Pregenerated sensors for SLCO6C1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026331Ensembl transcript IDs: ENSMUST00000027569.14, ENSMUST00000189547.2
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | CCTGAAATCTATGCTAACATCCCACAAGCTGGTATGTaGAAACTGACTCCTGAGAACTGCTCAGGTATGACA | + |
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Preference number: 3 (lower is better) Translates to: PEIYANIPQAGM*KLTPENCSGMT Trigger: TGTCATACCTGAGCAGTTCTCAGGAGTCAGTTTTCACATACCAGCTTGTGGGATGTTAGCATAGATTTCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027569.14 |
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| CDS-3UTR CCA 90 bp | CCCCTCAATAAAACTAAGAAAGTGCTAATCCTTAGTGAGGTAACCCAATCACAAAGGGCCCAAACCAAGTaGCCCCTCCTTGGAAGCACT | + |
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Preference number: 4 (lower is better) Translates to: PLNKTKKVLILSEVTQSQRAQTK*PLLGST Trigger: AGTGCTTCCAAGGAGGGGCCACTTGGTTTGGGCCCT...TTGTGATTGGGTTACCTCACTAAGGATTAGCACTTTCTTAGTTTTATTGAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027569.14 |
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| CDS-3UTR TCA 90 bp | CCCCTCAATAAAACTAAGAAAGTGCTAATCCTTAGTGAGGTAACCCAATCACAAGTACAAATGCTCCTGTaGGCAGAGAGGCAATTCCGG | + |
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Preference number: 4 (lower is better) Translates to: PLNKTKKVLILSEVTQSQVQMLL*AERQFR Trigger: CCGGAATTGCCTCTCTGCTCACAGGAGCATTTGTAC...TTGTGATTGGGTTACCTCACTAAGGATTAGCACTTTCTTAGTTTTATTGAGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027569.14 |
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| CDS-3UTR GCA 90 bp | CCCCTCAATAAAACTAAGAAAGTGCTAATCCTTAGTGAGGTAACCCAATCACAATTGGCATCCCTGCTATaGCATGGATACACTGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: PLNKTKKVLILSEVTQSQLASLL*HGYTAQ Trigger: CTGGGCAGTGTATCCATGGCATAGCAGGGATGCCAA...TTGTGATTGGGTTACCTCACTAAGGATTAGCACTTTCTTAGTTTTATTGAGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027569.14 |
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| CDS-3UTR TCA 90 bp | CTTAGAACTCAGAACTTCACAGATTCTCCAGTCCCAATGAAGAAATCATTTAGACACACCCAGGCTAAGTaGAGTGAAGTTGGCAGGTAC | + |
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Preference number: 4 (lower is better) Translates to: LRTQNFTDSPVPMKKSFRHTQAK*SEVGRY Trigger: GTACCTGCCAACTTCACTTCACTTAGCCTGGGTGTG...TCTAAATGATTTCTTCATTGGGACTGGAGAATCTGTGAAGTTCTGAGTTCTAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| CDS-3UTR GCA 90 bp | CTTAGAACTCAGAACTTCACAGATTCTCCAGTCCCAATGAAGAAATCATTTAGATTGGCATCCCTGCTATaGCATGGATACACTGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: LRTQNFTDSPVPMKKSFRLASLL*HGYTAQ Trigger: CTGGGCAGTGTATCCATGGCATAGCAGGGATGCCAA...TCTAAATGATTTCTTCATTGGGACTGGAGAATCTGTGAAGTTCTGAGTTCTAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| CDS-3UTR CCA 90 bp | CCCCTCAATAAAACTAAGAAAGTGCTAATCCTTAGTGAGGTAACCCAATCACAACAGTCGAAACAAGAGTaGTGCAGGGACAGATGCAAC | + |
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Preference number: 4 (lower is better) Translates to: PLNKTKKVLILSEVTQSQQSKQE*CRDRCN Trigger: GTTGCATCTGTCCCTGCACCACTCTTGTTTCGACTG...TTGTGATTGGGTTACCTCACTAAGGATTAGCACTTTCTTAGTTTTATTGAGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027569.14 |
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| CDS-3UTR TCA 90 bp | CTTAGAACTCAGAACTTCACAGATTCTCCAGTCCCAATGAAGAAATCATTTAGATCTTTGGGTGGAGGCTaGAAATTCTGCAGTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LRTQNFTDSPVPMKKSFRSLGGG*KFCSPP Trigger: AGGAGGACTGCAGAATTTTCAGCCTCCACCCAAAGA...TCTAAATGATTTCTTCATTGGGACTGGAGAATCTGTGAAGTTCTGAGTTCTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| CDS-3UTR GCA 90 bp | CTTAGAACTCAGAACTTCACAGATTCTCCAGTCCCAATGAAGAAATCATTTAGATCCAGGAAGTACAAATaGTCCTGTGAGCAGAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: LRTQNFTDSPVPMKKSFRSRKYK*SCEQRG Trigger: GCCTCTCTGCTCACAGGAGCATTTGTACTTCCTGGA...TCTAAATGATTTCTTCATTGGGACTGGAGAATCTGTGAAGTTCTGAGTTCTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| CDS-3UTR CCA 90 bp | CTTAGAACTCAGAACTTCACAGATTCTCCAGTCCCAATGAAGAAATCATTTAGACAAGTGGCCCCTCCTTaGAAGCACTGTATCTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LRTQNFTDSPVPMKKSFRQVAPP*KHCILD Trigger: ATCCAAGATACAGTGCTTCCAAGGAGGGGCCACTTG...TCTAAATGATTTCTTCATTGGGACTGGAGAATCTGTGAAGTTCTGAGTTCTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| CDS-3UTR CCA 90 bp | CTTAGAACTCAGAACTTCACAGATTCTCCAGTCCCAATGAAGAAATCATTTAGACAGTCGAAACAAGAGTaGTGCAGGGACAGATGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LRTQNFTDSPVPMKKSFRQSKQE*CRDRCN Trigger: GTTGCATCTGTCCCTGCACCACTCTTGTTTCGACTG...TCTAAATGATTTCTTCATTGGGACTGGAGAATCTGTGAAGTTCTGAGTTCTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| CDS-3UTR GCA 90 bp | CCCCTCAATAAAACTAAGAAAGTGCTAATCCTTAGTGAGGTAACCCAATCACAATGGTGCAGGGACAGATaGAACAAATTTCACAATGGC | + |
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Preference number: 4 (lower is better) Translates to: PLNKTKKVLILSEVTQSQWCRDR*NKFHNG Trigger: GCCATTGTGAAATTTGTTGCATCTGTCCCTGCACCA...TTGTGATTGGGTTACCTCACTAAGGATTAGCACTTTCTTAGTTTTATTGAGGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027569.14 |
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| CDS-3UTR GCA 90 bp | CCCCTCAATAAAACTAAGAAAGTGCTAATCCTTAGTGAGGTAACCCAATCACAATCGAAACAAGAGTGGTaGAGGGACAGATGCAACAAA | + |
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Preference number: 4 (lower is better) Translates to: PLNKTKKVLILSEVTQSQSKQEW*RDRCNK Trigger: TTTGTTGCATCTGTCCCTGCACCACTCTTGTTTCGA...TTGTGATTGGGTTACCTCACTAAGGATTAGCACTTTCTTAGTTTTATTGAGGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027569.14 |
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| CDS-3UTR GCA 90 bp | CCCCTCAATAAAACTAAGAAAGTGCTAATCCTTAGTGAGGTAACCCAATCACAACAAGTCCCATTAAAATaGAGGAAGCTGCAATCCATC | + |
|
Preference number: 4 (lower is better) Translates to: PLNKTKKVLILSEVTQSQQVPLK*RKLQSI Trigger: GATGGATTGCAGCTTCCTGCATTTTAATGGGACTTG...TTGTGATTGGGTTACCTCACTAAGGATTAGCACTTTCTTAGTTTTATTGAGGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027569.14 |
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| CDS-3UTR GCA 90 bp | CCCCTCAATAAAACTAAGAAAGTGCTAATCCTTAGTGAGGTAACCCAATCACAAATAAATTGGCATCCCTaGTATGCCATGGATACACTG | + |
|
Preference number: 4 (lower is better) Translates to: PLNKTKKVLILSEVTQSQINWHP*YAMDTL Trigger: CAGTGTATCCATGGCATAGCAGGGATGCCAATTTAT...TTGTGATTGGGTTACCTCACTAAGGATTAGCACTTTCTTAGTTTTATTGAGGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027569.14 |
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| CDS-3UTR GCA 90 bp | CTTAGAACTCAGAACTTCACAGATTCTCCAGTCCCAATGAAGAAATCATTTAGATGGTGCAGGGACAGATaGAACAAATTTCACAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: LRTQNFTDSPVPMKKSFRWCRDR*NKFHNG Trigger: GCCATTGTGAAATTTGTTGCATCTGTCCCTGCACCA...TCTAAATGATTTCTTCATTGGGACTGGAGAATCTGTGAAGTTCTGAGTTCTAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| CDS-3UTR GCA 90 bp | CTTAGAACTCAGAACTTCACAGATTCTCCAGTCCCAATGAAGAAATCATTTAGATCGAAACAAGAGTGGTaGAGGGACAGATGCAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: LRTQNFTDSPVPMKKSFRSKQEW*RDRCNK Trigger: TTTGTTGCATCTGTCCCTGCACCACTCTTGTTTCGA...TCTAAATGATTTCTTCATTGGGACTGGAGAATCTGTGAAGTTCTGAGTTCTAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| CDS-3UTR CCA 90 bp | CTTAGAACTCAGAACTTCACAGATTCTCCAGTCCCAATGAAGAAATCATTTAGAGCCAAGGATATAAATTaGCATCCCTGCTATGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LRTQNFTDSPVPMKKSFRAKDIN*HPCYAM Trigger: CATGGCATAGCAGGGATGCCAATTTATATCCTTGGC...TCTAAATGATTTCTTCATTGGGACTGGAGAATCTGTGAAGTTCTGAGTTCTAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| CDS-3UTR TCA 90 bp | CCCCTCAATAAAACTAAGAAAGTGCTAATCCTTAGTGAGGTAACCCAATCACAAGCAAATAAAGCACCATaGATTAAGACTGCTGCAACA | + |
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Preference number: 4 (lower is better) Translates to: PLNKTKKVLILSEVTQSQANKAP*IKTAAT Trigger: TGTTGCAGCAGTCTTAATTCATGGTGCTTTATTTGC...TTGTGATTGGGTTACCTCACTAAGGATTAGCACTTTCTTAGTTTTATTGAGGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027569.14 |
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| CDS-3UTR TCA 90 bp | CTTAGAACTCAGAACTTCACAGATTCTCCAGTCCCAATGAAGAAATCATTTAGATTGACCTTCATCATCTaGAGCTGCCAATCCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LRTQNFTDSPVPMKKSFRLTFII*SCQSFF Trigger: AAAGAAGGATTGGCAGCTTCAGATGATGAAGGTCAA...TCTAAATGATTTCTTCATTGGGACTGGAGAATCTGTGAAGTTCTGAGTTCTAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| CDS-3UTR GCA 90 bp | CTTAGAACTCAGAACTTCACAGATTCTCCAGTCCCAATGAAGAAATCATTTAGACAAGTCCCATTAAAATaGAGGAAGCTGCAATCCATC | + |
|
Preference number: 4 (lower is better) Translates to: LRTQNFTDSPVPMKKSFRQVPLK*RKLQSI Trigger: GATGGATTGCAGCTTCCTGCATTTTAATGGGACTTG...TCTAAATGATTTCTTCATTGGGACTGGAGAATCTGTGAAGTTCTGAGTTCTAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| CDS-3UTR GCA 90 bp | CTTAGAACTCAGAACTTCACAGATTCTCCAGTCCCAATGAAGAAATCATTTAGAATAAATTGGCATCCCTaGTATGCCATGGATACACTG | + |
|
Preference number: 4 (lower is better) Translates to: LRTQNFTDSPVPMKKSFRINWHP*YAMDTL Trigger: CAGTGTATCCATGGCATAGCAGGGATGCCAATTTAT...TCTAAATGATTTCTTCATTGGGACTGGAGAATCTGTGAAGTTCTGAGTTCTAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| CDS-3UTR GCA 90 bp | CTTAGAACTCAGAACTTCACAGATTCTCCAGTCCCAATGAAGAAATCATTTAGAAGTAGCTTTGCAGCCTaGAAAGCAGGGAGAAAAATA | + |
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Preference number: 4 (lower is better) Translates to: LRTQNFTDSPVPMKKSFRSSFAA*KAGRKI Trigger: TATTTTTCTCCCTGCTTTGCAGGCTGCAAAGCTACT...TCTAAATGATTTCTTCATTGGGACTGGAGAATCTGTGAAGTTCTGAGTTCTAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| CDS-3UTR TCA 90 bp | CTTAGAACTCAGAACTTCACAGATTCTCCAGTCCCAATGAAGAAATCATTTAGAAGCCTTTTTGTCATCTaGCTTTTTATTGCGGACATG | + |
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Preference number: 4 (lower is better) Translates to: LRTQNFTDSPVPMKKSFRSLFVI*LFIADM Trigger: CATGTCCGCAATAAAAAGTCAGATGACAAAAAGGCT...TCTAAATGATTTCTTCATTGGGACTGGAGAATCTGTGAAGTTCTGAGTTCTAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| CDS-3UTR TCA 90 bp | CTTAGAACTCAGAACTTCACAGATTCTCCAGTCCCAATGAAGAAATCATTTAGAGCAAATAAAGCACCATaGATTAAGACTGCTGCAACA | + |
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Preference number: 4 (lower is better) Translates to: LRTQNFTDSPVPMKKSFRANKAP*IKTAAT Trigger: TGTTGCAGCAGTCTTAATTCATGGTGCTTTATTTGC...TCTAAATGATTTCTTCATTGGGACTGGAGAATCTGTGAAGTTCTGAGTTCTAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| CDS-3UTR TCA 90 bp | CTTAGAACTCAGAACTTCACAGATTCTCCAGTCCCAATGAAGAAATCATTTAGAACTTTGGAGGATAATTaGGATGACAGGTATACTGCA | + |
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Preference number: 4 (lower is better) Translates to: LRTQNFTDSPVPMKKSFRTLEDN*DDRYTA Trigger: TGCAGTATACCTGTCATCTCAATTATCCTCCAAAGT...TCTAAATGATTTCTTCATTGGGACTGGAGAATCTGTGAAGTTCTGAGTTCTAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| CDS-3UTR CCA 90 bp | CTTAGAACTCAGAACTTCACAGATTCTCCAGTCCCAATGAAGAAATCATTTAGAAGACTTCTTCCTTTTTaGGAGCTTTGCGAACTTCTT | + |
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Preference number: 4 (lower is better) Translates to: LRTQNFTDSPVPMKKSFRRLLPF*ELCELL Trigger: AAGAAGTTCGCAAAGCTCCCAAAAAGGAAGAAGTCT...TCTAAATGATTTCTTCATTGGGACTGGAGAATCTGTGAAGTTCTGAGTTCTAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| CDS-3UTR CCA 90 bp | CCCCTCAATAAAACTAAGAAAGTGCTAATCCTTAGTGAGGTAACCCAATCACAAAAGTATAGAGGGAAGTaGTGCAATCACAATACTCAT | + |
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Preference number: 4 (lower is better) Translates to: PLNKTKKVLILSEVTQSQKYRGK*CNHNTH Trigger: ATGAGTATTGTGATTGCACCACTTCCCTCTATACTT...TTGTGATTGGGTTACCTCACTAAGGATTAGCACTTTCTTAGTTTTATTGAGGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027569.14 |
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| CDS-3UTR CCA 90 bp | CTTAGAACTCAGAACTTCACAGATTCTCCAGTCCCAATGAAGAAATCATTTAGATTGGCAGGTACACTTTaGAGGATAATTGAGATGACA | + |
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Preference number: 4 (lower is better) Translates to: LRTQNFTDSPVPMKKSFRLAGTL*RIIEMT Trigger: TGTCATCTCAATTATCCTCCAAAGTGTACCTGCCAA...TCTAAATGATTTCTTCATTGGGACTGGAGAATCTGTGAAGTTCTGAGTTCTAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| CDS-3UTR TCA 90 bp | CTTAGAACTCAGAACTTCACAGATTCTCCAGTCCCAATGAAGAAATCATTTAGATGTTCAACAAGACTATaGTTAATTGGGAACTCATCC | + |
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Preference number: 4 (lower is better) Translates to: LRTQNFTDSPVPMKKSFRCSTRL*LIGNSS Trigger: GGATGAGTTCCCAATTAATCATAGTCTTGTTGAACA...TCTAAATGATTTCTTCATTGGGACTGGAGAATCTGTGAAGTTCTGAGTTCTAAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| CDS-3UTR GCA 90 bp | CCCCTCAATAAAACTAAGAAAGTGCTAATCCTTAGTGAGGTAACCCAATCACAATTTCATTTTCTTCCATaGACAACTCTATGCTTTGTC | + |
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Preference number: 4 (lower is better) Translates to: PLNKTKKVLILSEVTQSQFHFLP*TTLCFV Trigger: GACAAAGCATAGAGTTGTGCATGGAAGAAAATGAAA...TTGTGATTGGGTTACCTCACTAAGGATTAGCACTTTCTTAGTTTTATTGAGGGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027569.14 |
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| CDS-3UTR CCA 90 bp | CCCCTCAATAAAACTAAGAAAGTGCTAATCCTTAGTGAGGTAACCCAATCACAATTGCGAACTTCTTCTTaGCAATTGGTATTGTTTTCA | + |
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Preference number: 4 (lower is better) Translates to: PLNKTKKVLILSEVTQSQLRTSS*QLVLFS Trigger: TGAAAACAATACCAATTGCCAAGAAGAAGTTCGCAA...TTGTGATTGGGTTACCTCACTAAGGATTAGCACTTTCTTAGTTTTATTGAGGGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027569.14 |
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| CDS-3UTR CCA 90 bp | CTTAGAACTCAGAACTTCACAGATTCTCCAGTCCCAATGAAGAAATCATTTAGAAAGTATAGAGGGAAGTaGTGCAATCACAATACTCAT | + |
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Preference number: 4 (lower is better) Translates to: LRTQNFTDSPVPMKKSFRKYRGK*CNHNTH Trigger: ATGAGTATTGTGATTGCACCACTTCCCTCTATACTT...TCTAAATGATTTCTTCATTGGGACTGGAGAATCTGTGAAGTTCTGAGTTCTAAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| CDS-3UTR CCA 90 bp | CTTAGAACTCAGAACTTCACAGATTCTCCAGTCCCAATGAAGAAATCATTTAGATTGCGAACTTCTTCTTaGCAATTGGTATTGTTTTCA | + |
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Preference number: 4 (lower is better) Translates to: LRTQNFTDSPVPMKKSFRLRTSS*QLVLFS Trigger: TGAAAACAATACCAATTGCCAAGAAGAAGTTCGCAA...TCTAAATGATTTCTTCATTGGGACTGGAGAATCTGTGAAGTTCTGAGTTCTAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| CDS-3UTR CCA 90 bp | CTTAGAACTCAGAACTTCACAGATTCTCCAGTCCCAATGAAGAAATCATTTAGATATGTCTTTTCTGTCTaGGATACTTTAGTAGCTTTG | + |
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Preference number: 4 (lower is better) Translates to: LRTQNFTDSPVPMKKSFRYVFSV*DTLVAL Trigger: CAAAGCTACTAAAGTATCCCAGACAGAAAAGACATA...TCTAAATGATTTCTTCATTGGGACTGGAGAATCTGTGAAGTTCTGAGTTCTAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| CDS-3UTR CCA 90 bp | CTTAGAACTCAGAACTTCACAGATTCTCCAGTCCCAATGAAGAAATCATTTAGAAAGACTATGATTAATTaGGAACTCATCCATATTCCC | + |
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Preference number: 4 (lower is better) Translates to: LRTQNFTDSPVPMKKSFRKTMIN*ELIHIP Trigger: GGGAATATGGATGAGTTCCCAATTAATCATAGTCTT...TCTAAATGATTTCTTCATTGGGACTGGAGAATCTGTGAAGTTCTGAGTTCTAAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| 3UTR CAA 72 bp | AAGAATATTTTAAAATCCTATACTAGAGTTAGCATATaGCTTAATGGGTTAGGATGCTTGCCCATAGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: KNILKSYTRVSI*LNGLGCLPIEV Trigger: CACCTCTATGGGCAAGCATCCTAACCCATTAAGCAATATGCTAACTCTAGTATAGGATTTTAAAATATTCTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027569.14 |
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| CDS CCA 90 bp | TGTGGGAATGTGGTCAAAAATGAAGGTTATGCCAAGGATATAAATTaGCATCCCTGCTATGCCATGGATACACTGCCCAGCGATGTGGAA | + |
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Preference number: 5 (lower is better) Translates to: CGNVVKNEGYAKDIN*HPCYAMDTLPSDVE Trigger: TTCCACATCGCTGGGCAGTGTATCCATGGCATAGCAGGGATGCCAATTTATATCCTTGGCATAACCTTCATTTTTGACCACATTCCCACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| CDS-3UTR CAA 90 bp | CCCCTCAATAAAACTAAGAAAGTGCTAATCCTTAGTGAGGTAACCCAATCACAACTGAGACTTTGCAGATaGCCTGGGTCAGCATCAGTG | + |
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Preference number: 5 (lower is better) Translates to: PLNKTKKVLILSEVTQSQLRLCR*PGSASV Trigger: CACTGATGCTGACCCAGGCAATCTGCAAAGTCTCAG...TTGTGATTGGGTTACCTCACTAAGGATTAGCACTTTCTTAGTTTTATTGAGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027569.14 |
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| CDS GCA 90 bp | GTGGTCAAAAATGAAGGTTATGCCAAGGATATAAATTGGCATCCCTaGTATGCCATGGATACACTGCCCAGCGATGTGGAAATAGATACA | + |
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Preference number: 5 (lower is better) Translates to: VVKNEGYAKDINWHP*YAMDTLPSDVEIDT Trigger: TGTATCTATTTCCACATCGCTGGGCAGTGTATCCATGGCATAGCAGGGATGCCAATTTATATCCTTGGCATAACCTTCATTTTTGACCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| CDS-3UTR CAA 90 bp | CTTAGAACTCAGAACTTCACAGATTCTCCAGTCCCAATGAAGAAATCATTTAGACTGAGACTTTGCAGATaGCCTGGGTCAGCATCAGTG | + |
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Preference number: 5 (lower is better) Translates to: LRTQNFTDSPVPMKKSFRLRLCR*PGSASV Trigger: CACTGATGCTGACCCAGGCAATCTGCAAAGTCTCAG...TCTAAATGATTTCTTCATTGGGACTGGAGAATCTGTGAAGTTCTGAGTTCTAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| CDS-3UTR CAA 90 bp | CTTAGAACTCAGAACTTCACAGATTCTCCAGTCCCAATGAAGAAATCATTTAGAGATACTTTAGTAGCTTaGCAGCCTGCAAAGCAGGGA | + |
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Preference number: 5 (lower is better) Translates to: LRTQNFTDSPVPMKKSFRDTLVA*QPAKQG Trigger: TCCCTGCTTTGCAGGCTGCAAAGCTACTAAAGTATC...TCTAAATGATTTCTTCATTGGGACTGGAGAATCTGTGAAGTTCTGAGTTCTAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| CDS TCA 90 bp | TATGCCATGGATACACTGCCCAGCGATGTGGAAATAGATACATTTTaGTCTGTTCGGAACTATGCTTTGTCTTCCCGGTATTATAATTTC | + |
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Preference number: 5 (lower is better) Translates to: YAMDTLPSDVEIDTF*SVRNYALSSRYYNF Trigger: GAAATTATAATACCGGGAAGACAAAGCATAGTTCCGAACAGATCAAAATGTATCTATTTCCACATCGCTGGGCAGTGTATCCATGGCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189547.2 |
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| CDS-3UTR CAA 90 bp | CTTAGAACTCAGAACTTCACAGATTCTCCAGTCCCAATGAAGAAATCATTTAGATCCTTTTTGGGAGCTTaGCGAACTTCTTCTTGGCAA | + |
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Preference number: 5 (lower is better) Translates to: LRTQNFTDSPVPMKKSFRSFLGA*RTSSWQ Trigger: TTGCCAAGAAGAAGTTCGCAAAGCTCCCAAAAAGGA...TCTAAATGATTTCTTCATTGGGACTGGAGAATCTGTGAAGTTCTGAGTTCTAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| CDS-3UTR CAA 90 bp | CCCCTCAATAAAACTAAGAAAGTGCTAATCCTTAGTGAGGTAACCCAATCACAAAAGCCATCAATGTTGTaGAAACGCTGTACAAAAGGC | + |
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Preference number: 5 (lower is better) Translates to: PLNKTKKVLILSEVTQSQKPSML*KRCTKG Trigger: GCCTTTTGTACAGCGTTTCAACAACATTGATGGCTT...TTGTGATTGGGTTACCTCACTAAGGATTAGCACTTTCTTAGTTTTATTGAGGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000027569.14 |
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| CDS-3UTR CAA 90 bp | CTTAGAACTCAGAACTTCACAGATTCTCCAGTCCCAATGAAGAAATCATTTAGATGCCAAGGATATAAATaGGCATCCCTGCTATGCCAT | + |
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Preference number: 5 (lower is better) Translates to: LRTQNFTDSPVPMKKSFRCQGYK*ASLLCH Trigger: ATGGCATAGCAGGGATGCCAATTTATATCCTTGGCA...TCTAAATGATTTCTTCATTGGGACTGGAGAATCTGTGAAGTTCTGAGTTCTAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| CDS TCA 90 bp | TTAAGACAGTCGCTGTCACATGTTCCAGCAATAGCATCAATAAATTaGCCTTCATCATCTGAAGCTGCCAATCCTTCTTTAATGCAAGAA | + |
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Preference number: 5 (lower is better) Translates to: LRQSLSHVPAIASIN*PSSSEAANPSLMQE Trigger: TTCTTGCATTAAAGAAGGATTGGCAGCTTCAGATGATGAAGGTCAATTTATTGATGCTATTGCTGGAACATGTGACAGCGACTGTCTTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| CDS-3UTR CAA 90 bp | CCCCTCAATAAAACTAAGAAAGTGCTAATCCTTAGTGAGGTAACCCAATCACAACAGATTCACTTTTGTTaGTATCTTCCTTCGCTACCA | + |
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Preference number: 5 (lower is better) Translates to: PLNKTKKVLILSEVTQSQQIHFC*YLPSLP Trigger: TGGTAGCGAAGGAAGATACAAACAAAAGTGAATCTG...TTGTGATTGGGTTACCTCACTAAGGATTAGCACTTTCTTAGTTTTATTGAGGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027569.14 |
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| CDS-3UTR CAA 90 bp | CTTAGAACTCAGAACTTCACAGATTCTCCAGTCCCAATGAAGAAATCATTTAGAAAGCCATCAATGTTGTaGAAACGCTGTACAAAAGGC | + |
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Preference number: 5 (lower is better) Translates to: LRTQNFTDSPVPMKKSFRKPSML*KRCTKG Trigger: GCCTTTTGTACAGCGTTTCAACAACATTGATGGCTT...TCTAAATGATTTCTTCATTGGGACTGGAGAATCTGTGAAGTTCTGAGTTCTAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| CDS-3UTR CAA 90 bp | CCCCTCAATAAAACTAAGAAAGTGCTAATCCTTAGTGAGGTAACCCAATCACAAACCACCATAGCCTTTTaGTCATCTGACTTTTTATTG | + |
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Preference number: 5 (lower is better) Translates to: PLNKTKKVLILSEVTQSQTTIAF*SSDFLL Trigger: CAATAAAAAGTCAGATGACAAAAAGGCTATGGTGGT...TTGTGATTGGGTTACCTCACTAAGGATTAGCACTTTCTTAGTTTTATTGAGGGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000027569.14 |
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| CDS-3UTR CAA 90 bp | CTTAGAACTCAGAACTTCACAGATTCTCCAGTCCCAATGAAGAAATCATTTAGACAGATTCACTTTTGTTaGTATCTTCCTTCGCTACCA | + |
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Preference number: 5 (lower is better) Translates to: LRTQNFTDSPVPMKKSFRQIHFC*YLPSLP Trigger: TGGTAGCGAAGGAAGATACAAACAAAAGTGAATCTG...TCTAAATGATTTCTTCATTGGGACTGGAGAATCTGTGAAGTTCTGAGTTCTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| CDS-3UTR CAA 90 bp | CCCCTCAATAAAACTAAGAAAGTGCTAATCCTTAGTGAGGTAACCCAATCACAAACTTCTTCTTGGCAATaGGTATTGTTTTCAGATACG | + |
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Preference number: 5 (lower is better) Translates to: PLNKTKKVLILSEVTQSQTSSWQ*VLFSDT Trigger: CGTATCTGAAAACAATACCAATTGCCAAGAAGAAGT...TTGTGATTGGGTTACCTCACTAAGGATTAGCACTTTCTTAGTTTTATTGAGGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027569.14 |
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| CDS-3UTR CAA 90 bp | CCCCTCAATAAAACTAAGAAAGTGCTAATCCTTAGTGAGGTAACCCAATCACAATTTGCGAACTTCTTCTaGGCAATTGGTATTGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: PLNKTKKVLILSEVTQSQFANFF*AIGIVF Trigger: GAAAACAATACCAATTGCCAAGAAGAAGTTCGCAAA...TTGTGATTGGGTTACCTCACTAAGGATTAGCACTTTCTTAGTTTTATTGAGGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027569.14 |
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| CDS-3UTR CAA 90 bp | CCCCTCAATAAAACTAAGAAAGTGCTAATCCTTAGTGAGGTAACCCAATCACAAGGAAATAGATACATTTaGATCTGTTCGGAACTGAGT | + |
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Preference number: 5 (lower is better) Translates to: PLNKTKKVLILSEVTQSQGNRYI*ICSELS Trigger: ACTCAGTTCCGAACAGATCAAAATGTATCTATTTCC...TTGTGATTGGGTTACCTCACTAAGGATTAGCACTTTCTTAGTTTTATTGAGGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027569.14 |
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| CDS-3UTR CAA 90 bp | CTTAGAACTCAGAACTTCACAGATTCTCCAGTCCCAATGAAGAAATCATTTAGATCTTTTACAGTGGTTTaGCTCTCAGTGATTTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LRTQNFTDSPVPMKKSFRSFTVV*LSVISP Trigger: TGGAGAAATCACTGAGAGCAAAACCACTGTAAAAGA...TCTAAATGATTTCTTCATTGGGACTGGAGAATCTGTGAAGTTCTGAGTTCTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| CDS TCA 90 bp | GTCACATGTTCCAGCAATAGCATCAATAAATTGACCTTCATCATCTaGAGCTGCCAATCCTTCTTTAATGCAAGAACAATTGTAGTATGT | + |
|
Preference number: 5 (lower is better) Translates to: VTCSSNSINKLTFII*SCQSFFNARTIVVC Trigger: ACATACTACAATTGTTCTTGCATTAAAGAAGGATTGGCAGCTTCAGATGATGAAGGTCAATTTATTGATGCTATTGCTGGAACATGTGAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| CDS-3UTR CAA 90 bp | CTTAGAACTCAGAACTTCACAGATTCTCCAGTCCCAATGAAGAAATCATTTAGAACCACCATAGCCTTTTaGTCATCTGACTTTTTATTG | + |
|
Preference number: 5 (lower is better) Translates to: LRTQNFTDSPVPMKKSFRTTIAF*SSDFLL Trigger: CAATAAAAAGTCAGATGACAAAAAGGCTATGGTGGT...TCTAAATGATTTCTTCATTGGGACTGGAGAATCTGTGAAGTTCTGAGTTCTAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| CDS-3UTR CAA 90 bp | CTTAGAACTCAGAACTTCACAGATTCTCCAGTCCCAATGAAGAAATCATTTAGATTTGCGAACTTCTTCTaGGCAATTGGTATTGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LRTQNFTDSPVPMKKSFRFANFF*AIGIVF Trigger: GAAAACAATACCAATTGCCAAGAAGAAGTTCGCAAA...TCTAAATGATTTCTTCATTGGGACTGGAGAATCTGTGAAGTTCTGAGTTCTAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| CDS-3UTR CAA 90 bp | CTTAGAACTCAGAACTTCACAGATTCTCCAGTCCCAATGAAGAAATCATTTAGAGGAAATAGATACATTTaGATCTGTTCGGAACTATGC | + |
|
Preference number: 5 (lower is better) Translates to: LRTQNFTDSPVPMKKSFRGNRYI*ICSELC Trigger: GCATAGTTCCGAACAGATCAAAATGTATCTATTTCC...TCTAAATGATTTCTTCATTGGGACTGGAGAATCTGTGAAGTTCTGAGTTCTAAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189547.2 |
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| CDS CAA 72 bp | GGCAAAACTATAGGGCCCAAACCAAGTGGCCCCTCCTaGGAAGCACTGTATCTTGGATCTATTAACAACAGT | + |
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Preference number: 6 (lower is better) Translates to: GKTIGPKPSGPS*EALYLGSINNS Trigger: ACTGTTGTTAATAGATCCAAGATACAGTGCTTCCAAGGAGGGGCCACTTGGTTTGGGCCCTATAGTTTTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| CDS GCA 72 bp | AGGTTATGCCAAGGATATAAATTGGCATCCCTGCTATaGCATGGATACACTGCCCAGCGATGTGGAAATAGA | + |
|
Preference number: 6 (lower is better) Translates to: RLCQGYKLASLL*HGYTAQRCGNR Trigger: TCTATTTCCACATCGCTGGGCAGTGTATCCATGGCATAGCAGGGATGCCAATTTATATCCTTGGCATAACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| CDS GCA 72 bp | AATGAAGGTTATGCCAAGGATATAAATTGGCATCCCTaGTATGCCATGGATACACTGCCCAGCGATGTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: NEGYAKDINWHP*YAMDTLPSDVE Trigger: TTCCACATCGCTGGGCAGTGTATCCATGGCATAGCAGGGATGCCAATTTATATCCTTGGCATAACCTTCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| CDS TCA 72 bp | AAATTTCACAATGGCGTAGGTCACACCCAGGCTAAGTaGAGTGAAGTTGGCAGGTACACTTTGGAGGATAAT | + |
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Preference number: 6 (lower is better) Translates to: KFHNGVGHTQAK*SEVGRYTLEDN Trigger: ATTATCCTCCAAAGTGTACCTGCCAACTTCACTTCACTTAGCCTGGGTGTGACCTACGCCATTGTGAAATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| CDS CCA 72 bp | CAACAGTTCGGCACTTGTAGGAGACTTCTTCCTTTTTaGGAGCTTTGCGAACTTCTTCTTGGCAATTGGTAT | + |
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Preference number: 6 (lower is better) Translates to: QQFGTCRRLLPF*ELCELLLGNWY Trigger: ATACCAATTGCCAAGAAGAAGTTCGCAAAGCTCCCAAAAAGGAAGAAGTCTCCTACAAGTGCCGAACTGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| CDS CCA 72 bp | CCCAGGCTAAGTGAAGTGAAGTTGGCAGGTACACTTTaGAGGATAATTGAGATGACAGGTATACTGCACATA | + |
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Preference number: 6 (lower is better) Translates to: PRLSEVKLAGTL*RIIEMTGILHI Trigger: TATGTGCAGTATACCTGTCATCTCAATTATCCTCCAAAGTGTACCTGCCAACTTCACTTCACTTAGCCTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| CDS CAA 72 bp | GGATACACTGCCCAGCGATGTGGAAATAGATACATTTaGATCTGTTCGGAACTATGCTTTGTCTTCCCGGTA | + |
|
Preference number: 6 (lower is better) Translates to: GYTAQRCGNRYI*ICSELCFVFPV Trigger: TACCGGGAAGACAAAGCATAGTTCCGAACAGATCAAAATGTATCTATTTCCACATCGCTGGGCAGTGTATCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189547.2 |
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| CDS TCA 72 bp | AGAAGCCGCATGAACTTGTGGGAATGTGGTCAAAAATaGAGGTTATGCCAAGGATATAAATTGGCATCCCTG | + |
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Preference number: 6 (lower is better) Translates to: RSRMNLWECGQK*RLCQGYKLASL Trigger: CAGGGATGCCAATTTATATCCTTGGCATAACCTTCATTTTTGACCACATTCCCACAAGTTCATGCGGCTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| CDS TCA 72 bp | ACATCTATTATTGTCCCAGTATATACAAGCTATAGCTaGCGACAGTCGAAACAAGAGTGGTGCAGGGACAGA | + |
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Preference number: 6 (lower is better) Translates to: TSIIVPVYTSYS*RQSKQEWCRDR Trigger: TCTGTCCCTGCACCACTCTTGTTTCGACTGTCGTCAGCTATAGCTTGTATATACTGGGACAATAATAGATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| CDS TCA 72 bp | GATACACTGCCCAGCGATGTGGAAATAGATACATTTTaGTCTGTTCGGAACTATGCTTTGTCTTCCCGGTAT | + |
|
Preference number: 6 (lower is better) Translates to: DTLPSDVEIDTF*SVRNYALSSRY Trigger: ATACCGGGAAGACAAAGCATAGTTCCGAACAGATCAAAATGTATCTATTTCCACATCGCTGGGCAGTGTATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189547.2 |
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| CDS GCA 72 bp | GGCACTTGTAGGAGACTTCTTCCTTTTTGGGAGCTTTaGGAACTTCTTCTTGGCAATTGGTATTGTTTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: GTCRRLLPFWEL*ELLLGNWYCFQ Trigger: CTGAAAACAATACCAATTGCCAAGAAGAAGTTCGCAAAGCTCCCAAAAAGGAAGAAGTCTCCTACAAGTGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| CDS TCA 72 bp | AAGTGGTGCAATCACAATACTCATTGCAGTCAGCTGTaGGGTTTCCAAGTTGACCATAGCCATCATAATCTT | + |
|
Preference number: 6 (lower is better) Translates to: KWCNHNTHCSQL*GFQVDHSHHNL Trigger: AAGATTATGATGGCTATGGTCAACTTGGAAACCTCACAGCTGACTGCAATGAGTATTGTGATTGCACCACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| CDS CCA 72 bp | ATTTCCAACCTGTCAACAATTAAACCGCCAAGAAAATaGCCAATTATGCCTCCAGGAAGTACAAATGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: ISNLSTIKPPRK*PIMPPGSTNAP Trigger: AGGAGCATTTGTACTTCCTGGAGGCATAATTGGCCATTTTCTTGGCGGTTTAATTGTTGACAGGTTGGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| CDS CAA 72 bp | ACAATACTCATTGCAGTCAGCTGTGAGGTTTCCAAGTaGACCATAGCCATCATAATCTTCATTGATTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: TILIAVSCEVSK*TIAIIIFIDSS Trigger: GCTGGAATCAATGAAGATTATGATGGCTATGGTCAACTTGGAAACCTCACAGCTGACTGCAATGAGTATTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| CDS CAA 90 bp | GGTGCAATCACAATACTCATTGCAGTCAGCTGTGAGGTTTCCAAGTaGACCATAGCCATCATAATCTTCATTGATTCCAGCAAATGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: GAITILIAVSCEVSK*TIAIIIFIDSSKCC Trigger: ACAACATTTGCTGGAATCAATGAAGATTATGATGGCTATGGTCAACTTGGAAACCTCACAGCTGACTGCAATGAGTATTGTGATTGCACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| CDS GCA 72 bp | GAAAAGCAAATAACATCGATTCAAGTCCCATTAAAATaGAGGAAGCTGCAATCCATCTTGTCCTGTTCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: EKQITSIQVPLK*RKLQSILSCSL Trigger: AAGGGAACAGGACAAGATGGATTGCAGCTTCCTGCATTTTAATGGGACTTGAATCGATGTTATTTGCTTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| CDS CCA 72 bp | TTAAAAGTCAAATACTCTGAGACTTTGCAGATTGCCTaGGTCAGCATCAGTGGGTTCTTCAAAATATGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: LKVKYSETLQIA*VSISGFFKICQ Trigger: TTGGCATATTTTGAAGAACCCACTGATGCTGACCCAGGCAATCTGCAAAGTCTCAGAGTATTTGACTTTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| CDS CAA 72 bp | TATAAAGATGTATTAAAAGTCAAATACTCTGAGACTTaGCAGATTGCCTGGGTCAGCATCAGTGGGTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: YKDVLKVKYSET*QIAWVSISGFF Trigger: GAAGAACCCACTGATGCTGACCCAGGCAATCTGCAAAGTCTCAGAGTATTTGACTTTTAATACATCTTTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| CDS CAA 90 bp | CTATGCCATGGATACACTGCCCAGCGATGTGGAAATAGATACATTTaGATCTGTTCGGAACTGAGTTTCCACAAATTATATTTCTCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: LCHGYTAQRCGNRYI*ICSELSFHKLYFSF Trigger: AAAAGAGAAATATAATTTGTGGAAACTCAGTTCCGAACAGATCAAAATGTATCTATTTCCACATCGCTGGGCAGTGTATCCATGGCATAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027569.14 |
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| CDS CAA 90 bp | AAAAGCCCAACTGATACAACAGTTGTCACTAATGTAAATTTCAGCTaGTTCTTATTAGTCATTTCCAACCTGTCAACAATTAAACCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: KSPTDTTVVTNVNFS*FLLVISNLSTIKPP Trigger: TGGCGGTTTAATTGTTGACAGGTTGGAAATGACTAATAAGAACAAGCTGAAATTTACATTAGTGACAACTGTTGTATCAGTTGGGCTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| CDS TCA 72 bp | TCCAGCAATAGCATCAATAAATTGACCTTCATCATCTaGAGCTGCCAATCCTTCTTTAATGCAAGAACAATT | + |
|
Preference number: 6 (lower is better) Translates to: SSNSINKLTFII*SCQSFFNARTI Trigger: AATTGTTCTTGCATTAAAGAAGGATTGGCAGCTTCAGATGATGAAGGTCAATTTATTGATGCTATTGCTGGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| CDS GCA 72 bp | CCTGTTCCCTTTACTTCCAAAGTGTGCTATAATTATTaGTACGACAAAAGACGCAATATAATCACTGAAATC | + |
|
Preference number: 6 (lower is better) Translates to: PVPFTSKVCYNY*YDKRRNIITEI Trigger: GATTTCAGTGATTATATTGCGTCTTTTGTCGTAGCAATAATTATAGCACACTTTGGAAGTAAAGGGAACAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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| CDS GCA 72 bp | AATCCATCTTGTCCTGTTCCCTTTACTTCCAAAGTGTaGTATAATTATTGCTACGACAAAAGACGCAATATA | + |
|
Preference number: 6 (lower is better) Translates to: NPSCPVPFTSKV*YNYCYDKRRNI Trigger: TATATTGCGTCTTTTGTCGTAGCAATAATTATAGCACACTTTGGAAGTAAAGGGAACAGGACAAGATGGATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027569.14 ENSMUST00000189547.2 |
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