Pregenerated sensors for SLCO1A6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079262Ensembl transcript IDs: ENSMUST00000111827.4
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | AAGTCCAGGGTGGGGGTCACCATTAAAGTCTTCACTAGGAAAATCTTAAGTGCTTCTTGGCAAAGCACCTaGCCCTGTGGATTCCAACCC | + |
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Preference number: 4 (lower is better) Translates to: KSRVGVTIKVFTRKILSASWQST*PCGFQP Trigger: GGGTTGGAATCCACAGGGTCAGGTGCTTTGCCAAGA...AGCACTTAAGATTTTCCTAGTGAAGACTTTAATGGTGACCCCCACCCTGGACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS-3UTR CCA 90 bp | AAGTCCAGGGTGGGGGTCACCATTAAAGTCTTCACTAGGAAAATCTTAAGTGCTGGTCCTGCATGCTCCTaGCTCACCACATTTCAGAGT | + |
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Preference number: 4 (lower is better) Translates to: KSRVGVTIKVFTRKILSAGPACS*LTTFQS Trigger: ACTCTGAAATGTGGTGAGCCAGGAGCATGCAGGACC...AGCACTTAAGATTTTCCTAGTGAAGACTTTAATGGTGACCCCCACCCTGGACTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS-3UTR CCA 90 bp | AAGTCCAGGGTGGGGGTCACCATTAAAGTCTTCACTAGGAAAATCTTAAGTGCTAAGCACCTGACCCTGTaGATTCCAACCCTTTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: KSRVGVTIKVFTRKILSAKHLTL*IPTLFP Trigger: TGGGAAAAGGGTTGGAATCCACAGGGTCAGGTGCTT...AGCACTTAAGATTTTCCTAGTGAAGACTTTAATGGTGACCCCCACCCTGGACTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS-3UTR TCA 90 bp | AAGTCCAGGGTGGGGGTCACCATTAAAGTCTTCACTAGGAAAATCTTAAGTGCTTGCAAGTTCAATTTCTaGAGAGTCAGTGTCCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: KSRVGVTIKVFTRKILSACKFNF*RVSVPR Trigger: CCTGGGGACACTGACTCTTCAGAAATTGAACTTGCA...AGCACTTAAGATTTTCCTAGTGAAGACTTTAATGGTGACCCCCACCCTGGACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS-3UTR GCA 90 bp | AAGTCCAGGGTGGGGGTCACCATTAAAGTCTTCACTAGGAAAATCTTAAGTGCTACCAATGAGGAAGACTaGCTTTGCTGTGGAGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: KSRVGVTIKVFTRKILSATNEED*LCCGDS Trigger: GGAATCTCCACAGCAAAGGCAGTCTTCCTCATTGGT...AGCACTTAAGATTTTCCTAGTGAAGACTTTAATGGTGACCCCCACCCTGGACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS-3UTR GCA 90 bp | AAGTCCAGGGTGGGGGTCACCATTAAAGTCTTCACTAGGAAAATCTTAAGTGCTTTCATAGGTCCTGCATaGTCCTGGCTCACCACATTT | + |
|
Preference number: 4 (lower is better) Translates to: KSRVGVTIKVFTRKILSAFIGPA*SWLTTF Trigger: AAATGTGGTGAGCCAGGAGCATGCAGGACCTATGAA...AGCACTTAAGATTTTCCTAGTGAAGACTTTAATGGTGACCCCCACCCTGGACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS-3UTR CCA 90 bp | AAGTCCAGGGTGGGGGTCACCATTAAAGTCTTCACTAGGAAAATCTTAAGTGCTCTTGGTTTTCCTCCTTaGCCTTGTCTCTGTGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: KSRVGVTIKVFTRKILSALGFPP*PCLCAS Trigger: AGAAGCACAGAGACAAGGCCAAGGAGGAAAACCAAG...AGCACTTAAGATTTTCCTAGTGAAGACTTTAATGGTGACCCCCACCCTGGACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS-3UTR CCA 90 bp | AAGTCCAGGGTGGGGGTCACCATTAAAGTCTTCACTAGGAAAATCTTAAGTGCTGCAACTCCATTTACCTaGAGCACACTTGTAAGGACG | + |
|
Preference number: 4 (lower is better) Translates to: KSRVGVTIKVFTRKILSAATPFT*STLVRT Trigger: CGTCCTTACAAGTGTGCTCCAGGTAAATGGAGTTGC...AGCACTTAAGATTTTCCTAGTGAAGACTTTAATGGTGACCCCCACCCTGGACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS-3UTR CCA 90 bp | AAGTCCAGGGTGGGGGTCACCATTAAAGTCTTCACTAGGAAAATCTTAAGTGCTCACTTTCCTTCTCTGTaGGCTTCGTCTCTGCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: KSRVGVTIKVFTRKILSAHFPSL*ASSLQV Trigger: AACTTGCAGAGACGAAGCCCACAGAGAAGGAAAGTG...AGCACTTAAGATTTTCCTAGTGAAGACTTTAATGGTGACCCCCACCCTGGACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS-3UTR TCA 90 bp | AAGTCCAGGGTGGGGGTCACCATTAAAGTCTTCACTAGGAAAATCTTAAGTGCTTGGTATAAAGACCAATaGGGAAGACTGCCTTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KSRVGVTIKVFTRKILSAWYKDQ*GRLPLL Trigger: CAGCAAAGGCAGTCTTCCTCATTGGTCTTTATACCA...AGCACTTAAGATTTTCCTAGTGAAGACTTTAATGGTGACCCCCACCCTGGACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS-3UTR TCA 90 bp | AAGTCCAGGGTGGGGGTCACCATTAAAGTCTTCACTAGGAAAATCTTAAGTGCTATGCAGCTGCAATTTTaGAACACCATGTTGGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KSRVGVTIKVFTRKILSAMQLQF*NTMLAP Trigger: AGGAGCCAACATGGTGTTTCAAAATTGCAGCTGCAT...AGCACTTAAGATTTTCCTAGTGAAGACTTTAATGGTGACCCCCACCCTGGACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS-3UTR GCA 90 bp | AAGTCCAGGGTGGGGGTCACCATTAAAGTCTTCACTAGGAAAATCTTAAGTGCTCAGGACATTCACTCCTaGACAGACCAAAAAGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: KSRVGVTIKVFTRKILSAQDIHS*TDQKAN Trigger: ATTGGCTTTTTGGTCTGTGCAGGAGTGAATGTCCTG...AGCACTTAAGATTTTCCTAGTGAAGACTTTAATGGTGACCCCCACCCTGGACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS-3UTR GCA 90 bp | AAGTCCAGGGTGGGGGTCACCATTAAAGTCTTCACTAGGAAAATCTTAAGTGCTAGAAGAAAAAGGGGATaGTGGTCAGGACATTCACTC | + |
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Preference number: 4 (lower is better) Translates to: KSRVGVTIKVFTRKILSARRKRG*WSGHSL Trigger: GAGTGAATGTCCTGACCAGCATCCCCTTTTTCTTCT...AGCACTTAAGATTTTCCTAGTGAAGACTTTAATGGTGACCCCCACCCTGGACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS-3UTR GCA 90 bp | AAGTCCAGGGTGGGGGTCACCATTAAAGTCTTCACTAGGAAAATCTTAAGTGCTTTGGCCTTGTCTCTGTaGTTCTCCTCTTTGGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: KSRVGVTIKVFTRKILSALALSL*FSSLAF Trigger: AAATGCCAAAGAGGAGAAGCACAGAGACAAGGCCAA...AGCACTTAAGATTTTCCTAGTGAAGACTTTAATGGTGACCCCCACCCTGGACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS-3UTR GCA 90 bp | AAGTCCAGGGTGGGGGTCACCATTAAAGTCTTCACTAGGAAAATCTTAAGTGCTGAGGAAGACTGCCTTTaGTGTGGAGATTCCAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: KSRVGVTIKVFTRKILSAEEDCL*CGDSKM Trigger: CATTTTGGAATCTCCACAGCAAAGGCAGTCTTCCTC...AGCACTTAAGATTTTCCTAGTGAAGACTTTAATGGTGACCCCCACCCTGGACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS-3UTR CCA 90 bp | AAGTCCAGGGTGGGGGTCACCATTAAAGTCTTCACTAGGAAAATCTTAAGTGCTTGTGCTTCTCCTCTTTaGCATTTTCAGTTCCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: KSRVGVTIKVFTRKILSACASPL*HFQFHP Trigger: GGGATGGAACTGAAAATGCCAAAGAGGAGAAGCACA...AGCACTTAAGATTTTCCTAGTGAAGACTTTAATGGTGACCCCCACCCTGGACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS-3UTR CCA 90 bp | AAGTCCAGGGTGGGGGTCACCATTAAAGTCTTCACTAGGAAAATCTTAAGTGCTGTGTCCCCAGGGATTTaGAGTTTCCTGATAAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KSRVGVTIKVFTRKILSAVSPGI*SFLISL Trigger: AAGACTTATCAGGAAACTCCAAATCCCTGGGGACAC...AGCACTTAAGATTTTCCTAGTGAAGACTTTAATGGTGACCCCCACCCTGGACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS-3UTR TCA 90 bp | AAGTCCAGGGTGGGGGTCACCATTAAAGTCTTCACTAGGAAAATCTTAAGTGCTACACAAAAAGCTGTTTaGGGACAAGTTGCTTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: KSRVGVTIKVFTRKILSATQKAV*GQVACR Trigger: CCTACAAGCAACTTGTCCTCAAACAGCTTTTTGTGT...AGCACTTAAGATTTTCCTAGTGAAGACTTTAATGGTGACCCCCACCCTGGACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS-3UTR TCA 90 bp | AAGTCCAGGGTGGGGGTCACCATTAAAGTCTTCACTAGGAAAATCTTAAGTGCTGTGGAGATTCCAAAATaGTGTTCCAGGTATTTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KSRVGVTIKVFTRKILSAVEIPK*CSRYLG Trigger: GCCTAAATACCTGGAACATCATTTTGGAATCTCCAC...AGCACTTAAGATTTTCCTAGTGAAGACTTTAATGGTGACCCCCACCCTGGACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS-3UTR GCA 90 bp | AAGTCCAGGGTGGGGGTCACCATTAAAGTCTTCACTAGGAAAATCTTAAGTGCTTTTTGTGCATGTCTGTaGACTCACTTTCCTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KSRVGVTIKVFTRKILSAFCACL*THFPSL Trigger: CAGAGAAGGAAAGTGAGTGCACAGACATGCACAAAA...AGCACTTAAGATTTTCCTAGTGAAGACTTTAATGGTGACCCCCACCCTGGACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS-3UTR CCA 90 bp | AAGTCCAGGGTGGGGGTCACCATTAAAGTCTTCACTAGGAAAATCTTAAGTGCTTTTGAAACACCATGTTaGCTCCTGTTCCAACAGACT | + |
|
Preference number: 4 (lower is better) Translates to: KSRVGVTIKVFTRKILSAFETPC*LLFQQT Trigger: AGTCTGTTGGAACAGGAGCCAACATGGTGTTTCAAA...AGCACTTAAGATTTTCCTAGTGAAGACTTTAATGGTGACCCCCACCCTGGACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS-3UTR TCA 90 bp | AAGTCCAGGGTGGGGGTCACCATTAAAGTCTTCACTAGGAAAATCTTAAGTGCTCTGCCCATGAGGAAATaGGGTAGTGATATTATGAAA | + |
|
Preference number: 4 (lower is better) Translates to: KSRVGVTIKVFTRKILSALPMRK*GSDIMK Trigger: TTTCATAATATCACTACCTCATTTCCTCATGGGCAG...AGCACTTAAGATTTTCCTAGTGAAGACTTTAATGGTGACCCCCACCCTGGACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS-3UTR TCA 90 bp | AAGTCCAGGGTGGGGGTCACCATTAAAGTCTTCACTAGGAAAATCTTAAGTGCTAAATACCTAAAGGCATaGTGGGAGTTTCACCAATTC | + |
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Preference number: 4 (lower is better) Translates to: KSRVGVTIKVFTRKILSAKYLKA*WEFHQF Trigger: GAATTGGTGAAACTCCCATCATGCCTTTAGGTATTT...AGCACTTAAGATTTTCCTAGTGAAGACTTTAATGGTGACCCCCACCCTGGACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS-3UTR TCA 90 bp | AAGTCCAGGGTGGGGGTCACCATTAAAGTCTTCACTAGGAAAATCTTAAGTGCTAGAATGAAGGAAGAATaGTTGATCCTCTTAGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: KSRVGVTIKVFTRKILSARMKEE*LILLEL Trigger: CAGCTCTAAGAGGATCAATCATTCTTCCTTCATTCT...AGCACTTAAGATTTTCCTAGTGAAGACTTTAATGGTGACCCCCACCCTGGACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS-3UTR GCA 90 bp | AAGTCCAGGGTGGGGGTCACCATTAAAGTCTTCACTAGGAAAATCTTAAGTGCTATGACCGAATGCAGCTaGAATTTTGAAACACCATGT | + |
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Preference number: 4 (lower is better) Translates to: KSRVGVTIKVFTRKILSAMTECS*NFETPC Trigger: ACATGGTGTTTCAAAATTGCAGCTGCATTCGGTCAT...AGCACTTAAGATTTTCCTAGTGAAGACTTTAATGGTGACCCCCACCCTGGACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS-3UTR GCA 90 bp | AAGTCCAGGGTGGGGGTCACCATTAAAGTCTTCACTAGGAAAATCTTAAGTGCTTTCCTGATGACCGAATaGAGCTGCAATTTTGAAACA | + |
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Preference number: 4 (lower is better) Translates to: KSRVGVTIKVFTRKILSAFLMTE*SCNFET Trigger: TGTTTCAAAATTGCAGCTGCATTCGGTCATCAGGAA...AGCACTTAAGATTTTCCTAGTGAAGACTTTAATGGTGACCCCCACCCTGGACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS-3UTR CCA 90 bp | AAGTCCAGGGTGGGGGTCACCATTAAAGTCTTCACTAGGAAAATCTTAAGTGCTTCTTTAATGATTCCTTaGTTTTCCTCCTTGGCCTTG | + |
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Preference number: 4 (lower is better) Translates to: KSRVGVTIKVFTRKILSASLMIP*FSSLAL Trigger: CAAGGCCAAGGAGGAAAACCAAGGAATCATTAAAGA...AGCACTTAAGATTTTCCTAGTGAAGACTTTAATGGTGACCCCCACCCTGGACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS-3UTR CCA 90 bp | AAGTCCAGGGTGGGGGTCACCATTAAAGTCTTCACTAGGAAAATCTTAAGTGCTAGACTGCCTTTGCTGTaGAGATTCCAAAATGATGTT | + |
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Preference number: 4 (lower is better) Translates to: KSRVGVTIKVFTRKILSARLPLL*RFQNDV Trigger: AACATCATTTTGGAATCTCCACAGCAAAGGCAGTCT...AGCACTTAAGATTTTCCTAGTGAAGACTTTAATGGTGACCCCCACCCTGGACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS-3UTR TCA 90 bp | AAGTCCAGGGTGGGGGTCACCATTAAAGTCTTCACTAGGAAAATCTTAAGTGCTCAGCAAATAGTCTCATaGAAAATGCCTGTAATCCAA | + |
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Preference number: 4 (lower is better) Translates to: KSRVGVTIKVFTRKILSAQQIVS*KMPVIQ Trigger: TTGGATTACAGGCATTTTTCATGAGACTATTTGCTG...AGCACTTAAGATTTTCCTAGTGAAGACTTTAATGGTGACCCCCACCCTGGACTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS-3UTR GCA 90 bp | AAGTCCAGGGTGGGGGTCACCATTAAAGTCTTCACTAGGAAAATCTTAAGTGCTGTCTACATAAATGTTTaGACAGAAAGGTCCCATCAA | + |
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Preference number: 4 (lower is better) Translates to: KSRVGVTIKVFTRKILSAVYINV*TERSHQ Trigger: TTGATGGGACCTTTCTGTGCAAACATTTATGTAGAC...AGCACTTAAGATTTTCCTAGTGAAGACTTTAATGGTGACCCCCACCCTGGACTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS-3UTR GCA 90 bp | AAGTCCAGGGTGGGGGTCACCATTAAAGTCTTCACTAGGAAAATCTTAAGTGCTGCAAAGTGCTATGATTaGAGCTTTCTTGAGAGTAAT | + |
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Preference number: 4 (lower is better) Translates to: KSRVGVTIKVFTRKILSAAKCYD*SFLESN Trigger: ATTACTCTCAAGAAAGCTGCAATCATAGCACTTTGC...AGCACTTAAGATTTTCCTAGTGAAGACTTTAATGGTGACCCCCACCCTGGACTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS-3UTR GCA 90 bp | AAGTCCAGGGTGGGGGTCACCATTAAAGTCTTCACTAGGAAAATCTTAAGTGCTAGTTACACCTTGTGTTaGAGTCAGAAAGAAACTTAT | + |
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Preference number: 4 (lower is better) Translates to: KSRVGVTIKVFTRKILSASYTLC*SQKETY Trigger: ATAAGTTTCTTTCTGACTGCAACACAAGGTGTAACT...AGCACTTAAGATTTTCCTAGTGAAGACTTTAATGGTGACCCCCACCCTGGACTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS-3UTR CCA 90 bp | AAGTCCAGGGTGGGGGTCACCATTAAAGTCTTCACTAGGAAAATCTTAAGTGCTTGTAAATCACAATATTaGCAACTCCATTTACCTGGA | + |
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Preference number: 4 (lower is better) Translates to: KSRVGVTIKVFTRKILSACKSQY*QLHLPG Trigger: TCCAGGTAAATGGAGTTGCCAATATTGTGATTTACA...AGCACTTAAGATTTTCCTAGTGAAGACTTTAATGGTGACCCCCACCCTGGACTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS GCA 90 bp | TCTTACACAGCCCCAGGACTGCAGATGAGTTTCCTGATGACCGAATaGAGCTGCAATTTTGAAACACCATGTTGGCTCCTGTTCCAACAG | + |
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Preference number: 5 (lower is better) Translates to: SYTAPGLQMSFLMTE*SCNFETPCWLLFQQ Trigger: CTGTTGGAACAGGAGCCAACATGGTGTTTCAAAATTGCAGCTGCATTCGGTCATCAGGAAACTCATCTGCAGTCCTGGGGCTGTGTAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS CCA 90 bp | AGCCAATCCACCAAGCACCGACCCAGCGTGTATCAGTGGGAGTTATaGTCAGGTCATCTGTATTCACAGACCCTGTGTCTACATAAATGT | + |
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Preference number: 5 (lower is better) Translates to: SQSTKHRPSVYQWEL*SGHLYSQTLCLHKC Trigger: ACATTTATGTAGACACAGGGTCTGTGAATACAGATGACCTGACCATAACTCCCACTGATACACGCTGGGTCGGTGCTTGGTGGATTGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS GCA 90 bp | ACAGCCCCAGGACTGCAGATGAGTTTCCTGATGACCGAATGCAGCTaGAATTTTGAAACACCATGTTGGCTCCTGTTCCAACAGACTTTT | + |
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Preference number: 5 (lower is better) Translates to: TAPGLQMSFLMTECS*NFETPCWLLFQQTF Trigger: AAAAGTCTGTTGGAACAGGAGCCAACATGGTGTTTCAAAATTGCAGCTGCATTCGGTCATCAGGAAACTCATCTGCAGTCCTGGGGCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS CCA 90 bp | AGTTTCCTGATGACCGAATGCAGCTGCAATTTTGAAACACCATGTTaGCTCCTGTTCCAACAGACTTTTCACAGCCTGCAAGGCAAGGTG | + |
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Preference number: 5 (lower is better) Translates to: SFLMTECSCNFETPC*LLFQQTFHSLQGKV Trigger: CACCTTGCCTTGCAGGCTGTGAAAAGTCTGTTGGAACAGGAGCCAACATGGTGTTTCAAAATTGCAGCTGCATTCGGTCATCAGGAAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS-3UTR CAA 90 bp | AAGTCCAGGGTGGGGGTCACCATTAAAGTCTTCACTAGGAAAATCTTAAGTGCTCCTTGGTTTTCCTCCTaGGCCTTGTCTCTGTGCTTC | + |
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Preference number: 5 (lower is better) Translates to: KSRVGVTIKVFTRKILSAPWFSS*ALSLCF Trigger: GAAGCACAGAGACAAGGCCAAGGAGGAAAACCAAGG...AGCACTTAAGATTTTCCTAGTGAAGACTTTAATGGTGACCCCCACCCTGGACTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS TCA 90 bp | CTCACTTTCCTTCTCTGTGGGCTTCGTCTCTGCAAGTTCAATTTCTaGAGAGTCAGTGTCCCCAGGGATTTGGAGTTTCCTGATAAGTCT | + |
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Preference number: 5 (lower is better) Translates to: LTFLLCGLRLCKFNF*RVSVPRDLEFPDKS Trigger: AGACTTATCAGGAAACTCCAAATCCCTGGGGACACTGACTCTTCAGAAATTGAACTTGCAGAGACGAAGCCCACAGAGAAGGAAAGTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS-3UTR CAA 90 bp | AAGTCCAGGGTGGGGGTCACCATTAAAGTCTTCACTAGGAAAATCTTAAGTGCTAGAAACACCTTGATCTaGGCAAAGCACCTGACCCTG | + |
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Preference number: 5 (lower is better) Translates to: KSRVGVTIKVFTRKILSARNTLI*AKHLTL Trigger: CAGGGTCAGGTGCTTTGCCAAGATCAAGGTGTTTCT...AGCACTTAAGATTTTCCTAGTGAAGACTTTAATGGTGACCCCCACCCTGGACTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS GCA 90 bp | AGCTTAGTTTTCAGTTCTCCATCGTTCTCGACCTTAGAACTTTTGTaGATGTCTGTGCACTCACTTTCCTTCTCTGTGGGCTTCGTCTCT | + |
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Preference number: 5 (lower is better) Translates to: SLVFSSPSFSTLELL*MSVHSLSFSVGFVS Trigger: AGAGACGAAGCCCACAGAGAAGGAAAGTGAGTGCACAGACATGCACAAAAGTTCTAAGGTCGAGAACGATGGAGAACTGAAAACTAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS-3UTR CAA 90 bp | AAGTCCAGGGTGGGGGTCACCATTAAAGTCTTCACTAGGAAAATCTTAAGTGCTAATGCAGCTGCAATTTaGAAACACCATGTTGGCTCC | + |
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Preference number: 5 (lower is better) Translates to: KSRVGVTIKVFTRKILSANAAAI*KHHVGS Trigger: GGAGCCAACATGGTGTTTCAAAATTGCAGCTGCATT...AGCACTTAAGATTTTCCTAGTGAAGACTTTAATGGTGACCCCCACCCTGGACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS-3UTR CAA 90 bp | AAGTCCAGGGTGGGGGTCACCATTAAAGTCTTCACTAGGAAAATCTTAAGTGCTTCGACCTTAGAACTTTaGTGCATGTCTGTGCACTCA | + |
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Preference number: 5 (lower is better) Translates to: KSRVGVTIKVFTRKILSASTLEL*CMSVHS Trigger: TGAGTGCACAGACATGCACAAAAGTTCTAAGGTCGA...AGCACTTAAGATTTTCCTAGTGAAGACTTTAATGGTGACCCCCACCCTGGACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS-3UTR CAA 90 bp | AAGTCCAGGGTGGGGGTCACCATTAAAGTCTTCACTAGGAAAATCTTAAGTGCTCTGGATCCCATGTTTTaGTTAAGCAGTTACACCTTG | + |
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Preference number: 5 (lower is better) Translates to: KSRVGVTIKVFTRKILSALDPMF*LSSYTL Trigger: CAAGGTGTAACTGCTTAACAAAAACATGGGATCCAG...AGCACTTAAGATTTTCCTAGTGAAGACTTTAATGGTGACCCCCACCCTGGACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS GCA 90 bp | GGTCAGGTCATCTGTATTCACAGACCCTGTGTCTACATAAATGTTTaGACAGAAAGGTCCCATCAAATATCCAAGTATTGGGCCAATCAT | + |
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Preference number: 5 (lower is better) Translates to: GQVICIHRPCVYINV*TERSHQISKYWANH Trigger: ATGATTGGCCCAATACTTGGATATTTGATGGGACCTTTCTGTGCAAACATTTATGTAGACACAGGGTCTGTGAATACAGATGACCTGACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS-3UTR CAA 90 bp | AAGTCCAGGGTGGGGGTCACCATTAAAGTCTTCACTAGGAAAATCTTAAGTGCTCTGTTTGAGGACAAGTaGCTTGTAGGTGAAATTGTT | + |
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Preference number: 5 (lower is better) Translates to: KSRVGVTIKVFTRKILSALFEDK*LVGEIV Trigger: AACAATTTCACCTACAAGCAACTTGTCCTCAAACAG...AGCACTTAAGATTTTCCTAGTGAAGACTTTAATGGTGACCCCCACCCTGGACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS-3UTR CAA 90 bp | AAGTCCAGGGTGGGGGTCACCATTAAAGTCTTCACTAGGAAAATCTTAAGTGCTTCAAATATCCAAGTATaGGGCCAATCATCTTCCCAA | + |
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Preference number: 5 (lower is better) Translates to: KSRVGVTIKVFTRKILSASNIQV*GQSSSQ Trigger: TTGGGAAGATGATTGGCCCAATACTTGGATATTTGA...AGCACTTAAGATTTTCCTAGTGAAGACTTTAATGGTGACCCCCACCCTGGACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS-3UTR CAA 90 bp | AAGTCCAGGGTGGGGGTCACCATTAAAGTCTTCACTAGGAAAATCTTAAGTGCTTTCTTTAATGATTCCTaGGTTTTCCTCCTTGGCCTT | + |
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Preference number: 5 (lower is better) Translates to: KSRVGVTIKVFTRKILSAFFNDS*VFLLGL Trigger: AAGGCCAAGGAGGAAAACCAAGGAATCATTAAAGAA...AGCACTTAAGATTTTCCTAGTGAAGACTTTAATGGTGACCCCCACCCTGGACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS CCA 90 bp | GTCTCTGCAAGTTCAATTTCTGAAGAGTCAGTGTCCCCAGGGATTTaGAGTTTCCTGATAAGTCTTAGAATGAAGAATGAAGGAAGAATG | + |
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Preference number: 5 (lower is better) Translates to: VSASSISEESVSPGI*SFLISLRMKNEGRM Trigger: CATTCTTCCTTCATTCTTCATTCTAAGACTTATCAGGAAACTCCAAATCCCTGGGGACACTGACTCTTCAGAAATTGAACTTGCAGAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS-3UTR CAA 90 bp | AAGTCCAGGGTGGGGGTCACCATTAAAGTCTTCACTAGGAAAATCTTAAGTGCTATGATTGCAGCTTTCTaGAGAGTAATCTTCAACTTC | + |
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Preference number: 5 (lower is better) Translates to: KSRVGVTIKVFTRKILSAMIAAF*RVIFNF Trigger: GAAGTTGAAGATTACTCTCAAGAAAGCTGCAATCAT...AGCACTTAAGATTTTCCTAGTGAAGACTTTAATGGTGACCCCCACCCTGGACTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS GCA 72 bp | GAGGCGCCTGAAACTACTGACTTCATAGGTCCTGCATaGTCCTGGCTCACCACATTTCAGAGTTCCCCAATG | + |
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Preference number: 6 (lower is better) Translates to: EAPETTDFIGPA*SWLTTFQSSPM Trigger: CATTGGGGAACTCTGAAATGTGGTGAGCCAGGAGCATGCAGGACCTATGAAGTCAGTAGTTTCAGGCGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS GCA 72 bp | GCCCCAGGACTGCAGATGAGTTTCCTGATGACCGAATaGAGCTGCAATTTTGAAACACCATGTTGGCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: APGLQMSFLMTE*SCNFETPCWLL Trigger: CAGGAGCCAACATGGTGTTTCAAAATTGCAGCTGCATTCGGTCATCAGGAAACTCATCTGCAGTCCTGGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS TCA 72 bp | CTTCTCTGTGGGCTTCGTCTCTGCAAGTTCAATTTCTaGAGAGTCAGTGTCCCCAGGGATTTGGAGTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: LLCGLRLCKFNF*RVSVPRDLEFP Trigger: AGGAAACTCCAAATCCCTGGGGACACTGACTCTTCAGAAATTGAACTTGCAGAGACGAAGCCCACAGAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS CAA 90 bp | TACAGCTTAGTTTTCAGTTCTCCATCGTTCTCGACCTTAGAACTTTaGTGCATGTCTGTGCACTCACTTTCCTTCTCTGTGGGCTTCGTC | + |
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Preference number: 6 (lower is better) Translates to: YSLVFSSPSFSTLEL*CMSVHSLSFSVGFV Trigger: GACGAAGCCCACAGAGAAGGAAAGTGAGTGCACAGACATGCACAAAAGTTCTAAGGTCGAGAACGATGGAGAACTGAAAACTAAGCTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS CCA 72 bp | ATGACCGAATGCAGCTGCAATTTTGAAACACCATGTTaGCTCCTGTTCCAACAGACTTTTCACAGCCTGCAA | + |
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Preference number: 6 (lower is better) Translates to: MTECSCNFETPC*LLFQQTFHSLQ Trigger: TTGCAGGCTGTGAAAAGTCTGTTGGAACAGGAGCCAACATGGTGTTTCAAAATTGCAGCTGCATTCGGTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS CCA 72 bp | ACTTCATACATCTCAGAAAAACCATGTACCCAGGTATaGTTGCTAACGAGTAGAAGAAGCAGCAAAATACCG | + |
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Preference number: 6 (lower is better) Translates to: TSYISEKPCTQV*LLTSRRSSKIP Trigger: CGGTATTTTGCTGCTTCTTCTACTCGTTAGCAACCATACCTGGGTACATGGTTTTTCTGAGATGTATGAAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS CAA 90 bp | ACATGTATGCTAGGCCATTGTTCCCACACACTGGATCCCATGTTTTaGTTAAGCAGTTACACCTTGTGTTGCAGTCAGAAAGAAACTTAT | + |
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Preference number: 6 (lower is better) Translates to: TCMLGHCSHTLDPMF*LSSYTLCCSQKETY Trigger: ATAAGTTTCTTTCTGACTGCAACACAAGGTGTAACTGCTTAACAAAAACATGGGATCCAGTGTGTGGGAACAATGGCCTAGCATACATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS CAA 72 bp | TCATACATCTCAGAAAAACCATGTACCCAGGTATGGTaGCTAACGAGTAGAAGAAGCAGCAAAATACCGTTA | + |
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Preference number: 6 (lower is better) Translates to: SYISEKPCTQVW*LTSRRSSKIPL Trigger: TAACGGTATTTTGCTGCTTCTTCTACTCGTTAGCAACCATACCTGGGTACATGGTTTTTCTGAGATGTATGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS CAA 90 bp | TGTTCCCACACACTGGATCCCATGTTTTTGTTAAGCAGTTACACCTaGTGTTGCAGTCAGAAAGAAACTTATTCTCCATATCAAAAGACT | + |
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Preference number: 6 (lower is better) Translates to: CSHTLDPMFLLSSYT*CCSQKETYSPYQKT Trigger: AGTCTTTTGATATGGAGAATAAGTTTCTTTCTGACTGCAACACAAGGTGTAACTGCTTAACAAAAACATGGGATCCAGTGTGTGGGAACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS TCA 72 bp | ATTGTTGTTTCATATTCGTATCTGCCCATGAGGAAATaGGGTAGTGATATTATGAAACACCCTAGGCCCATA | + |
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Preference number: 6 (lower is better) Translates to: IVVSYSYLPMRK*GSDIMKHPRPI Trigger: TATGGGCCTAGGGTGTTTCATAATATCACTACCTCATTTCCTCATGGGCAGATACGAATATGAAACAACAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS GCA 72 bp | ATCTGTATTCACAGACCCTGTGTCTACATAAATGTTTaGACAGAAAGGTCCCATCAAATATCCAAGTATTGG | + |
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Preference number: 6 (lower is better) Translates to: ICIHRPCVYINV*TERSHQISKYW Trigger: CCAATACTTGGATATTTGATGGGACCTTTCTGTGCAAACATTTATGTAGACACAGGGTCTGTGAATACAGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS CCA 72 bp | AGTTCAATTTCTGAAGAGTCAGTGTCCCCAGGGATTTaGAGTTTCCTGATAAGTCTTAGAATGAAGAATGAA | + |
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Preference number: 6 (lower is better) Translates to: SSISEESVSPGI*SFLISLRMKNE Trigger: TTCATTCTTCATTCTAAGACTTATCAGGAAACTCCAAATCCCTGGGGACACTGACTCTTCAGAAATTGAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS CAA 72 bp | TGTTTGCACAGAAAGGTCCCATCAAATATCCAAGTATaGGGCCAATCATCTTCCCAACTTCTAAAATTCCAA | + |
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Preference number: 6 (lower is better) Translates to: CLHRKVPSNIQV*GQSSSQLLKFQ Trigger: TTGGAATTTTAGAAGTTGGGAAGATGATTGGCCCAATACTTGGATATTTGATGGGACCTTTCTGTGCAAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS CAA 90 bp | CTCACGAATACAATCACCAAAAGGTTACCCATCTCAAAGCTCCCATaGATAAGTCCAACTATAGATGTGGAAATATTGAATTGTCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: LTNTITKRLPISKLP*ISPTIDVEILNCLS Trigger: AGAGAGACAATTCAATATTTCCACATCTATAGTTGGACTTATCAATGGGAGCTTTGAGATGGGTAACCTTTTGGTGATTGTATTCGTGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS CAA 72 bp | ACACTGGATCCCATGTTTTTGTTAAGCAGTTACACCTaGTGTTGCAGTCAGAAAGAAACTTATTCTCCATAT | + |
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Preference number: 6 (lower is better) Translates to: TLDPMFLLSSYT*CCSQKETYSPY Trigger: ATATGGAGAATAAGTTTCTTTCTGACTGCAACACAAGGTGTAACTGCTTAACAAAAACATGGGATCCAGTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS CAA 90 bp | CTACATAAATGTTTGCACAGAAAGGTCCCATCAAATATCCAAGTATaGGGCCAATCATCTTCCCAACTTCTAAAATTCCAATGTATAAAG | + |
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Preference number: 6 (lower is better) Translates to: LHKCLHRKVPSNIQV*GQSSSQLLKFQCIK Trigger: CTTTATACATTGGAATTTTAGAAGTTGGGAAGATGATTGGCCCAATACTTGGATATTTGATGGGACCTTTCTGTGCAAACATTTATGTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS CAA 72 bp | CTCCCATTGATAAGTCCAACTATAGATGTGGAAATATaGAATTGTCTCTCTAATTGTGTGAGCATAGTACTC | + |
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Preference number: 6 (lower is better) Translates to: LPLISPTIDVEI*NCLSNCVSIVL Trigger: GAGTACTATGCTCACACAATTAGAGAGACAATTCAATATTTCCACATCTATAGTTGGACTTATCAATGGGAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS CAA 72 bp | ACAATCACCAAAAGGTTACCCATCTCAAAGCTCCCATaGATAAGTCCAACTATAGATGTGGAAATATTGAAT | + |
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Preference number: 6 (lower is better) Translates to: TITKRLPISKLP*ISPTIDVEILN Trigger: ATTCAATATTTCCACATCTATAGTTGGACTTATCAATGGGAGCTTTGAGATGGGTAACCTTTTGGTGATTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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| CDS CAA 72 bp | GGATCCCATGTTTTTGTTAAGCAGTTACACCTTGTGTaGCAGTCAGAAAGAAACTTATTCTCCATATCAAAA | + |
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Preference number: 6 (lower is better) Translates to: GSHVFVKQLHLV*QSERNLFSISK Trigger: TTTTGATATGGAGAATAAGTTTCTTTCTGACTGCAACACAAGGTGTAACTGCTTAACAAAAACATGGGATCC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111827.4 |
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