGACTCCCTCCTG...CATAAAGCTGGTCTCCAATAGTACGGTAAAAATAATCCTCAAGGTCAGGAGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162468.8 |
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| 3UTR-3UTR GCA 90 bp | AGTGCAACACCAAGTCCGGAAAGCATTGTGCTTATATACATCACATTTAGGAATAGGACGGGCAGCTGCTaGATCTGGAGAGTTCAGCCA | + |
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Preference number: 2 (lower is better) Translates to: SATPSPESIVLIYITFRNRTGSC*IWRVQP Trigger: TGGCTGAACTCTCCAGATGCAGCAGCTGCCCGTCCT...ATTCCTAAATGTGATGTATATAAGCACAATGCTTTCCGGACTTGGTGTTGCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162468.8 |
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| 3UTR-3UTR TCA 90 bp | ACATTCCGAAGGACGGGCAGCTGCTGCATCTGGAGAGTTCAGCCATTTATCAGAGATTCCAGCAAACTTTaGTATTTCACACTCCACAAA | + |
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Preference number: 2 (lower is better) Translates to: TFRRTGSCCIWRVQPFIRDSSKL*YFTLHK Trigger: TTTGTGGAGTGTGAAATATCAAAGTTTGCTGGAATC...TCTGATAAATGGCTGAACTCTCCAGATGCAGCAGCTGCCCGTCCTTCGGAATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162468.8 |
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| 3UTR-3UTR TCA 90 bp | GGAGTGCAACACCAAGTCCGGAAAGCATTGTGCTTATATACATCACATTTAGGACAGGAACAGAGCCAGTaGATCTCCAAACTGTCGACA | + |
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Preference number: 2 (lower is better) Translates to: GVQHQVRKALCLYTSHLGQEQSQ*ISKLST Trigger: TGTCGACAGTTTGGAGATTCACTGGCTCTGTTCCTG...TCCTAAATGTGATGTATATAAGCACAATGCTTTCCGGACTTGGTGTTGCACTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162468.8 |
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| 3UTR-3UTR TCA 90 bp | TTTGTTATTTCTTTCTTACATTCCGAAGGACGGGCAGCTGCTGCATCTGGAGAGGAGAGTGCTAGTTTTTaGCAATGCAGAAGTGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: FVISFLHSEGRAAAASGEESASF*QCRSEG Trigger: TCCCTCACTTCTGCATTGTCAAAAACTAGCACTCTC...CTCTCCAGATGCAGCAGCTGCCCGTCCTTCGGAATGTAAGAAAGAAATAACAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162468.8 |
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| 3UTR-3UTR GCA 90 bp | ATTCTCCTGACCTTGAGGATTATTTTTACCGTACTATTGGAGACCAGCTTTATGGAGTCCTGTGCTTGCTaGAGTGGGAGACAGAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: ILLTLRIIFTVLLETSFMESCAC*SGRQSR Trigger: TCTGCTCTGTCTCCCACTGCAGCAAGCACAGGACTC...CATAAAGCTGGTCTCCAATAGTACGGTAAAAATAATCCTCAAGGTCAGGAGAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162468.8 |
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| 3UTR-3UTR TCA 90 bp | AGTGCAACACCAAGTCCGGAAAGCATTGTGCTTATATACATCACATTTAGGAATCAGAGCAGAAGTCCATaGTGGCCTGCATACAGTGAC | + |
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Preference number: 2 (lower is better) Translates to: SATPSPESIVLIYITFRNQSRSP*WPAYSD Trigger: GTCACTGTATGCAGGCCATCATGGACTTCTGCTCTG...ATTCCTAAATGTGATGTATATAAGCACAATGCTTTCCGGACTTGGTGTTGCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162468.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGTGAATCTCCAAACTGTCGACATTAAACCCAAACTCATTGAATTCCAACTGACAGGGCACATTGCATaGAGCTGTGAGGTTTCCAAT | + |
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Preference number: 2 (lower is better) Translates to: PVNLQTVDIKPKLIEFQLTGHIA*SCEVSN Trigger: ATTGGAAACCTCACAGCTCCATGCAATGTGCCCTGT...CAGTTGGAATTCAATGAGTTTGGGTTTAATGTCGACAGTTTGGAGATTCACTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162468.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGTGCAACACCAAGTCCGGAAAGCATTGTGCTTATATACATCACATTTAGGATCAGGGTGTTTTCTTTaGGAGGGGTTCCCTCTAAAT | + |
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Preference number: 2 (lower is better) Translates to: GVQHQVRKALCLYTSHLGSGCFL*EGFPLN Trigger: ATTTAGAGGGAACCCCTCCCAAAGAAAACACCCTGA...TCCTAAATGTGATGTATATAAGCACAATGCTTTCCGGACTTGGTGTTGCACTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162468.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGTGAATCTCCAAACTGTCGACATTAAACCCAAACTCATTGAATTCCAACTGAGTAGCTTTGCAACCTaGAAAGCAGGGAGAGAAATA | + |
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Preference number: 2 (lower is better) Translates to: PVNLQTVDIKPKLIEFQLSSFAT*KAGREI Trigger: TATTTCTCTCCCTGCTTTGCAGGTTGCAAAGCTACT...CAGTTGGAATTCAATGAGTTTGGGTTTAATGTCGACAGTTTGGAGATTCACTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162468.8 |
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| 3UTR-3UTR GCA 90 bp | TTTGTTATTTCTTTCTTACATTCCGAAGGACGGGCAGCTGCTGCATCTGGAGAGAAGCCTGACAATATTTaGATGTTAATCCATACTGTC | + |
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Preference number: 2 (lower is better) Translates to: FVISFLHSEGRAAAASGEKPDNI*MLIHTV Trigger: GACAGTATGGATTAACATGCAAATATTGTCAGGCTT...CTCTCCAGATGCAGCAGCTGCCCGTCCTTCGGAATGTAAGAAAGAAATAACAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162468.8 |
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| 3UTR-3UTR CCA 90 bp | AGTGCAACACCAAGTCCGGAAAGCATTGTGCTTATATACATCACATTTAGGAATAATTTGCATACTACTTaGGACAGCACCAGTGGGTTC | + |
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Preference number: 2 (lower is better) Translates to: SATPSPESIVLIYITFRNNLHTT*DSTSGF Trigger: GAACCCACTGGTGCTGTCCCAAGTAGTATGCAAATT...ATTCCTAAATGTGATGTATATAAGCACAATGCTTTCCGGACTTGGTGTTGCACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162468.8 |
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| 3UTR CAA 90 bp | TGTAAGGCATCTGGTATTACATGTTCCAGAAACAGCATCAATATATaGACCTTCATTATCAGCAGTTGTCAATCCTTCTTTGATGCAAGA | + |
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Preference number: 2 (lower is better) Translates to: CKASGITCSRNSINI*TFIISSCQSFFDAR Trigger: TCTTGCATCAAAGAAGGATTGACAACTGCTGATAATGAAGGTCAATATATTGATGCTGTTTCTGGAACATGTAATACCAGATGCCTTACA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162468.8 |
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| 3UTR-3UTR CAA 90 bp | ACATTCCGAAGGACGGGCAGCTGCTGCATCTGGAGAGTTCAGCCATTTATCAGACAACCACAGGGCACATaGCATGGAGCTGTGAGGTTT | + |
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Preference number: 3 (lower is better) Translates to: TFRRTGSCCIWRVQPFIRQPQGT*HGAVRF Trigger: AAACCTCACAGCTCCATGCAATGTGCCCTGTGGTTG...TCTGATAAATGGCTGAACTCTCCAGATGCAGCAGCTGCCCGTCCTTCGGAATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162468.8 |
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| 3UTR-3UTR CAA 90 bp | GGAGTGCAACACCAAGTCCGGAAAGCATTGTGCTTATATACATCACATTTAGGAGAGGGAGTCCTGTGCTaGCTGCAGTGGGAGACAGAG | + |
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Preference number: 3 (lower is better) Translates to: GVQHQVRKALCLYTSHLGEGVLC*LQWETE Trigger: CTCTGTCTCCCACTGCAGCAAGCACAGGACTCCCTC...TCCTAAATGTGATGTATATAAGCACAATGCTTTCCGGACTTGGTGTTGCACTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162468.8 |
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| 3UTR-3UTR CAA 90 bp | ACATTCCGAAGGACGGGCAGCTGCTGCATCTGGAGAGTTCAGCCATTTATCAGAACTGGTAGGTACACTTaGAATGACAATCAAGGCGGA | + |
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Preference number: 3 (lower is better) Translates to: TFRRTGSCCIWRVQPFIRTGRYT*NDNQGG Trigger: TCCGCCTTGATTGTCATTCAAAGTGTACCTACCAGT...TCTGATAAATGGCTGAACTCTCCAGATGCAGCAGCTGCCCGTCCTTCGGAATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162468.8 |
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| 3UTR GCA 72 bp | TATTTCTTTCTTACATTCCGAAGGACGGGCAGCTGCTaGATCTGGAGAGTTCAGCCATTTATCAGAGAGAGT | + |
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Preference number: 3 (lower is better) Translates to: YFFLTFRRTGSC*IWRVQPFIRES Trigger: ACTCTCTCTGATAAATGGCTGAACTCTCCAGATGCAGCAGCTGCCCGTCCTTCGGAATGTAAGAAAGAAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162468.8 |
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| 3UTR TCA 72 bp | ACTTGGGACAGCACCAGTGGGTTCCTTATTAGACACTaGTATCAAGAGCAATGTAGAGCCACAGTAGACAAA | + |
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Preference number: 3 (lower is better) Translates to: TWDSTSGFLIRH*YQEQCRATVDK Trigger: TTTGTCTACTGTGGCTCTACATTGCTCTTGATATCAGTGTCTAATAAGGAACCCACTGGTGCTGTCCCAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162468.8 |
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| 3UTR TCA 72 bp | AGAGTTCAGCCATTTATCAGAGAGAGTGCTAGTTTTTaGCAATGCAGAAGTGAGGGAGGCTGTCTCAAGCTA | + |
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Preference number: 3 (lower is better) Translates to: RVQPFIRESASF*QCRSEGGCLKL Trigger: TAGCTTGAGACAGCCTCCCTCACTTCTGCATTGTCAAAAACTAGCACTCTCTCTGATAAATGGCTGAACTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162468.8 |
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| 3UTR-3UTR CAA 90 bp | GGAGTGCAACACCAAGTCCGGAAAGCATTGTGCTTATATACATCACATTTAGGATTGCTGCAAATAATATaGGTGCAGGAACAGAGCCAG | + |
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Preference number: 3 (lower is better) Translates to: GVQHQVRKALCLYTSHLGLLQII*VQEQSQ Trigger: CTGGCTCTGTTCCTGCACCAATATTATTTGCAGCAA...TCCTAAATGTGATGTATATAAGCACAATGCTTTCCGGACTTGGTGTTGCACTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162468.8 |
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| 3UTR TCA 72 bp | GACATGATATCATTTGTTCAGGCGGAATTGAGCAGTTaGGAGGGGGATTCTCCTGACCTTGAGGATTATTTT | + |
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Preference number: 3 (lower is better) Translates to: DMISFVQAELSS*EGDSPDLEDYF Trigger: AAAATAATCCTCAAGGTCAGGAGAATCCCCCTCTCAACTGCTCAATTCCGCCTGAACAAATGATATCATGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162468.8 |
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| 3UTR-3UTR CAA 90 bp | GGAGTGCAACACCAAGTCCGGAAAGCATTGTGCTTATATACATCACATTTAGGAGATTATATTCAGAAGTaGTACAACCACAGGGCACAT | + |
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Preference number: 3 (lower is better) Translates to: GVQHQVRKALCLYTSHLGDYIQK*YNHRAH Trigger: ATGTGCCCTGTGGTTGTACAACTTCTGAATATAATC...TCCTAAATGTGATGTATATAAGCACAATGCTTTCCGGACTTGGTGTTGCACTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162468.8 |
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| 3UTR-3UTR CAA 90 bp | ATTCTCCTGACCTTGAGGATTATTTTTACCGTACTATTGGAGACCAGCTTTATGGTAAACTCTGTGAATTaGCATACTACTTGGGACAGC | + |
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Preference number: 3 (lower is better) Translates to: ILLTLRIIFTVLLETSFMVNSVN*HTTWDS Trigger: GCTGTCCCAAGTAGTATGCAAATTCACAGAGTTTAC...CATAAAGCTGGTCTCCAATAGTACGGTAAAAATAATCCTCAAGGTCAGGAGAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162468.8 |
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| 3UTR GCA 72 bp | CAGGATGGAGTGCAACACCAAGTCCGGAAAGCATTGTaGTTATATACATCACATTTAGGAATTCTTTGTATG | + |
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Preference number: 3 (lower is better) Translates to: QDGVQHQVRKAL*LYTSHLGILCM Trigger: CATACAAAGAATTCCTAAATGTGATGTATATAAGCACAATGCTTTCCGGACTTGGTGTTGCACTCCATCCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162468.8 |
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| 3UTR TCA 72 bp | ATTGACCTTCATTATCAGCAGTTGTCAATCCTTCTTTaGTGCAAGAACAATTGTAGTATGTCTTTTCCTTCC | + |
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Preference number: 3 (lower is better) Translates to: IDLHYQQLSILL*CKNNCSMSFPS Trigger: GGAAGGAAAAGACATACTACAATTGTTCTTGCATCAAAGAAGGATTGACAACTGCTGATAATGAAGGTCAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162468.8 |
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| 3UTR TCA 72 bp | ATCATGTCTGTAAACCCCGTAAAGACAACTCAAGCCTaGCAATATTTGCATGTTAATCCATACTGTCTTAAA | + |
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Preference number: 3 (lower is better) Translates to: IMSVNPVKTTQA*QYLHVNPYCLK Trigger: TTTAAGACAGTATGGATTAACATGCAAATATTGTCAGGCTTGAGTTGTCTTTACGGGGTTTACAGACATGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162468.8 |
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| CDS-3UTR CCA 90 bp | ACATTCCGAAGGACGGGCAGCTGCTGCATCTGGAGAGTTCAGCCATTTATCAGAAGAGCCCAAACCATATaGCTCCTCCGAGGGATCTTT | + |
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Preference number: 4 (lower is better) Translates to: TFRRTGSCCIWRVQPFIRRAQTI*LLRGIF Trigger: AAAGATCCCTCGGAGGAGCCATATGGTTTGGGCTCT...TCTGATAAATGGCTGAACTCTCCAGATGCAGCAGCTGCCCGTCCTTCGGAATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162468.8 |
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| CDS-3UTR GCA 90 bp | ACATTCCGAAGGACGGGCAGCTGCTGCATCTGGAGAGTTCAGCCATTTATCAGACGATGTCCAACTGCTTaGATAACTTCTTGCGCAGAC | + |
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Preference number: 4 (lower is better) Translates to: TFRRTGSCCIWRVQPFIRRCPTA*ITSCAD Trigger: GTCTGCGCAAGAAGTTATGCAAGCAGTTGGACATCG...TCTGATAAATGGCTGAACTCTCCAGATGCAGCAGCTGCCCGTCCTTCGGAATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162468.8 |
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| CDS-3UTR TCA 90 bp | CCAGTGAATCTCCAAACTGTCGACATTAAACCCAAACTCATTGAATTCCAACTGTCCATGTCTACCACCTaGGCCTGCTTCACTGCATCT | + |
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Preference number: 4 (lower is better) Translates to: PVNLQTVDIKPKLIEFQLSMSTT*ACFTAS Trigger: AGATGCAGTGAAGCAGGCTCAGGTGGTAGACATGGA...CAGTTGGAATTCAATGAGTTTGGGTTTAATGTCGACAGTTTGGAGATTCACTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162468.8 |
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| CDS-3UTR TCA 90 bp | TTTGTTATTTCTTTCTTACATTCCGAAGGACGGGCAGCTGCTGCATCTGGAGAGAAGGTAGGAGGTTCCTaGCTTTTCTCAAGTCTTATC | + |
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Preference number: 4 (lower is better) Translates to: FVISFLHSEGRAAAASGEKVGGS*LFSSLI Trigger: GATAAGACTTGAGAAAAGTCAGGAACCTCCTACCTT...CTCTCCAGATGCAGCAGCTGCCCGTCCTTCGGAATGTAAGAAAGAAATAACAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162468.8 |
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| CDS-3UTR CCA 90 bp | TGTTATTTCTTTCTTACATTCCGAAGGACGGGCAGCTGCTGCATCTGGAGAGTTCTTCTTCACTGCAGTTaGAAGTGTTACCAGGAACAT | + |
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Preference number: 4 (lower is better) Translates to: CYFFLTFRRTGSCCIWRVLLHCS*KCYQEH Trigger: ATGTTCCTGGTAACACTTCCAACTGCAGTGAAGAAG...AACTCTCCAGATGCAGCAGCTGCCCGTCCTTCGGAATGTAAGAAAGAAATAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162468.8 |
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| CDS-3UTR TCA 90 bp | AGACCACATCTTATGAAAACTTCAAAGAATAGACTGCAGTCCTTAGAACTCAGATCCATGTCTACCACCTaGGCCTGCTTCACTGCATCT | + |
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Preference number: 4 (lower is better) Translates to: RPHLMKTSKNRLQSLELRSMSTT*ACFTAS Trigger: AGATGCAGTGAAGCAGGCTCAGGTGGTAGACATGGA...TCTGAGTTCTAAGGACTGCAGTCTATTCTTTGAAGTTTTCATAAGATGTGGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027575.13 |
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| 3UTR CAA 72 bp | GGATTATATTCAGAAGTTGTACAACCACAGGGCACATaGCATGGAGCTGTGAGGTTTCCAATTATACCAAGC | + |
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Preference number: 4 (lower is better) Translates to: GLYSEVVQPQGT*HGAVRFPIIPS Trigger: GCTTGGTATAATTGGAAACCTCACAGCTCCATGCAATGTGCCCTGTGGTTGTACAACTTCTGAATATAATCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162468.8 |
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| CDS-3UTR TCA 90 bp | AGACCACATCTTATGAAAACTTCAAAGAATAGACTGCAGTCCTTAGAACTCAGACAGGAACAGAGCCAGTaGATCTCCAAACTGTCGACA | + |
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Preference number: 4 (lower is better) Translates to: RPHLMKTSKNRLQSLELRQEQSQ*ISKLST Trigger: TGTCGACAGTTTGGAGATTCACTGGCTCTGTTCCTG...TCTGAGTTCTAAGGACTGCAGTCTATTCTTTGAAGTTTTCATAAGATGTGGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027575.13 |
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| CDS-3UTR CCA 90 bp | TGGCATAGACCACATCTTATGAAAACTTCAAAGAATAGACTGCAGTCCTTAGAAAGAGCCCAAACCATATaGCTCCTCCGAGGGATCTTT | + |
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Preference number: 4 (lower is better) Translates to: WHRPHLMKTSKNRLQSLERAQTI*LLRGIF Trigger: AAAGATCCCTCGGAGGAGCCATATGGTTTGGGCTCT...TTCTAAGGACTGCAGTCTATTCTTTGAAGTTTTCATAAGATGTGGTCTATGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027575.13 |
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| CDS-3UTR CCA 90 bp | TGGCATAGACCACATCTTATGAAAACTTCAAAGAATAGACTGCAGTCCTTAGAAAAGCCTGCTATTCCATaGAGACACTGCCCGAAGATG | + |
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Preference number: 4 (lower is better) Translates to: WHRPHLMKTSKNRLQSLEKPAIP*RHCPKM Trigger: CATCTTCGGGCAGTGTCTCCATGGAATAGCAGGCTT...TTCTAAGGACTGCAGTCTATTCTTTGAAGTTTTCATAAGATGTGGTCTATGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027575.13 |
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| CDS-3UTR GCA 90 bp | CCACATCTTATGAAAACTTCAAAGAATAGACTGCAGTCCTTAGAACTCAGAACACGATGTCCAACTGCTTaGATAACTTCTTGCGCAGAC | + |
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Preference number: 4 (lower is better) Translates to: PHLMKTSKNRLQSLELRTRCPTA*ITSCAD Trigger: GTCTGCGCAAGAAGTTATGCAAGCAGTTGGACATCG...TGTTCTGAGTTCTAAGGACTGCAGTCTATTCTTTGAAGTTTTCATAAGATGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027575.13 |
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| CDS-3UTR CCA 90 bp | GAATACAGTGAAGCAAAAATACAACTCTGTAGGTCCAGTCATCTATACCCAGCTGGCAAGTATATACAATaGCAAGCCTGCTATTCCATG | + |
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Preference number: 4 (lower is better) Translates to: EYSEAKIQLCRSSHLYPAGKYIQ*QACYSM Trigger: CATGGAATAGCAGGCTTGCCATTGTATATACTTGCC...AGCTGGGTATAGATGACTGGACCTACAGAGTTGTATTTTTGCTTCACTGTATTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162468.8 |
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| CDS-3UTR CCA 90 bp | AGACCACATCTTATGAAAACTTCAAAGAATAGACTGCAGTCCTTAGAACTCAGAACAGGGCACATTGCATaGAGCTGTGAGGTTTCCAAT | + |
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Preference number: 4 (lower is better) Translates to: RPHLMKTSKNRLQSLELRTGHIA*SCEVSN Trigger: ATTGGAAACCTCACAGCTCCATGCAATGTGCCCTGT...TCTGAGTTCTAAGGACTGCAGTCTATTCTTTGAAGTTTTCATAAGATGTGGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027575.13 |
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| CDS-3UTR GCA 90 bp | GAATACAGTGAAGCAAAAATACAACTCTGTAGGTCCAGTCATCTATACCCAGCTCATATCTGGTGTATCTaGAAACTTCTTCACTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: EYSEAKIQLCRSSHLYPAHIWCI*KLLHCS Trigger: ACTGCAGTGAAGAAGTTTGCAGATACACCAGATATG...AGCTGGGTATAGATGACTGGACCTACAGAGTTGTATTTTTGCTTCACTGTATTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162468.8 |
||
| CDS-3UTR CCA 90 bp | AGACCACATCTTATGAAAACTTCAAAGAATAGACTGCAGTCCTTAGAACTCAGAAATTTGCATACTACTTaGGACAGCACCAGTGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RPHLMKTSKNRLQSLELRNLHTT*DSTSGF Trigger: GAACCCACTGGTGCTGTCCCAAGTAGTATGCAAATT...TCTGAGTTCTAAGGACTGCAGTCTATTCTTTGAAGTTTTCATAAGATGTGGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027575.13 |
||
| CDS-3UTR TCA 90 bp | CCACATCTTATGAAAACTTCAAAGAATAGACTGCAGTCCTTAGAACTCAGAACAAAGGTAGGAGGTTCCTaGCTTTTCTCAAGTCTTATC | + |
|
Preference number: 4 (lower is better) Translates to: PHLMKTSKNRLQSLELRTKVGGS*LFSSLI Trigger: GATAAGACTTGAGAAAAGTCAGGAACCTCCTACCTT...TGTTCTGAGTTCTAAGGACTGCAGTCTATTCTTTGAAGTTTTCATAAGATGTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027575.13 |
||
| CDS-3UTR GCA 90 bp | GAATACAGTGAAGCAAAAATACAACTCTGTAGGTCCAGTCATCTATACCCAGCTCTGAGCCTGCTTCACTaGATCTTTTTGTTTTATCTT | + |
|
Preference number: 4 (lower is better) Translates to: EYSEAKIQLCRSSHLYPALSLLH*IFLFYL Trigger: AAGATAAAACAAAAAGATGCAGTGAAGCAGGCTCAG...AGCTGGGTATAGATGACTGGACCTACAGAGTTGTATTTTTGCTTCACTGTATTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000162468.8 |
||
| CDS-3UTR GCA 90 bp | TGGCATAGACCACATCTTATGAAAACTTCAAAGAATAGACTGCAGTCCTTAGAAAGTAGCTTTGCAACCTaGAAAGCAGGGAGAGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: WHRPHLMKTSKNRLQSLESSFAT*KAGREI Trigger: TATTTCTCTCCCTGCTTTGCAGGTTGCAAAGCTACT...TTCTAAGGACTGCAGTCTATTCTTTGAAGTTTTCATAAGATGTGGTCTATGCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027575.13 |
||
| CDS-3UTR CCA 90 bp | CTTATGAAAACTTCAAAGAATAGACTGCAGTCCTTAGAACTCAGAACATCACAGCTTCTTCACTGCAGTTaGAAGTGTTACCAGGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: LMKTSKNRLQSLELRTSQLLHCS*KCYQEH Trigger: ATGTTCCTGGTAACACTTCCAACTGCAGTGAAGAAG...CTGTGATGTTCTGAGTTCTAAGGACTGCAGTCTATTCTTTGAAGTTTTCATAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027575.13 |
||
| CDS-3UTR CCA 90 bp | CCACATCTTATGAAAACTTCAAAGAATAGACTGCAGTCCTTAGAACTCAGAACAGGCAAGTATATACAATaGCAAGCCTGCTATTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: PHLMKTSKNRLQSLELRTGKYIQ*QACYSM Trigger: CATGGAATAGCAGGCTTGCCATTGTATATACTTGCC...TGTTCTGAGTTCTAAGGACTGCAGTCTATTCTTTGAAGTTTTCATAAGATGTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027575.13 |
||
| CDS-3UTR GCA 90 bp | CTTATGAAAACTTCAAAGAATAGACTGCAGTCCTTAGAACTCAGAACATCACAGCATATCTGGTGTATCTaGAAACTTCTTCACTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LMKTSKNRLQSLELRTSQHIWCI*KLLHCS Trigger: ACTGCAGTGAAGAAGTTTGCAGATACACCAGATATG...CTGTGATGTTCTGAGTTCTAAGGACTGCAGTCTATTCTTTGAAGTTTTCATAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027575.13 |
||
| CDS-3UTR TCA 90 bp | CCACATCTTATGAAAACTTCAAAGAATAGACTGCAGTCCTTAGAACTCAGAACAGTGTGCTACAAACATTaGGAACAGAAAAGCAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: PHLMKTSKNRLQSLELRTVCYKH*EQKSNK Trigger: TTTGTTGCTTTTCTGTTCTCAATGTTTGTAGCACAC...TGTTCTGAGTTCTAAGGACTGCAGTCTATTCTTTGAAGTTTTCATAAGATGTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027575.13 |
||
| CDS-3UTR TCA 90 bp | CCACATCTTATGAAAACTTCAAAGAATAGACTGCAGTCCTTAGAACTCAGAACAAGACACCAAGTAGCATaGAGAACACTCTTCAAATTA | + |
|
Preference number: 4 (lower is better) Translates to: PHLMKTSKNRLQSLELRTRHQVA*RTLFKL Trigger: TAATTTGAAGAGTGTTCTTCATGCTACTTGGTGTCT...TGTTCTGAGTTCTAAGGACTGCAGTCTATTCTTTGAAGTTTTCATAAGATGTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027575.13 |
||
| CDS-3UTR TCA 90 bp | CCACATCTTATGAAAACTTCAAAGAATAGACTGCAGTCCTTAGAACTCAGAACAGATTCCAGCAAACTTTaGTATTTCACACTCCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: PHLMKTSKNRLQSLELRTDSSKL*YFTLHK Trigger: TTTGTGGAGTGTGAAATATCAAAGTTTGCTGGAATC...TGTTCTGAGTTCTAAGGACTGCAGTCTATTCTTTGAAGTTTTCATAAGATGTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027575.13 |
||
| CDS-3UTR GCA 90 bp | TGGCATAGACCACATCTTATGAAAACTTCAAAGAATAGACTGCAGTCCTTAGAACTGAGCCTGCTTCACTaGATCTTTTTGTTTTATCTT | + |
|
Preference number: 4 (lower is better) Translates to: WHRPHLMKTSKNRLQSLELSLLH*IFLFYL Trigger: AAGATAAAACAAAAAGATGCAGTGAAGCAGGCTCAG...TTCTAAGGACTGCAGTCTATTCTTTGAAGTTTTCATAAGATGTGGTCTATGCCA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027575.13 |
||
| CDS-3UTR GCA 90 bp | CTTATGAAAACTTCAAAGAATAGACTGCAGTCCTTAGAACTCAGAACATCACAGGCTTGCATAACTTCTTaGGCAGACATCTTAAAATTT | + |
|
Preference number: 4 (lower is better) Translates to: LMKTSKNRLQSLELRTSQACITS*ADILKF Trigger: AAATTTTAAGATGTCTGCGCAAGAAGTTATGCAAGC...CTGTGATGTTCTGAGTTCTAAGGACTGCAGTCTATTCTTTGAAGTTTTCATAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027575.13 |
||
| CDS-3UTR GCA 90 bp | CTTATGAAAACTTCAAAGAATAGACTGCAGTCCTTAGAACTCAGAACATCACAGAAGCCTGACAATATTTaGATGTTAATCCATACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LMKTSKNRLQSLELRTSQKPDNI*MLIHTV Trigger: GACAGTATGGATTAACATGCAAATATTGTCAGGCTT...CTGTGATGTTCTGAGTTCTAAGGACTGCAGTCTATTCTTTGAAGTTTTCATAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027575.13 |
||
| CDS CCA 90 bp | TGTGGGAACGTGGTCAAAAATAAAGCTTGTGGCAAGTATATACAATaGCAAGCCTGCTATTCCATGGAGACACTGCCCGAAGATGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: CGNVVKNKACGKYIQ*QACYSMETLPEDED Trigger: ATCTTCATCTTCGGGCAGTGTCTCCATGGAATAGCAGGCTTGCCATTGTATATACTTGCCACAAGCTTTATTTTTGACCACGTTCCCACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027575.13 ENSMUST00000160796.2 ENSMUST00000162468.8 |
||
| CDS-3UTR CAA 90 bp | AGTGCAACACCAAGTCCGGAAAGCATTGTGCTTATATACATCACATTTAGGAATCAGCTGCCACCCAATTaGCTCTATTTCCTCTACCTC | + |
|
Preference number: 5 (lower is better) Translates to: SATPSPESIVLIYITFRNQLPPN*LYFLYL Trigger: GAGGTAGAGGAAATAGAGCAAATTGGGTGGCAGCTG...ATTCCTAAATGTGATGTATATAAGCACAATGCTTTCCGGACTTGGTGTTGCACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162468.8 |
||
| CDS-3UTR CAA 90 bp | CCACATCTTATGAAAACTTCAAAGAATAGACTGCAGTCCTTAGAACTCAGAACACAACCACAGGGCACATaGCATGGAGCTGTGAGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: PHLMKTSKNRLQSLELRTQPQGT*HGAVRF Trigger: AAACCTCACAGCTCCATGCAATGTGCCCTGTGGTTG...TGTTCTGAGTTCTAAGGACTGCAGTCTATTCTTTGAAGTTTTCATAAGATGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027575.13 |
||
| CDS-3UTR CAA 90 bp | GAATACAGTGAAGCAAAAATACAACTCTGTAGGTCCAGTCATCTATACCCAGCTACTTCTTCACTGCAGTaGGAAGTGTTACCAGGAACA | + |
|
Preference number: 5 (lower is better) Translates to: EYSEAKIQLCRSSHLYPATSSLQ*EVLPGT Trigger: TGTTCCTGGTAACACTTCCAACTGCAGTGAAGAAGT...AGCTGGGTATAGATGACTGGACCTACAGAGTTGTATTTTTGCTTCACTGTATTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162468.8 |
||
| CDS-3UTR CAA 90 bp | TGGCATAGACCACATCTTATGAAAACTTCAAAGAATAGACTGCAGTCCTTAGAACAGCTGCCACCCAATTaGCTCTATTTCCTCTACCTC | + |
|
Preference number: 5 (lower is better) Translates to: WHRPHLMKTSKNRLQSLEQLPPN*LYFLYL Trigger: GAGGTAGAGGAAATAGAGCAAATTGGGTGGCAGCTG...TTCTAAGGACTGCAGTCTATTCTTTGAAGTTTTCATAAGATGTGGTCTATGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027575.13 |
||
| CDS-3UTR CAA 90 bp | ATTCTCCTGACCTTGAGGATTATTTTTACCGTACTATTGGAGACCAGCTTTATGCTTCACTGCATCTTTTaGTTTTATCTTGTCCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: ILLTLRIIFTVLLETSFMLHCIF*FYLVLG Trigger: GCCCAGGACAAGATAAAACAAAAAGATGCAGTGAAG...CATAAAGCTGGTCTCCAATAGTACGGTAAAAATAATCCTCAAGGTCAGGAGAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000162468.8 |
||
| CDS-3UTR CAA 90 bp | AGACCACATCTTATGAAAACTTCAAAGAATAGACTGCAGTCCTTAGAACTCAGAACTTCTTCACTGCAGTaGGAAGTGTTACCAGGAACA | + |
|
Preference number: 5 (lower is better) Translates to: RPHLMKTSKNRLQSLELRTSSLQ*EVLPGT Trigger: TGTTCCTGGTAACACTTCCAACTGCAGTGAAGAAGT...TCTGAGTTCTAAGGACTGCAGTCTATTCTTTGAAGTTTTCATAAGATGTGGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027575.13 |
||
| CDS-3UTR CAA 90 bp | GGAGTGCAACACCAAGTCCGGAAAGCATTGTGCTTATATACATCACATTTAGGAGAACAGCAAAAACAATaGCAGCAATTCCTGTTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: GVQHQVRKALCLYTSHLGEQQKQ*QQFLLE Trigger: TTCTAACAGGAATTGCTGCAATTGTTTTTGCTGTTC...TCCTAAATGTGATGTATATAAGCACAATGCTTTCCGGACTTGGTGTTGCACTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162468.8 |
||
| CDS-3UTR CAA 90 bp | GGAGTGCAACACCAAGTCCGGAAAGCATTGTGCTTATATACATCACATTTAGGACCAACAGTGGTAAAGTaGTACAAAATGCAAATACAG | + |
|
Preference number: 5 (lower is better) Translates to: GVQHQVRKALCLYTSHLGPTVVK*YKMQIQ Trigger: CTGTATTTGCATTTTGTACAACTTTACCACTGTTGG...TCCTAAATGTGATGTATATAAGCACAATGCTTTCCGGACTTGGTGTTGCACTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162468.8 |
||
| CDS-3UTR CAA 90 bp | AGACCACATCTTATGAAAACTTCAAAGAATAGACTGCAGTCCTTAGAACTCAGAAGCTTTTTAGTAGCTTaGCAACCTGCAAAGCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: RPHLMKTSKNRLQSLELRSFLVA*QPAKQG Trigger: TCCCTGCTTTGCAGGTTGCAAAGCTACTAAAAAGCT...TCTGAGTTCTAAGGACTGCAGTCTATTCTTTGAAGTTTTCATAAGATGTGGTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027575.13 |
||
| CDS-3UTR CAA 90 bp | TGGCATAGACCACATCTTATGAAAACTTCAAAGAATAGACTGCAGTCCTTAGAAACTGGTAGGTACACTTaGAATGACAATCAAGGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: WHRPHLMKTSKNRLQSLETGRYT*NDNQGG Trigger: TCCGCCTTGATTGTCATTCAAAGTGTACCTACCAGT...TTCTAAGGACTGCAGTCTATTCTTTGAAGTTTTCATAAGATGTGGTCTATGCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027575.13 |
||
| CDS-3UTR CAA 90 bp | AGACCACATCTTATGAAAACTTCAAAGAATAGACTGCAGTCCTTAGAACTCAGATTGCTGCAAATAATATaGGTGCAGGAACAGAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RPHLMKTSKNRLQSLELRLLQII*VQEQSQ Trigger: CTGGCTCTGTTCCTGCACCAATATTATTTGCAGCAA...TCTGAGTTCTAAGGACTGCAGTCTATTCTTTGAAGTTTTCATAAGATGTGGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027575.13 |
||
| CDS-3UTR CAA 90 bp | AGACCACATCTTATGAAAACTTCAAAGAATAGACTGCAGTCCTTAGAACTCAGACTTCACTGCATCTTTTaGTTTTATCTTGTCCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RPHLMKTSKNRLQSLELRLHCIF*FYLVLG Trigger: GCCCAGGACAAGATAAAACAAAAAGATGCAGTGAAG...TCTGAGTTCTAAGGACTGCAGTCTATTCTTTGAAGTTTTCATAAGATGTGGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027575.13 |
||
| CDS-3UTR CAA 90 bp | AGACCACATCTTATGAAAACTTCAAAGAATAGACTGCAGTCCTTAGAACTCAGAGTAAACTCTGTGAATTaGCATACTACTTGGGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: RPHLMKTSKNRLQSLELRVNSVN*HTTWDS Trigger: GCTGTCCCAAGTAGTATGCAAATTCACAGAGTTTAC...TCTGAGTTCTAAGGACTGCAGTCTATTCTTTGAAGTTTTCATAAGATGTGGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027575.13 |
||
| CDS-3UTR CAA 90 bp | AGTGCAACACCAAGTCCGGAAAGCATTGTGCTTATATACATCACATTTAGGAATTGCTTGCATAACTTCTaGCGCAGACATCTTAAAATT | + |
|
Preference number: 5 (lower is better) Translates to: SATPSPESIVLIYITFRNCLHNF*RRHLKI Trigger: AATTTTAAGATGTCTGCGCAAGAAGTTATGCAAGCA...ATTCCTAAATGTGATGTATATAAGCACAATGCTTTCCGGACTTGGTGTTGCACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162468.8 |
||
| CDS-3UTR CAA 90 bp | CCACATCTTATGAAAACTTCAAAGAATAGACTGCAGTCCTTAGAACTCAGAACAGATTATATTCAGAAGTaGTACAACCACAGGGCACAT | + |
|
Preference number: 5 (lower is better) Translates to: PHLMKTSKNRLQSLELRTDYIQK*YNHRAH Trigger: ATGTGCCCTGTGGTTGTACAACTTCTGAATATAATC...TGTTCTGAGTTCTAAGGACTGCAGTCTATTCTTTGAAGTTTTCATAAGATGTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027575.13 |
||
| CDS-3UTR CAA 90 bp | CTTATGAAAACTTCAAAGAATAGACTGCAGTCCTTAGAACTCAGAACATCACAGAGTGTGCTACAAACATaGAGAACAGAAAAGCAACAA | + |
|
Preference number: 5 (lower is better) Translates to: LMKTSKNRLQSLELRTSQSVLQT*RTEKQQ Trigger: TTGTTGCTTTTCTGTTCTCAATGTTTGTAGCACACT...CTGTGATGTTCTGAGTTCTAAGGACTGCAGTCTATTCTTTGAAGTTTTCATAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027575.13 |
||
| CDS-3UTR CAA 90 bp | CCACATCTTATGAAAACTTCAAAGAATAGACTGCAGTCCTTAGAACTCAGAACAGAACAGCAAAAACAATaGCAGCAATTCCTGTTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: PHLMKTSKNRLQSLELRTEQQKQ*QQFLLE Trigger: TTCTAACAGGAATTGCTGCAATTGTTTTTGCTGTTC...TGTTCTGAGTTCTAAGGACTGCAGTCTATTCTTTGAAGTTTTCATAAGATGTGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027575.13 |
||
| CDS-3UTR CAA 90 bp | TGGCATAGACCACATCTTATGAAAACTTCAAAGAATAGACTGCAGTCCTTAGAATGCTTGCATAACTTCTaGCGCAGACATCTTAAAATT | + |
|
Preference number: 5 (lower is better) Translates to: WHRPHLMKTSKNRLQSLECLHNF*RRHLKI Trigger: AATTTTAAGATGTCTGCGCAAGAAGTTATGCAAGCA...TTCTAAGGACTGCAGTCTATTCTTTGAAGTTTTCATAAGATGTGGTCTATGCCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027575.13 |
||
| CDS-3UTR CAA 90 bp | CTTATGAAAACTTCAAAGAATAGACTGCAGTCCTTAGAACTCAGAACATCACAGCCAACAGTGGTAAAGTaGTACAAAATGCAAATACAG | + |
|
Preference number: 5 (lower is better) Translates to: LMKTSKNRLQSLELRTSQPTVVK*YKMQIQ Trigger: CTGTATTTGCATTTTGTACAACTTTACCACTGTTGG...CTGTGATGTTCTGAGTTCTAAGGACTGCAGTCTATTCTTTGAAGTTTTCATAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027575.13 |
||
| CDS TCA 72 bp | CAATTTGCTCTATTTCCTCTACCTCCAAAGTGTGTATaGGCCACGACCGCTAAAAACGACAGAGTCAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: QFALFPLPPKCV*ATTAKNDRVRK Trigger: CTTCCTGACTCTGTCGTTTTTAGCGGTCGTGGCTCATACACACTTTGGAGGTAGAGGAAATAGAGCAAATTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162468.8 |
||
| CDS CAA 72 bp | CAATTCCTGTTAGAAAGCAGCCAGCTGCCACCCAATTaGCTCTATTTCCTCTACCTCCAAAGTGTGCTACAA | + |
|
Preference number: 6 (lower is better) Translates to: QFLLESSQLPPN*LYFLYLQSVLQ Trigger: TTGTAGCACACTTTGGAGGTAGAGGAAATAGAGCAAATTGGGTGGCAGCTGGCTGCTTTCTAACAGGAATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027575.13 ENSMUST00000160796.2 |
||
| CDS CCA 72 bp | GTGGTCAAAAATAAAGCTTGTGGCAAGTATATACAATaGCAAGCCTGCTATTCCATGGAGACACTGCCCGAA | + |
|
Preference number: 6 (lower is better) Translates to: VVKNKACGKYIQ*QACYSMETLPE Trigger: TTCGGGCAGTGTCTCCATGGAATAGCAGGCTTGCCATTGTATATACTTGCCACAAGCTTTATTTTTGACCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027575.13 ENSMUST00000160796.2 ENSMUST00000162468.8 |
||
| CDS CAA 72 bp | GCTAAAAACGACAGAGTCAGGAAGGACTTAACATTGTaGAAACGCTGTAAACAAGGGAAAACGAGAGAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: AKNDRVRKDLTL*KRCKQGKTREP Trigger: GGGCTCTCTCGTTTTCCCTTGTTTACAGCGTTTCAACAATGTTAAGTCCTTCCTGACTCTGTCGTTTTTAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027575.13 ENSMUST00000160796.2 ENSMUST00000162468.8 |
||
| CDS CAA 72 bp | ACCGCTAAAAACGACAGAGTCAGGAAGGACTTAACATaGTTGAAACGCTGTAAACAAGGGAAAACGAGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: TAKNDRVRKDLT*LKRCKQGKTRE Trigger: CTCTCTCGTTTTCCCTTGTTTACAGCGTTTCAACAATGTTAAGTCCTTCCTGACTCTGTCGTTTTTAGCGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027575.13 ENSMUST00000160796.2 ENSMUST00000162468.8 |
||
| CDS GCA 72 bp | ATATACAATGGCAAGCCTGCTATTCCATGGAGACACTaGCCGAAGATGAAGATAAAGATACAAATTGATTTG | + |
|
Preference number: 6 (lower is better) Translates to: IYNGKPAIPWRH*PKMKIKIQIDL Trigger: CAAATCAATTTGTATCTTTATCTTCATCTTCGGGCAGTGTCTCCATGGAATAGCAGGCTTGCCATTGTATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027575.13 ENSMUST00000160796.2 ENSMUST00000162468.8 |
||
| CDS CCA 72 bp | TTAAAAGTTGTAAACTCTGTGAATTTGCATACTACTTaGGACAGCACCAGTGGGTTCCTTATTAGACACCAA | + |
|
Preference number: 6 (lower is better) Translates to: LKVVNSVNLHTT*DSTSGFLIRHQ Trigger: TTGGTGTCTAATAAGGAACCCACTGGTGCTGTCCCAAGTAGTATGCAAATTCACAGAGTTTACAACTTTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027575.13 ENSMUST00000160796.2 |
||
| CDS CAA 72 bp | CACTGCCCGAAGATGAAGATAAAGATACAAATTGATTaGTGTGGCAATACCGTTGGTTCACAAACTTTAGGT | + |
|
Preference number: 6 (lower is better) Translates to: HCPKMKIKIQID*CGNTVGSQTLG Trigger: ACCTAAAGTTTGTGAACCAACGGTATTGCCACACAAATCAATTTGTATCTTTATCTTCATCTTCGGGCAGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027575.13 ENSMUST00000160796.2 ENSMUST00000162468.8 |
||
| CDS TCA 72 bp | AGCACCAGTGGGTTCCTTATTAGACACCAAGTAGCATaGAGAACACTCTTCAAATTATTCTTAATTTCCTTA | + |
|
Preference number: 6 (lower is better) Translates to: STSGFLIRHQVA*RTLFKLFLISL Trigger: TAAGGAAATTAAGAATAATTTGAAGAGTGTTCTTCATGCTACTTGGTGTCTAATAAGGAACCCACTGGTGCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027575.13 ENSMUST00000160796.2 |
||