Pregenerated sensors for SLCO1C1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030235Ensembl transcript IDs: ENSMUST00000032362.12, ENSMUST00000135562.8, ENSMUST00000203140.2, ENSMUST00000204998.3, ENSMUST00000205214.3
Found 219 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGCCCAGGAGCGTGGTTAATCCCAGGTATATGTGTCTGAAAGCGTaGGAGTCATACAGCCTGCAGGAGCCTCTGCTTCCACATTTCTTA | + |
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Preference number: 1 (lower is better) Translates to: VPRSVVNPRYMCLKA*ESYSLQEPLLPHFL Trigger: TAAGAAATGTGGAAGCAGAGGCTCCTGCAGGCTGTATGACTCCCACGCTTTCAGACACATATACCTGGGATTAACCACGCTCCTGGGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135562.8 |
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| 3UTR GCA 90 bp | GAAACATTTGGGAACATCCATTATCTTTCTGACACCTGCCCATCATaGCTGACCAGTTTCCTGACTTGGGGGCTGCAAATCCCACACAAG | + |
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Preference number: 1 (lower is better) Translates to: ETFGNIHYLSDTCPS*LTSFLTWGLQIPHK Trigger: CTTGTGTGGGATTTGCAGCCCCCAAGTCAGGAAACTGGTCAGGCATGATGGGCAGGTGTCAGAAAGATAATGGATGTTCCCAAATGTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000135562.8 ENSMUST00000204998.3 |
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| 3UTR CCA 90 bp | CTCGGAGAAGATTTCCCAGGAAGACATAAACCCACATGGAGGAGCTaGAATCCCCTACACATTCGTGACTTATTTTGTTCTGTGATTTCC | + |
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Preference number: 1 (lower is better) Translates to: LGEDFPGRHKPTWRS*NPLHIRDLFCSVIS Trigger: GGAAATCACAGAACAAAATAAGTCACGAATGTGTAGGGGATTCCAGCTCCTCCATGTGGGTTTATGTCTTCCTGGGAAATCTTCTCCGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204998.3 |
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| 3UTR CCA 90 bp | ATGAACTTGGATTTCTCAGATGTGGAGCCAGAGTTCTCTCTACTTTaGGATCTTGGTAGAGTCTTGGGTAAGCACCAGAAAGGAACAGCT | + |
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Preference number: 1 (lower is better) Translates to: MNLDFSDVEPEFSLL*DLGRVLGKHQKGTA Trigger: AGCTGTTCCTTTCTGGTGCTTACCCAAGACTCTACCAAGATCCCAAAGTAGAGAGAACTCTGGCTCCACATCTGAGAAATCCAAGTTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204998.3 |
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| 3UTR CCA 90 bp | CTCATAAACATGGAAAGTACACAGGGAATTTTAAGCTTCAGGATGTaGCAGAAAATGAGCTGTAGGAGCACAGAGCTACATGAGTGTGCT | + |
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Preference number: 1 (lower is better) Translates to: LINMESTQGILSFRM*QKMSCRSTELHECA Trigger: AGCACACTCATGTAGCTCTGTGCTCCTACAGCTCATTTTCTGCCACATCCTGAAGCTTAAAATTCCCTGTGTACTTTCCATGTTTATGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204998.3 |
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| 3UTR GCA 90 bp | GGAATGTTGATGAGCCCAATGACAAAGTTGGCTTTGGAAGAAGACTaGCCATACTGCTGCTCAATGTATTTTGGTTTATATGTGACCATG | + |
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Preference number: 1 (lower is better) Translates to: GMLMSPMTKLALEED*PYCCSMYFGLYVTM Trigger: CATGGTCACATATAAACCAAAATACATTGAGCAGCAGTATGGGCAGTCTTCTTCCAAAGCCAACTTTGTCATTGGGCTCATCAACATTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204998.3 |
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| 3UTR GCA 90 bp | AGCCCAATGACAAAGTTGGCTTTGGAAGAAGACTGCCCATACTGCTaGTCAATGTATTTTGGTTTATATGTGACCATGCCAAATAGAGAA | + |
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Preference number: 1 (lower is better) Translates to: SPMTKLALEEDCPYC*SMYFGLYVTMPNRE Trigger: TTCTCTATTTGGCATGGTCACATATAAACCAAAATACATTGAGCAGCAGTATGGGCAGTCTTCTTCCAAAGCCAACTTTGTCATTGGGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204998.3 |
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| 3UTR GCA 90 bp | ATGAGCCCAATGACAAAGTTGGCTTTGGAAGAAGACTGCCCATACTaGTGCTCAATGTATTTTGGTTTATATGTGACCATGCCAAATAGA | + |
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Preference number: 1 (lower is better) Translates to: MSPMTKLALEEDCPY*CSMYFGLYVTMPNR Trigger: TCTATTTGGCATGGTCACATATAAACCAAAATACATTGAGCAGCAGTATGGGCAGTCTTCTTCCAAAGCCAACTTTGTCATTGGGCTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204998.3 |
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| 3UTR TCA 90 bp | AAAGCAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTaGAGCCCTTTTGATTATGCTTTTATTCATTTACATGTATTGGAT | + |
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Preference number: 1 (lower is better) Translates to: KAKQAYLWKQKGIAH*SPFDYAFIHLHVLD Trigger: ATCCAATACATGTAAATGAATAAAAGCATAATCAAAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTGCTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000203140.2 ENSMUST00000204998.3 ENSMUST00000205214.3 |
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| 3UTR-3UTR GCA 90 bp | TGCTTAGGAAGACAGACACCGTGCCCAGGAGCGTGGTTAATCCCAGGTATATGTGGGAGTCATACAGCCTaGAGGAGCCTCTGCTTCCAC | + |
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Preference number: 2 (lower is better) Translates to: CLGRQTPCPGAWLIPGICGSHTA*RSLCFH Trigger: GTGGAAGCAGAGGCTCCTGCAGGCTGTATGACTCCC...ACATATACCTGGGATTAACCACGCTCCTGGGCACGGTGTCTGTCTTCCTAAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135562.8 ENSMUST00000204998.3 |
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| 3UTR-3UTR GCA 90 bp | TTTTTAAAGTCGTGTCTCCTTGCCTGGCCAGTACTTGGGCTGCAATCCACGATCGGGAGTCATACAGCCTaGAGGAGCCTCTGCTTCCAC | + |
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Preference number: 2 (lower is better) Translates to: FLKSCLLAWPVLGLQSTIGSHTA*RSLCFH Trigger: GTGGAAGCAGAGGCTCCTGCAGGCTGTATGACTCCC...GATCGTGGATTGCAGCCCAAGTACTGGCCAGGCAAGGAGACACGACTTTAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000135562.8 ENSMUST00000204998.3 |
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| 3UTR-3UTR CCA 90 bp | CCATCATGCCTGACCAGTTTCCTGACTTGGGGGCTGCAAATCCCACACAAGTGCAAAGTACACAGGGGCTaGGATTCCTGCAAGAACTCT | + |
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Preference number: 2 (lower is better) Translates to: PSCLTSFLTWGLQIPHKCKVHRG*DSCKNS Trigger: AGAGTTCTTGCAGGAATCCCAGCCCCTGTGTACTTT...GCACTTGTGTGGGATTTGCAGCCCCCAAGTCAGGAAACTGGTCAGGCATGATGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000135562.8 ENSMUST00000204998.3 |
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| 3UTR-3UTR CCA 90 bp | CAGAAAATGAGCTGTAGGAGCACAGAGCTACATGAGTGTGCTTGGCACTGTACCACCAGTTTCCTGACTTaGGGGCTGCAAATCCCACAC | + |
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Preference number: 2 (lower is better) Translates to: QKMSCRSTELHECAWHCTTSFLT*GLQIPH Trigger: GTGTGGGATTTGCAGCCCCCAAGTCAGGAAACTGGT...GGTACAGTGCCAAGCACACTCATGTAGCTCTGTGCTCCTACAGCTCATTTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204998.3 |
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| 3UTR-3UTR TCA 90 bp | GTCAAAAGCAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCTCCGGCTGGAGGATTaGCAGCCAGCAAGACAAGCC | + |
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Preference number: 2 (lower is better) Translates to: VKSKAGIPLEAERNCTLKLRLED*QPARQA Trigger: GGCTTGTCTTGCTGGCTGTCAATCCTCCAGCCGGAG...CTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTGCTTTTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135562.8 ENSMUST00000204998.3 |
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| 3UTR-3UTR CCA 90 bp | CCACGATCCCTTGCAGCGCATGTCTCCTTTTTGATGCTTGAAGACATCCCTATTACCAGTTTCCTGACTTaGGGGCTGCAAATCCCACAC | + |
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Preference number: 2 (lower is better) Translates to: PRSLAAHVSFLMLEDIPITSFLT*GLQIPH Trigger: GTGTGGGATTTGCAGCCCCCAAGTCAGGAAACTGGT...AATAGGGATGTCTTCAAGCATCAAAAAGGAGACATGCGCTGCAAGGGATCGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000135562.8 ENSMUST00000204998.3 |
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| 3UTR-3UTR CCA 90 bp | CAAAAAGTACAGCCATGCTTAGGAAGACAGACACCGTGCCCAGGAGCGTGGTTAAAGCAGGCATACCTTTaGAAGCAGAAAGGAATTGCA | + |
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Preference number: 2 (lower is better) Translates to: QKVQPCLGRQTPCPGAWLKQAYL*KQKGIA Trigger: TGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTT...TAACCACGCTCCTGGGCACGGTGTCTGTCTTCCTAAGCATGGCTGTACTTTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000135562.8 ENSMUST00000203140.2 ENSMUST00000204998.3 |
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| 3UTR-3UTR TCA 90 bp | TGCTTAGGAAGACAGACACCGTGCCCAGGAGCGTGGTTAATCCCAGGTATATGTTCCCCTACACATTCGTaGCTTATTTTGTTCTGTGAT | + |
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Preference number: 2 (lower is better) Translates to: CLGRQTPCPGAWLIPGICSPTHS*LILFCD Trigger: ATCACAGAACAAAATAAGTCACGAATGTGTAGGGGA...ACATATACCTGGGATTAACCACGCTCCTGGGCACGGTGTCTGTCTTCCTAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204998.3 |
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| 3UTR-3UTR GCA 90 bp | CCACGATCCCTTGCAGCGCATGTCTCCTTTTTGATGCTTGAAGACATCCCTATTCAAAAAGTACAGCCATaGTTAGGAAGACAGACACCG | + |
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Preference number: 2 (lower is better) Translates to: PRSLAAHVSFLMLEDIPIQKVQP*LGRQTP Trigger: CGGTGTCTGTCTTCCTAAGCATGGCTGTACTTTTTG...AATAGGGATGTCTTCAAGCATCAAAAAGGAGACATGCGCTGCAAGGGATCGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000135562.8 ENSMUST00000203140.2 ENSMUST00000204998.3 |
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| 3UTR-3UTR GCA 90 bp | CAGAAAATGAGCTGTAGGAGCACAGAGCTACATGAGTGTGCTTGGCACTGTACCGAAGACTGCCCATACTaGTGCTCAATGTATTTTGGT | + |
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Preference number: 2 (lower is better) Translates to: QKMSCRSTELHECAWHCTEDCPY*CSMYFG Trigger: ACCAAAATACATTGAGCAGCAGTATGGGCAGTCTTC...GGTACAGTGCCAAGCACACTCATGTAGCTCTGTGCTCCTACAGCTCATTTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204998.3 |
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| 3UTR-3UTR GCA 90 bp | TGCTTAGGAAGACAGACACCGTGCCCAGGAGCGTGGTTAATCCCAGGTATATGTAGGTTTGTCATGTTATaGTTAGAGTCAAAAGCAAAG | + |
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Preference number: 2 (lower is better) Translates to: CLGRQTPCPGAWLIPGICRFVML*LESKAK Trigger: CTTTGCTTTTGACTCTAAGCATAACATGACAAACCT...ACATATACCTGGGATTAACCACGCTCCTGGGCACGGTGTCTGTCTTCCTAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000135562.8 ENSMUST00000203140.2 ENSMUST00000204998.3 |
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| 3UTR-3UTR GCA 90 bp | GGCTGCAAATCCCACACAAGTGCAGTTAGAAAATATAATGTTCTTTCCACTCCGTATCTTTCTGACACCTaGCCATCATGCCTGACCAGT | + |
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Preference number: 2 (lower is better) Translates to: GCKSHTSAVRKYNVLSTPYLSDT*PSCLTS Trigger: ACTGGTCAGGCATGATGGGCAGGTGTCAGAAAGATA...CGGAGTGGAAAGAACATTATATTTTCTAACTGCACTTGTGTGGGATTTGCAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135562.8 ENSMUST00000204998.3 |
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| 3UTR-3UTR GCA 90 bp | GTCAAAAGCAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGAATGGGTCCTATAATTaGCACTGTCTGCACACACCC | + |
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Preference number: 2 (lower is better) Translates to: VKSKAGIPLEAERNCTLKNGSYN*HCLHTP Trigger: GGGTGTGTGCAGACAGTGGCAATTATAGGACCCATT...CTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTGCTTTTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204998.3 |
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| 3UTR-3UTR CCA 90 bp | GTCAAAAGCAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGAAAGTACACAGGGGCTaGGATTCCTGCAAGAACTCT | + |
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Preference number: 2 (lower is better) Translates to: VKSKAGIPLEAERNCTLKKVHRG*DSCKNS Trigger: AGAGTTCTTGCAGGAATCCCAGCCCCTGTGTACTTT...CTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTGCTTTTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135562.8 ENSMUST00000204998.3 |
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| 3UTR-3UTR CCA 90 bp | GTCAAAAGCAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGAGACATAAACCCACATaGAGGAGCTGGAATCCCCTA | + |
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Preference number: 2 (lower is better) Translates to: VKSKAGIPLEAERNCTLKRHKPT*RSWNPL Trigger: TAGGGGATTCCAGCTCCTCCATGTGGGTTTATGTCT...CTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTGCTTTTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204998.3 |
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| 3UTR-3UTR CCA 90 bp | CATAATGAGCCCAAAAGGAAGCCAAAAATGGGTCCTATAATTGCCACTGTCTGCCAGCATTGTCTTCACTaGCAAAGTCATCCAGATAGG | + |
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Preference number: 2 (lower is better) Translates to: HNEPKRKPKMGPIIATVCQHCLH*QSHPDR Trigger: CCTATCTGGATGACTTTGCCAGTGAAGACAATGCTG...GCAGACAGTGGCAATTATAGGACCCATTTTTGGCTTCCTTTTGGGCTCATTATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204998.3 |
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| 3UTR-3UTR CCA 90 bp | AGCAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTAAGCAGGCATACCTTTaGAAGCAGAAAGGAATTGCA | + |
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Preference number: 2 (lower is better) Translates to: SKAGIPLEAERNCTLKPFKQAYL*KQKGIA Trigger: TGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTT...AAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000203140.2 ENSMUST00000204998.3 ENSMUST00000205214.3 |
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| 3UTR-3UTR CCA 90 bp | CAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTTGAAGCAGGCATACCTTTaGAAGCAGAAAGGAATTGCA | + |
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Preference number: 2 (lower is better) Translates to: QSRHTFGSRKELHIEALLKQAYL*KQKGIA Trigger: TGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTT...CAAAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000203140.2 ENSMUST00000204998.3 ENSMUST00000205214.3 |
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| 3UTR-3UTR CCA 90 bp | CTTGGGGGCTGCAAATCCCACACAAGTGCAGTTAGAAAATATAATGTTCTTTCCGAGTTCTCTCTACTTTaGGATCTTGGTAGAGTCTTG | + |
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Preference number: 2 (lower is better) Translates to: LGGCKSHTSAVRKYNVLSEFSLL*DLGRVL Trigger: CAAGACTCTACCAAGATCCCAAAGTAGAGAGAACTC...GGAAAGAACATTATATTTTCTAACTGCACTTGTGTGGGATTTGCAGCCCCCAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204998.3 |
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| 3UTR-3UTR GCA 90 bp | GTCAAAAGCAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGAGGTTTGTCATGTTATaGTTAGAGTCAAAAGCAAAG | + |
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Preference number: 2 (lower is better) Translates to: VKSKAGIPLEAERNCTLKRFVML*LESKAK Trigger: CTTTGCTTTTGACTCTAAGCATAACATGACAAACCT...CTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTGCTTTTGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000203140.2 ENSMUST00000204998.3 ENSMUST00000205214.3 |
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| 3UTR-3UTR CAA 90 bp | TCTTTCCACTCCGGCTGGAGGATTGACAGCCAGCAAGACAAGCCGACACATAGGTTGCCTGGCCAGTACTaGGGCTGCAATCCACGATCC | + |
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Preference number: 3 (lower is better) Translates to: SFHSGWRIDSQQDKPTHRLPGQY*GCNPRS Trigger: GGATCGTGGATTGCAGCCCAAGTACTGGCCAGGCAA...CCTATGTGTCGGCTTGTCTTGCTGGCTGTCAATCCTCCAGCCGGAGTGGAAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135562.8 ENSMUST00000204998.3 |
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| 3UTR TCA 72 bp | AGCACAGAGCTACATGAGTGTGCTTGGCACTGTACCTaGAAGCGTGGGAGTCATACAGCCTGCAGGAGCCTC | + |
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Preference number: 3 (lower is better) Translates to: STELHECAWHCT*KRGSHTACRSL Trigger: GAGGCTCCTGCAGGCTGTATGACTCCCACGCTTTCAGGTACAGTGCCAAGCACACTCATGTAGCTCTGTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204998.3 |
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| 3UTR GCA 72 bp | TCTGTGATTTCCCCAGGATTGAGCTTGGTGATGGACTaGTGGACTCCAGGTAGCACGGAGAGATGCTGGGAG | + |
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Preference number: 3 (lower is better) Translates to: SVISPGLSLVMD*WTPGSTERCWE Trigger: CTCCCAGCATCTCTCCGTGCTACCTGGAGTCCAGCAGTCCATCACCAAGCTCAATCCTGGGGAAATCACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204998.3 |
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| 3UTR CCA 72 bp | GCACACACCCGATGTAGAAAGCAGCATTGTCTTCACTaGCAAAGTCATCCAGATAGGCGATGCCCAGGGGTT | + |
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Preference number: 3 (lower is better) Translates to: AHTRCRKQHCLH*QSHPDRRCPGV Trigger: AACCCCTGGGCATCGCCTATCTGGATGACTTTGCCAGTGAAGACAATGCTGCTTTCTACATCGGGTGTGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204998.3 |
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| 3UTR-3UTR CAA 90 bp | TATTCCCCCAGAGAATATTCCAAGGGCCACTGCAGGAATGTTGATGAGCCCAATACTCCGGCTGGAGGATaGACAGCCAGCAAGACAAGC | + |
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Preference number: 3 (lower is better) Translates to: YSPREYSKGHCRNVDEPNTPAGG*TASKTS Trigger: GCTTGTCTTGCTGGCTGTCAATCCTCCAGCCGGAGT...ATTGGGCTCATCAACATTCCTGCAGTGGCCCTTGGAATATTCTCTGGGGGAATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204998.3 |
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| 3UTR-3UTR CAA 90 bp | GTACCTGAAAGCGTGGGAGTCATACAGCCTGCAGGAGCCTCTGCTTCCACATTTCTCTACTTTGGGATCTaGGTAGAGTCTTGGGTAAGC | + |
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Preference number: 3 (lower is better) Translates to: VPESVGVIQPAGASASTFLYFGI*VESWVS Trigger: GCTTACCCAAGACTCTACCAAGATCCCAAAGTAGAG...AAATGTGGAAGCAGAGGCTCCTGCAGGCTGTATGACTCCCACGCTTTCAGGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204998.3 |
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| 3UTR TCA 72 bp | GCCACCAGGCCCCGACCCACTGAGGATCCTTTGGGGTaGTTGTTATATGGTCTAGATTCACAAAGCCAATAT | + |
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Preference number: 3 (lower is better) Translates to: ATRPRPTEDPLG*LLYGLDSQSQY Trigger: ATATTGGCTTTGTGAATCTAGACCATATAACAATCACCCCAAAGGATCCTCAGTGGGTCGGGGCCTGGTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204998.3 |
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| 3UTR-3UTR CAA 90 bp | CAAAAAGTACAGCCATGCTTAGGAAGACAGACACCGTGCCCAGGAGCGTGGTTAAAAGCAGGCATACCTTaGGAAGCAGAAAGGAATTGC | + |
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Preference number: 3 (lower is better) Translates to: QKVQPCLGRQTPCPGAWLKAGIP*EAERNC Trigger: GCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTT...TAACCACGCTCCTGGGCACGGTGTCTGTCTTCCTAAGCATGGCTGTACTTTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000135562.8 ENSMUST00000203140.2 ENSMUST00000204998.3 |
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| 3UTR CCA 72 bp | CTCGGAGAAGATTTCCCAGGAAGACATAAACCCACATaGAGGAGCTGGAATCCCCTACACATTCGTGACTTA | + |
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Preference number: 3 (lower is better) Translates to: LGEDFPGRHKPT*RSWNPLHIRDL Trigger: TAAGTCACGAATGTGTAGGGGATTCCAGCTCCTCCATGTGGGTTTATGTCTTCCTGGGAAATCTTCTCCGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204998.3 |
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| 3UTR-3UTR CAA 90 bp | AATCCACGATCCCTTGCAGCGCATGTCTCCTTTTTGATGCTTGAAGACATCCCTAAAGCAGGCATACCTTaGGAAGCAGAAAGGAATTGC | + |
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Preference number: 3 (lower is better) Translates to: NPRSLAAHVSFLMLEDIPKAGIP*EAERNC Trigger: GCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTT...AGGGATGTCTTCAAGCATCAAAAAGGAGACATGCGCTGCAAGGGATCGTGGATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000135562.8 ENSMUST00000203140.2 ENSMUST00000204998.3 |
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| 3UTR-3UTR CAA 90 bp | CCACGATCCCTTGCAGCGCATGTCTCCTTTTTGATGCTTGAAGACATCCCTATTAAAGCAGGCATACCTTaGGAAGCAGAAAGGAATTGC | + |
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Preference number: 3 (lower is better) Translates to: PRSLAAHVSFLMLEDIPIKAGIP*EAERNC Trigger: GCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTT...AATAGGGATGTCTTCAAGCATCAAAAAGGAGACATGCGCTGCAAGGGATCGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000135562.8 ENSMUST00000203140.2 ENSMUST00000204998.3 |
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| 3UTR-3UTR CAA 90 bp | TGCTTAGGAAGACAGACACCGTGCCCAGGAGCGTGGTTAATCCCAGGTATATGTTTCTTAAATCCCCATTaGAGGCATGAAGTGTCAATC | + |
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Preference number: 3 (lower is better) Translates to: CLGRQTPCPGAWLIPGICFLNPH*RHEVSI Trigger: GATTGACACTTCATGCCTCAAATGGGGATTTAAGAA...ACATATACCTGGGATTAACCACGCTCCTGGGCACGGTGTCTGTCTTCCTAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135562.8 ENSMUST00000204998.3 |
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| 3UTR-3UTR CAA 90 bp | GTCAAAAGCAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGGTGATTTCCCCAGGATaGAGCTTGGTGATGGACTGC | + |
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Preference number: 3 (lower is better) Translates to: VKSKAGIPLEAERNCTLKVISPG*SLVMDC Trigger: GCAGTCCATCACCAAGCTCAATCCTGGGGAAATCAC...CTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTGCTTTTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204998.3 |
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| 3UTR GCA 72 bp | CATAACTATTCCCCCAGAGAATATTCCAAGGGCCACTaGAGGAATGTTGATGAGCCCAATGACAAAGTTGGC | + |
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Preference number: 3 (lower is better) Translates to: HNYSPREYSKGH*RNVDEPNDKVG Trigger: GCCAACTTTGTCATTGGGCTCATCAACATTCCTGCAGTGGCCCTTGGAATATTCTCTGGGGGAATAGTTATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204998.3 |
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| 3UTR CCA 72 bp | GATTTCTCAGATGTGGAGCCAGAGTTCTCTCTACTTTaGGATCTTGGTAGAGTCTTGGGTAAGCACCAGAAA | + |
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Preference number: 3 (lower is better) Translates to: DFSDVEPEFSLL*DLGRVLGKHQK Trigger: TTTCTGGTGCTTACCCAAGACTCTACCAAGATCCCAAAGTAGAGAGAACTCTGGCTCCACATCTGAGAAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204998.3 |
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| 3UTR-3UTR CAA 90 bp | AGCAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTAAAGCAGGCATACCTTaGGAAGCAGAAAGGAATTGC | + |
|
Preference number: 3 (lower is better) Translates to: SKAGIPLEAERNCTLKPFKAGIP*EAERNC Trigger: GCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTT...AAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000203140.2 ENSMUST00000204998.3 ENSMUST00000205214.3 |
||
| 3UTR-3UTR CAA 90 bp | TATTCCCCCAGAGAATATTCCAAGGGCCACTGCAGGAATGTTGATGAGCCCAATTTCTTAAATCCCCATTaGAGGCATGAAGTGTCAATC | + |
|
Preference number: 3 (lower is better) Translates to: YSPREYSKGHCRNVDEPNFLNPH*RHEVSI Trigger: GATTGACACTTCATGCCTCAAATGGGGATTTAAGAA...ATTGGGCTCATCAACATTCCTGCAGTGGCCCTTGGAATATTCTCTGGGGGAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204998.3 |
||
| 3UTR CCA 72 bp | ATGGAAAGTACACAGGGAATTTTAAGCTTCAGGATGTaGCAGAAAATGAGCTGTAGGAGCACAGAGCTACAT | + |
|
Preference number: 3 (lower is better) Translates to: MESTQGILSFRM*QKMSCRSTELH Trigger: ATGTAGCTCTGTGCTCCTACAGCTCATTTTCTGCCACATCCTGAAGCTTAAAATTCCCTGTGTACTTTCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204998.3 |
||
| 3UTR-3UTR CAA 90 bp | AGCAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTACTAATGAACAGAAATaGTCTCAGAAGACAACCCCA | + |
|
Preference number: 3 (lower is better) Translates to: SKAGIPLEAERNCTLKPFTNEQK*SQKTTP Trigger: TGGGGTTGTCTTCTGAGACAATTTCTGTTCATTAGT...AAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032362.12 ENSMUST00000203140.2 |
||
| 3UTR GCA 72 bp | ACAAAGTTGGCTTTGGAAGAAGACTGCCCATACTGCTaGTCAATGTATTTTGGTTTATATGTGACCATGCCA | + |
|
Preference number: 3 (lower is better) Translates to: TKLALEEDCPYC*SMYFGLYVTMP Trigger: TGGCATGGTCACATATAAACCAAAATACATTGAGCAGCAGTATGGGCAGTCTTCTTCCAAAGCCAACTTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204998.3 |
||
| 3UTR-3UTR CAA 90 bp | TTTCTGTATCAGTTCAAGGAGGAGCTAAATCTGAAAGATCTCCTTAGGAAATACAAAGCAGGCATACCTTaGGAAGCAGAAAGGAATTGC | + |
|
Preference number: 3 (lower is better) Translates to: FLYQFKEELNLKDLLRKYKAGIP*EAERNC Trigger: GCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTT...GTATTTCCTAAGGAGATCTTTCAGATTTAGCTCCTCCTTGAACTGATACAGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032362.12 ENSMUST00000203140.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCAAAAGCAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGTATCAACATACAGTTTaGCGCATAATGAGCCCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: VKSKAGIPLEAERNCTLKYQHTV*RIMSPK Trigger: TTTTGGGCTCATTATGCGCAAAACTGTATGTTGATA...CTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTGCTTTTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204998.3 |
||
| 3UTR GCA 72 bp | GCTCCCATTTTGAGTCTGAACATTTACATCTTGAGTTaGAATCTGAAAAGAGAGCTCGTTCATGATAAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: APILSLNIYILS*NLKRELVHDKR Trigger: TCTCTTATCATGAACGAGCTCTCTTTTCAGATTGCAACTCAAGATGTAAATGTTCAGACTCAAAATGGGAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204998.3 |
||
| 3UTR TCA 72 bp | CAAAGTAGATTCTGGTCAAGTGACACAATGTACAGATaGCATGTCATAATCAAACATAATAGACAGCCATCC | + |
|
Preference number: 3 (lower is better) Translates to: QSRFWSSDTMYR*HVIIKHNRQPS Trigger: GGATGGCTGTCTATTATGTTTGATTATGACATGTCATCTGTACATTGTGTCACTTGACCAGAATCTACTTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032362.12 ENSMUST00000203140.2 |
||
| 3UTR TCA 72 bp | CAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTaGAGCCCTTTTGATTATGCTTTTATTCATTTACAT | + |
|
Preference number: 3 (lower is better) Translates to: QAYLWKQKGIAH*SPFDYAFIHLH Trigger: ATGTAAATGAATAAAAGCATAATCAAAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000203140.2 ENSMUST00000204998.3 ENSMUST00000205214.3 |
||
| CDS-3UTR TCA 90 bp | GTCGTGTCTCCTTGCCTGGCCAGTACTTGGGCTGCAATCCACGATCCCTTGCAGAGCTGTACTTCTCCATaGAGAACTGGGGTACAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VVSPCLASTWAAIHDPLQSCTSP*RTGVQQ Trigger: TTGCTGTACCCCAGTTCTTCATGGAGAAGTACAGCT...CTGCAAGGGATCGTGGATTGCAGCCCAAGTACTGGCCAGGCAAGGAGACACGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135562.8 ENSMUST00000203140.2 |
||
| CDS-3UTR GCA 90 bp | GTCGTGTCTCCTTGCCTGGCCAGTACTTGGGCTGCAATCCACGATCCCTTGCAGAATGGGTCCTATAATTaGCACTGTCTGCACACACCC | + |
|
Preference number: 4 (lower is better) Translates to: VVSPCLASTWAAIHDPLQNGSYN*HCLHTP Trigger: GGGTGTGTGCAGACAGTGGCAATTATAGGACCCATT...CTGCAAGGGATCGTGGATTGCAGCCCAAGTACTGGCCAGGCAAGGAGACACGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135562.8 ENSMUST00000203140.2 |
||
| CDS-3UTR CCA 90 bp | TGCTTAGGAAGACAGACACCGTGCCCAGGAGCGTGGTTAATCCCAGGTATATGTGAGTTTTCCACAGCATaGCCGCGCTTCCTCTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: CLGRQTPCPGAWLIPGICEFSTA*PRFLCG Trigger: TCCACAGAGGAAGCGCGGCCATGCTGTGGAAAACTC...ACATATACCTGGGATTAACCACGCTCCTGGGCACGGTGTCTGTCTTCCTAAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135562.8 ENSMUST00000204998.3 |
||
| CDS-3UTR TCA 90 bp | CAAAAAGTACAGCCATGCTTAGGAAGACAGACACCGTGCCCAGGAGCGTGGTTAAGCTGTACTTCTCCATaGAGAACTGGGGTACAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QKVQPCLGRQTPCPGAWLSCTSP*RTGVQQ Trigger: TTGCTGTACCCCAGTTCTTCATGGAGAAGTACAGCT...TAACCACGCTCCTGGGCACGGTGTCTGTCTTCCTAAGCATGGCTGTACTTTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000135562.8 ENSMUST00000203140.2 |
||
| CDS-3UTR GCA 90 bp | AGCAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTGGGAGTCATACAGCCTaGAGGAGCCTCTGCTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SKAGIPLEAERNCTLKPFGSHTA*RSLCFH Trigger: GTGGAAGCAGAGGCTCCTGCAGGCTGTATGACTCCC...AAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032362.12 ENSMUST00000203140.2 ENSMUST00000205214.3 |
||
| CDS-3UTR CCA 90 bp | GTCAAAAGCAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGTCCGACTGTAAAGGATaGCCCTCCGGCAGGTTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: VKSKAGIPLEAERNCTLKSDCKG*PSGRLR Trigger: GCGCAACCTGCCGGAGGGCCATCCTTTACAGTCGGA...CTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTGCTTTTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000204998.3 ENSMUST00000205214.3 |
||
| CDS-3UTR CCA 90 bp | CTTAGGAAGACAGACACCGTGCCCAGGAGCGTGGTTAATCCCAGGTATATGTGTAGACATAAACCCACATaGAGGAGCTGGAATCCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: LRKTDTVPRSVVNPRYMCRHKPT*RSWNPL Trigger: TAGGGGATTCCAGCTCCTCCATGTGGGTTTATGTCT...ACACATATACCTGGGATTAACCACGCTCCTGGGCACGGTGTCTGTCTTCCTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135562.8 ENSMUST00000203140.2 |
||
| CDS-3UTR CCA 90 bp | CAAAAAGTACAGCCATGCTTAGGAAGACAGACACCGTGCCCAGGAGCGTGGTTAAGACATAAACCCACATaGAGGAGCTGGAATCCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: QKVQPCLGRQTPCPGAWLRHKPT*RSWNPL Trigger: TAGGGGATTCCAGCTCCTCCATGTGGGTTTATGTCT...TAACCACGCTCCTGGGCACGGTGTCTGTCTTCCTAAGCATGGCTGTACTTTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000135562.8 ENSMUST00000203140.2 |
||
| 3UTR CAA 72 bp | GACTTATTTTGTTCTGTGATTTCCCCAGGATTGAGCTaGGTGATGGACTGCTGGACTCCAGGTAGCACGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DLFCSVISPGLS*VMDCWTPGSTE Trigger: CTCCGTGCTACCTGGAGTCCAGCAGTCCATCACCAAGCTCAATCCTGGGGAAATCACAGAACAAAATAAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204998.3 |
||
| CDS-3UTR TCA 90 bp | TTTTTAAAGTCGTGTCTCCTTGCCTGGCCAGTACTTGGGCTGCAATCCACGATCTCCGGCAGGTTGCGCTaGATTTTTGTGGAACAAATG | + |
|
Preference number: 4 (lower is better) Translates to: FLKSCLLAWPVLGLQSTISGRLR*IFVEQM Trigger: CATTTGTTCCACAAAAATTCAGCGCAACCTGCCGGA...GATCGTGGATTGCAGCCCAAGTACTGGCCAGGCAAGGAGACACGACTTTAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000135562.8 ENSMUST00000204998.3 |
||
| CDS-3UTR TCA 90 bp | TGCTTAGGAAGACAGACACCGTGCCCAGGAGCGTGGTTAATCCCAGGTATATGTTGCCAAATAGAGAATTaGACTGAACGGTGCTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: CLGRQTPCPGAWLIPGICCQIEN*TERCLH Trigger: GTGCAAGCACCGTTCAGTTCAATTCTCTATTTGGCA...ACATATACCTGGGATTAACCACGCTCCTGGGCACGGTGTCTGTCTTCCTAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135562.8 ENSMUST00000203140.2 |
||
| CDS-3UTR GCA 90 bp | TTTTTAAAGTCGTGTCTCCTTGCCTGGCCAGTACTTGGGCTGCAATCCACGATCGCTTTGGAAGAAGACTaGCCATACTGCTGCTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: FLKSCLLAWPVLGLQSTIALEED*PYCCSM Trigger: CATTGAGCAGCAGTATGGGCAGTCTTCTTCCAAAGC...GATCGTGGATTGCAGCCCAAGTACTGGCCAGGCAAGGAGACACGACTTTAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000135562.8 ENSMUST00000203140.2 |
||
| CDS-3UTR GCA 90 bp | GTCAAAAGCAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGGGGAGTCATACAGCCTaGAGGAGCCTCTGCTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VKSKAGIPLEAERNCTLKGSHTA*RSLCFH Trigger: GTGGAAGCAGAGGCTCCTGCAGGCTGTATGACTCCC...CTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTGCTTTTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032362.12 ENSMUST00000203140.2 ENSMUST00000205214.3 |
||
| CDS-3UTR CCA 90 bp | CAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTTGGAGTTTTCCACAGCATaGCCGCGCTTCCTCTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QSRHTFGSRKELHIEALLEFSTA*PRFLCG Trigger: TCCACAGAGGAAGCGCGGCCATGCTGTGGAAAACTC...CAAAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000204998.3 ENSMUST00000205214.3 |
||
| CDS-3UTR CCA 90 bp | TTCTCTCTACTTTGGGATCTTGGTAGAGTCTTGGGTAAGCACCAGAAAGGAACAGAGTTTTCCACAGCATaGCCGCGCTTCCTCTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: FSLLWDLGRVLGKHQKGTEFSTA*PRFLCG Trigger: TCCACAGAGGAAGCGCGGCCATGCTGTGGAAAACTC...TGTTCCTTTCTGGTGCTTACCCAAGACTCTACCAAGATCCCAAAGTAGAGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204998.3 |
||
| CDS-3UTR CCA 90 bp | AGCAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTGAGTTTTCCACAGCATaGCCGCGCTTCCTCTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SKAGIPLEAERNCTLKPFEFSTA*PRFLCG Trigger: TCCACAGAGGAAGCGCGGCCATGCTGTGGAAAACTC...AAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000204998.3 ENSMUST00000205214.3 |
||
| CDS-3UTR CCA 90 bp | TCTTTCCACTCCGGCTGGAGGATTGACAGCCAGCAAGACAAGCCGACACATAGGCTTCTGCCAATGCTTTaGCAAAGTAAACAAACGACA | + |
|
Preference number: 4 (lower is better) Translates to: SFHSGWRIDSQQDKPTHRLLPML*QSKQTT Trigger: TGTCGTTTGTTTACTTTGCCAAAGCATTGGCAGAAG...CCTATGTGTCGGCTTGTCTTGCTGGCTGTCAATCCTCCAGCCGGAGTGGAAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135562.8 |
||
| 3UTR CAA 72 bp | CAGATGTGGAGCCAGAGTTCTCTCTACTTTGGGATCTaGGTAGAGTCTTGGGTAAGCACCAGAAAGGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: QMWSQSSLYFGI*VESWVSTRKEQ Trigger: CTGTTCCTTTCTGGTGCTTACCCAAGACTCTACCAAGATCCCAAAGTAGAGAGAACTCTGGCTCCACATCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204998.3 |
||
| CDS-3UTR TCA 90 bp | CAGTTTCCTGACTTGGGGGCTGCAAATCCCACACAAGTGCAGTTAGAAAATATACACCCAAGAACACCTTaGGTTTTCCACAGCATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QFPDLGAANPTQVQLENIHPRTP*VFHSMA Trigger: GGCCATGCTGTGGAAAACTCAAGGTGTTCTTGGGTG...TATATTTTCTAACTGCACTTGTGTGGGATTTGCAGCCCCCAAGTCAGGAAACTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000135562.8 |
||
| CDS-3UTR TCA 90 bp | AGGAAGACAGACACCGTGCCCAGGAGCGTGGTTAATCCCAGGTATATGTGTCTCTCCCCTACACATTCGTaGCTTATTTTGTTCTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RKTDTVPRSVVNPRYMCLSPTHS*LILFCD Trigger: ATCACAGAACAAAATAAGTCACGAATGTGTAGGGGA...GAGACACATATACCTGGGATTAACCACGCTCCTGGGCACGGTGTCTGTCTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000203140.2 |
||
| CDS-3UTR TCA 90 bp | CAAAAAGTACAGCCATGCTTAGGAAGACAGACACCGTGCCCAGGAGCGTGGTTAGAGGATCCTTTGGGGTaGTTGTTATATGGTCTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: QKVQPCLGRQTPCPGAWLEDPLG*LLYGLD Trigger: ATCTAGACCATATAACAATCACCCCAAAGGATCCTC...TAACCACGCTCCTGGGCACGGTGTCTGTCTTCCTAAGCATGGCTGTACTTTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000135562.8 ENSMUST00000203140.2 |
||
| CDS-3UTR GCA 90 bp | CAAAAAGTACAGCCATGCTTAGGAAGACAGACACCGTGCCCAGGAGCGTGGTTACTTCAGATAGCCTTCTaGCAATGCTTTGGCAAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: QKVQPCLGRQTPCPGAWLLQIAF*QCFGKV Trigger: TACTTTGCCAAAGCATTGGCAGAAGGCTATCTGAAG...TAACCACGCTCCTGGGCACGGTGTCTGTCTTCCTAAGCATGGCTGTACTTTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135562.8 |
||
| CDS-3UTR GCA 90 bp | CCACGATCCCTTGCAGCGCATGTCTCCTTTTTGATGCTTGAAGACATCCCTATTCTATCTGAGTCACGGTaGTCTTCAGATAGCCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PRSLAAHVSFLMLEDIPILSESR*SSDSLL Trigger: CAGAAGGCTATCTGAAGAGCACCGTGACTCAGATAG...AATAGGGATGTCTTCAAGCATCAAAAAGGAGACATGCGCTGCAAGGGATCGTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135562.8 |
||
| CDS-3UTR GCA 90 bp | CAAAAAGTACAGCCATGCTTAGGAAGACAGACACCGTGCCCAGGAGCGTGGTTAATTTTCACATCCCAGTaGAAACAGAGAGAGGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QKVQPCLGRQTPCPGAWLIFTSQ*KQREEE Trigger: CTCTTCCTCTCTCTGTTTGCACTGGGATGTGAAAAT...TAACCACGCTCCTGGGCACGGTGTCTGTCTTCCTAAGCATGGCTGTACTTTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000135562.8 ENSMUST00000203140.2 |
||
| CDS-3UTR CCA 90 bp | CAAAAAGTACAGCCATGCTTAGGAAGACAGACACCGTGCCCAGGAGCGTGGTTAGAGTTCTCTCTACTTTaGGATCTTGGTAGAGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QKVQPCLGRQTPCPGAWLEFSLL*DLGRVL Trigger: CAAGACTCTACCAAGATCCCAAAGTAGAGAGAACTC...TAACCACGCTCCTGGGCACGGTGTCTGTCTTCCTAAGCATGGCTGTACTTTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000135562.8 ENSMUST00000203140.2 |
||
| CDS-3UTR CCA 90 bp | TGCTTAGGAAGACAGACACCGTGCCCAGGAGCGTGGTTAATCCCAGGTATATGTGAGTTCTCTCTACTTTaGGATCTTGGTAGAGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CLGRQTPCPGAWLIPGICEFSLL*DLGRVL Trigger: CAAGACTCTACCAAGATCCCAAAGTAGAGAGAACTC...ACATATACCTGGGATTAACCACGCTCCTGGGCACGGTGTCTGTCTTCCTAAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135562.8 ENSMUST00000203140.2 |
||
| CDS-3UTR CCA 90 bp | CAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTTGCTGTACCTGAAAGCGTaGGAGTCATACAGCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QSRHTFGSRKELHIEALLLYLKA*ESYSLQ Trigger: CTGCAGGCTGTATGACTCCCACGCTTTCAGGTACAG...CAAAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203140.2 |
||
| CDS-3UTR TCA 90 bp | AAATATAATGTTCTTTCCACTCCGGCTGGAGGATTGACAGCCAGCAAGACAAGCTCCGGCAGGTTGCGCTaGATTTTTGTGGAACAAATG | + |
|
Preference number: 4 (lower is better) Translates to: KYNVLSTPAGGLTASKTSSGRLR*IFVEQM Trigger: CATTTGTTCCACAAAAATTCAGCGCAACCTGCCGGA...GCTTGTCTTGCTGGCTGTCAATCCTCCAGCCGGAGTGGAAAGAACATTATATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000135562.8 ENSMUST00000204998.3 |
||
| CDS-3UTR TCA 90 bp | CATGTCATAATCAAACATAATAGACAGCCATCCCCAGGAACACATATCACATATCTCCGGCTGGAGGATTaGCAGCCAGCAAGACAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: HVIIKHNRQPSPGTHITYLRLED*QPARQA Trigger: GGCTTGTCTTGCTGGCTGTCAATCCTCCAGCCGGAG...ATATGTGATATGTGTTCCTGGGGATGGCTGTCTATTATGTTTGATTATGACATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032362.12 ENSMUST00000203140.2 |
||
| CDS-3UTR GCA 90 bp | AGCAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTTATTCCAAGGGCCACTaGAGGAATGTTGATGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SKAGIPLEAERNCTLKPFYSKGH*RNVDEP Trigger: GGGCTCATCAACATTCCTGCAGTGGCCCTTGGAATA...AAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000203140.2 ENSMUST00000205214.3 |
||
| CDS-3UTR GCA 90 bp | AGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTTGATTATGGGCCAGTACTTGGGCTaGAATCCACGATCCCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RHTFGSRKELHIEALLIMGQYLG*NPRSLA Trigger: TGCAAGGGATCGTGGATTGCAGCCCAAGTACTGGCC...CATAATCAAAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032362.12 ENSMUST00000205214.3 |
||
| CDS-3UTR CCA 90 bp | AATCCACGATCCCTTGCAGCGCATGTCTCCTTTTTGATGCTTGAAGACATCCCTCAGCATTGTCTTCACTaGCAAAGTCATCCAGATAGG | + |
|
Preference number: 4 (lower is better) Translates to: NPRSLAAHVSFLMLEDIPQHCLH*QSHPDR Trigger: CCTATCTGGATGACTTTGCCAGTGAAGACAATGCTG...AGGGATGTCTTCAAGCATCAAAAAGGAGACATGCGCTGCAAGGGATCGTGGATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000135562.8 ENSMUST00000203140.2 |
||
| CDS-3UTR TCA 90 bp | CAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTTGAACCTTCTCTCTATCTaGGTCACGGTGCTCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QSRHTFGSRKELHIEALLNLLSI*VTVLFR Trigger: TCTGAAGAGCACCGTGACTCAGATAGAGAGAAGGTT...CAAAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000205214.3 |
||
| CDS-3UTR TCA 90 bp | CCACGATCCCTTGCAGCGCATGTCTCCTTTTTGATGCTTGAAGACATCCCTATTGAGGATCCTTTGGGGTaGTTGTTATATGGTCTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PRSLAAHVSFLMLEDIPIEDPLG*LLYGLD Trigger: ATCTAGACCATATAACAATCACCCCAAAGGATCCTC...AATAGGGATGTCTTCAAGCATCAAAAAGGAGACATGCGCTGCAAGGGATCGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000135562.8 ENSMUST00000203140.2 |
||
| CDS-3UTR GCA 90 bp | CAAAAAGTACAGCCATGCTTAGGAAGACAGACACCGTGCCCAGGAGCGTGGTTAATAGCCTTCTGCCAATaGTTTGGCAAAGTAAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: QKVQPCLGRQTPCPGAWLIAFCQ*FGKVNK Trigger: TTTGTTTACTTTGCCAAAGCATTGGCAGAAGGCTAT...TAACCACGCTCCTGGGCACGGTGTCTGTCTTCCTAAGCATGGCTGTACTTTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135562.8 |
||
| CDS-3UTR GCA 90 bp | CAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTTGCTATCTGAGTCACGGTaGTCTTCAGATAGCCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QSRHTFGSRKELHIEALLLSESR*SSDSLL Trigger: CAGAAGGCTATCTGAAGAGCACCGTGACTCAGATAG...CAAAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000205214.3 |
||
| CDS-3UTR GCA 90 bp | AGCAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTCTATCTGAGTCACGGTaGTCTTCAGATAGCCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SKAGIPLEAERNCTLKPFLSESR*SSDSLL Trigger: CAGAAGGCTATCTGAAGAGCACCGTGACTCAGATAG...AAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000205214.3 |
||
| CDS-3UTR GCA 90 bp | CAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTTGAATGGGTCCTATAATTaGCACTGTCTGCACACACCC | + |
|
Preference number: 4 (lower is better) Translates to: QSRHTFGSRKELHIEALLNGSYN*HCLHTP Trigger: GGGTGTGTGCAGACAGTGGCAATTATAGGACCCATT...CAAAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000203140.2 ENSMUST00000205214.3 |
||
| CDS-3UTR GCA 90 bp | CCTGACTTGGGGGCTGCAAATCCCACACAAGTGCAGTTAGAAAATATAATGTTCAATGGGTCCTATAATTaGCACTGTCTGCACACACCC | + |
|
Preference number: 4 (lower is better) Translates to: PDLGAANPTQVQLENIMFNGSYN*HCLHTP Trigger: GGGTGTGTGCAGACAGTGGCAATTATAGGACCCATT...GAACATTATATTTTCTAACTGCACTTGTGTGGGATTTGCAGCCCCCAAGTCAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135562.8 |
||
| CDS-3UTR GCA 90 bp | AGCAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTAATGGGTCCTATAATTaGCACTGTCTGCACACACCC | + |
|
Preference number: 4 (lower is better) Translates to: SKAGIPLEAERNCTLKPFNGSYN*HCLHTP Trigger: GGGTGTGTGCAGACAGTGGCAATTATAGGACCCATT...AAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000203140.2 ENSMUST00000205214.3 |
||
| CDS-3UTR GCA 90 bp | CAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTTGGCTTTGGAAGAAGACTaGCCATACTGCTGCTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: QSRHTFGSRKELHIEALLALEED*PYCCSM Trigger: CATTGAGCAGCAGTATGGGCAGTCTTCTTCCAAAGC...CAAAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000203140.2 ENSMUST00000205214.3 |
||
| CDS-3UTR GCA 90 bp | GGGGGCTGCAAATCCCACACAAGTGCAGTTAGAAAATATAATGTTCTTTCCACTTATTCCAAGGGCCACTaGAGGAATGTTGATGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GGCKSHTSAVRKYNVLSTYSKGH*RNVDEP Trigger: GGGCTCATCAACATTCCTGCAGTGGCCCTTGGAATA...AGTGGAAAGAACATTATATTTTCTAACTGCACTTGTGTGGGATTTGCAGCCCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135562.8 |
||
| CDS-3UTR GCA 90 bp | CAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTTGTATCTTTCTGACACCTaGCCATCATGCCTGACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QSRHTFGSRKELHIEALLYLSDT*PSCLTS Trigger: ACTGGTCAGGCATGATGGGCAGGTGTCAGAAAGATA...CAAAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032362.12 ENSMUST00000203140.2 ENSMUST00000205214.3 |
||
| CDS-3UTR CCA 90 bp | CAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTTGAGACATAAACCCACATaGAGGAGCTGGAATCCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: QSRHTFGSRKELHIEALLRHKPT*RSWNPL Trigger: TAGGGGATTCCAGCTCCTCCATGTGGGTTTATGTCT...CAAAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000203140.2 |
||
| CDS-3UTR CCA 90 bp | AGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTTGATTATGACCAGTTTCCTGACTTaGGGGCTGCAAATCCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: RHTFGSRKELHIEALLIMTSFLT*GLQIPH Trigger: GTGTGGGATTTGCAGCCCCCAAGTCAGGAAACTGGT...CATAATCAAAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032362.12 ENSMUST00000203140.2 ENSMUST00000205214.3 |
||
| CDS-3UTR CCA 90 bp | CGATCCCTTGCAGCGCATGTCTCCTTTTTGATGCTTGAAGACATCCCTATTTTTAAAGTACACAGGGGCTaGGATTCCTGCAAGAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: RSLAAHVSFLMLEDIPIFKVHRG*DSCKNS Trigger: AGAGTTCTTGCAGGAATCCCAGCCCCTGTGTACTTT...AAAAATAGGGATGTCTTCAAGCATCAAAAAGGAGACATGCGCTGCAAGGGATCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000203140.2 |
||
| CDS-3UTR CCA 90 bp | AGCAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTAAAGTACACAGGGGCTaGGATTCCTGCAAGAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: SKAGIPLEAERNCTLKPFKVHRG*DSCKNS Trigger: AGAGTTCTTGCAGGAATCCCAGCCCCTGTGTACTTT...AAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032362.12 ENSMUST00000203140.2 ENSMUST00000205214.3 |
||
| 3UTR CAA 72 bp | GCAGGAATGTTGATGAGCCCAATGACAAAGTTGGCTTaGGAAGAAGACTGCCCATACTGCTGCTCAATGTAT | + |
|
Preference number: 4 (lower is better) Translates to: AGMLMSPMTKLA*EEDCPYCCSMY Trigger: ATACATTGAGCAGCAGTATGGGCAGTCTTCTTCCAAAGCCAACTTTGTCATTGGGCTCATCAACATTCCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204998.3 |
||
| CDS-3UTR TCA 90 bp | GTCAAAAGCAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGTCCGGCAGGTTGCGCTaGATTTTTGTGGAACAAATG | + |
|
Preference number: 4 (lower is better) Translates to: VKSKAGIPLEAERNCTLKSGRLR*IFVEQM Trigger: CATTTGTTCCACAAAAATTCAGCGCAACCTGCCGGA...CTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTGCTTTTGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000204998.3 ENSMUST00000205214.3 |
||
| CDS-3UTR TCA 90 bp | GGCTGCAAATCCCACACAAGTGCAGTTAGAAAATATAATGTTCTTTCCACTCCGAACCTTCTCTCTATCTaGGTCACGGTGCTCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GCKSHTSAVRKYNVLSTPNLLSI*VTVLFR Trigger: TCTGAAGAGCACCGTGACTCAGATAGAGAGAAGGTT...CGGAGTGGAAAGAACATTATATTTTCTAACTGCACTTGTGTGGGATTTGCAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135562.8 |
||
| CDS-3UTR TCA 90 bp | AATCCACGATCCCTTGCAGCGCATGTCTCCTTTTTGATGCTTGAAGACATCCCTTCCCCTACACATTCGTaGCTTATTTTGTTCTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: NPRSLAAHVSFLMLEDIPSPTHS*LILFCD Trigger: ATCACAGAACAAAATAAGTCACGAATGTGTAGGGGA...AGGGATGTCTTCAAGCATCAAAAAGGAGACATGCGCTGCAAGGGATCGTGGATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000135562.8 ENSMUST00000203140.2 |
||
| CDS-3UTR TCA 90 bp | AGCAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTTGCCAAATAGAGAATTaGACTGAACGGTGCTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SKAGIPLEAERNCTLKPFCQIEN*TERCLH Trigger: GTGCAAGCACCGTTCAGTTCAATTCTCTATTTGGCA...AAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000203140.2 ENSMUST00000205214.3 |
||
| CDS-3UTR TCA 90 bp | CGATCCCTTGCAGCGCATGTCTCCTTTTTGATGCTTGAAGACATCCCTATTTTTTGCCAAATAGAGAATTaGACTGAACGGTGCTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RSLAAHVSFLMLEDIPIFCQIEN*TERCLH Trigger: GTGCAAGCACCGTTCAGTTCAATTCTCTATTTGGCA...AAAAATAGGGATGTCTTCAAGCATCAAAAAGGAGACATGCGCTGCAAGGGATCG 44% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000135562.8 ENSMUST00000203140.2 |
||
| CDS-3UTR TCA 90 bp | AGCAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTGTCTGCACACACCCGTaGCTTATTTTGTTCTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SKAGIPLEAERNCTLKPFVCTHP*LILFCD Trigger: ATCACAGAACAAAATAAGTCACGGGTGTGTGCAGAC...AAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205214.3 |
||
| CDS-3UTR GCA 90 bp | AGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTTGATTATGTATTCCAAGGGCCACTaGAGGAATGTTGATGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RHTFGSRKELHIEALLIMYSKGH*RNVDEP Trigger: GGGCTCATCAACATTCCTGCAGTGGCCCTTGGAATA...CATAATCAAAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000203140.2 ENSMUST00000205214.3 |
||
| CDS-3UTR GCA 90 bp | CAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTTGCAAAAAGTACAGCCATaGTTAGGAAGACAGACACCG | + |
|
Preference number: 4 (lower is better) Translates to: QSRHTFGSRKELHIEALLQKVQP*LGRQTP Trigger: CGGTGTCTGTCTTCCTAAGCATGGCTGTACTTTTTG...CAAAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032362.12 ENSMUST00000205214.3 |
||
| CDS-3UTR GCA 90 bp | TTTCTGTATCAGTTCAAGGAGGAGCTAAATCTGAAAGATCTCCTTAGGAAATACGGCCAGTACTTGGGCTaGAATCCACGATCCCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FLYQFKEELNLKDLLRKYGQYLG*NPRSLA Trigger: TGCAAGGGATCGTGGATTGCAGCCCAAGTACTGGCC...GTATTTCCTAAGGAGATCTTTCAGATTTAGCTCCTCCTTGAACTGATACAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032362.12 |
||
| CDS-3UTR CCA 90 bp | AGCAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTCAGCATTGTCTTCACTaGCAAAGTCATCCAGATAGG | + |
|
Preference number: 4 (lower is better) Translates to: SKAGIPLEAERNCTLKPFQHCLH*QSHPDR Trigger: CCTATCTGGATGACTTTGCCAGTGAAGACAATGCTG...AAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000203140.2 |
||
| CDS-3UTR CCA 90 bp | CGATCCCTTGCAGCGCATGTCTCCTTTTTGATGCTTGAAGACATCCCTATTTTTTGGATTTCTCAGATGTaGAGCCAGAGTTCTCTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: RSLAAHVSFLMLEDIPIFWISQM*SQSSLY Trigger: GTAGAGAGAACTCTGGCTCCACATCTGAGAAATCCA...AAAAATAGGGATGTCTTCAAGCATCAAAAAGGAGACATGCGCTGCAAGGGATCG 44% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000135562.8 ENSMUST00000203140.2 |
||
| 3UTR CAA 72 bp | AGAAAATATAATGTTCTTTCCACTCCGGCTGGAGGATaGACAGCCAGCAAGACAAGCCGACACATAGGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: RKYNVLSTPAGG*TASKTSRHIGN Trigger: ATTACCTATGTGTCGGCTTGTCTTGCTGGCTGTCAATCCTCCAGCCGGAGTGGAAAGAACATTATATTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135562.8 ENSMUST00000204998.3 |
||
| CDS-3UTR TCA 90 bp | TTTCTGTATCAGTTCAAGGAGGAGCTAAATCTGAAAGATCTCCTTAGGAAATACCACCCAAGAACACCTTaGGTTTTCCACAGCATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FLYQFKEELNLKDLLRKYHPRTP*VFHSMA Trigger: GGCCATGCTGTGGAAAACTCAAGGTGTTCTTGGGTG...GTATTTCCTAAGGAGATCTTTCAGATTTAGCTCCTCCTTGAACTGATACAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032362.12 |
||
| CDS-3UTR TCA 90 bp | AGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTTGATTATGAACCTTCTCTCTATCTaGGTCACGGTGCTCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RHTFGSRKELHIEALLIMNLLSI*VTVLFR Trigger: TCTGAAGAGCACCGTGACTCAGATAGAGAGAAGGTT...CATAATCAAAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000205214.3 |
||
| CDS-3UTR TCA 90 bp | AGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTTGATTATGAGCTGTACTTCTCCATaGAGAACTGGGGTACAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: RHTFGSRKELHIEALLIMSCTSP*RTGVQQ Trigger: TTGCTGTACCCCAGTTCTTCATGGAGAAGTACAGCT...CATAATCAAAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000203140.2 ENSMUST00000205214.3 |
||
| CDS-3UTR TCA 90 bp | CAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTTGGAGGATCCTTTGGGGTaGTTGTTATATGGTCTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: QSRHTFGSRKELHIEALLEDPLG*LLYGLD Trigger: ATCTAGACCATATAACAATCACCCCAAAGGATCCTC...CAAAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000203140.2 ENSMUST00000205214.3 |
||
| CDS-3UTR TCA 90 bp | CAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTTGAATAGAGAATTGAACTaGACGGTGCTTGCACACAAG | + |
|
Preference number: 4 (lower is better) Translates to: QSRHTFGSRKELHIEALLNRELN*TVLAHK Trigger: CTTGTGTGCAAGCACCGTTCAGTTCAATTCTCTATT...CAAAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000203140.2 ENSMUST00000205214.3 |
||
| CDS-3UTR TCA 90 bp | GTCAAAAGCAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGTGCCAAATAGAGAATTaGACTGAACGGTGCTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VKSKAGIPLEAERNCTLKCQIEN*TERCLH Trigger: GTGCAAGCACCGTTCAGTTCAATTCTCTATTTGGCA...CTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTGCTTTTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000203140.2 ENSMUST00000205214.3 |
||
| CDS-3UTR TCA 90 bp | CATGTCATAATCAAACATAATAGACAGCCATCCCCAGGAACACATATCACATATGAGCACAGAGCTACATaGGTGTGCTTGGCACTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: HVIIKHNRQPSPGTHITYEHRAT*VCLALY Trigger: GTACAGTGCCAAGCACACTCATGTAGCTCTGTGCTC...ATATGTGATATGTGTTCCTGGGGATGGCTGTCTATTATGTTTGATTATGACATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203140.2 |
||
| CDS-3UTR GCA 90 bp | AGCAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTGAAGACTGCCCATACTaGTGCTCAATGTATTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SKAGIPLEAERNCTLKPFEDCPY*CSMYFG Trigger: ACCAAAATACATTGAGCAGCAGTATGGGCAGTCTTC...AAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000203140.2 ENSMUST00000205214.3 |
||
| CDS-3UTR GCA 90 bp | AGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTTGATTATGGCTTTGGAAGAAGACTaGCCATACTGCTGCTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: RHTFGSRKELHIEALLIMALEED*PYCCSM Trigger: CATTGAGCAGCAGTATGGGCAGTCTTCTTCCAAAGC...CATAATCAAAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000203140.2 ENSMUST00000205214.3 |
||
| CDS-3UTR GCA 90 bp | CAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTTGATTTTCACATCCCAGTaGAAACAGAGAGAGGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QSRHTFGSRKELHIEALLIFTSQ*KQREEE Trigger: CTCTTCCTCTCTCTGTTTGCACTGGGATGTGAAAAT...CAAAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000203140.2 ENSMUST00000205214.3 |
||
| CDS-3UTR GCA 90 bp | CGATCCCTTGCAGCGCATGTCTCCTTTTTGATGCTTGAAGACATCCCTATTTTTATTTTCACATCCCAGTaGAAACAGAGAGAGGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RSLAAHVSFLMLEDIPIFIFTSQ*KQREEE Trigger: CTCTTCCTCTCTCTGTTTGCACTGGGATGTGAAAAT...AAAAATAGGGATGTCTTCAAGCATCAAAAAGGAGACATGCGCTGCAAGGGATCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000135562.8 ENSMUST00000203140.2 |
||
| CDS-3UTR GCA 90 bp | AGCAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTATTTTCACATCCCAGTaGAAACAGAGAGAGGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SKAGIPLEAERNCTLKPFIFTSQ*KQREEE Trigger: CTCTTCCTCTCTCTGTTTGCACTGGGATGTGAAAAT...AAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000203140.2 ENSMUST00000205214.3 |
||
| CDS-3UTR GCA 90 bp | AGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTTGATTATGTATCTTTCTGACACCTaGCCATCATGCCTGACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RHTFGSRKELHIEALLIMYLSDT*PSCLTS Trigger: ACTGGTCAGGCATGATGGGCAGGTGTCAGAAAGATA...CATAATCAAAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032362.12 ENSMUST00000203140.2 ENSMUST00000205214.3 |
||
| CDS-3UTR CCA 90 bp | CCATCCCCAGGAACACATATCACATATCAATGGAGACAATATAGCATGAAGCAGCAGCATTGTCTTCACTaGCAAAGTCATCCAGATAGG | + |
|
Preference number: 4 (lower is better) Translates to: PSPGTHITYQWRQYSMKQQHCLH*QSHPDR Trigger: CCTATCTGGATGACTTTGCCAGTGAAGACAATGCTG...CTGCTTCATGCTATATTGTCTCCATTGATATGTGATATGTGTTCCTGGGGATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032362.12 ENSMUST00000203140.2 |
||
| CDS-3UTR CCA 90 bp | CAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTTGGAGTTCTCTCTACTTTaGGATCTTGGTAGAGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QSRHTFGSRKELHIEALLEFSLL*DLGRVL Trigger: CAAGACTCTACCAAGATCCCAAAGTAGAGAGAACTC...CAAAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000203140.2 ENSMUST00000205214.3 |
||
| CDS-3UTR CCA 90 bp | GTCAAAAGCAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGTGGATTTCTCAGATGTaGAGCCAGAGTTCTCTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: VKSKAGIPLEAERNCTLKWISQM*SQSSLY Trigger: GTAGAGAGAACTCTGGCTCCACATCTGAGAAATCCA...CTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTGCTTTTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000203140.2 ENSMUST00000205214.3 |
||
| CDS-3UTR CCA 90 bp | CATGTCATAATCAAACATAATAGACAGCCATCCCCAGGAACACATATCACATATACCAGTTTCCTGACTTaGGGGCTGCAAATCCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: HVIIKHNRQPSPGTHITYTSFLT*GLQIPH Trigger: GTGTGGGATTTGCAGCCCCCAAGTCAGGAAACTGGT...ATATGTGATATGTGTTCCTGGGGATGGCTGTCTATTATGTTTGATTATGACATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032362.12 ENSMUST00000203140.2 |
||
| CDS-3UTR CCA 90 bp | AGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTTGATTATGAAAGTACACAGGGGCTaGGATTCCTGCAAGAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: RHTFGSRKELHIEALLIMKVHRG*DSCKNS Trigger: AGAGTTCTTGCAGGAATCCCAGCCCCTGTGTACTTT...CATAATCAAAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032362.12 ENSMUST00000203140.2 ENSMUST00000205214.3 |
||
| 3UTR CAA 72 bp | CAGGAGCCTCTGCTTCCACATTTCTTAAATCCCCATTaGAGGCATGAAGTGTCAATCAAAACACCAAAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: QEPLLPHFLNPH*RHEVSIKTPKY Trigger: GTACTTTGGTGTTTTGATTGACACTTCATGCCTCAAATGGGGATTTAAGAAATGTGGAAGCAGAGGCTCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135562.8 ENSMUST00000204998.3 |
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| CDS-3UTR TCA 90 bp | GTCAAAAGCAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGGAGGATCCTTTGGGGTaGTTGTTATATGGTCTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VKSKAGIPLEAERNCTLKEDPLG*LLYGLD Trigger: ATCTAGACCATATAACAATCACCCCAAAGGATCCTC...CTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTGCTTTTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000203140.2 ENSMUST00000205214.3 |
||
| CDS-3UTR TCA 90 bp | GTCAAAAGCAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGAATAGAGAATTGAACTaGACGGTGCTTGCACACAAG | + |
|
Preference number: 4 (lower is better) Translates to: VKSKAGIPLEAERNCTLKNRELN*TVLAHK Trigger: CTTGTGTGCAAGCACCGTTCAGTTCAATTCTCTATT...CTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTGCTTTTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000203140.2 ENSMUST00000205214.3 |
||
| CDS-3UTR GCA 90 bp | GTCAAAAGCAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGGAAGACTGCCCATACTaGTGCTCAATGTATTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VKSKAGIPLEAERNCTLKEDCPY*CSMYFG Trigger: ACCAAAATACATTGAGCAGCAGTATGGGCAGTCTTC...CTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTGCTTTTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000203140.2 ENSMUST00000205214.3 |
||
| CDS-3UTR GCA 90 bp | GCTGCAAATCCCACACAAGTGCAGTTAGAAAATATAATGTTCTTTCCACTCCGGGAAGACTGCCCATACTaGTGCTCAATGTATTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: AANPTQVQLENIMFFPLREDCPY*CSMYFG Trigger: ACCAAAATACATTGAGCAGCAGTATGGGCAGTCTTC...CCGGAGTGGAAAGAACATTATATTTTCTAACTGCACTTGTGTGGGATTTGCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135562.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTTGCTTCTGCCAATGCTTTaGCAAAGTAAACAAACGACA | + |
|
Preference number: 4 (lower is better) Translates to: QSRHTFGSRKELHIEALLLLPML*QSKQTT Trigger: TGTCGTTTGTTTACTTTGCCAAAGCATTGGCAGAAG...CAAAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000205214.3 |
||
| CDS-3UTR GCA 90 bp | AGCAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTATAGCCTTCTGCCAATaGTTTGGCAAAGTAAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: SKAGIPLEAERNCTLKPFIAFCQ*FGKVNK Trigger: TTTGTTTACTTTGCCAAAGCATTGGCAGAAGGCTAT...AAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000205214.3 |
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| CDS-3UTR CCA 90 bp | CCTGACTTGGGGGCTGCAAATCCCACACAAGTGCAGTTAGAAAATATAATGTTCTGCGCTGAATTTTTGTaGAACAAATGGGCATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PDLGAANPTQVQLENIMFCAEFL*NKWAFS Trigger: AGAAAATGCCCATTTGTTCCACAAAAATTCAGCGCA...GAACATTATATTTTCTAACTGCACTTGTGTGGGATTTGCAGCCCCCAAGTCAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000135562.8 ENSMUST00000204998.3 |
||
| CDS-3UTR CCA 90 bp | TTCTCTCTACTTTGGGATCTTGGTAGAGTCTTGGGTAAGCACCAGAAAGGAACATGCGCTGAATTTTTGTaGAACAAATGGGCATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FSLLWDLGRVLGKHQKGTCAEFL*NKWAFS Trigger: AGAAAATGCCCATTTGTTCCACAAAAATTCAGCGCA...TGTTCCTTTCTGGTGCTTACCCAAGACTCTACCAAGATCCCAAAGTAGAGAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204998.3 |
||
| CDS-3UTR CCA 90 bp | CAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTTGCTGCTCAATGTATTTTaGTTTATATGTGACCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: QSRHTFGSRKELHIEALLLLNVF*FICDHA Trigger: GGCATGGTCACATATAAACCAAAATACATTGAGCAG...CAAAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000203140.2 ENSMUST00000205214.3 |
||
| CDS-3UTR GCA 90 bp | CATGTCATAATCAAACATAATAGACAGCCATCCCCAGGAACACATATCACATATCAAAAAGTACAGCCATaGTTAGGAAGACAGACACCG | + |
|
Preference number: 4 (lower is better) Translates to: HVIIKHNRQPSPGTHITYQKVQP*LGRQTP Trigger: CGGTGTCTGTCTTCCTAAGCATGGCTGTACTTTTTG...ATATGTGATATGTGTTCCTGGGGATGGCTGTCTATTATGTTTGATTATGACATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032362.12 |
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| CDS-3UTR CCA 90 bp | GTCAAAAGCAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGTGCGCTGAATTTTTGTaGAACAAATGGGCATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VKSKAGIPLEAERNCTLKCAEFL*NKWAFS Trigger: AGAAAATGCCCATTTGTTCCACAAAAATTCAGCGCA...CTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTGCTTTTGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000204998.3 ENSMUST00000205214.3 |
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| CDS-3UTR CCA 90 bp | CATGTCATAATCAAACATAATAGACAGCCATCCCCAGGAACACATATCACATATTGGATTTCTCAGATGTaGAGCCAGAGTTCTCTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: HVIIKHNRQPSPGTHITYWISQM*SQSSLY Trigger: GTAGAGAGAACTCTGGCTCCACATCTGAGAAATCCA...ATATGTGATATGTGTTCCTGGGGATGGCTGTCTATTATGTTTGATTATGACATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032362.12 ENSMUST00000203140.2 |
||
| CDS-3UTR CCA 90 bp | CTTGGGGGCTGCAAATCCCACACAAGTGCAGTTAGAAAATATAATGTTCTTTCCCTGCTCAATGTATTTTaGTTTATATGTGACCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: LGGCKSHTSAVRKYNVLSLLNVF*FICDHA Trigger: GGCATGGTCACATATAAACCAAAATACATTGAGCAG...GGAAAGAACATTATATTTTCTAACTGCACTTGTGTGGGATTTGCAGCCCCCAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000135562.8 |
||
| CDS-3UTR TCA 90 bp | CATGTCATAATCAAACATAATAGACAGCCATCCCCAGGAACACATATCACATATAATAGAGAATTGAACTaGACGGTGCTTGCACACAAG | + |
|
Preference number: 4 (lower is better) Translates to: HVIIKHNRQPSPGTHITYNRELN*TVLAHK Trigger: CTTGTGTGCAAGCACCGTTCAGTTCAATTCTCTATT...ATATGTGATATGTGTTCCTGGGGATGGCTGTCTATTATGTTTGATTATGACATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032362.12 ENSMUST00000203140.2 |
||
| CDS-3UTR GCA 90 bp | TTTCTGTATCAGTTCAAGGAGGAGCTAAATCTGAAAGATCTCCTTAGGAAATACCTTCAGATAGCCTTCTaGCAATGCTTTGGCAAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: FLYQFKEELNLKDLLRKYLQIAF*QCFGKV Trigger: TACTTTGCCAAAGCATTGGCAGAAGGCTATCTGAAG...GTATTTCCTAAGGAGATCTTTCAGATTTAGCTCCTCCTTGAACTGATACAGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032362.12 |
||
| CDS-3UTR GCA 90 bp | TTTCTGTATCAGTTCAAGGAGGAGCTAAATCTGAAAGATCTCCTTAGGAAATACGAAGACTGCCCATACTaGTGCTCAATGTATTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FLYQFKEELNLKDLLRKYEDCPY*CSMYFG Trigger: ACCAAAATACATTGAGCAGCAGTATGGGCAGTCTTC...GTATTTCCTAAGGAGATCTTTCAGATTTAGCTCCTCCTTGAACTGATACAGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032362.12 ENSMUST00000203140.2 |
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| CDS-3UTR CCA 90 bp | AGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTTGATTATGTGCGCTGAATTTTTGTaGAACAAATGGGCATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RHTFGSRKELHIEALLIMCAEFL*NKWAFS Trigger: AGAAAATGCCCATTTGTTCCACAAAAATTCAGCGCA...CATAATCAAAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000204998.3 ENSMUST00000205214.3 |
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| CDS-3UTR CCA 90 bp | TTTCTGTATCAGTTCAAGGAGGAGCTAAATCTGAAAGATCTCCTTAGGAAATACGAGTTCTCTCTACTTTaGGATCTTGGTAGAGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FLYQFKEELNLKDLLRKYEFSLL*DLGRVL Trigger: CAAGACTCTACCAAGATCCCAAAGTAGAGAGAACTC...GTATTTCCTAAGGAGATCTTTCAGATTTAGCTCCTCCTTGAACTGATACAGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032362.12 ENSMUST00000203140.2 |
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| CDS-3UTR CCA 90 bp | AGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTTGATTATGCTGCTCAATGTATTTTaGTTTATATGTGACCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: RHTFGSRKELHIEALLIMLLNVF*FICDHA Trigger: GGCATGGTCACATATAAACCAAAATACATTGAGCAG...CATAATCAAAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000203140.2 ENSMUST00000205214.3 |
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| CDS-3UTR TCA 90 bp | TTTCTGTATCAGTTCAAGGAGGAGCTAAATCTGAAAGATCTCCTTAGGAAATACTCCCCTACACATTCGTaGCTTATTTTGTTCTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: FLYQFKEELNLKDLLRKYSPTHS*LILFCD Trigger: ATCACAGAACAAAATAAGTCACGAATGTGTAGGGGA...GTATTTCCTAAGGAGATCTTTCAGATTTAGCTCCTCCTTGAACTGATACAGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032362.12 ENSMUST00000203140.2 |
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| CDS-3UTR CCA 90 bp | CATGTCATAATCAAACATAATAGACAGCCATCCCCAGGAACACATATCACATATCTTCTGCCAATGCTTTaGCAAAGTAAACAAACGACA | + |
|
Preference number: 4 (lower is better) Translates to: HVIIKHNRQPSPGTHITYLLPML*QSKQTT Trigger: TGTCGTTTGTTTACTTTGCCAAAGCATTGGCAGAAG...ATATGTGATATGTGTTCCTGGGGATGGCTGTCTATTATGTTTGATTATGACATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032362.12 |
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| CDS-3UTR GCA 90 bp | CATGTCATAATCAAACATAATAGACAGCCATCCCCAGGAACACATATCACATATATAGCCTTCTGCCAATaGTTTGGCAAAGTAAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: HVIIKHNRQPSPGTHITYIAFCQ*FGKVNK Trigger: TTTGTTTACTTTGCCAAAGCATTGGCAGAAGGCTAT...ATATGTGATATGTGTTCCTGGGGATGGCTGTCTATTATGTTTGATTATGACATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032362.12 |
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| CDS-3UTR CCA 90 bp | TTTCTGTATCAGTTCAAGGAGGAGCTAAATCTGAAAGATCTCCTTAGGAAATACCTGCTCAATGTATTTTaGTTTATATGTGACCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: FLYQFKEELNLKDLLRKYLLNVF*FICDHA Trigger: GGCATGGTCACATATAAACCAAAATACATTGAGCAG...GTATTTCCTAAGGAGATCTTTCAGATTTAGCTCCTCCTTGAACTGATACAGAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032362.12 ENSMUST00000203140.2 |
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| CDS CCA 90 bp | AACAAACGACAGGGCACCCAAGAACACCTTGAGTTTTCCACAGCATaGCCGCGCTTCCTCTGTGGACGGATATCCGACTGTAAAGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: NKRQGTQEHLEFSTA*PRFLCGRISDCKGW Trigger: CCATCCTTTACAGTCGGATATCCGTCCACAGAGGAAGCGCGGCCATGCTGTGGAAAACTCAAGGTGTTCTTGGGTGCCCTGTCGTTTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000205214.3 |
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| CDS-3UTR CAA 90 bp | TTTTTAAAGTCGTGTCTCCTTGCCTGGCCAGTACTTGGGCTGCAATCCACGATCACTCCGGCTGGAGGATaGACAGCCAGCAAGACAAGC | + |
|
Preference number: 5 (lower is better) Translates to: FLKSCLLAWPVLGLQSTITPAGG*TASKTS Trigger: GCTTGTCTTGCTGGCTGTCAATCCTCCAGCCGGAGT...GATCGTGGATTGCAGCCCAAGTACTGGCCAGGCAAGGAGACACGACTTTAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000203140.2 |
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| CDS TCA 90 bp | ATGCTTTGGCAAAGTAAACAAACGACAGGGCACCCAAGAACACCTTaGGTTTTCCACAGCATGGCCGCGCTTCCTCTGTGGACGGATATC | + |
|
Preference number: 5 (lower is better) Translates to: MLWQSKQTTGHPRTP*VFHSMAALPLWTDI Trigger: GATATCCGTCCACAGAGGAAGCGCGGCCATGCTGTGGAAAACTCAAGGTGTTCTTGGGTGCCCTGTCGTTTGTTTACTTTGCCAAAGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000205214.3 |
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| CDS-3UTR CAA 90 bp | AGCAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTACTCCGGCTGGAGGATaGACAGCCAGCAAGACAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SKAGIPLEAERNCTLKPFTPAGG*TASKTS Trigger: GCTTGTCTTGCTGGCTGTCAATCCTCCAGCCGGAGT...AAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032362.12 ENSMUST00000203140.2 ENSMUST00000205214.3 |
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| CDS GCA 90 bp | GGGTACAGCAATGAGCATAGTTCCGAAGCCCATGACCAGGCATCCTaGTCCAATTATTTTTGGCCTGTGAAGTTTGGCACCAAAGTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GYSNEHSSEAHDQAS*SNYFWPVKFGTKVA Trigger: AGCTACTTTGGTGCCAAACTTCACAGGCCAAAAATAATTGGAGCAGGATGCCTGGTCATGGGCTTCGGAACTATGCTCATTGCTGTACCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000205214.3 |
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| CDS-3UTR CAA 90 bp | AAATATAATGTTCTTTCCACTCCGGCTGGAGGATTGACAGCCAGCAAGACAAGCGTGATTTCCCCAGGATaGAGCTTGGTGATGGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: KYNVLSTPAGGLTASKTSVISPG*SLVMDC Trigger: GCAGTCCATCACCAAGCTCAATCCTGGGGAAATCAC...GCTTGTCTTGCTGGCTGTCAATCCTCCAGCCGGAGTGGAAAGAACATTATATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135562.8 |
||
| CDS-3UTR CAA 90 bp | CTTAGGAAGACAGACACCGTGCCCAGGAGCGTGGTTAATCCCAGGTATATGTGTATGACAAAGTTGGCTTaGGAAGAAGACTGCCCATAC | + |
|
Preference number: 5 (lower is better) Translates to: LRKTDTVPRSVVNPRYMCMTKLA*EEDCPY Trigger: GTATGGGCAGTCTTCTTCCAAAGCCAACTTTGTCAT...ACACATATACCTGGGATTAACCACGCTCCTGGGCACGGTGTCTGTCTTCCTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135562.8 ENSMUST00000203140.2 |
||
| CDS-3UTR CAA 90 bp | TTTTTAAAGTCGTGTCTCCTTGCCTGGCCAGTACTTGGGCTGCAATCCACGATCAGCCCAATGACAAAGTaGGCTTTGGAAGAAGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: FLKSCLLAWPVLGLQSTISPMTK*ALEEDC Trigger: GCAGTCTTCTTCCAAAGCCAACTTTGTCATTGGGCT...GATCGTGGATTGCAGCCCAAGTACTGGCCAGGCAAGGAGACACGACTTTAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000135562.8 ENSMUST00000203140.2 |
||
| CDS-3UTR CAA 90 bp | GTCAAAAGCAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGTTGCCTGGCCAGTACTaGGGCTGCAATCCACGATCC | + |
|
Preference number: 5 (lower is better) Translates to: VKSKAGIPLEAERNCTLKLPGQY*GCNPRS Trigger: GGATCGTGGATTGCAGCCCAAGTACTGGCCAGGCAA...CTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTGCTTTTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032362.12 ENSMUST00000205214.3 |
||
| CDS GCA 90 bp | TCTCTCTATCTGAGTCACGGTGCTCTTCAGATAGCCTTCTGCCAATaGTTTGGCAAAGTAAACAAACGACAGGGCACCCAAGAACACCTT | + |
|
Preference number: 5 (lower is better) Translates to: SLYLSHGALQIAFCQ*FGKVNKRQGTQEHL Trigger: AAGGTGTTCTTGGGTGCCCTGTCGTTTGTTTACTTTGCCAAAGCATTGGCAGAAGGCTATCTGAAGAGCACCGTGACTCAGATAGAGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000205214.3 |
||
| CDS-3UTR CAA 90 bp | CAAAAAGTACAGCCATGCTTAGGAAGACAGACACCGTGCCCAGGAGCGTGGTTAGGTTGCGCTGAATTTTaGTGGAACAAATGGGCATTT | + |
|
Preference number: 5 (lower is better) Translates to: QKVQPCLGRQTPCPGAWLGCAEF*WNKWAF Trigger: AAATGCCCATTTGTTCCACAAAAATTCAGCGCAACC...TAACCACGCTCCTGGGCACGGTGTCTGTCTTCCTAAGCATGGCTGTACTTTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000135562.8 ENSMUST00000204998.3 |
||
| CDS-3UTR CAA 90 bp | CAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTTGGTGATTTCCCCAGGATaGAGCTTGGTGATGGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: QSRHTFGSRKELHIEALLVISPG*SLVMDC Trigger: GCAGTCCATCACCAAGCTCAATCCTGGGGAAATCAC...CAAAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000203140.2 ENSMUST00000205214.3 |
||
| CDS-3UTR CAA 90 bp | AGCAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTGTGATTTCCCCAGGATaGAGCTTGGTGATGGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: SKAGIPLEAERNCTLKPFVISPG*SLVMDC Trigger: GCAGTCCATCACCAAGCTCAATCCTGGGGAAATCAC...AAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000203140.2 ENSMUST00000205214.3 |
||
| CDS-3UTR CAA 90 bp | CCATCATGCCTGACCAGTTTCCTGACTTGGGGGCTGCAAATCCCACACAAGTGCTATCAACATACAGTTTaGCGCATAATGAGCCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: PSCLTSFLTWGLQIPHKCYQHTV*RIMSPK Trigger: TTTTGGGCTCATTATGCGCAAAACTGTATGTTGATA...GCACTTGTGTGGGATTTGCAGCCCCCAAGTCAGGAAACTGGTCAGGCATGATGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135562.8 |
||
| CDS-3UTR CAA 90 bp | CCACGATCCCTTGCAGCGCATGTCTCCTTTTTGATGCTTGAAGACATCCCTATTCTCTACTTTGGGATCTaGGTAGAGTCTTGGGTAAGC | + |
|
Preference number: 5 (lower is better) Translates to: PRSLAAHVSFLMLEDIPILYFGI*VESWVS Trigger: GCTTACCCAAGACTCTACCAAGATCCCAAAGTAGAG...AATAGGGATGTCTTCAAGCATCAAAAAGGAGACATGCGCTGCAAGGGATCGTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000135562.8 ENSMUST00000203140.2 |
||
| CDS-3UTR CAA 90 bp | AATCCACGATCCCTTGCAGCGCATGTCTCCTTTTTGATGCTTGAAGACATCCCTAGCCCAATGACAAAGTaGGCTTTGGAAGAAGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: NPRSLAAHVSFLMLEDIPSPMTK*ALEEDC Trigger: GCAGTCTTCTTCCAAAGCCAACTTTGTCATTGGGCT...AGGGATGTCTTCAAGCATCAAAAAGGAGACATGCGCTGCAAGGGATCGTGGATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000135562.8 ENSMUST00000203140.2 |
||
| CDS-3UTR CAA 90 bp | AGCAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTGACAGGTTTGGTTCCTaGGTAGGAGACAGTCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SKAGIPLEAERNCTLKPFDRFGS*VGDSQS Trigger: GGACTGACTGTCTCCTACCAAGGAACCAAACCTGTC...AAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032362.12 ENSMUST00000203140.2 ENSMUST00000205214.3 |
||
| CDS-3UTR CAA 90 bp | AGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTTGATTATGTTGCCTGGCCAGTACTaGGGCTGCAATCCACGATCC | + |
|
Preference number: 5 (lower is better) Translates to: RHTFGSRKELHIEALLIMLPGQY*GCNPRS Trigger: GGATCGTGGATTGCAGCCCAAGTACTGGCCAGGCAA...CATAATCAAAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032362.12 ENSMUST00000205214.3 |
||
| CDS GCA 90 bp | AAACCTTCTCTCTATCTGAGTCACGGTGCTCTTCAGATAGCCTTCTaGCAATGCTTTGGCAAAGTAAACAAACGACAGGGCACCCAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: KPSLYLSHGALQIAF*QCFGKVNKRQGTQE Trigger: TTCTTGGGTGCCCTGTCGTTTGTTTACTTTGCCAAAGCATTGGCAGAAGGCTATCTGAAGAGCACCGTGACTCAGATAGAGAGAAGGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000205214.3 |
||
| CDS GCA 90 bp | CCAGAGAGGAAGGGATCTCAAACCTTCTCTCTATCTGAGTCACGGTaGTCTTCAGATAGCCTTCTGCCAATGCTTTGGCAAAGTAAACAA | + |
|
Preference number: 5 (lower is better) Translates to: PERKGSQTFSLSESR*SSDSLLPMLWQSKQ Trigger: TTGTTTACTTTGCCAAAGCATTGGCAGAAGGCTATCTGAAGAGCACCGTGACTCAGATAGAGAGAAGGTTTGAGATCCCTTCCTCTCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000205214.3 |
||
| CDS-3UTR CAA 90 bp | TTTTTAAAGTCGTGTCTCCTTGCCTGGCCAGTACTTGGGCTGCAATCCACGATCGGTTGCGCTGAATTTTaGTGGAACAAATGGGCATTT | + |
|
Preference number: 5 (lower is better) Translates to: FLKSCLLAWPVLGLQSTIGCAEF*WNKWAF Trigger: AAATGCCCATTTGTTCCACAAAAATTCAGCGCAACC...GATCGTGGATTGCAGCCCAAGTACTGGCCAGGCAAGGAGACACGACTTTAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000135562.8 ENSMUST00000204998.3 |
||
| CDS-3UTR CAA 90 bp | CCATCCCCAGGAACACATATCACATATCAATGGAGACAATATAGCATGAAGCAGGTGATTTCCCCAGGATaGAGCTTGGTGATGGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: PSPGTHITYQWRQYSMKQVISPG*SLVMDC Trigger: GCAGTCCATCACCAAGCTCAATCCTGGGGAAATCAC...CTGCTTCATGCTATATTGTCTCCATTGATATGTGATATGTGTTCCTGGGGATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032362.12 ENSMUST00000203140.2 |
||
| CDS-3UTR CAA 90 bp | GTCAAAAGCAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGGACAGGTTTGGTTCCTaGGTAGGAGACAGTCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: VKSKAGIPLEAERNCTLKDRFGS*VGDSQS Trigger: GGACTGACTGTCTCCTACCAAGGAACCAAACCTGTC...CTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTGCTTTTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032362.12 ENSMUST00000203140.2 ENSMUST00000205214.3 |
||
| CDS CCA 90 bp | CATAGTTCCGAAGCCCATGACCAGGCATCCTGCTCCAATTATTTTTaGCCTGTGAAGTTTGGCACCAAAGTAGCTAACAAACGTTATGAC | + |
|
Preference number: 5 (lower is better) Translates to: HSSEAHDQASCSNYF*PVKFGTKVANKRYD Trigger: GTCATAACGTTTGTTAGCTACTTTGGTGCCAAACTTCACAGGCCAAAAATAATTGGAGCAGGATGCCTGGTCATGGGCTTCGGAACTATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000205214.3 |
||
| CDS-3UTR CAA 90 bp | CAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTTGCTCTACTTTGGGATCTaGGTAGAGTCTTGGGTAAGC | + |
|
Preference number: 5 (lower is better) Translates to: QSRHTFGSRKELHIEALLLYFGI*VESWVS Trigger: GCTTACCCAAGACTCTACCAAGATCCCAAAGTAGAG...CAAAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000203140.2 ENSMUST00000205214.3 |
||
| CDS-3UTR CAA 90 bp | AGCAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTCTCTACTTTGGGATCTaGGTAGAGTCTTGGGTAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SKAGIPLEAERNCTLKPFLYFGI*VESWVS Trigger: GCTTACCCAAGACTCTACCAAGATCCCAAAGTAGAG...AAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000203140.2 ENSMUST00000205214.3 |
||
| CDS-3UTR CAA 90 bp | CAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTTGAGCCCAATGACAAAGTaGGCTTTGGAAGAAGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: QSRHTFGSRKELHIEALLSPMTK*ALEEDC Trigger: GCAGTCTTCTTCCAAAGCCAACTTTGTCATTGGGCT...CAAAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000203140.2 ENSMUST00000205214.3 |
||
| CDS-3UTR CAA 90 bp | AGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTTGATTATGGACAGGTTTGGTTCCTaGGTAGGAGACAGTCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RHTFGSRKELHIEALLIMDRFGS*VGDSQS Trigger: GGACTGACTGTCTCCTACCAAGGAACCAAACCTGTC...CATAATCAAAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032362.12 ENSMUST00000203140.2 ENSMUST00000205214.3 |
||
| CDS-3UTR CAA 90 bp | TTTCTGTATCAGTTCAAGGAGGAGCTAAATCTGAAAGATCTCCTTAGGAAATACACTCCGGCTGGAGGATaGACAGCCAGCAAGACAAGC | + |
|
Preference number: 5 (lower is better) Translates to: FLYQFKEELNLKDLLRKYTPAGG*TASKTS Trigger: GCTTGTCTTGCTGGCTGTCAATCCTCCAGCCGGAGT...GTATTTCCTAAGGAGATCTTTCAGATTTAGCTCCTCCTTGAACTGATACAGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032362.12 ENSMUST00000203140.2 |
||
| CDS-3UTR CAA 90 bp | GGGGGCTGCAAATCCCACACAAGTGCAGTTAGAAAATATAATGTTCTTTCCACTCTCTACTTTGGGATCTaGGTAGAGTCTTGGGTAAGC | + |
|
Preference number: 5 (lower is better) Translates to: GGCKSHTSAVRKYNVLSTLYFGI*VESWVS Trigger: GCTTACCCAAGACTCTACCAAGATCCCAAAGTAGAG...AGTGGAAAGAACATTATATTTTCTAACTGCACTTGTGTGGGATTTGCAGCCCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135562.8 |
||
| CDS-3UTR CAA 90 bp | CAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTTGGGGTCATCTATGAACTaGGATTTCTCAGATGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: QSRHTFGSRKELHIEALLGSSMN*DFSDVE Trigger: CTCCACATCTGAGAAATCCAAGTTCATAGATGACCC...CAAAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000203140.2 ENSMUST00000205214.3 |
||
| CDS-3UTR CAA 90 bp | CAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTTGATGACAAAGTTGGCTTaGGAAGAAGACTGCCCATAC | + |
|
Preference number: 5 (lower is better) Translates to: QSRHTFGSRKELHIEALLMTKLA*EEDCPY Trigger: GTATGGGCAGTCTTCTTCCAAAGCCAACTTTGTCAT...CAAAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000203140.2 ENSMUST00000205214.3 |
||
| CDS-3UTR CAA 90 bp | CAGTTTCCTGACTTGGGGGCTGCAAATCCCACACAAGTGCAGTTAGAAAATATAATGACAAAGTTGGCTTaGGAAGAAGACTGCCCATAC | + |
|
Preference number: 5 (lower is better) Translates to: QFPDLGAANPTQVQLENIMTKLA*EEDCPY Trigger: GTATGGGCAGTCTTCTTCCAAAGCCAACTTTGTCAT...TATATTTTCTAACTGCACTTGTGTGGGATTTGCAGCCCCCAAGTCAGGAAACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135562.8 |
||
| CDS-3UTR CAA 90 bp | AGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTTGATTATGGCCACTGCAGGAATGTaGATGAGCCCAATGACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: RHTFGSRKELHIEALLIMATAGM*MSPMTK Trigger: CTTTGTCATTGGGCTCATCAACATTCCTGCAGTGGC...CATAATCAAAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000203140.2 ENSMUST00000205214.3 |
||
| CDS-3UTR CAA 90 bp | AATCCACGATCCCTTGCAGCGCATGTCTCCTTTTTGATGCTTGAAGACATCCCTAGCAAAAGACTTAAGTaGTGGTTGAATGCACCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: NPRSLAAHVSFLMLEDIPSKRLK*WLNAPQ Trigger: TTGAGGTGCATTCAACCACAACTTAAGTCTTTTGCT...AGGGATGTCTTCAAGCATCAAAAAGGAGACATGCGCTGCAAGGGATCGTGGATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203140.2 |
||
| CDS-3UTR CAA 90 bp | AATCCACGATCCCTTGCAGCGCATGTCTCCTTTTTGATGCTTGAAGACATCCCTTTCTTAAATCCCCATTaGAGGCATGAAGTGTCAATC | + |
|
Preference number: 5 (lower is better) Translates to: NPRSLAAHVSFLMLEDIPFLNPH*RHEVSI Trigger: GATTGACACTTCATGCCTCAAATGGGGATTTAAGAA...AGGGATGTCTTCAAGCATCAAAAAGGAGACATGCGCTGCAAGGGATCGTGGATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000203140.2 |
||
| CDS-3UTR CAA 90 bp | CCATCCCCAGGAACACATATCACATATCAATGGAGACAATATAGCATGAAGCAGGCGCATGTCTCCTTTTaGATGCTTGAAGACATCCCT | + |
|
Preference number: 5 (lower is better) Translates to: PSPGTHITYQWRQYSMKQAHVSF*MLEDIP Trigger: AGGGATGTCTTCAAGCATCAAAAAGGAGACATGCGC...CTGCTTCATGCTATATTGTCTCCATTGATATGTGATATGTGTTCCTGGGGATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032362.12 |
||
| CDS-3UTR CAA 90 bp | AGCAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTGGTTGCGCTGAATTTTaGTGGAACAAATGGGCATTT | + |
|
Preference number: 5 (lower is better) Translates to: SKAGIPLEAERNCTLKPFGCAEF*WNKWAF Trigger: AAATGCCCATTTGTTCCACAAAAATTCAGCGCAACC...AAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000204998.3 ENSMUST00000205214.3 |
||
| CDS-3UTR CAA 90 bp | TTTCTGTATCAGTTCAAGGAGGAGCTAAATCTGAAAGATCTCCTTAGGAAATACGCACCCAAGAACACCTaGAGTTTTCCACAGCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: FLYQFKEELNLKDLLRKYAPKNT*SFPQHG Trigger: GCCATGCTGTGGAAAACTCAAGGTGTTCTTGGGTGC...GTATTTCCTAAGGAGATCTTTCAGATTTAGCTCCTCCTTGAACTGATACAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032362.12 |
||
| CDS-3UTR CAA 90 bp | CCATCCCCAGGAACACATATCACATATCAATGGAGACAATATAGCATGAAGCAGCTGCTCCAATTATTTTaGGCCTGTGAAGTTTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: PSPGTHITYQWRQYSMKQLLQLF*ACEVWH Trigger: GTGCCAAACTTCACAGGCCAAAAATAATTGGAGCAG...CTGCTTCATGCTATATTGTCTCCATTGATATGTGATATGTGTTCCTGGGGATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032362.12 |
||
| CDS-3UTR CAA 90 bp | TTTCCTGACTTGGGGGCTGCAAATCCCACACAAGTGCAGTTAGAAAATATAATGCTGCTCCAATTATTTTaGGCCTGTGAAGTTTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: FPDLGAANPTQVQLENIMLLQLF*ACEVWH Trigger: GTGCCAAACTTCACAGGCCAAAAATAATTGGAGCAG...CATTATATTTTCTAACTGCACTTGTGTGGGATTTGCAGCCCCCAAGTCAGGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000135562.8 |
||
| CDS-3UTR CAA 90 bp | GTCAAAAGCAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCTGCTCCAATTATTTTaGGCCTGTGAAGTTTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: VKSKAGIPLEAERNCTLKLLQLF*ACEVWH Trigger: GTGCCAAACTTCACAGGCCAAAAATAATTGGAGCAG...CTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTGCTTTTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000205214.3 |
||
| CDS-3UTR CAA 90 bp | GGGGGCTGCAAATCCCACACAAGTGCAGTTAGAAAATATAATGTTCTTTCCACTGGGTCATCTATGAACTaGGATTTCTCAGATGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GGCKSHTSAVRKYNVLSTGSSMN*DFSDVE Trigger: CTCCACATCTGAGAAATCCAAGTTCATAGATGACCC...AGTGGAAAGAACATTATATTTTCTAACTGCACTTGTGTGGGATTTGCAGCCCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135562.8 |
||
| CDS-3UTR CAA 90 bp | GTCAAAAGCAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGATGACAAAGTTGGCTTaGGAAGAAGACTGCCCATAC | + |
|
Preference number: 5 (lower is better) Translates to: VKSKAGIPLEAERNCTLKMTKLA*EEDCPY Trigger: GTATGGGCAGTCTTCTTCCAAAGCCAACTTTGTCAT...CTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTGCTTTTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000203140.2 ENSMUST00000205214.3 |
||
| CDS-3UTR CAA 90 bp | CAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTTGACATGGGCTCCCATTTaGAGTCTGAACATTTACATC | + |
|
Preference number: 5 (lower is better) Translates to: QSRHTFGSRKELHIEALLTWAPI*SLNIYI Trigger: GATGTAAATGTTCAGACTCAAAATGGGAGCCCATGT...CAAAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032362.12 ENSMUST00000203140.2 ENSMUST00000205214.3 |
||
| CDS-3UTR CAA 90 bp | AGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTTGATTATGGCGCATGTCTCCTTTTaGATGCTTGAAGACATCCCT | + |
|
Preference number: 5 (lower is better) Translates to: RHTFGSRKELHIEALLIMAHVSF*MLEDIP Trigger: AGGGATGTCTTCAAGCATCAAAAAGGAGACATGCGC...CATAATCAAAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032362.12 ENSMUST00000205214.3 |
||
| CDS-3UTR CAA 90 bp | AGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTTGATTATGGGGTCATCTATGAACTaGGATTTCTCAGATGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RHTFGSRKELHIEALLIMGSSMN*DFSDVE Trigger: CTCCACATCTGAGAAATCCAAGTTCATAGATGACCC...CATAATCAAAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000203140.2 ENSMUST00000205214.3 |
||
| CDS-3UTR CAA 90 bp | TTTCTGTATCAGTTCAAGGAGGAGCTAAATCTGAAAGATCTCCTTAGGAAATACGCCACTGCAGGAATGTaGATGAGCCCAATGACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: FLYQFKEELNLKDLLRKYATAGM*MSPMTK Trigger: CTTTGTCATTGGGCTCATCAACATTCCTGCAGTGGC...GTATTTCCTAAGGAGATCTTTCAGATTTAGCTCCTCCTTGAACTGATACAGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032362.12 ENSMUST00000203140.2 |
||
| CDS-3UTR CAA 90 bp | CAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTTGTTCTTAAATCCCCATTaGAGGCATGAAGTGTCAATC | + |
|
Preference number: 5 (lower is better) Translates to: QSRHTFGSRKELHIEALLFLNPH*RHEVSI Trigger: GATTGACACTTCATGCCTCAAATGGGGATTTAAGAA...CAAAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032362.12 ENSMUST00000203140.2 ENSMUST00000205214.3 |
||
| CDS-3UTR CAA 90 bp | TTTCTGTATCAGTTCAAGGAGGAGCTAAATCTGAAAGATCTCCTTAGGAAATACAGCCCAATGACAAAGTaGGCTTTGGAAGAAGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: FLYQFKEELNLKDLLRKYSPMTK*ALEEDC Trigger: GCAGTCTTCTTCCAAAGCCAACTTTGTCATTGGGCT...GTATTTCCTAAGGAGATCTTTCAGATTTAGCTCCTCCTTGAACTGATACAGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032362.12 ENSMUST00000203140.2 |
||
| CDS-3UTR CAA 90 bp | AGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTTGATTATGACATGGGCTCCCATTTaGAGTCTGAACATTTACATC | + |
|
Preference number: 5 (lower is better) Translates to: RHTFGSRKELHIEALLIMTWAPI*SLNIYI Trigger: GATGTAAATGTTCAGACTCAAAATGGGAGCCCATGT...CATAATCAAAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032362.12 ENSMUST00000203140.2 ENSMUST00000205214.3 |
||
| CDS-3UTR CAA 90 bp | GTCAAAAGCAAAGCAGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGAGCAAAAGACTTAAGTaGTGGTTGAATGCACCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: VKSKAGIPLEAERNCTLKSKRLK*WLNAPQ Trigger: TTGAGGTGCATTCAACCACAACTTAAGTCTTTTGCT...CTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCTGCTTTGCTTTTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032362.12 ENSMUST00000203140.2 ENSMUST00000205214.3 |
||
| CDS-3UTR CAA 90 bp | CCATCCCCAGGAACACATATCACATATCAATGGAGACAATATAGCATGAAGCAGTATCAACATACAGTTTaGCGCATAATGAGCCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: PSPGTHITYQWRQYSMKQYQHTV*RIMSPK Trigger: TTTTGGGCTCATTATGCGCAAAACTGTATGTTGATA...CTGCTTCATGCTATATTGTCTCCATTGATATGTGATATGTGTTCCTGGGGATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032362.12 ENSMUST00000203140.2 |
||
| CDS-3UTR CAA 90 bp | TTTCTGTATCAGTTCAAGGAGGAGCTAAATCTGAAAGATCTCCTTAGGAAATACGGGTCATCTATGAACTaGGATTTCTCAGATGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: FLYQFKEELNLKDLLRKYGSSMN*DFSDVE Trigger: CTCCACATCTGAGAAATCCAAGTTCATAGATGACCC...GTATTTCCTAAGGAGATCTTTCAGATTTAGCTCCTCCTTGAACTGATACAGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032362.12 ENSMUST00000203140.2 |
||
| CDS-3UTR CAA 90 bp | CATGTCATAATCAAACATAATAGACAGCCATCCCCAGGAACACATATCACATATGGTTGCGCTGAATTTTaGTGGAACAAATGGGCATTT | + |
|
Preference number: 5 (lower is better) Translates to: HVIIKHNRQPSPGTHITYGCAEF*WNKWAF Trigger: AAATGCCCATTTGTTCCACAAAAATTCAGCGCAACC...ATATGTGATATGTGTTCCTGGGGATGGCTGTCTATTATGTTTGATTATGACATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032362.12 |
||
| CDS-3UTR CAA 90 bp | AGGCATACCTTTGGAAGCAGAAAGGAATTGCACATTGAAGCCCTTTTGATTATGTATCAACATACAGTTTaGCGCATAATGAGCCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: RHTFGSRKELHIEALLIMYQHTV*RIMSPK Trigger: TTTTGGGCTCATTATGCGCAAAACTGTATGTTGATA...CATAATCAAAAGGGCTTCAATGTGCAATTCCTTTCTGCTTCCAAAGGTATGCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000203140.2 ENSMUST00000205214.3 |
||
| CDS-3UTR CAA 90 bp | CATGTCATAATCAAACATAATAGACAGCCATCCCCAGGAACACATATCACATATTTCTTAAATCCCCATTaGAGGCATGAAGTGTCAATC | + |
|
Preference number: 5 (lower is better) Translates to: HVIIKHNRQPSPGTHITYFLNPH*RHEVSI Trigger: GATTGACACTTCATGCCTCAAATGGGGATTTAAGAA...ATATGTGATATGTGTTCCTGGGGATGGCTGTCTATTATGTTTGATTATGACATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032362.12 ENSMUST00000203140.2 |
||
| CDS CCA 72 bp | CAGGGCACCCAAGAACACCTTGAGTTTTCCACAGCATaGCCGCGCTTCCTCTGTGGACGGATATCCGACTGT | + |
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Preference number: 6 (lower is better) Translates to: QGTQEHLEFSTA*PRFLCGRISDC Trigger: ACAGTCGGATATCCGTCCACAGAGGAAGCGCGGCCATGCTGTGGAAAACTCAAGGTGTTCTTGGGTGCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000205214.3 |
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| CDS TCA 72 bp | CAAAGTAAACAAACGACAGGGCACCCAAGAACACCTTaGGTTTTCCACAGCATGGCCGCGCTTCCTCTGTGG | + |
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Preference number: 6 (lower is better) Translates to: QSKQTTGHPRTP*VFHSMAALPLW Trigger: CCACAGAGGAAGCGCGGCCATGCTGTGGAAAACTCAAGGTGTTCTTGGGTGCCCTGTCGTTTGTTTACTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000205214.3 |
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| CDS GCA 72 bp | CTGAGTCACGGTGCTCTTCAGATAGCCTTCTGCCAATaGTTTGGCAAAGTAAACAAACGACAGGGCACCCAA | + |
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Preference number: 6 (lower is better) Translates to: LSHGALQIAFCQ*FGKVNKRQGTQ Trigger: TTGGGTGCCCTGTCGTTTGTTTACTTTGCCAAAGCATTGGCAGAAGGCTATCTGAAGAGCACCGTGACTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000205214.3 |
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| CDS GCA 72 bp | CTCTATCTGAGTCACGGTGCTCTTCAGATAGCCTTCTaGCAATGCTTTGGCAAAGTAAACAAACGACAGGGC | + |
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Preference number: 6 (lower is better) Translates to: LYLSHGALQIAF*QCFGKVNKRQG Trigger: GCCCTGTCGTTTGTTTACTTTGCCAAAGCATTGGCAGAAGGCTATCTGAAGAGCACCGTGACTCAGATAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000205214.3 |
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| CDS CCA 72 bp | TCACGGTGCTCTTCAGATAGCCTTCTGCCAATGCTTTaGCAAAGTAAACAAACGACAGGGCACCCAAGAACA | + |
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Preference number: 6 (lower is better) Translates to: SRCSSDSLLPML*QSKQTTGHPRT Trigger: TGTTCTTGGGTGCCCTGTCGTTTGTTTACTTTGCCAAAGCATTGGCAGAAGGCTATCTGAAGAGCACCGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000205214.3 |
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| CDS GCA 72 bp | AAGGGATCTCAAACCTTCTCTCTATCTGAGTCACGGTaGTCTTCAGATAGCCTTCTGCCAATGCTTTGGCAA | + |
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Preference number: 6 (lower is better) Translates to: KGSQTFSLSESR*SSDSLLPMLWQ Trigger: TTGCCAAAGCATTGGCAGAAGGCTATCTGAAGAGCACCGTGACTCAGATAGAGAGAAGGTTTGAGATCCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032362.12 ENSMUST00000135562.8 ENSMUST00000205214.3 |
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