Pregenerated sensors for SLCO1A5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063975Ensembl transcript IDs: ENSMUST00000081380.10, ENSMUST00000111825.10, ENSMUST00000128446.2, ENSMUST00000153268.10
Found 158 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGATATGCACACCACAGTGTGGGAGTAAAGAGAAAAGGACAACCTaGAAGCGTGGTTGGTTCTGTCCTTCTGCCATGTTGGTCCCAATG | + |
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Preference number: 1 (lower is better) Translates to: GICTPQCGSKEKRTT*KRGWFCPSAMLVPM Trigger: CATTGGGACCAACATGGCAGAAGGACAGAACCAACCACGCTTTCAGGTTGTCCTTTTCTCTTTACTCCCACACTGTGGTGTGCATATCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 ENSMUST00000153268.10 |
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| 3UTR CCA 90 bp | AGCCAATCCACCAAGCACCGACCCAGCGTGTATCAGTGGGAGTTATaGTCAGGTCATCTGTATTCACAGACCCTGTGTCTACATAAATTC | + |
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Preference number: 1 (lower is better) Translates to: SQSTKHRPSVYQWEL*SGHLYSQTLCLHKF Trigger: GAATTTATGTAGACACAGGGTCTGTGAATACAGATGACCTGACCATAACTCCCACTGATACACGCTGGGTCGGTGCTTGGTGGATTGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
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| 3UTR GCA 90 bp | GTGCACATCTGTGCACTCGCTTTTCTTCACTGTGAGCTTCATGTCTaGAAGTTCAGTTTCAGAAGAGTACATTTCCCCAGGGAGCTGGAA | + |
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Preference number: 1 (lower is better) Translates to: VHICALAFLHCELHV*KFSFRRVHFPRELE Trigger: TTCCAGCTCCCTGGGGAAATGTACTCTTCTGAAACTGAACTTGCAGACATGAAGCTCACAGTGAAGAAAAGCGAGTGCACAGATGTGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
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| 3UTR TCA 90 bp | AGCTTGATCCTCTTAGTGCTGCAGGCAACACTAGATAAATGCGCCTaGAGTTATTTATATTGTACATCCTACAGGCTCCTGGCTCACCAC | + |
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Preference number: 1 (lower is better) Translates to: SLILLVLQATLDKCA*SYLYCTSYRLLAHH Trigger: GTGGTGAGCCAGGAGCCTGTAGGATGTACAATATAAATAACTTCAGGCGCATTTATCTAGTGTTGCCTGCAGCACTAAGAGGATCAAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
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| 3UTR GCA 90 bp | AAGCTCCAAAGTAAATGGGTGCAGGGATGCCAGCGAATATTCTTGTaGAAAATGCGTGTAATCCAATTCCAAGGGACTTCTCTTCAGACT | + |
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Preference number: 1 (lower is better) Translates to: KLQSKWVQGCQRIFL*KMRVIQFQGTSLQT Trigger: AGTCTGAAGAGAAGTCCCTTGGAATTGGATTACACGCATTTTGCACAAGAATATTCGCTGGCATCCCTGCACCCATTTACTTTGGAGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
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| 3UTR CCA 90 bp | TTCCCCAATGTAAGCAGGTTCTGTCTATCAAAGCTCCAAAGTAAATaGGTGCAGGGATGCCAGCGAATATTCTTGTGCAAAATGCGTGTA | + |
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Preference number: 1 (lower is better) Translates to: FPNVSRFCLSKLQSK*VQGCQRIFLCKMRV Trigger: TACACGCATTTTGCACAAGAATATTCGCTGGCATCCCTGCACCCATTTACTTTGGAGCTTTGATAGACAGAACCTGCTTACATTGGGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
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| 3UTR GCA 90 bp | GGTCAGGTCATCTGTATTCACAGACCCTGTGTCTACATAAATTCTTaGACAGAAGGATCCCAACAAAAGTCCAACAATTGGGCCAATCAT | + |
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Preference number: 1 (lower is better) Translates to: GQVICIHRPCVYINS*TEGSQQKSNNWANH Trigger: ATGATTGGCCCAATTGTTGGACTTTTGTTGGGATCCTTCTGTGCAAGAATTTATGTAGACACAGGGTCTGTGAATACAGATGACCTGACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
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| 3UTR GCA 90 bp | AGCAGGTTCTGTCTATCAAAGCTCCAAAGTAAATGGGTGCAGGGATaGCAGCGAATATTCTTGTGCAAAATGCGTGTAATCCAATTCCAA | + |
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Preference number: 1 (lower is better) Translates to: SRFCLSKLQSKWVQG*QRIFLCKMRVIQFQ Trigger: TTGGAATTGGATTACACGCATTTTGCACAAGAATATTCGCTGGCATCCCTGCACCCATTTACTTTGGAGCTTTGATAGACAGAACCTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
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| 3UTR CCA 90 bp | GATGAGAAGCATGTAAATAGGATTGCAGGAGAGGCTCTTCATGAATaGCAGGAAATCTTTAGTGATTCCTCGGTTTTCCTCCTTGGCTTT | + |
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Preference number: 1 (lower is better) Translates to: DEKHVNRIAGEALHE*QEIFSDSSVFLLGF Trigger: AAAGCCAAGGAGGAAAACCGAGGAATCACTAAAGATTTCCTGCCATTCATGAAGAGCCTCTCCTGCAATCCTATTTACATGCTTCTCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
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| 3UTR CAA 90 bp | GACTTCTCACAGCCCGCGAGGCAGGCTGACATGTATGATAGGCCATaGTCTCCACACACTGGATCCCATGTGTTTGTTAAGCAGCTACAC | + |
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Preference number: 2 (lower is better) Translates to: DFSQPARQADMYDRP*SPHTGSHVFVKQLH Trigger: GTGTAGCTGCTTAACAAACACATGGGATCCAGTGTGTGGAGACAATGGCCTATCATACATGTCAGCCTGCCTCGCGGGCTGTGAGAAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
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| 3UTR-3UTR GCA 90 bp | GTTCCCATTCCAACAGACTTCTCACAGCCCGCGAGGCAGGCTGACATGTATGATTTCTGTTCAGGGCCTTaGATAGGCCAGGAGAAGATT | + |
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Preference number: 2 (lower is better) Translates to: VPIPTDFSQPARQADMYDFCSGP*IGQEKI Trigger: AATCTTCTCCTGGCCTATGCAAGGCCCTGAACAGAA...ATCATACATGTCAGCCTGCCTCGCGGGCTGTGAGAAGTCTGTTGGAATGGGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
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| 3UTR-3UTR CCA 90 bp | CTACAGGCTCCTGGCTCACCACATTTCAGAGTTCCCCAATGTAAGCAGGTTCTGGACAACCTGAAAGCGTaGTTGGTTCTGTCCTTCTGC | + |
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Preference number: 2 (lower is better) Translates to: LQAPGSPHFRVPQCKQVLDNLKA*LVLSFC Trigger: GCAGAAGGACAGAACCAACCACGCTTTCAGGTTGTC...CAGAACCTGCTTACATTGGGGAACTCTGAAATGTGGTGAGCCAGGAGCCTGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
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| 3UTR-3UTR CCA 90 bp | TATGTGACTAGAATGAGTGAGCACCAGAGGCCTCCTGAGGATGAGACAGTGACTGACAACCTGAAAGCGTaGTTGGTTCTGTCCTTCTGC | + |
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Preference number: 2 (lower is better) Translates to: YVTRMSEHQRPPEDETVTDNLKA*LVLSFC Trigger: GCAGAAGGACAGAACCAACCACGCTTTCAGGTTGTC...AGTCACTGTCTCATCCTCAGGAGGCCTCTGGTGCTCACTCATTCTAGTCACATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 ENSMUST00000153268.10 |
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| 3UTR-3UTR GCA 90 bp | TATGTGACTAGAATGAGTGAGCACCAGAGGCCTCCTGAGGATGAGACAGTGACTTTCTGTTCAGGGCCTTaGATAGGCCAGGAGAAGATT | + |
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Preference number: 2 (lower is better) Translates to: YVTRMSEHQRPPEDETVTFCSGP*IGQEKI Trigger: AATCTTCTCCTGGCCTATGCAAGGCCCTGAACAGAA...AGTCACTGTCTCATCCTCAGGAGGCCTCTGGTGCTCACTCATTCTAGTCACATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 ENSMUST00000153268.10 |
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| 3UTR-3UTR GCA 90 bp | AGTCAGCAAGGACCTTGTTCTCCACATATAGAGGGTGCTGAACTCCTTCATAAGGTTTGGGGTGGGATATaGACACCACAGTGTGGGAGT | + |
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Preference number: 2 (lower is better) Translates to: SQQGPCSPHIEGAELLHKVWGGI*TPQCGS Trigger: ACTCCCACACTGTGGTGTGCATATCCCACCCCAAAC...CTTATGAAGGAGTTCAGCACCCTCTATATGTGGAGAACAAGGTCCTTGCTGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
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| 3UTR-3UTR CCA 90 bp | TATGTGACTAGAATGAGTGAGCACCAGAGGCCTCCTGAGGATGAGACAGTGACTTTTGTTTGTTTGGGGTaGGATATGCACACCACAGTG | + |
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Preference number: 2 (lower is better) Translates to: YVTRMSEHQRPPEDETVTFVCLG*DMHTTV Trigger: CACTGTGGTGTGCATATCCCACCCCAAACAAACAAA...AGTCACTGTCTCATCCTCAGGAGGCCTCTGGTGCTCACTCATTCTAGTCACATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 ENSMUST00000153268.10 |
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| 3UTR CAA 90 bp | ACATGTATGATAGGCCATTGTCTCCACACACTGGATCCCATGTGTTaGTTAAGCAGCTACACCTTGTGTTGCAGTCAGCAAGGACCTTGT | + |
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Preference number: 2 (lower is better) Translates to: TCMIGHCLHTLDPMC*LSSYTLCCSQQGPC Trigger: ACAAGGTCCTTGCTGACTGCAACACAAGGTGTAGCTGCTTAACAAACACATGGGATCCAGTGTGTGGAGACAATGGCCTATCATACATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
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| 3UTR-3UTR GCA 90 bp | CTCGACCTTAGGAATTCTGTGCACATCTGTGCACTCGCTTTTCTTCACTGTGAGAAAGGAAGTGCAATGTaGATTCTGTTCAGGGCCTTG | + |
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Preference number: 2 (lower is better) Translates to: LDLRNSVHICALAFLHCEKGSAM*ILFRAL Trigger: CAAGGCCCTGAACAGAATGCACATTGCACTTCCTTT...CTCACAGTGAAGAAAAGCGAGTGCACAGATGTGCACAGAATTCCTAAGGTCGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
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| 3UTR-3UTR CCA 90 bp | TATGTGACTAGAATGAGTGAGCACCAGAGGCCTCCTGAGGATGAGACAGTGACTATTGCGACATTTAGGTaGCCCCTCTTCAAAGGTTTT | + |
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Preference number: 2 (lower is better) Translates to: YVTRMSEHQRPPEDETVTIATFR*PLFKGF Trigger: AAAACCTTTGAAGAGGGGCCACCTAAATGTCGCAAT...AGTCACTGTCTCATCCTCAGGAGGCCTCTGGTGCTCACTCATTCTAGTCACATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 ENSMUST00000153268.10 |
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| 3UTR-3UTR CCA 90 bp | GCACTCGCTTTTCTTCACTGTGAGCTTCATGTCTGCAAGTTCAGTTTCAGAAGACATCCTACAGGCTCCTaGCTCACCACATTTCAGAGT | + |
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Preference number: 2 (lower is better) Translates to: ALAFLHCELHVCKFSFRRHPTGS*LTTFQS Trigger: ACTCTGAAATGTGGTGAGCCAGGAGCCTGTAGGATG...TCTTCTGAAACTGAACTTGCAGACATGAAGCTCACAGTGAAGAAAAGCGAGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
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| 3UTR-3UTR GCA 90 bp | AATTTTGAAACACCATGTGGGTTCCCATTCCAACAGACTTCTCACAGCCCGCGAAGAAGAAAAAGGGGATaGTGGTCAGGATATTCACTC | + |
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Preference number: 2 (lower is better) Translates to: NFETPCGFPFQQTSHSPRRRKRG*WSGYSL Trigger: GAGTGAATATCCTGACCAGCATCCCCTTTTTCTTCT...TCGCGGGCTGTGAGAAGTCTGTTGGAATGGGAACCCACATGGTGTTTCAAAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
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| 3UTR-3UTR GCA 90 bp | CATGTCTGCAAGTTCAGTTTCAGAAGAGTACATTTCCCCAGGGAGCTGGAATTTAGCTACACCTTGTGTTaGAGTCAGCAAGGACCTTGT | + |
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Preference number: 2 (lower is better) Translates to: HVCKFSFRRVHFPRELEFSYTLC*SQQGPC Trigger: ACAAGGTCCTTGCTGACTGCAACACAAGGTGTAGCT...AAATTCCAGCTCCCTGGGGAAATGTACTCTTCTGAAACTGAACTTGCAGACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
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| 3UTR CAA 90 bp | TCAAAGCTCCAAAGTAAATGGGTGCAGGGATGCCAGCGAATATTCTaGTGCAAAATGCGTGTAATCCAATTCCAAGGGACTTCTCTTCAG | + |
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Preference number: 2 (lower is better) Translates to: SKLQSKWVQGCQRIF*CKMRVIQFQGTSLQ Trigger: CTGAAGAGAAGTCCCTTGGAATTGGATTACACGCATTTTGCACAAGAATATTCGCTGGCATCCCTGCACCCATTTACTTTGGAGCTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
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| 3UTR-3UTR TCA 90 bp | GTTTTCAGTTCTCCATCATTCTCGACCTTAGGAATTCTGTGCACATCTGTGCACAAATACCCAAGGGCATaGTGGGAGTTTCACCAATTC | + |
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Preference number: 2 (lower is better) Translates to: VFSSPSFSTLGILCTSVHKYPRA*WEFHQF Trigger: GAATTGGTGAAACTCCCATCATGCCCTTGGGTATTT...GTGCACAGATGTGCACAGAATTCCTAAGGTCGAGAATGATGGAGAACTGAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
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| 3UTR-3UTR GCA 90 bp | ATCCTACAGGCTCCTGGCTCACCACATTTCAGAGTTCCCCAATGTAAGCAGGTTGTCTACATAAATTCTTaGACAGAAGGATCCCAACAA | + |
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Preference number: 2 (lower is better) Translates to: ILQAPGSPHFRVPQCKQVVYINS*TEGSQQ Trigger: TTGTTGGGATCCTTCTGTGCAAGAATTTATGTAGAC...AACCTGCTTACATTGGGGAACTCTGAAATGTGGTGAGCCAGGAGCCTGTAGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
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| 3UTR-3UTR GCA 90 bp | GTGCAGGGATGCCAGCGAATATTCTTGTGCAAAATGCGTGTAATCCAATTCCAAGATTTTCCATACTGCTaGTCCAGGTATTTGGGCAAG | + |
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Preference number: 2 (lower is better) Translates to: VQGCQRIFLCKMRVIQFQDFPYC*SRYLGK Trigger: CTTGCCCAAATACCTGGAGCAGCAGTATGGAAAATC...TTGGAATTGGATTACACGCATTTTGCACAAGAATATTCGCTGGCATCCCTGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
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| 3UTR-3UTR CCA 90 bp | CTCGACCTTAGGAATTCTGTGCACATCTGTGCACTCGCTTTTCTTCACTGTGAGTATCAGTGGGAGTTATaGTCAGGTCATCTGTATTCA | + |
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Preference number: 2 (lower is better) Translates to: LDLRNSVHICALAFLHCEYQWEL*SGHLYS Trigger: TGAATACAGATGACCTGACCATAACTCCCACTGATA...CTCACAGTGAAGAAAAGCGAGTGCACAGATGTGCACAGAATTCCTAAGGTCGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
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| 3UTR CAA 90 bp | TGGTCAGGTCATCTGTATTCACAGACCCTGTGTCTACATAAATTCTaGCACAGAAGGATCCCAACAAAAGTCCAACAATTGGGCCAATCA | + |
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Preference number: 2 (lower is better) Translates to: WSGHLYSQTLCLHKF*HRRIPTKVQQLGQS Trigger: TGATTGGCCCAATTGTTGGACTTTTGTTGGGATCCTTCTGTGCAAGAATTTATGTAGACACAGGGTCTGTGAATACAGATGACCTGACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
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| 3UTR-3UTR GCA 90 bp | GCCCTGATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTCAAAGGTTCTGTTCAGGGCCTTaGATAGGCCAGGAGAAGATT | + |
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Preference number: 2 (lower is better) Translates to: ALIYFRKRVPLVPLMIQRFCSGP*IGQEKI Trigger: AATCTTCTCCTGGCCTATGCAAGGCCCTGAACAGAA...CCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAATCAGGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 ENSMUST00000153268.10 |
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| 3UTR-3UTR GCA 90 bp | ATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTCAAAGGAAGTGCGTTTGGGGTGGGATATaGACACCACAGTGTGGGAGT | + |
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Preference number: 2 (lower is better) Translates to: IYFRKRVPLVPLMIQRKCVWGGI*TPQCGS Trigger: ACTCCCACACTGTGGTGTGCATATCCCACCCCAAAC...GCACTTCCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 ENSMUST00000153268.10 |
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| 3UTR CAA 90 bp | TTTCCATACTGCTGCTCCAGGTATTTGGGCAAGAAGGTAAACATATaGATAAATGCGTTTATCTGGAGCACACTTGTCAGGATGAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: FPYCCSRYLGKKVNI*INAFIWSTLVRMRS Trigger: GCTTCTCATCCTGACAAGTGTGCTCCAGATAAACGCATTTATCAATATGTTTACCTTCTTGCCCAAATACCTGGAGCAGCAGTATGGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
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| 3UTR-3UTR GCA 90 bp | AGTCCAGCCCTGATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTAAAGGAAGTGCAATGTaGATTCTGTTCAGGGCCTTG | + |
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Preference number: 2 (lower is better) Translates to: SPALIYFRKRVPLVPLMIKGSAM*ILFRAL Trigger: CAAGGCCCTGAACAGAATGCACATTGCACTTCCTTT...AATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAATCAGGGCTGGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 ENSMUST00000153268.10 |
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| 3UTR-3UTR CCA 90 bp | ATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTCAAAGGAAGTGCGACAACCTGAAAGCGTaGTTGGTTCTGTCCTTCTGC | + |
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Preference number: 2 (lower is better) Translates to: IYFRKRVPLVPLMIQRKCDNLKA*LVLSFC Trigger: GCAGAAGGACAGAACCAACCACGCTTTCAGGTTGTC...GCACTTCCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 ENSMUST00000153268.10 |
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| 3UTR-3UTR CCA 90 bp | CCAATAAGTAAATATCCAATGCAGATTGGAGGTAAGTTACAAACACCTATGAGGAGAAAAAGGGGATGCTaGTCAGGATATTCACTCCTG | + |
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Preference number: 2 (lower is better) Translates to: PISKYPMQIGGKLQTPMRRKRGC*SGYSLL Trigger: CAGGAGTGAATATCCTGACCAGCATCCCCTTTTTCT...CCTCATAGGTGTTTGTAACTTACCTCCAATCTGCATTGGATATTTACTTATTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
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| 3UTR-3UTR CCA 90 bp | AAGAACCATGTACCCAGGTATGGCTGTGATCGAATAGATGAAACTGCCAATTACGTTAAGCCAGCAACTTaGAAATTATCACAGCTTATC | + |
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Preference number: 2 (lower is better) Translates to: KNHVPRYGCDRIDETANYVKPAT*KLSQLI Trigger: GATAAGCTGTGATAATTTCCAAGTTGCTGGCTTAAC...GTAATTGGCAGTTTCATCTATTCGATCACAGCCATACCTGGGTACATGGTTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
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| 3UTR CAA 90 bp | AGGTACTCAAACAGGGATAGGCAGAATGCCATGTATGCAGCCTTCTaGACAGTAATCCTGAACTTCTTCATAATAAAGCCAATAAGTAAA | + |
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Preference number: 2 (lower is better) Translates to: RYSNRDRQNAMYAAF*TVILNFFIIKPISK Trigger: TTTACTTATTGGCTTTATTATGAAGAAGTTCAGGATTACTGTCAAGAAGGCTGCATACATGGCATTCTGCCTATCCCTGTTTGAGTACCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
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| 3UTR-3UTR GCA 90 bp | CCAATAAGTAAATATCCAATGCAGATTGGAGGTAAGTTACAAACACCTATGAGGCAGGATATTCACTCCTaGACAGACCAAAAAGCCAAT | + |
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Preference number: 2 (lower is better) Translates to: PISKYPMQIGGKLQTPMRQDIHS*TDQKAN Trigger: ATTGGCTTTTTGGTCTGTGCAGGAGTGAATATCCTG...CCTCATAGGTGTTTGTAACTTACCTCCAATCTGCATTGGATATTTACTTATTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
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| 3UTR-3UTR GCA 90 bp | ATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTCAAAGGAAGTGCTTCCTGATGACTGAATaGAGCTGCAATTTTGAAACA | + |
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Preference number: 2 (lower is better) Translates to: IYFRKRVPLVPLMIQRKCFLMTE*SCNFET Trigger: TGTTTCAAAATTGCAGCTGCATTCAGTCATCAGGAA...GCACTTCCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
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| 3UTR-3UTR CAA 90 bp | GTTCCCATTCCAACAGACTTCTCACAGCCCGCGAGGCAGGCTGACATGTATGATATTCTGTTCAGGGCCTaGCATAGGCCAGGAGAAGAT | + |
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Preference number: 3 (lower is better) Translates to: VPIPTDFSQPARQADMYDILFRA*HRPGED Trigger: ATCTTCTCCTGGCCTATGCAAGGCCCTGAACAGAAT...ATCATACATGTCAGCCTGCCTCGCGGGCTGTGAGAAGTCTGTTGGAATGGGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
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| 3UTR CCA 72 bp | ACCAAGCACCGACCCAGCGTGTATCAGTGGGAGTTATaGTCAGGTCATCTGTATTCACAGACCCTGTGTCTA | + |
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Preference number: 3 (lower is better) Translates to: TKHRPSVYQWEL*SGHLYSQTLCL Trigger: TAGACACAGGGTCTGTGAATACAGATGACCTGACCATAACTCCCACTGATACACGCTGGGTCGGTGCTTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
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| 3UTR-3UTR CAA 90 bp | TATGTGACTAGAATGAGTGAGCACCAGAGGCCTCCTGAGGATGAGACAGTGACTATTCTGTTCAGGGCCTaGCATAGGCCAGGAGAAGAT | + |
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Preference number: 3 (lower is better) Translates to: YVTRMSEHQRPPEDETVTILFRA*HRPGED Trigger: ATCTTCTCCTGGCCTATGCAAGGCCCTGAACAGAAT...AGTCACTGTCTCATCCTCAGGAGGCCTCTGGTGCTCACTCATTCTAGTCACATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 ENSMUST00000153268.10 |
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| 3UTR GCA 72 bp | GCCCCAGGACTGCAGATGAGTTTCCTGATGACTGAATaGAGCTGCAATTTTGAAACACCATGTGGGTTCCCA | + |
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Preference number: 3 (lower is better) Translates to: APGLQMSFLMTE*SCNFETPCGFP Trigger: TGGGAACCCACATGGTGTTTCAAAATTGCAGCTGCATTCAGTCATCAGGAAACTCATCTGCAGTCCTGGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
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| 3UTR-3UTR CAA 90 bp | ATCCTACAGGCTCCTGGCTCACCACATTTCAGAGTTCCCCAATGTAAGCAGGTTTGTCCTTCTGCCATGTaGGTCCCAATGATCAAACAC | + |
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Preference number: 3 (lower is better) Translates to: ILQAPGSPHFRVPQCKQVCPSAM*VPMIKH Trigger: GTGTTTGATCATTGGGACCAACATGGCAGAAGGACA...AACCTGCTTACATTGGGGAACTCTGAAATGTGGTGAGCCAGGAGCCTGTAGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
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| 3UTR TCA 72 bp | ACACCACAGTGTGGGAGTAAAGAGAAAAGGACAACCTaGAAGCGTGGTTGGTTCTGTCCTTCTGCCATGTTG | + |
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Preference number: 3 (lower is better) Translates to: TPQCGSKEKRTT*KRGWFCPSAML Trigger: CAACATGGCAGAAGGACAGAACCAACCACGCTTTCAGGTTGTCCTTTTCTCTTTACTCCCACACTGTGGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 ENSMUST00000153268.10 |
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| 3UTR-3UTR CAA 90 bp | CTACAGGCTCCTGGCTCACCACATTTCAGAGTTCCCCAATGTAAGCAGGTTCTGCTGTGCTTCTCCTCTTaGTCATTTTCAGTTCTATCC | + |
|
Preference number: 3 (lower is better) Translates to: LQAPGSPHFRVPQCKQVLLCFSS*SFSVLS Trigger: GGATAGAACTGAAAATGACAAAGAGGAGAAGCACAG...CAGAACCTGCTTACATTGGGGAACTCTGAAATGTGGTGAGCCAGGAGCCTGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
||
| 3UTR-3UTR CAA 90 bp | TATGTGACTAGAATGAGTGAGCACCAGAGGCCTCCTGAGGATGAGACAGTGACTTATTTGTTTGTTTGTTaGGGGTGGGATATGCACACC | + |
|
Preference number: 3 (lower is better) Translates to: YVTRMSEHQRPPEDETVTYLFVC*GWDMHT Trigger: GGTGTGCATATCCCACCCCAAACAAACAAACAAATA...AGTCACTGTCTCATCCTCAGGAGGCCTCTGGTGCTCACTCATTCTAGTCACATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 ENSMUST00000153268.10 |
||
| 3UTR-3UTR CAA 90 bp | GTTTTCAGTTCTCCATCATTCTCGACCTTAGGAATTCTGTGCACATCTGTGCACCCTCGGTTTTCCTCCTaGGCTTTTTCTCTGTGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: VFSSPSFSTLGILCTSVHPRFSS*AFSLCF Trigger: GAAGCACAGAGAAAAAGCCAAGGAGGAAAACCGAGG...GTGCACAGATGTGCACAGAATTCCTAAGGTCGAGAATGATGGAGAACTGAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
||
| 3UTR GCA 72 bp | AAGGACAACCTGAAAGCGTGGTTGGTTCTGTCCTTCTaGCATGTTGGTCCCAATGATCAAACACAACTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: KDNLKAWLVLSF*HVGPNDQTQLV Trigger: GACAAGTTGTGTTTGATCATTGGGACCAACATGGCAGAAGGACAGAACCAACCACGCTTTCAGGTTGTCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 ENSMUST00000153268.10 |
||
| 3UTR-3UTR CAA 90 bp | CTCGACCTTAGGAATTCTGTGCACATCTGTGCACTCGCTTTTCTTCACTGTGAGTATTTGTTTGTTTGTTaGGGGTGGGATATGCACACC | + |
|
Preference number: 3 (lower is better) Translates to: LDLRNSVHICALAFLHCEYLFVC*GWDMHT Trigger: GGTGTGCATATCCCACCCCAAACAAACAAACAAATA...CTCACAGTGAAGAAAAGCGAGTGCACAGATGTGCACAGAATTCCTAAGGTCGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
||
| 3UTR-3UTR CAA 90 bp | AATTTTGAAACACCATGTGGGTTCCCATTCCAACAGACTTCTCACAGCCCGCGAACAAAAGTCCAACAATaGGGCCAATCATCTTTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: NFETPCGFPFQQTSHSPRTKVQQ*GQSSFL Trigger: CAGGAAAGATGATTGGCCCAATTGTTGGACTTTTGT...TCGCGGGCTGTGAGAAGTCTGTTGGAATGGGAACCCACATGGTGTTTCAAAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
||
| 3UTR GCA 72 bp | GATCCCATGTGTTTGTTAAGCAGCTACACCTTGTGTTaGAGTCAGCAAGGACCTTGTTCTCCACATATAGAG | + |
|
Preference number: 3 (lower is better) Translates to: DPMCLLSSYTLC*SQQGPCSPHIE Trigger: CTCTATATGTGGAGAACAAGGTCCTTGCTGACTGCAACACAAGGTGTAGCTGCTTAACAAACACATGGGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
||
| 3UTR GCA 72 bp | GCAGGTTCTGTCTATCAAAGCTCCAAAGTAAATGGGTaGAGGGATGCCAGCGAATATTCTTGTGCAAAATGC | + |
|
Preference number: 3 (lower is better) Translates to: AGSVYQSSKVNG*RDASEYSCAKC Trigger: GCATTTTGCACAAGAATATTCGCTGGCATCCCTGCACCCATTTACTTTGGAGCTTTGATAGACAGAACCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
||
| 3UTR GCA 72 bp | TTCAGTTCTCCATCATTCTCGACCTTAGGAATTCTGTaGACATCTGTGCACTCGCTTTTCTTCACTGTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: FSSPSFSTLGIL*TSVHSLFFTVS Trigger: GCTCACAGTGAAGAAAAGCGAGTGCACAGATGTGCACAGAATTCCTAAGGTCGAGAATGATGGAGAACTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
||
| 3UTR TCA 72 bp | TTCTGTGCACATCTGTGCACTCGCTTTTCTTCACTGTaGGCTTCATGTCTGCAAGTTCAGTTTCAGAAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: FCAHLCTRFSSL*ASCLQVQFQKS Trigger: ACTCTTCTGAAACTGAACTTGCAGACATGAAGCTCACAGTGAAGAAAAGCGAGTGCACAGATGTGCACAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
||
| 3UTR CCA 72 bp | GTAAGCAGGTTCTGTCTATCAAAGCTCCAAAGTAAATaGGTGCAGGGATGCCAGCGAATATTCTTGTGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: VSRFCLSKLQSK*VQGCQRIFLCK Trigger: TTTGCACAAGAATATTCGCTGGCATCCCTGCACCCATTTACTTTGGAGCTTTGATAGACAGAACCTGCTTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
||
| 3UTR-3UTR CAA 90 bp | AGTCAGCAAGGACCTTGTTCTCCACATATAGAGGGTGCTGAACTCCTTCATAAGTGTCTACATAAATTCTaGCACAGAAGGATCCCAACA | + |
|
Preference number: 3 (lower is better) Translates to: SQQGPCSPHIEGAELLHKCLHKF*HRRIPT Trigger: TGTTGGGATCCTTCTGTGCAAGAATTTATGTAGACA...CTTATGAAGGAGTTCAGCACCCTCTATATGTGGAGAACAAGGTCCTTGCTGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
||
| 3UTR TCA 72 bp | CTCTTAGTGCTGCAGGCAACACTAGATAAATGCGCCTaGAGTTATTTATATTGTACATCCTACAGGCTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: LLVLQATLDKCA*SYLYCTSYRLL Trigger: CAGGAGCCTGTAGGATGTACAATATAAATAACTTCAGGCGCATTTATCTAGTGTTGCCTGCAGCACTAAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
||
| 3UTR GCA 72 bp | TGTCTATCAAAGCTCCAAAGTAAATGGGTGCAGGGATaGCAGCGAATATTCTTGTGCAAAATGCGTGTAATC | + |
|
Preference number: 3 (lower is better) Translates to: CLSKLQSKWVQG*QRIFLCKMRVI Trigger: GATTACACGCATTTTGCACAAGAATATTCGCTGGCATCCCTGCACCCATTTACTTTGGAGCTTTGATAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
||
| 3UTR CCA 72 bp | CATGTAAATAGGATTGCAGGAGAGGCTCTTCATGAATaGCAGGAAATCTTTAGTGATTCCTCGGTTTTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: HVNRIAGEALHE*QEIFSDSSVFL Trigger: GAGGAAAACCGAGGAATCACTAAAGATTTCCTGCCATTCATGAAGAGCCTCTCCTGCAATCCTATTTACATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
||
| 3UTR-3UTR CAA 90 bp | CATGTCTGCAAGTTCAGTTTCAGAAGAGTACATTTCCCCAGGGAGCTGGAATTTAATATCCAATGCAGATaGGAGGTAAGTTACAAACAC | + |
|
Preference number: 3 (lower is better) Translates to: HVCKFSFRRVHFPRELEFNIQCR*EVSYKH Trigger: GTGTTTGTAACTTACCTCCAATCTGCATTGGATATT...AAATTCCAGCTCCCTGGGGAAATGTACTCTTCTGAAACTGAACTTGCAGACATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
||
| 3UTR CCA 72 bp | AGTTCAGTTTCAGAAGAGTACATTTCCCCAGGGAGCTaGAATTTCCTCATAAGTATCAGAATGAAGAATGCA | + |
|
Preference number: 3 (lower is better) Translates to: SSVSEEYISPGS*NFLISIRMKNA Trigger: TGCATTCTTCATTCTGATACTTATGAGGAAATTCCAGCTCCCTGGGGAAATGTACTCTTCTGAAACTGAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
||
| 3UTR TCA 72 bp | TTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATaGTTCAAAGGAAGTGCAATGTGCATTCTGTTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: FILGKEFLSYLS*FKGSAMCILFR Trigger: CCTGAACAGAATGCACATTGCACTTCCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 ENSMUST00000153268.10 |
||
| 3UTR CAA 72 bp | CAGCCCGCGAGGCAGGCTGACATGTATGATAGGCCATaGTCTCCACACACTGGATCCCATGTGTTTGTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: QPARQADMYDRP*SPHTGSHVFVK Trigger: CTTAACAAACACATGGGATCCAGTGTGTGGAGACAATGGCCTATCATACATGTCAGCCTGCCTCGCGGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
||
| CDS-3UTR GCA 90 bp | TATGTGACTAGAATGAGTGAGCACCAGAGGCCTCCTGAGGATGAGACAGTGACTCACTCTGCAGGGTCTTaGGTTGGCTTTAAGGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: YVTRMSEHQRPPEDETVTHSAGS*VGFKVC Trigger: ACAGACCTTAAAGCCAACGCAAGACCCTGCAGAGTG...AGTCACTGTCTCATCCTCAGGAGGCCTCTGGTGCTCACTCATTCTAGTCACATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| CDS-3UTR CCA 90 bp | TATGTGACTAGAATGAGTGAGCACCAGAGGCCTCCTGAGGATGAGACAGTGACTAAGCTCCAAAGTAAATaGGTGCAGGGATGCCAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: YVTRMSEHQRPPEDETVTKLQSK*VQGCQR Trigger: TCGCTGGCATCCCTGCACCCATTTACTTTGGAGCTT...AGTCACTGTCTCATCCTCAGGAGGCCTCTGGTGCTCACTCATTCTAGTCACATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| CDS-3UTR CCA 90 bp | TATGTGACTAGAATGAGTGAGCACCAGAGGCCTCCTGAGGATGAGACAGTGACTCATCCTACAGGCTCCTaGCTCACCACATTTCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: YVTRMSEHQRPPEDETVTHPTGS*LTTFQS Trigger: ACTCTGAAATGTGGTGAGCCAGGAGCCTGTAGGATG...AGTCACTGTCTCATCCTCAGGAGGCCTCTGGTGCTCACTCATTCTAGTCACATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| CDS-3UTR TCA 90 bp | TATGTGACTAGAATGAGTGAGCACCAGAGGCCTCCTGAGGATGAGACAGTGACTATTCGTATCGGCCCATaGGGAAATGAGGTAAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: YVTRMSEHQRPPEDETVTIRIGP*GNEVRT Trigger: TGTCCTTACCTCATTTCCTCATGGGCCGATACGAAT...AGTCACTGTCTCATCCTCAGGAGGCCTCTGGTGCTCACTCATTCTAGTCACATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| CDS-3UTR GCA 90 bp | TATGTGACTAGAATGAGTGAGCACCAGAGGCCTCCTGAGGATGAGACAGTGACTACCTTAGGAATTCTGTaGACATCTGTGCACTCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: YVTRMSEHQRPPEDETVTTLGIL*TSVHSL Trigger: AAGCGAGTGCACAGATGTGCACAGAATTCCTAAGGT...AGTCACTGTCTCATCCTCAGGAGGCCTCTGGTGCTCACTCATTCTAGTCACATA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| CDS-3UTR TCA 90 bp | TATGTGACTAGAATGAGTGAGCACCAGAGGCCTCCTGAGGATGAGACAGTGACTACTTCTCTTCAGACTTaGTACACCTCAGAAGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: YVTRMSEHQRPPEDETVTTSLQT*YTSEEP Trigger: TGGTTCTTCTGAGGTGTATCAAGTCTGAAGAGAAGT...AGTCACTGTCTCATCCTCAGGAGGCCTCTGGTGCTCACTCATTCTAGTCACATA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| 3UTR CAA 72 bp | ACACTGGATCCCATGTGTTTGTTAAGCAGCTACACCTaGTGTTGCAGTCAGCAAGGACCTTGTTCTCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: TLDPMCLLSSYT*CCSQQGPCSPH Trigger: ATGTGGAGAACAAGGTCCTTGCTGACTGCAACACAAGGTGTAGCTGCTTAACAAACACATGGGATCCAGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
||
| 3UTR CAA 72 bp | ATAGGCCATTGTCTCCACACACTGGATCCCATGTGTTaGTTAAGCAGCTACACCTTGTGTTGCAGTCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: IGHCLHTLDPMC*LSSYTLCCSQQ Trigger: TTGCTGACTGCAACACAAGGTGTAGCTGCTTAACAAACACATGGGATCCAGTGTGTGGAGACAATGGCCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
||
| 3UTR CAA 72 bp | GGATCCCATGTGTTTGTTAAGCAGCTACACCTTGTGTaGCAGTCAGCAAGGACCTTGTTCTCCACATATAGA | + |
|
Preference number: 4 (lower is better) Translates to: GSHVFVKQLHLV*QSARTLFSTYR Trigger: TCTATATGTGGAGAACAAGGTCCTTGCTGACTGCAACACAAGGTGTAGCTGCTTAACAAACACATGGGATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
||
| CDS-3UTR TCA 90 bp | GCCCTGATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTCAAAGGGAGGAGGACGACCTCTaGAGTGGATTTTCCATACTG | + |
|
Preference number: 4 (lower is better) Translates to: ALIYFRKRVPLVPLMIQREEDDL*SGFSIL Trigger: CAGTATGGAAAATCCACTTCAGAGGTCGTCCTCCTC...CCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAATCAGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| CDS-3UTR GCA 90 bp | TATGTGACTAGAATGAGTGAGCACCAGAGGCCTCCTGAGGATGAGACAGTGACTTTGGCTTTTTCTCTGTaGTTCTCCTCTTTGTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: YVTRMSEHQRPPEDETVTLAFSL*FSSLSF Trigger: AAATGACAAAGAGGAGAAGCACAGAGAAAAAGCCAA...AGTCACTGTCTCATCCTCAGGAGGCCTCTGGTGCTCACTCATTCTAGTCACATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| CDS-3UTR CCA 90 bp | TATGTGACTAGAATGAGTGAGCACCAGAGGCCTCCTGAGGATGAGACAGTGACTGTTAAGCCAGCAACTTaGAAATTATCACAGCTTATC | + |
|
Preference number: 4 (lower is better) Translates to: YVTRMSEHQRPPEDETVTVKPAT*KLSQLI Trigger: GATAAGCTGTGATAATTTCCAAGTTGCTGGCTTAAC...AGTCACTGTCTCATCCTCAGGAGGCCTCTGGTGCTCACTCATTCTAGTCACATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| 3UTR CAA 72 bp | TTCAAAGGAAGTGCAATGTGCATTCTGTTCAGGGCCTaGCATAGGCCAGGAGAAGATTCATTACAGCTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: FKGSAMCILFRA*HRPGEDSLQLS Trigger: ACTAAGCTGTAATGAATCTTCTCCTGGCCTATGCAAGGCCCTGAACAGAATGCACATTGCACTTCCTTTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
||
| CDS-3UTR TCA 90 bp | GCCCTGATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTCAAAGGATTCGTATCGGCCCATaGGGAAATGAGGTAAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: ALIYFRKRVPLVPLMIQRIRIGP*GNEVRT Trigger: TGTCCTTACCTCATTTCCTCATGGGCCGATACGAAT...CCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAATCAGGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| CDS-3UTR TCA 90 bp | GCCCTGATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTCAAAGGATGCAGCTGCAATTTTaGAACACCATGTGGGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ALIYFRKRVPLVPLMIQRMQLQF*NTMWVP Trigger: GGGAACCCACATGGTGTTTCAAAATTGCAGCTGCAT...CCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAATCAGGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| CDS-3UTR GCA 90 bp | AAGAACCATGTACCCAGGTATGGCTGTGATCGAATAGATGAAACTGCCAATTACTCTGACCCCATGGGTTaGAATCCTTTTCTCTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KNHVPRYGCDRIDETANYSDPMG*NPFLCF Trigger: GAAACAGAGAAAAGGATTGCAACCCATGGGGTCAGA...GTAATTGGCAGTTTCATCTATTCGATCACAGCCATACCTGGGTACATGGTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
||
| CDS-3UTR GCA 90 bp | CCTCTTCAAAGGTTTTACTCTAAGATGATTTTGAAAGTAGCACTGTGCTCTGGGAGCTACACCTTGTGTTaGAGTCAGCAAGGACCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PLQRFYSKMILKVALCSGSYTLC*SQQGPC Trigger: ACAAGGTCCTTGCTGACTGCAACACAAGGTGTAGCT...CCCAGAGCACAGTGCTACTTTCAAAATCATCTTAGAGTAAAACCTTTGAAGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| CDS-3UTR TCA 90 bp | GCCCTGATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTCAAAGGCGGCCCATGAGGAAATaGGGTAAGGACATTAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: ALIYFRKRVPLVPLMIQRRPMRK*GKDIKK Trigger: TTTCTTAATGTCCTTACCTCATTTCCTCATGGGCCG...CCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAATCAGGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| CDS-3UTR TCA 90 bp | CCTCTTCAAAGGTTTTACTCTAAGATGATTTTGAAAGTAGCACTGTGCTCTGGGCGGCCCATGAGGAAATaGGGTAAGGACATTAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PLQRFYSKMILKVALCSGRPMRK*GKDIKK Trigger: TTTCTTAATGTCCTTACCTCATTTCCTCATGGGCCG...CCCAGAGCACAGTGCTACTTTCAAAATCATCTTAGAGTAAAACCTTTGAAGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| CDS-3UTR TCA 90 bp | ATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTCAAAGGAAGTGCGAGGAGGACGACCTCTaGAGTGGATTTTCCATACTG | + |
|
Preference number: 4 (lower is better) Translates to: IYFRKRVPLVPLMIQRKCEEDDL*SGFSIL Trigger: CAGTATGGAAAATCCACTTCAGAGGTCGTCCTCCTC...GCACTTCCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| CDS-3UTR TCA 90 bp | GCCCTGATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTCAAAGGCGCTTTTCTTCACTGTaGGCTTCATGTCTGCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: ALIYFRKRVPLVPLMIQRRFSSL*ASCLQV Trigger: AACTTGCAGACATGAAGCTCACAGTGAAGAAAAGCG...CCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAATCAGGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| CDS-3UTR GCA 90 bp | GCCCTGATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTCAAAGGTCTGACCCCATGGGTTaGAATCCTTTTCTCTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ALIYFRKRVPLVPLMIQRSDPMG*NPFLCF Trigger: GAAACAGAGAAAAGGATTGCAACCCATGGGGTCAGA...CCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAATCAGGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 ENSMUST00000153268.10 |
||
| CDS-3UTR GCA 90 bp | ATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTCAAAGGAAGTGCCACTCTGCAGGGTCTTaGGTTGGCTTTAAGGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: IYFRKRVPLVPLMIQRKCHSAGS*VGFKVC Trigger: ACAGACCTTAAAGCCAACGCAAGACCCTGCAGAGTG...GCACTTCCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| CDS-3UTR GCA 90 bp | CCTCTTCAAAGGTTTTACTCTAAGATGATTTTGAAAGTAGCACTGTGCTCTGGGGATTTTCCATACTGCTaGTCCAGGTATTTGGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PLQRFYSKMILKVALCSGDFPYC*SRYLGK Trigger: CTTGCCCAAATACCTGGAGCAGCAGTATGGAAAATC...CCCAGAGCACAGTGCTACTTTCAAAATCATCTTAGAGTAAAACCTTTGAAGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| CDS-3UTR GCA 90 bp | CCTCTTCAAAGGTTTTACTCTAAGATGATTTTGAAAGTAGCACTGTGCTCTGGGACCTTAGGAATTCTGTaGACATCTGTGCACTCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PLQRFYSKMILKVALCSGTLGIL*TSVHSL Trigger: AAGCGAGTGCACAGATGTGCACAGAATTCCTAAGGT...CCCAGAGCACAGTGCTACTTTCAAAATCATCTTAGAGTAAAACCTTTGAAGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| 3UTR CAA 72 bp | AACAGGGATAGGCAGAATGCCATGTATGCAGCCTTCTaGACAGTAATCCTGAACTTCTTCATAATAAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NRDRQNAMYAAF*TVILNFFIIKP Trigger: TGGCTTTATTATGAAGAAGTTCAGGATTACTGTCAAGAAGGCTGCATACATGGCATTCTGCCTATCCCTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
||
| CDS-3UTR TCA 90 bp | CTGATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTCAAAGGAAGATGCAGCTGCAATTTTaGAACACCATGTGGGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LIYFRKRVPLVPLMIQRKMQLQF*NTMWVP Trigger: GGGAACCCACATGGTGTTTCAAAATTGCAGCTGCAT...CTTCCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAATCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| CDS-3UTR TCA 90 bp | AGTCCAGCCCTGATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTACTTCTCTTCAGACTTaGTACACCTCAGAAGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: SPALIYFRKRVPLVPLMITSLQT*YTSEEP Trigger: TGGTTCTTCTGAGGTGTATCAAGTCTGAAGAGAAGT...AATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAATCAGGGCTGGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| CDS-3UTR GCA 90 bp | GCCCTGATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTCAAAGGAGAAGAAAAAGGGGATaGTGGTCAGGATATTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: ALIYFRKRVPLVPLMIQRRRKRG*WSGYSL Trigger: GAGTGAATATCCTGACCAGCATCCCCTTTTTCTTCT...CCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAATCAGGGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| CDS-3UTR GCA 90 bp | TATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTCAAAGGAAGTGCAATAGCTACACCTTGTGTTaGAGTCAGCAAGGACCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: YFRKRVPLVPLMIQRKCNSYTLC*SQQGPC Trigger: ACAAGGTCCTTGCTGACTGCAACACAAGGTGTAGCT...ATTGCACTTCCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| CDS-3UTR TCA 90 bp | TATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTCAAAGGAAGTGCAATAAATACCCAAGGGCATaGTGGGAGTTTCACCAATTC | + |
|
Preference number: 4 (lower is better) Translates to: YFRKRVPLVPLMIQRKCNKYPRA*WEFHQF Trigger: GAATTGGTGAAACTCCCATCATGCCCTTGGGTATTT...ATTGCACTTCCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| CDS-3UTR TCA 90 bp | GCCCTGATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTCAAAGGTGCCAATTACCGACATaGTTAAAAAGTACTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ALIYFRKRVPLVPLMIQRCQLPT*LKSTAA Trigger: AGCTGCAGTACTTTTTAATCATGTCGGTAATTGGCA...CCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAATCAGGGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| CDS-3UTR GCA 90 bp | CTGATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTCAAAGGAAGTCTGACCCCATGGGTTaGAATCCTTTTCTCTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LIYFRKRVPLVPLMIQRKSDPMG*NPFLCF Trigger: GAAACAGAGAAAAGGATTGCAACCCATGGGGTCAGA...CTTCCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAATCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 ENSMUST00000153268.10 |
||
| CDS-3UTR GCA 90 bp | CTGATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTCAAAGGAAGGATTTTCCATACTGCTaGTCCAGGTATTTGGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LIYFRKRVPLVPLMIQRKDFPYC*SRYLGK Trigger: CTTGCCCAAATACCTGGAGCAGCAGTATGGAAAATC...CTTCCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAATCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| CDS-3UTR GCA 90 bp | ATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTCAAAGGAAGTGCTCCAAAGTAAATGGGTaGAGGGATGCCAGCGAATAT | + |
|
Preference number: 4 (lower is better) Translates to: IYFRKRVPLVPLMIQRKCSKVNG*RDASEY Trigger: ATATTCGCTGGCATCCCTGCACCCATTTACTTTGGA...GCACTTCCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| CDS-3UTR GCA 90 bp | CCTCTTCAAAGGTTTTACTCTAAGATGATTTTGAAAGTAGCACTGTGCTCTGGGTGTGAGCTTCATGTCTaGAAGTTCAGTTTCAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PLQRFYSKMILKVALCSGCELHV*KFSFRR Trigger: TCTTCTGAAACTGAACTTGCAGACATGAAGCTCACA...CCCAGAGCACAGTGCTACTTTCAAAATCATCTTAGAGTAAAACCTTTGAAGAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| CDS-3UTR CCA 90 bp | GCCCTGATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTCAAAGGGAGGCTCTTCATGAATaGCAGGAAATCTTTAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: ALIYFRKRVPLVPLMIQREALHE*QEIFSD Trigger: ATCACTAAAGATTTCCTGCCATTCATGAAGAGCCTC...CCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAATCAGGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| 3UTR CAA 72 bp | CATCTGTATTCACAGACCCTGTGTCTACATAAATTCTaGCACAGAAGGATCCCAACAAAAGTCCAACAATTG | + |
|
Preference number: 4 (lower is better) Translates to: HLYSQTLCLHKF*HRRIPTKVQQL Trigger: CAATTGTTGGACTTTTGTTGGGATCCTTCTGTGCAAGAATTTATGTAGACACAGGGTCTGTGAATACAGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
||
| CDS-3UTR GCA 90 bp | CTGATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTCAAAGGAAGCAGGATATTCACTCCTaGACAGACCAAAAAGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LIYFRKRVPLVPLMIQRKQDIHS*TDQKAN Trigger: ATTGGCTTTTTGGTCTGTGCAGGAGTGAATATCCTG...CTTCCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAATCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| CDS-3UTR GCA 90 bp | ATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTCAAAGGAAGTGCCAGGATATTCACTCCTaGACAGACCAAAAAGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: IYFRKRVPLVPLMIQRKCQDIHS*TDQKAN Trigger: ATTGGCTTTTTGGTCTGTGCAGGAGTGAATATCCTG...GCACTTCCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| CDS-3UTR GCA 90 bp | ATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTCAAAGGAAGTGCAGAAGAAAAAGGGGATaGTGGTCAGGATATTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: IYFRKRVPLVPLMIQRKCRRKRG*WSGYSL Trigger: GAGTGAATATCCTGACCAGCATCCCCTTTTTCTTCT...GCACTTCCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| CDS-3UTR GCA 90 bp | AGTCCAGCCCTGATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTTTGGCTTTTTCTCTGTaGTTCTCCTCTTTGTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: SPALIYFRKRVPLVPLMILAFSL*FSSLSF Trigger: AAATGACAAAGAGGAGAAGCACAGAGAAAAAGCCAA...AATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAATCAGGGCTGGACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| CDS-3UTR GCA 90 bp | GCCCTGATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTCAAAGGTTCCTGATGACTGAATaGAGCTGCAATTTTGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: ALIYFRKRVPLVPLMIQRFLMTE*SCNFET Trigger: TGTTTCAAAATTGCAGCTGCATTCAGTCATCAGGAA...CCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAATCAGGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| CDS-3UTR GCA 90 bp | AGTCCAGCCCTGATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTTTCCTGATGACTGAATaGAGCTGCAATTTTGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: SPALIYFRKRVPLVPLMIFLMTE*SCNFET Trigger: TGTTTCAAAATTGCAGCTGCATTCAGTCATCAGGAA...AATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAATCAGGGCTGGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| CDS-3UTR CCA 90 bp | CTGATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTCAAAGGAAGATTTCCCCAGGGAGCTaGAATTTCCTCATAAGTATC | + |
|
Preference number: 4 (lower is better) Translates to: LIYFRKRVPLVPLMIQRKISPGS*NFLISI Trigger: GATACTTATGAGGAAATTCCAGCTCCCTGGGGAAAT...CTTCCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAATCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| CDS-3UTR CCA 90 bp | TATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTCAAAGGAAGTGCAATATTTCCCCAGGGAGCTaGAATTTCCTCATAAGTATC | + |
|
Preference number: 4 (lower is better) Translates to: YFRKRVPLVPLMIQRKCNISPGS*NFLISI Trigger: GATACTTATGAGGAAATTCCAGCTCCCTGGGGAAAT...ATTGCACTTCCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| 3UTR CAA 72 bp | TCTGAAGTGGATTTTCCATACTGCTGCTCCAGGTATTaGGGCAAGAAGGTAAACATATTGATAAATGCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SEVDFPYCCSRY*GKKVNILINAF Trigger: AAACGCATTTATCAATATGTTTACCTTCTTGCCCAAATACCTGGAGCAGCAGTATGGAAAATCCACTTCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
||
| CDS-3UTR TCA 90 bp | ATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTCAAAGGAAGTGCTGCCAATTACCGACATaGTTAAAAAGTACTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: IYFRKRVPLVPLMIQRKCCQLPT*LKSTAA Trigger: AGCTGCAGTACTTTTTAATCATGTCGGTAATTGGCA...GCACTTCCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| CDS-3UTR GCA 90 bp | AGTCCAGCCCTGATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTATGATTAAAAAGTACTaGAGCTTGTTAGCACACTCA | + |
|
Preference number: 4 (lower is better) Translates to: SPALIYFRKRVPLVPLMIMIKKY*SLLAHS Trigger: TGAGTGTGCTAACAAGCTGCAGTACTTTTTAATCAT...AATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAATCAGGGCTGGACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| CDS-3UTR GCA 90 bp | ATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTCAAAGGAAGTGCTGTGAGCTTCATGTCTaGAAGTTCAGTTTCAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: IYFRKRVPLVPLMIQRKCCELHV*KFSFRR Trigger: TCTTCTGAAACTGAACTTGCAGACATGAAGCTCACA...GCACTTCCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| CDS-3UTR CCA 90 bp | ATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTCAAAGGAAGTGCGAGGCTCTTCATGAATaGCAGGAAATCTTTAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: IYFRKRVPLVPLMIQRKCEALHE*QEIFSD Trigger: ATCACTAAAGATTTCCTGCCATTCATGAAGAGCCTC...GCACTTCCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| CDS-3UTR GCA 90 bp | ATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTCAAAGGAAGTGCGTCTACATAAATTCTTaGACAGAAGGATCCCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: IYFRKRVPLVPLMIQRKCVYINS*TEGSQQ Trigger: TTGTTGGGATCCTTCTGTGCAAGAATTTATGTAGAC...GCACTTCCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| CDS-3UTR GCA 90 bp | TATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTCAAAGGAAGTGCAATGTCTACATAAATTCTTaGACAGAAGGATCCCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: YFRKRVPLVPLMIQRKCNVYINS*TEGSQQ Trigger: TTGTTGGGATCCTTCTGTGCAAGAATTTATGTAGAC...ATTGCACTTCCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| CDS-3UTR CCA 90 bp | CTGATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTCAAAGGAAGGTTAAGCCAGCAACTTaGAAATTATCACAGCTTATC | + |
|
Preference number: 4 (lower is better) Translates to: LIYFRKRVPLVPLMIQRKVKPAT*KLSQLI Trigger: GATAAGCTGTGATAATTTCCAAGTTGCTGGCTTAAC...CTTCCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAATCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| CDS-3UTR GCA 90 bp | CTGATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTCAAAGGAAGATGATTAAAAAGTACTaGAGCTTGTTAGCACACTCA | + |
|
Preference number: 4 (lower is better) Translates to: LIYFRKRVPLVPLMIQRKMIKKY*SLLAHS Trigger: TGAGTGTGCTAACAAGCTGCAGTACTTTTTAATCAT...CTTCCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAATCAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| CDS-3UTR CAA 90 bp | TATGTGACTAGAATGAGTGAGCACCAGAGGCCTCCTGAGGATGAGACAGTGACTCCTCGGTTTTCCTCCTaGGCTTTTTCTCTGTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: YVTRMSEHQRPPEDETVTPRFSS*AFSLCF Trigger: GAAGCACAGAGAAAAAGCCAAGGAGGAAAACCGAGG...AGTCACTGTCTCATCCTCAGGAGGCCTCTGGTGCTCACTCATTCTAGTCACATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| CDS-3UTR CAA 90 bp | TATGTGACTAGAATGAGTGAGCACCAGAGGCCTCCTGAGGATGAGACAGTGACTCTGGATCCCATGTGTTaGTTAAGCAGCTACACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: YVTRMSEHQRPPEDETVTLDPMC*LSSYTL Trigger: CAAGGTGTAGCTGCTTAACAAACACATGGGATCCAG...AGTCACTGTCTCATCCTCAGGAGGCCTCTGGTGCTCACTCATTCTAGTCACATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| CDS-3UTR CAA 90 bp | TATGTGACTAGAATGAGTGAGCACCAGAGGCCTCCTGAGGATGAGACAGTGACTCTGTGCTTCTCCTCTTaGTCATTTTCAGTTCTATCC | + |
|
Preference number: 5 (lower is better) Translates to: YVTRMSEHQRPPEDETVTLCFSS*SFSVLS Trigger: GGATAGAACTGAAAATGACAAAGAGGAGAAGCACAG...AGTCACTGTCTCATCCTCAGGAGGCCTCTGGTGCTCACTCATTCTAGTCACATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| CDS-3UTR CAA 90 bp | TATGTGACTAGAATGAGTGAGCACCAGAGGCCTCCTGAGGATGAGACAGTGACTTGCCAGCGAATATTCTaGTGCAAAATGCGTGTAATC | + |
|
Preference number: 5 (lower is better) Translates to: YVTRMSEHQRPPEDETVTCQRIF*CKMRVI Trigger: GATTACACGCATTTTGCACAAGAATATTCGCTGGCA...AGTCACTGTCTCATCCTCAGGAGGCCTCTGGTGCTCACTCATTCTAGTCACATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| CDS-3UTR CAA 90 bp | TATGTGACTAGAATGAGTGAGCACCAGAGGCCTCCTGAGGATGAGACAGTGACTTGTGGGGATATCGAATaGTCTCTCTATTTGTGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: YVTRMSEHQRPPEDETVTCGDIE*SLYLCK Trigger: CTTACACAAATAGAGAGACAATTCGATATCCCCACA...AGTCACTGTCTCATCCTCAGGAGGCCTCTGGTGCTCACTCATTCTAGTCACATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 ENSMUST00000153268.10 |
||
| CDS-3UTR CAA 90 bp | AATTTTGAAACACCATGTGGGTTCCCATTCCAACAGACTTCTCACAGCCCGCGAGCCAACAGAAACATCTaGATCTTAGAAAAGCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: NFETPCGFPFQQTSHSPRANRNI*ILEKHL Trigger: CAGATGCTTTTCTAAGATCAAGATGTTTCTGTTGGC...TCGCGGGCTGTGAGAAGTCTGTTGGAATGGGAACCCACATGGTGTTTCAAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
||
| CDS-3UTR CAA 90 bp | TATGTGACTAGAATGAGTGAGCACCAGAGGCCTCCTGAGGATGAGACAGTGACTATCTCAAAGCTCCCATaGATAAGTCCAACTATAGAT | + |
|
Preference number: 5 (lower is better) Translates to: YVTRMSEHQRPPEDETVTISKLP*ISPTID Trigger: ATCTATAGTTGGACTTATCAATGGGAGCTTTGAGAT...AGTCACTGTCTCATCCTCAGGAGGCCTCTGGTGCTCACTCATTCTAGTCACATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 ENSMUST00000153268.10 |
||
| CDS-3UTR CAA 90 bp | CTCGACCTTAGGAATTCTGTGCACATCTGTGCACTCGCTTTTCTTCACTGTGAGATCTCAAAGCTCCCATaGATAAGTCCAACTATAGAT | + |
|
Preference number: 5 (lower is better) Translates to: LDLRNSVHICALAFLHCEISKLP*ISPTID Trigger: ATCTATAGTTGGACTTATCAATGGGAGCTTTGAGAT...CTCACAGTGAAGAAAAGCGAGTGCACAGATGTGCACAGAATTCCTAAGGTCGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
||
| CDS-3UTR CAA 90 bp | CTGATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTCAAAGGAAGCAGCTACACCTTGTGTaGCAGTCAGCAAGGACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LIYFRKRVPLVPLMIQRKQLHLV*QSARTL Trigger: CAAGGTCCTTGCTGACTGCAACACAAGGTGTAGCTG...CTTCCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAATCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| CDS-3UTR CAA 90 bp | GCCCTGATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTCAAAGGCTGGATCCCATGTGTTaGTTAAGCAGCTACACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ALIYFRKRVPLVPLMIQRLDPMC*LSSYTL Trigger: CAAGGTGTAGCTGCTTAACAAACACATGGGATCCAG...CCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAATCAGGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| CDS-3UTR CAA 90 bp | AGTCCAGCCCTGATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTAAAAAGTACTGCAGCTaGTTAGCACACTCAGGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SPALIYFRKRVPLVPLMIKKYCS*LAHSGP Trigger: AGGCCCTGAGTGTGCTAACAAGCTGCAGTACTTTTT...AATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAATCAGGGCTGGACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| CDS-3UTR CAA 90 bp | GTGCAGGGATGCCAGCGAATATTCTTGTGCAAAATGCGTGTAATCCAATTCCAATGTGGGGATATCGAATaGTCTCTCTATTTGTGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: VQGCQRIFLCKMRVIQFQCGDIE*SLYLCK Trigger: CTTACACAAATAGAGAGACAATTCGATATCCCCACA...TTGGAATTGGATTACACGCATTTTGCACAAGAATATTCGCTGGCATCCCTGCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
||
| CDS-3UTR CAA 90 bp | TATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTCAAAGGAAGTGCAATCCTCGGTTTTCCTCCTaGGCTTTTTCTCTGTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: YFRKRVPLVPLMIQRKCNPRFSS*AFSLCF Trigger: GAAGCACAGAGAAAAAGCCAAGGAGGAAAACCGAGG...ATTGCACTTCCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| CDS-3UTR CAA 90 bp | CCTCTTCAAAGGTTTTACTCTAAGATGATTTTGAAAGTAGCACTGTGCTCTGGGAATGCAGCTGCAATTTaGAAACACCATGTGGGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PLQRFYSKMILKVALCSGNAAAI*KHHVGS Trigger: GGAACCCACATGGTGTTTCAAAATTGCAGCTGCATT...CCCAGAGCACAGTGCTACTTTCAAAATCATCTTAGAGTAAAACCTTTGAAGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| CDS-3UTR CAA 90 bp | AGTCCAGCCCTGATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTAATGCAGCTGCAATTTaGAAACACCATGTGGGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SPALIYFRKRVPLVPLMINAAAI*KHHVGS Trigger: GGAACCCACATGGTGTTTCAAAATTGCAGCTGCATT...AATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAATCAGGGCTGGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
||
| CDS-3UTR CAA 90 bp | CTGATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTCAAAGGAAGATGCAGGGAGATAGCTaGATCCTCTTAGTGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LIYFRKRVPLVPLMIQRKMQGDS*ILLVLQ Trigger: CTGCAGCACTAAGAGGATCAAGCTATCTCCCTGCAT...CTTCCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAATCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
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| CDS-3UTR CAA 90 bp | ATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTCAAAGGAAGTGCATGCAGGGAGATAGCTaGATCCTCTTAGTGCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: IYFRKRVPLVPLMIQRKCMQGDS*ILLVLQ Trigger: CTGCAGCACTAAGAGGATCAAGCTATCTCCCTGCAT...GCACTTCCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
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| CDS-3UTR CAA 90 bp | AGTCCAGCCCTGATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTACAAAAGTCCAACAATaGGGCCAATCATCTTTCCTG | + |
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Preference number: 5 (lower is better) Translates to: SPALIYFRKRVPLVPLMITKVQQ*GQSSFL Trigger: CAGGAAAGATGATTGGCCCAATTGTTGGACTTTTGT...AATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAATCAGGGCTGGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
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| CDS-3UTR CAA 90 bp | GCCCTGATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTCAAAGGACAAAAGTCCAACAATaGGGCCAATCATCTTTCCTG | + |
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Preference number: 5 (lower is better) Translates to: ALIYFRKRVPLVPLMIQRTKVQQ*GQSSFL Trigger: CAGGAAAGATGATTGGCCCAATTGTTGGACTTTTGT...CCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAATCAGGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
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| CDS-3UTR CAA 90 bp | CTGATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTCAAAGGAAGAAAAAGTACTGCAGCTaGTTAGCACACTCAGGGCCT | + |
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Preference number: 5 (lower is better) Translates to: LIYFRKRVPLVPLMIQRKKKYCS*LAHSGP Trigger: AGGCCCTGAGTGTGCTAACAAGCTGCAGTACTTTTT...CTTCCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAATCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
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| CDS-3UTR CAA 90 bp | GCCCTGATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTCAAAGGTGCCAGCGAATATTCTaGTGCAAAATGCGTGTAATC | + |
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Preference number: 5 (lower is better) Translates to: ALIYFRKRVPLVPLMIQRCQRIF*CKMRVI Trigger: GATTACACGCATTTTGCACAAGAATATTCGCTGGCA...CCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAATCAGGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
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| CDS-3UTR CAA 90 bp | GCCCTGATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTCAAAGGGCCAACAGAAACATCTaGATCTTAGAAAAGCATCTG | + |
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Preference number: 5 (lower is better) Translates to: ALIYFRKRVPLVPLMIQRANRNI*ILEKHL Trigger: CAGATGCTTTTCTAAGATCAAGATGTTTCTGTTGGC...CCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAATCAGGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 ENSMUST00000153268.10 |
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| CDS-3UTR CAA 90 bp | AGTCCAGCCCTGATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTTGTCTACATAAATTCTaGCACAGAAGGATCCCAACA | + |
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Preference number: 5 (lower is better) Translates to: SPALIYFRKRVPLVPLMICLHKF*HRRIPT Trigger: TGTTGGGATCCTTCTGTGCAAGAATTTATGTAGACA...AATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAATCAGGGCTGGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
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| CDS-3UTR CAA 90 bp | AGTCCAGCCCTGATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTATCTCAAAGCTCCCATaGATAAGTCCAACTATAGAT | + |
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Preference number: 5 (lower is better) Translates to: SPALIYFRKRVPLVPLMIISKLP*ISPTID Trigger: ATCTATAGTTGGACTTATCAATGGGAGCTTTGAGAT...AATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAATCAGGGCTGGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 ENSMUST00000153268.10 |
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| CDS-3UTR CAA 90 bp | TATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTCAAAGGAAGTGCAATCTGTGCTTCTCCTCTTaGTCATTTTCAGTTCTATCC | + |
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Preference number: 5 (lower is better) Translates to: YFRKRVPLVPLMIQRKCNLCFSS*SFSVLS Trigger: GGATAGAACTGAAAATGACAAAGAGGAGAAGCACAG...ATTGCACTTCCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
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| CDS-3UTR CAA 90 bp | GCCCTGATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTCAAAGGAATATCCAATGCAGATaGGAGGTAAGTTACAAACAC | + |
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Preference number: 5 (lower is better) Translates to: ALIYFRKRVPLVPLMIQRNIQCR*EVSYKH Trigger: GTGTTTGTAACTTACCTCCAATCTGCATTGGATATT...CCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAATCAGGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
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| CDS-3UTR CAA 90 bp | GCCCTGATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTCAAAGGCTGAAGTTATTTATATaGTACATCCTACAGGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: ALIYFRKRVPLVPLMIQRLKLFI*YILQAP Trigger: AGGAGCCTGTAGGATGTACAATATAAATAACTTCAG...CCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAATCAGGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
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| CDS-3UTR CAA 90 bp | CTGATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTCAAAGGAAGGCCAACAGAAACATCTaGATCTTAGAAAAGCATCTG | + |
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Preference number: 5 (lower is better) Translates to: LIYFRKRVPLVPLMIQRKANRNI*ILEKHL Trigger: CAGATGCTTTTCTAAGATCAAGATGTTTCTGTTGGC...CTTCCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAATCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 ENSMUST00000153268.10 |
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| CDS-3UTR CAA 90 bp | TATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTCAAAGGAAGTGCAATTGTGGGGATATCGAATaGTCTCTCTATTTGTGTAAG | + |
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Preference number: 5 (lower is better) Translates to: YFRKRVPLVPLMIQRKCNCGDIE*SLYLCK Trigger: CTTACACAAATAGAGAGACAATTCGATATCCCCACA...ATTGCACTTCCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 ENSMUST00000153268.10 |
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| CDS-3UTR CAA 90 bp | ATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTCAAAGGAAGTGCTGTCTACATAAATTCTaGCACAGAAGGATCCCAACA | + |
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Preference number: 5 (lower is better) Translates to: IYFRKRVPLVPLMIQRKCCLHKF*HRRIPT Trigger: TGTTGGGATCCTTCTGTGCAAGAATTTATGTAGACA...GCACTTCCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
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| CDS-3UTR CAA 90 bp | ATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTCAAAGGAAGTGCATTCCTGAGAGTGATTaGGATACATATGCACATGTT | + |
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Preference number: 5 (lower is better) Translates to: IYFRKRVPLVPLMIQRKCIPESD*DTYAHV Trigger: AACATGTGCATATGTATCCAAATCACTCTCAGGAAT...GCACTTCCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 ENSMUST00000153268.10 |
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| CDS-3UTR CAA 90 bp | CTGATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTCAAAGGAAGATTCCTGAGAGTGATTaGGATACATATGCACATGTT | + |
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Preference number: 5 (lower is better) Translates to: LIYFRKRVPLVPLMIQRKIPESD*DTYAHV Trigger: AACATGTGCATATGTATCCAAATCACTCTCAGGAAT...CTTCCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAATCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 ENSMUST00000153268.10 |
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| CDS-3UTR CAA 90 bp | TATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTCAAAGGAAGTGCAATAATATCCAATGCAGATaGGAGGTAAGTTACAAACAC | + |
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Preference number: 5 (lower is better) Translates to: YFRKRVPLVPLMIQRKCNNIQCR*EVSYKH Trigger: GTGTTTGTAACTTACCTCCAATCTGCATTGGATATT...ATTGCACTTCCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
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| CDS-3UTR CAA 90 bp | ATTTATTTTAGGAAAAGAGTTCCTCTCGTACCTCTCATGATTCAAAGGAAGTGCCTGAAGTTATTTATATaGTACATCCTACAGGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: IYFRKRVPLVPLMIQRKCLKLFI*YILQAP Trigger: AGGAGCCTGTAGGATGTACAATATAAATAACTTCAG...GCACTTCCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTCCTAAAATAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 |
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| CDS CAA 90 bp | GTCTGTGTTCTGTTTTCCATACACAAGAAGCTGTTTGAGGACAAGTaGCTTGTAGGTGAAATCGTTGTTTCATATTCGTATCGGCCCATG | + |
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Preference number: 6 (lower is better) Translates to: VCVLFSIHKKLFEDK*LVGEIVVSYSYRPM Trigger: CATGGGCCGATACGAATATGAAACAACGATTTCACCTACAAGCAACTTGTCCTCAAACAGCTTCTTGTGTATGGAAAACAGAACACAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 ENSMUST00000128446.2 |
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| CDS CAA 72 bp | ATTTCATTTCTTTCACACACTCTGCAGGGTCTTGCGTaGGCTTTAAGGTCTGTGTTCTGTTTTCCATACACA | + |
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Preference number: 6 (lower is better) Translates to: ISFLSHTLQGLA*ALRSVFCFPYT Trigger: TGTGTATGGAAAACAGAACACAGACCTTAAAGCCAACGCAAGACCCTGCAGAGTGTGTGAAAGAAATGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 ENSMUST00000128446.2 |
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| CDS CAA 90 bp | GTCTGTGTTCTGTTTTCCATACACAAGAAGCTGTTTGAGGACAAGTaGCTTGTAGGTGAAATCGTTGTTTCATATTCGTATCAATCTCAA | + |
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Preference number: 6 (lower is better) Translates to: VCVLFSIHKKLFEDK*LVGEIVVSYSYQSQ Trigger: TTGAGATTGATACGAATATGAAACAACGATTTCACCTACAAGCAACTTGTCCTCAAACAGCTTCTTGTGTATGGAAAACAGAACACAGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
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| CDS CAA 72 bp | CTGTTTTCCATACACAAGAAGCTGTTTGAGGACAAGTaGCTTGTAGGTGAAATCGTTGTTTCATATTCGTAT | + |
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Preference number: 6 (lower is better) Translates to: LFSIHKKLFEDK*LVGEIVVSYSY Trigger: ATACGAATATGAAACAACGATTTCACCTACAAGCAACTTGTCCTCAAACAGCTTCTTGTGTATGGAAAACAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 ENSMUST00000128446.2 ENSMUST00000153268.10 |
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| CDS CAA 72 bp | CGTTGTTTCATATTCGTATCAATCTCAAAGCTCCCATaGATAAGTCCAACTATAGATGTGGGGATATCGAAT | + |
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Preference number: 6 (lower is better) Translates to: RCFIFVSISKLP*ISPTIDVGISN Trigger: ATTCGATATCCCCACATCTATAGTTGGACTTATCAATGGGAGCTTTGAGATTGATACGAATATGAAACAACG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153268.10 |
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| CDS CAA 72 bp | ATAATCAACAAAAGATTTCCAATCTCAAAGCTCCCATaGATAAGTCCAACTATAGATGTGGGGATATCGAAT | + |
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Preference number: 6 (lower is better) Translates to: IINKRFPISKLP*ISPTIDVGISN Trigger: ATTCGATATCCCCACATCTATAGTTGGACTTATCAATGGGAGCTTTGAGATTGGAAATCTTTTGTTGATTAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000081380.10 ENSMUST00000111825.10 ENSMUST00000128446.2 |
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