Pregenerated sensors for SLCO1A4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030237Ensembl transcript IDs: ENSMUST00000032364.14, ENSMUST00000163678.2, ENSMUST00000165990.8
Found 122 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCTCATGGCAAGGAGGTATGACAGAAAGCACCAGGCATTGTGACTaGAGCAGAAAGCTGAGATTTCACATCATTACCCAAAACACAAAG | + |
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Preference number: 1 (lower is better) Translates to: PSWQGGMTESTRHCD*SRKLRFHIITQNTK Trigger: CTTTGTGTTTTGGGTAATGATGTGAAATCTCAGCTTTCTGCTTCAGTCACAATGCCTGGTGCTTTCTGTCATACCTCCTTGCCATGAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165990.8 |
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| 3UTR TCA 90 bp | AAGTCCCTCATGGCAAGGAGGTATGACAGAAAGCACCAGGCATTGTaGCTGAAGCAGAAAGCTGAGATTTCACATCATTACCCAAAACAC | + |
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Preference number: 1 (lower is better) Translates to: KSLMARRYDRKHQAL*LKQKAEISHHYPKH Trigger: GTGTTTTGGGTAATGATGTGAAATCTCAGCTTTCTGCTTCAGTCACAATGCCTGGTGCTTTCTGTCATACCTCCTTGCCATGAGGGACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165990.8 |
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| 3UTR TCA 90 bp | AAAAGAAATGACCAACTGTGTGACAGGAGTAATGAAAGAAGGGACTaGAAACAGGAGATGGCCACTGTGGAGAGTCTAACCTTGGAAGTC | + |
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Preference number: 1 (lower is better) Translates to: KRNDQLCDRSNERRD*KQEMATVESLTLEV Trigger: GACTTCCAAGGTTAGACTCTCCACAGTGGCCATCTCCTGTTTTCAGTCCCTTCTTTCATTACTCCTGTCACACAGTTGGTCATTTCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165990.8 |
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| 3UTR TCA 90 bp | CCCAAAACACAAAGCAGAAACTATACTGGAAGTAGGGTGAAGCTTTaGACCCTCCTACATATTAAAGATGCGTGTCCAATCTTCCCTAAG | + |
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Preference number: 1 (lower is better) Translates to: PKTQSRNYTGSRVKL*TLLHIKDACPIFPK Trigger: CTTAGGGAAGATTGGACACGCATCTTTAATATGTAGGAGGGTTCAAAGCTTCACCCTACTTCCAGTATAGTTTCTGCTTTGTGTTTTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165990.8 |
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| 3UTR CCA 90 bp | TGTCAGGCTGAGGGGCAAACAGTTCTTTCCATTGAACCTTCTAGCTaGTCCCTCTTGAAAGCTTTTACTCTACGGTTATTATTAATGTTA | + |
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Preference number: 1 (lower is better) Translates to: CQAEGQTVLSIEPSS*SLLKAFTLRLLLML Trigger: TAACATTAATAATAACCGTAGAGTAAAAGCTTTCAAGAGGGACCAGCTAGAAGGTTCAATGGAAAGAACTGTTTGCCCCTCAGCCTGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165990.8 |
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| 3UTR-3UTR CCA 90 bp | GAAGGCAGCTTTAATGTTAAGGGTGGGGGTTTGCTACAGAAGTTTTCCCTGGGAGTGACATGTGCGTTCTaGTTCTGGCCTTGCACTGGC | + |
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Preference number: 2 (lower is better) Translates to: EGSFNVKGGGLLQKFSLGVTCAF*FWPCTG Trigger: GCCAGTGCAAGGCCAGAACCAGAACGCACATGTCAC...TCCCAGGGAAAACTTCTGTAGCAAACCCCCACCCTTAACATTAAAGCTGCCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
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| 3UTR-3UTR TCA 90 bp | ATGAATCCAGAGGGACTGAAGTCCCTCATGGCAAGGAGGTATGACAGAAAGCACAATGAAAGAAGGGACTaGAAACAGGAGATGGCCACT | + |
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Preference number: 2 (lower is better) Translates to: MNPEGLKSLMARRYDRKHNERRD*KQEMAT Trigger: AGTGGCCATCTCCTGTTTTCAGTCCCTTCTTTCATT...GTGCTTTCTGTCATACCTCCTTGCCATGAGGGACTTCAGTCCCTCTGGATTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165990.8 |
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| 3UTR-3UTR CCA 90 bp | GTTTGCTACAGAAGTTTTCCCTGGGAAAATCTTAAGTGCTACACCAACCTTCTGGTGACATGTGCGTTCTaGTTCTGGCCTTGCACTGGC | + |
|
Preference number: 2 (lower is better) Translates to: VCYRSFPWENLKCYTNLLVTCAF*FWPCTG Trigger: GCCAGTGCAAGGCCAGAACCAGAACGCACATGTCAC...CAGAAGGTTGGTGTAGCACTTAAGATTTTCCCAGGGAAAACTTCTGTAGCAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
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| 3UTR-3UTR TCA 90 bp | CTTTCCATTGAACCTTCTAGCTGGTCCCTCTTGAAAGCTTTTACTCTACGGTTAACTCTACCTTGTGGTTaGACTCAGGGCCTCACATGT | + |
|
Preference number: 2 (lower is better) Translates to: LSIEPSSWSLLKAFTLRLTLPCG*TQGLTC Trigger: ACATGTGAGGCCCTGAGTTCAACCACAAGGTAGAGT...TAACCGTAGAGTAAAAGCTTTCAAGAGGGACCAGCTAGAAGGTTCAATGGAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165990.8 |
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| 3UTR-3UTR GCA 90 bp | ATGAATCCAGAGGGACTGAAGTCCCTCATGGCAAGGAGGTATGACAGAAAGCACTGGGAAAATCTTAAGTaGTACACCAACCTTCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: MNPEGLKSLMARRYDRKHWENLK*YTNLLE Trigger: TTCCAGAAGGTTGGTGTAGCACTTAAGATTTTCCCA...GTGCTTTCTGTCATACCTCCTTGCCATGAGGGACTTCAGTCCCTCTGGATTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165990.8 |
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| 3UTR-3UTR TCA 90 bp | GTTTGCTACAGAAGTTTTCCCTGGGAAAATCTTAAGTGCTACACCAACCTTCTGCGATTGTACTTCTCATaGTTCAAAACTAGTGACATG | + |
|
Preference number: 2 (lower is better) Translates to: VCYRSFPWENLKCYTNLLRLYFS*FKTSDM Trigger: CATGTCACTAGTTTTGAATCATGAGAAGTACAATCG...CAGAAGGTTGGTGTAGCACTTAAGATTTTCCCAGGGAAAACTTCTGTAGCAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
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| 3UTR-3UTR TCA 90 bp | TACAGAAGTTTTCCCTGGGAAAATCTTAAGTGCTACACCAACCTTCTGGAAATGCGATTGTACTTCTCATaGTTCAAAACTAGTGACATG | + |
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Preference number: 2 (lower is better) Translates to: YRSFPWENLKCYTNLLEMRLYFS*FKTSDM Trigger: CATGTCACTAGTTTTGAATCATGAGAAGTACAATCG...CATTTCCAGAAGGTTGGTGTAGCACTTAAGATTTTCCCAGGGAAAACTTCTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
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| 3UTR-3UTR CCA 90 bp | TTTATTACTTTATCAGTTTACTCTACCTTGTGGTTGAACTCAGGGCCTCACATGTACAGAAGTTTTCCCTaGGAAAATCTTAAGTGCTAC | + |
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Preference number: 2 (lower is better) Translates to: FITLSVYSTLWLNSGPHMYRSFP*ENLKCY Trigger: GTAGCACTTAAGATTTTCCCAGGGAAAACTTCTGTA...CATGTGAGGCCCTGAGTTCAACCACAAGGTAGAGTAAACTGATAAAGTAATAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165990.8 |
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| 3UTR-3UTR CAA 90 bp | GAAGGCAGCTTTAATGTTAAGGGTGGGGGTTTGCTACAGAAGTTTTCCCTGGGAGTTCTGGTTCTGGCCTaGCACTGGCCAGTAGAAACC | + |
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Preference number: 3 (lower is better) Translates to: EGSFNVKGGGLLQKFSLGVLVLA*HWPVET Trigger: GGTTTCTACTGGCCAGTGCAAGGCCAGAACCAGAAC...TCCCAGGGAAAACTTCTGTAGCAAACCCCCACCCTTAACATTAAAGCTGCCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
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| 3UTR TCA 72 bp | TCCAGAGGGACTGAAGTCCCTCATGGCAAGGAGGTATaGCAGAAAGCACCAGGCATTGTGACTGAAGCAGAA | + |
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Preference number: 3 (lower is better) Translates to: SRGTEVPHGKEV*QKAPGIVTEAE Trigger: TTCTGCTTCAGTCACAATGCCTGGTGCTTTCTGTCATACCTCCTTGCCATGAGGGACTTCAGTCCCTCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165990.8 |
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| 3UTR-3UTR CAA 90 bp | GTTTGCTACAGAAGTTTTCCCTGGGAAAATCTTAAGTGCTACACCAACCTTCTGGTTCTGGTTCTGGCCTaGCACTGGCCAGTAGAAACC | + |
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Preference number: 3 (lower is better) Translates to: VCYRSFPWENLKCYTNLLVLVLA*HWPVET Trigger: GGTTTCTACTGGCCAGTGCAAGGCCAGAACCAGAAC...CAGAAGGTTGGTGTAGCACTTAAGATTTTCCCAGGGAAAACTTCTGTAGCAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
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| 3UTR TCA 72 bp | ATGGCAAGGAGGTATGACAGAAAGCACCAGGCATTGTaGCTGAAGCAGAAAGCTGAGATTTCACATCATTAC | + |
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Preference number: 3 (lower is better) Translates to: MARRYDRKHQAL*LKQKAEISHHY Trigger: GTAATGATGTGAAATCTCAGCTTTCTGCTTCAGTCACAATGCCTGGTGCTTTCTGTCATACCTCCTTGCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165990.8 |
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| 3UTR-3UTR CAA 90 bp | GTGGTTGAACTCAGGGCCTCACATGTATTAGGCAATCACATATCCACCGAGATAACAAAGTTGCCTATTTaGAGCTCTAAATACCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: VVELRASHVLGNHISTEITKLPI*SSKYLQ Trigger: CTGGAGGTATTTAGAGCTCAAAATAGGCAACTTTGT...TATCTCGGTGGATATGTGATTGCCTAATACATGTGAGGCCCTGAGTTCAACCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165990.8 |
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| 3UTR TCA 72 bp | CAGAAAGCACCAGGCATTGTGACTGAAGCAGAAAGCTaGGATTTCACATCATTACCCAAAACACAAAGCAGA | + |
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Preference number: 3 (lower is better) Translates to: QKAPGIVTEAES*DFTSLPKTQSR Trigger: TCTGCTTTGTGTTTTGGGTAATGATGTGAAATCTCAGCTTTCTGCTTCAGTCACAATGCCTGGTGCTTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165990.8 |
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| 3UTR CCA 72 bp | GAGGGGCAAACAGTTCTTTCCATTGAACCTTCTAGCTaGTCCCTCTTGAAAGCTTTTACTCTACGGTTATTA | + |
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Preference number: 3 (lower is better) Translates to: EGQTVLSIEPSS*SLLKAFTLRLL Trigger: TAATAACCGTAGAGTAAAAGCTTTCAAGAGGGACCAGCTAGAAGGTTCAATGGAAAGAACTGTTTGCCCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165990.8 |
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| 3UTR TCA 72 bp | CCAAAACACAAAGCAGAAACTATACTGGAAGTAGGGTaGAGCTTTGAACCCTCCTACATATTAAAGATGCGT | + |
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Preference number: 3 (lower is better) Translates to: PKHKAETILEVG*SFEPSYILKMR Trigger: ACGCATCTTTAATATGTAGGAGGGTTCAAAGCTTCACCCTACTTCCAGTATAGTTTCTGCTTTGTGTTTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165990.8 |
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| 3UTR GCA 72 bp | AGAGTTATTACTAGAAACCACATGTCCAAATGTCTGTaGGTAAGAGGGATATTTCTCATTCAAACAACCACA | + |
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Preference number: 3 (lower is better) Translates to: RVITRNHMSKCL*VRGIFLIQTTT Trigger: TGTGGTTGTTTGAATGAGAAATATCCCTCTTACGCACAGACATTTGGACATGTGGTTTCTAGTAATAACTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165990.8 |
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| CDS-3UTR GCA 90 bp | ATGAATCCAGAGGGACTGAAGTCCCTCATGGCAAGGAGGTATGACAGAAAGCACATCATACATCCTGCATaGCCCTGGCTCACCACATTT | + |
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Preference number: 4 (lower is better) Translates to: MNPEGLKSLMARRYDRKHIIHPA*PWLTTF Trigger: AAATGTGGTGAGCCAGGGGCATGCAGGATGTATGAT...GTGCTTTCTGTCATACCTCCTTGCCATGAGGGACTTCAGTCCCTCTGGATTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165990.8 |
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| CDS-3UTR GCA 90 bp | ATGAATCCAGAGGGACTGAAGTCCCTCATGGCAAGGAGGTATGACAGAAAGCACTTATATCATACATCCTaGATGCCCCTGGCTCACCAC | + |
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Preference number: 4 (lower is better) Translates to: MNPEGLKSLMARRYDRKHLYHTS*MPLAHH Trigger: GTGGTGAGCCAGGGGCATGCAGGATGTATGATATAA...GTGCTTTCTGTCATACCTCCTTGCCATGAGGGACTTCAGTCCCTCTGGATTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165990.8 |
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| CDS-3UTR CCA 90 bp | TTGTTCTTTTCTCCTGCCATGTTGATCCCAGGGATCACAACAACCTTGTCAGGCGCCCAACTACAGACGTaGGGATACCGAATTGTCTCT | + |
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Preference number: 4 (lower is better) Translates to: LFFSPAMLIPGITTTLSGAQLQT*GYRIVS Trigger: AGAGACAATTCGGTATCCCCACGTCTGTAGTTGGGC...GCCTGACAAGGTTGTTGTGATCCCTGGGATCAACATGGCAGGAGAAAAGAACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165990.8 |
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| CDS-3UTR TCA 90 bp | GTTTGCTACAGAAGTTTTCCCTGGGAAAATCTTAAGTGCTACACCAACCTTCTGTGCAGGATCTGTGTCTaGAGAGTCGATGTCCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: VCYRSFPWENLKCYTNLLCRICV*RVDVPR Trigger: CCTGGGGACATCGACTCTTCAGACACAGATCCTGCA...CAGAAGGTTGGTGTAGCACTTAAGATTTTCCCAGGGAAAACTTCTGTAGCAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
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| CDS-3UTR CCA 90 bp | GAAGGCAGCTTTAATGTTAAGGGTGGGGGTTTGCTACAGAAGTTTTCCCTGGGACTCCTTCATAAGAGGTaGTTAATCCAGCAACTGGGA | + |
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Preference number: 4 (lower is better) Translates to: EGSFNVKGGGLLQKFSLGLLHKR*LIQQLG Trigger: TCCCAGTTGCTGGATTAACCACCTCTTATGAAGGAG...TCCCAGGGAAAACTTCTGTAGCAAACCCCCACCCTTAACATTAAAGCTGCCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
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| CDS-3UTR TCA 90 bp | TGTACTTCTCATGATTCAAAACTAGTGACATGTGCGTTCTGGTTCTGGCCTTGCAAATACCCAAGGGCATaGTGGGAGTTTCACCCATTC | + |
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Preference number: 4 (lower is better) Translates to: CTSHDSKLVTCAFWFWPCKYPRA*WEFHPF Trigger: GAATGGGTGAAACTCCCATCATGCCCTTGGGTATTT...GCAAGGCCAGAACCAGAACGCACATGTCACTAGTTTTGAATCATGAGAAGTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
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| CDS-3UTR TCA 90 bp | GAAGGCAGCTTTAATGTTAAGGGTGGGGGTTTGCTACAGAAGTTTTCCCTGGGACTCCCAGCGAGAAGATaGAACAGCCAATTATTGATA | + |
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Preference number: 4 (lower is better) Translates to: EGSFNVKGGGLLQKFSLGLPARR*NSQLLI Trigger: TATCAATAATTGGCTGTTTCATCTTCTCGCTGGGAG...TCCCAGGGAAAACTTCTGTAGCAAACCCCCACCCTTAACATTAAAGCTGCCTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
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| CDS-3UTR TCA 90 bp | TTTATTACTTTATCAGTTTACTCTACCTTGTGGTTGAACTCAGGGCCTCACATGTGCAGGATCTGTGTCTaGAGAGTCGATGTCCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: FITLSVYSTLWLNSGPHMCRICV*RVDVPR Trigger: CCTGGGGACATCGACTCTTCAGACACAGATCCTGCA...CATGTGAGGCCCTGAGTTCAACCACAAGGTAGAGTAAACTGATAAAGTAATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165990.8 |
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| CDS-3UTR GCA 90 bp | TGTACTTCTCATGATTCAAAACTAGTGACATGTGCGTTCTGGTTCTGGCCTTGCCACTCTGTTGGGTCTTaGGTTGGCTTTAAGGTCTGT | + |
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Preference number: 4 (lower is better) Translates to: CTSHDSKLVTCAFWFWPCHSVGS*VGFKVC Trigger: ACAGACCTTAAAGCCAACGCAAGACCCAACAGAGTG...GCAAGGCCAGAACCAGAACGCACATGTCACTAGTTTTGAATCATGAGAAGTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
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| CDS-3UTR GCA 90 bp | ATGAATCCAGAGGGACTGAAGTCCCTCATGGCAAGGAGGTATGACAGAAAGCACAGCTACACTTTGTGTTaGAGTCAGCAAGGACATTAT | + |
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Preference number: 4 (lower is better) Translates to: MNPEGLKSLMARRYDRKHSYTLC*SQQGHY Trigger: ATAATGTCCTTGCTGACTGCAACACAAAGTGTAGCT...GTGCTTTCTGTCATACCTCCTTGCCATGAGGGACTTCAGTCCCTCTGGATTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165990.8 |
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| CDS-3UTR GCA 90 bp | TGTACTTCTCATGATTCAAAACTAGTGACATGTGCGTTCTGGTTCTGGCCTTGCATCATACATCCTGCATaGCCCTGGCTCACCACATTT | + |
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Preference number: 4 (lower is better) Translates to: CTSHDSKLVTCAFWFWPCIIHPA*PWLTTF Trigger: AAATGTGGTGAGCCAGGGGCATGCAGGATGTATGAT...GCAAGGCCAGAACCAGAACGCACATGTCACTAGTTTTGAATCATGAGAAGTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
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| CDS-3UTR CCA 90 bp | GAAGGCAGCTTTAATGTTAAGGGTGGGGGTTTGCTACAGAAGTTTTCCCTGGGATGTGCTTCTCCTCTTTaGCATTTTCAGTTCCATCTC | + |
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Preference number: 4 (lower is better) Translates to: EGSFNVKGGGLLQKFSLGCASPL*HFQFHL Trigger: GAGATGGAACTGAAAATGCCAAAGAGGAGAAGCACA...TCCCAGGGAAAACTTCTGTAGCAAACCCCCACCCTTAACATTAAAGCTGCCTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
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| CDS-3UTR CCA 90 bp | ATGAATCCAGAGGGACTGAAGTCCCTCATGGCAAGGAGGTATGACAGAAAGCACATGTCCCCAGGGAATTaGAATTTCCTCATAAGGATT | + |
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Preference number: 4 (lower is better) Translates to: MNPEGLKSLMARRYDRKHMSPGN*NFLIRI Trigger: AATCCTTATGAGGAAATTCCAATTCCCTGGGGACAT...GTGCTTTCTGTCATACCTCCTTGCCATGAGGGACTTCAGTCCCTCTGGATTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165990.8 |
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| CDS-3UTR GCA 90 bp | GAAGGCAGCTTTAATGTTAAGGGTGGGGGTTTGCTACAGAAGTTTTCCCTGGGAGTGGATTTTCCATATTaGTGTTCCAGATACTTAGGC | + |
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Preference number: 4 (lower is better) Translates to: EGSFNVKGGGLLQKFSLGVDFPY*CSRYLG Trigger: GCCTAAGTATCTGGAACAGCAATATGGAAAATCCAC...TCCCAGGGAAAACTTCTGTAGCAAACCCCCACCCTTAACATTAAAGCTGCCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
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| CDS-3UTR GCA 90 bp | GTTTGCTACAGAAGTTTTCCCTGGGAAAATCTTAAGTGCTACACCAACCTTCTGTTATATCATACATCCTaGATGCCCCTGGCTCACCAC | + |
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Preference number: 4 (lower is better) Translates to: VCYRSFPWENLKCYTNLLLYHTS*MPLAHH Trigger: GTGGTGAGCCAGGGGCATGCAGGATGTATGATATAA...CAGAAGGTTGGTGTAGCACTTAAGATTTTCCCAGGGAAAACTTCTGTAGCAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
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| CDS-3UTR CCA 90 bp | TACAGAAGTTTTCCCTGGGAAAATCTTAAGTGCTACACCAACCTTCTGGAAATGGCCCAACTACAGACGTaGGGATACCGAATTGTCTCT | + |
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Preference number: 4 (lower is better) Translates to: YRSFPWENLKCYTNLLEMAQLQT*GYRIVS Trigger: AGAGACAATTCGGTATCCCCACGTCTGTAGTTGGGC...CATTTCCAGAAGGTTGGTGTAGCACTTAAGATTTTCCCAGGGAAAACTTCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
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| CDS-3UTR CCA 90 bp | GAAGGCAGCTTTAATGTTAAGGGTGGGGGTTTGCTACAGAAGTTTTCCCTGGGAATGTCCCCAGGGAATTaGAATTTCCTCATAAGGATT | + |
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Preference number: 4 (lower is better) Translates to: EGSFNVKGGGLLQKFSLGMSPGN*NFLIRI Trigger: AATCCTTATGAGGAAATTCCAATTCCCTGGGGACAT...TCCCAGGGAAAACTTCTGTAGCAAACCCCCACCCTTAACATTAAAGCTGCCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
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| CDS-3UTR TCA 90 bp | TTGTTCTTTTCTCCTGCCATGTTGATCCCAGGGATCACAACAACCTTGTCAGGCAATTGTCTCTCTATTTaGGTGAGCATGGAATTCATG | + |
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Preference number: 4 (lower is better) Translates to: LFFSPAMLIPGITTTLSGNCLSI*VSMEFM Trigger: CATGAATTCCATGCTCACTCAAATAGAGAGACAATT...GCCTGACAAGGTTGTTGTGATCCCTGGGATCAACATGGCAGGAGAAAAGAACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165990.8 |
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| CDS-3UTR TCA 90 bp | TGTACTTCTCATGATTCAAAACTAGTGACATGTGCGTTCTGGTTCTGGCCTTGCACACACAAAGCTATTTaGGGACAAGTTGCTTGTAGG | + |
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Preference number: 4 (lower is better) Translates to: CTSHDSKLVTCAFWFWPCTHKAI*GQVACR Trigger: CCTACAAGCAACTTGTCCTCAAATAGCTTTGTGTGT...GCAAGGCCAGAACCAGAACGCACATGTCACTAGTTTTGAATCATGAGAAGTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
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| CDS-3UTR TCA 90 bp | TGTACTTCTCATGATTCAAAACTAGTGACATGTGCGTTCTGGTTCTGGCCTTGCCTCCCAGCGAGAAGATaGAACAGCCAATTATTGATA | + |
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Preference number: 4 (lower is better) Translates to: CTSHDSKLVTCAFWFWPCLPARR*NSQLLI Trigger: TATCAATAATTGGCTGTTTCATCTTCTCGCTGGGAG...GCAAGGCCAGAACCAGAACGCACATGTCACTAGTTTTGAATCATGAGAAGTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
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| CDS-3UTR TCA 90 bp | TACAGAAGTTTTCCCTGGGAAAATCTTAAGTGCTACACCAACCTTCTGGAAATGTGCTTTCCTTCGCAGTaGGCTTCATTTCTGCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: YRSFPWENLKCYTNLLEMCFPSQ*ASFLQD Trigger: ATCCTGCAGAAATGAAGCTCACTGCGAAGGAAAGCA...CATTTCCAGAAGGTTGGTGTAGCACTTAAGATTTTCCCAGGGAAAACTTCTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
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| CDS-3UTR GCA 90 bp | TACAGAAGTTTTCCCTGGGAAAATCTTAAGTGCTACACCAACCTTCTGGAAATGCACTCTGTTGGGTCTTaGGTTGGCTTTAAGGTCTGT | + |
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Preference number: 4 (lower is better) Translates to: YRSFPWENLKCYTNLLEMHSVGS*VGFKVC Trigger: ACAGACCTTAAAGCCAACGCAAGACCCAACAGAGTG...CATTTCCAGAAGGTTGGTGTAGCACTTAAGATTTTCCCAGGGAAAACTTCTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
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| CDS-3UTR CCA 90 bp | CTTTCCATTGAACCTTCTAGCTGGTCCCTCTTGAAAGCTTTTACTCTACGGTTACTCCTTCATAAGAGGTaGTTAATCCAGCAACTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSIEPSSWSLLKAFTLRLLLHKR*LIQQLG Trigger: TCCCAGTTGCTGGATTAACCACCTCTTATGAAGGAG...TAACCGTAGAGTAAAAGCTTTCAAGAGGGACCAGCTAGAAGGTTCAATGGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165990.8 |
||
| CDS-3UTR TCA 90 bp | CTTTCCATTGAACCTTCTAGCTGGTCCCTCTTGAAAGCTTTTACTCTACGGTTAACACACAAAGCTATTTaGGGACAAGTTGCTTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSIEPSSWSLLKAFTLRLTHKAI*GQVACR Trigger: CCTACAAGCAACTTGTCCTCAAATAGCTTTGTGTGT...TAACCGTAGAGTAAAAGCTTTCAAGAGGGACCAGCTAGAAGGTTCAATGGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165990.8 |
||
| CDS-3UTR TCA 90 bp | TTTATTACTTTATCAGTTTACTCTACCTTGTGGTTGAACTCAGGGCCTCACATGTGCTTTCCTTCGCAGTaGGCTTCATTTCTGCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: FITLSVYSTLWLNSGPHMCFPSQ*ASFLQD Trigger: ATCCTGCAGAAATGAAGCTCACTGCGAAGGAAAGCA...CATGTGAGGCCCTGAGTTCAACCACAAGGTAGAGTAAACTGATAAAGTAATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165990.8 |
||
| CDS-3UTR GCA 90 bp | TACAGAAGTTTTCCCTGGGAAAATCTTAAGTGCTACACCAACCTTCTGGAAATGTCTGACCCCATGGGTTaGAACCTCTTTCTCAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: YRSFPWENLKCYTNLLEMSDPMG*NLFLRF Trigger: AAATCTGAGAAAGAGGTTGCAACCCATGGGGTCAGA...CATTTCCAGAAGGTTGGTGTAGCACTTAAGATTTTCCCAGGGAAAACTTCTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
||
| CDS-3UTR GCA 90 bp | TGTACTTCTCATGATTCAAAACTAGTGACATGTGCGTTCTGGTTCTGGCCTTGCGTGGATTTTCCATATTaGTGTTCCAGATACTTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: CTSHDSKLVTCAFWFWPCVDFPY*CSRYLG Trigger: GCCTAAGTATCTGGAACAGCAATATGGAAAATCCAC...GCAAGGCCAGAACCAGAACGCACATGTCACTAGTTTTGAATCATGAGAAGTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
||
| CDS-3UTR GCA 90 bp | TTTATTACTTTATCAGTTTACTCTACCTTGTGGTTGAACTCAGGGCCTCACATGTCTGACCCCATGGGTTaGAACCTCTTTCTCAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: FITLSVYSTLWLNSGPHMSDPMG*NLFLRF Trigger: AAATCTGAGAAAGAGGTTGCAACCCATGGGGTCAGA...CATGTGAGGCCCTGAGTTCAACCACAAGGTAGAGTAAACTGATAAAGTAATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165990.8 |
||
| CDS-3UTR CCA 90 bp | TGTACTTCTCATGATTCAAAACTAGTGACATGTGCGTTCTGGTTCTGGCCTTGCCAATCAAAGGGCCAATaGTCATTCCTGTTTCTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: CTSHDSKLVTCAFWFWPCQSKGQ*SFLFLK Trigger: TTTTAGAAACAGGAATGACCATTGGCCCTTTGATTG...GCAAGGCCAGAACCAGAACGCACATGTCACTAGTTTTGAATCATGAGAAGTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
||
| CDS-3UTR TCA 90 bp | GTTTGCTACAGAAGTTTTCCCTGGGAAAATCTTAAGTGCTACACCAACCTTCTGAATTGTCTCTCTATTTaGGTGAGCATGGAATTCATG | + |
|
Preference number: 4 (lower is better) Translates to: VCYRSFPWENLKCYTNLLNCLSI*VSMEFM Trigger: CATGAATTCCATGCTCACTCAAATAGAGAGACAATT...CAGAAGGTTGGTGTAGCACTTAAGATTTTCCCAGGGAAAACTTCTGTAGCAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
||
| CDS-3UTR TCA 90 bp | CTTTCCATTGAACCTTCTAGCTGGTCCCTCTTGAAAGCTTTTACTCTACGGTTAAGGCATGAAGGTAAATaGATTGATAAAGGCATTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LSIEPSSWSLLKAFTLRLRHEGK*IDKGID Trigger: GTCAATGCCTTTATCAATTCATTTACCTTCATGCCT...TAACCGTAGAGTAAAAGCTTTCAAGAGGGACCAGCTAGAAGGTTCAATGGAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165990.8 |
||
| CDS-3UTR GCA 90 bp | TACAGAAGTTTTCCCTGGGAAAATCTTAAGTGCTACACCAACCTTCTGGAAATGGTCTACATAAATGTTTaGACAGGAAGATCCCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: YRSFPWENLKCYTNLLEMVYINV*TGRSQQ Trigger: CTGTTGGGATCTTCCTGTGCAAACATTTATGTAGAC...CATTTCCAGAAGGTTGGTGTAGCACTTAAGATTTTCCCAGGGAAAACTTCTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
||
| CDS-3UTR GCA 90 bp | TACAGAAGTTTTCCCTGGGAAAATCTTAAGTGCTACACCAACCTTCTGGAAATGAGCTACACTTTGTGTTaGAGTCAGCAAGGACATTAT | + |
|
Preference number: 4 (lower is better) Translates to: YRSFPWENLKCYTNLLEMSYTLC*SQQGHY Trigger: ATAATGTCCTTGCTGACTGCAACACAAAGTGTAGCT...CATTTCCAGAAGGTTGGTGTAGCACTTAAGATTTTCCCAGGGAAAACTTCTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
||
| CDS-3UTR TCA 90 bp | TACAGAAGTTTTCCCTGGGAAAATCTTAAGTGCTACACCAACCTTCTGGAAATGAGGCATGAAGGTAAATaGATTGATAAAGGCATTGAC | + |
|
Preference number: 4 (lower is better) Translates to: YRSFPWENLKCYTNLLEMRHEGK*IDKGID Trigger: GTCAATGCCTTTATCAATTCATTTACCTTCATGCCT...CATTTCCAGAAGGTTGGTGTAGCACTTAAGATTTTCCCAGGGAAAACTTCTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
||
| CDS-3UTR GCA 90 bp | TACAGAAGTTTTCCCTGGGAAAATCTTAAGTGCTACACCAACCTTCTGGAAATGCCAGAATCCTATGTATaGAGCTTTCTTGACAGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: YRSFPWENLKCYTNLLEMPESYV*SFLDSN Trigger: ATTACTGTCAAGAAAGCTGCATACATAGGATTCTGG...CATTTCCAGAAGGTTGGTGTAGCACTTAAGATTTTCCCAGGGAAAACTTCTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
||
| CDS-3UTR GCA 90 bp | GTTTGCTACAGAAGTTTTCCCTGGGAAAATCTTAAGTGCTACACCAACCTTCTGTTCCTGATGACTGAATaGAGCTACAATTTTGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: VCYRSFPWENLKCYTNLLFLMTE*SYNFET Trigger: TGTTTCAAAATTGTAGCTGCATTCAGTCATCAGGAA...CAGAAGGTTGGTGTAGCACTTAAGATTTTCCCAGGGAAAACTTCTGTAGCAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
||
| CDS-3UTR CCA 90 bp | TACAGAAGTTTTCCCTGGGAAAATCTTAAGTGCTACACCAACCTTCTGGAAATGCAATCAAAGGGCCAATaGTCATTCCTGTTTCTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: YRSFPWENLKCYTNLLEMQSKGQ*SFLFLK Trigger: TTTTAGAAACAGGAATGACCATTGGCCCTTTGATTG...CATTTCCAGAAGGTTGGTGTAGCACTTAAGATTTTCCCAGGGAAAACTTCTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
||
| CDS-3UTR GCA 90 bp | TTTATTACTTTATCAGTTTACTCTACCTTGTGGTTGAACTCAGGGCCTCACATGCCAGAATCCTATGTATaGAGCTTTCTTGACAGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: FITLSVYSTLWLNSGPHMPESYV*SFLDSN Trigger: ATTACTGTCAAGAAAGCTGCATACATAGGATTCTGG...CATGTGAGGCCCTGAGTTCAACCACAAGGTAGAGTAAACTGATAAAGTAATAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165990.8 |
||
| CDS-3UTR GCA 90 bp | TACAGAAGTTTTCCCTGGGAAAATCTTAAGTGCTACACCAACCTTCTGGAAATGTTCCTGATGACTGAATaGAGCTACAATTTTGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: YRSFPWENLKCYTNLLEMFLMTE*SYNFET Trigger: TGTTTCAAAATTGTAGCTGCATTCAGTCATCAGGAA...CATTTCCAGAAGGTTGGTGTAGCACTTAAGATTTTCCCAGGGAAAACTTCTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
||
| 3UTR CAA 72 bp | ACAGTTCTTTCCATTGAACCTTCTAGCTGGTCCCTCTaGAAAGCTTTTACTCTACGGTTATTATTAATGTTA | + |
|
Preference number: 4 (lower is better) Translates to: TVLSIEPSSWSL*KAFTLRLLLML Trigger: TAACATTAATAATAACCGTAGAGTAAAAGCTTTCAAGAGGGACCAGCTAGAAGGTTCAATGGAAAGAACTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165990.8 |
||
| CDS-3UTR CAA 90 bp | ATGAATCCAGAGGGACTGAAGTCCCTCATGGCAAGGAGGTATGACAGAAAGCACGTGCAGGGAGAAAGCTaGCTCCTCTTAGAGCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: MNPEGLKSLMARRYDRKHVQGES*LLLEQQ Trigger: CTGCTGCTCTAAGAGGAGCAAGCTTTCTCCCTGCAC...GTGCTTTCTGTCATACCTCCTTGCCATGAGGGACTTCAGTCCCTCTGGATTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165990.8 |
||
| CDS-3UTR CAA 90 bp | GAGAGTCTAACCTTGGAAGTCTTGACTAGAGTAAAGCAGAGAGAGTTAGCACTCGCACACTCAGGACCCTaGTCACACAGGCCCAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: ESLTLEVLTRVKQRELALAHSGP*SHRPRT Trigger: AGTCCTGGGCCTGTGTGACAAGGGTCCTGAGTGTGC...GAGTGCTAACTCTCTCTGCTTTACTCTAGTCAAGACTTCCAAGGTTAGACTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165990.8 |
||
| CDS-3UTR CAA 90 bp | GTTTGCTACAGAAGTTTTCCCTGGGAAAATCTTAAGTGCTACACCAACCTTCTGGCACACTCAGGACCCTaGTCACACAGGCCCAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: VCYRSFPWENLKCYTNLLAHSGP*SHRPRT Trigger: AGTCCTGGGCCTGTGTGACAAGGGTCCTGAGTGTGC...CAGAAGGTTGGTGTAGCACTTAAGATTTTCCCAGGGAAAACTTCTGTAGCAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
||
| CDS CCA 90 bp | AGCCAATCCACCAAGCACCGACCCAGCGTGTATCAGTGGGAGTTATaGTCAGGTCATCTGTATTCACAGACCCAGTGTCTACATAAATGT | + |
|
Preference number: 5 (lower is better) Translates to: SQSTKHRPSVYQWEL*SGHLYSQTQCLHKC Trigger: ACATTTATGTAGACACTGGGTCTGTGAATACAGATGACCTGACCATAACTCCCACTGATACACGCTGGGTCGGTGCTTGGTGGATTGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
||
| CDS-3UTR CAA 90 bp | GAAGGCAGCTTTAATGTTAAGGGTGGGGGTTTGCTACAGAAGTTTTCCCTGGGAGACTTCTGTGCACATTaGTGCACTTGCTTTCCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: EGSFNVKGGGLLQKFSLGDFCAH*CTCFPS Trigger: CGAAGGAAAGCAAGTGCACAAATGTGCACAGAAGTC...TCCCAGGGAAAACTTCTGTAGCAAACCCCCACCCTTAACATTAAAGCTGCCTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
||
| CDS TCA 90 bp | CTTGCTTTCCTTCGCAGTGAGCTTCATTTCTGCAGGATCTGTGTCTaGAGAGTCGATGTCCCCAGGGAATTGGAATTTCCTCATAAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LAFLRSELHFCRICV*RVDVPRELEFPHKD Trigger: ATCCTTATGAGGAAATTCCAATTCCCTGGGGACATCGACTCTTCAGACACAGATCCTGCAGAAATGAAGCTCACTGCGAAGGAAAGCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
||
| CDS-3UTR CAA 90 bp | GAAGGCAGCTTTAATGTTAAGGGTGGGGGTTTGCTACAGAAGTTTTCCCTGGGATTAAGCAGCTACACTTaGTGTTGCAGTCAGCAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: EGSFNVKGGGLLQKFSLGLSSYT*CCSQQG Trigger: TCCTTGCTGACTGCAACACAAAGTGTAGCTGCTTAA...TCCCAGGGAAAACTTCTGTAGCAAACCCCCACCCTTAACATTAAAGCTGCCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
||
| CDS-3UTR CAA 90 bp | TACAGAAGTTTTCCCTGGGAAAATCTTAAGTGCTACACCAACCTTCTGGAAATGGTGCAGGGAGAAAGCTaGCTCCTCTTAGAGCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: YRSFPWENLKCYTNLLEMVQGES*LLLEQQ Trigger: CTGCTGCTCTAAGAGGAGCAAGCTTTCTCCCTGCAC...CATTTCCAGAAGGTTGGTGTAGCACTTAAGATTTTCCCAGGGAAAACTTCTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
||
| CDS GCA 90 bp | GGTCAGGTCATCTGTATTCACAGACCCAGTGTCTACATAAATGTTTaGACAGGAAGATCCCAACAGAAGTCCAATCAAAGGGCCAATGGT | + |
|
Preference number: 5 (lower is better) Translates to: GQVICIHRPSVYINV*TGRSQQKSNQRANG Trigger: ACCATTGGCCCTTTGATTGGACTTCTGTTGGGATCTTCCTGTGCAAACATTTATGTAGACACTGGGTCTGTGAATACAGATGACCTGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
||
| CDS-3UTR CAA 90 bp | TGTACTTCTCATGATTCAAAACTAGTGACATGTGCGTTCTGGTTCTGGCCTTGCCGTGGGGATACCGAATaGTCTCTCTATTTGAGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: CTSHDSKLVTCAFWFWPCRGDTE*SLYLSE Trigger: CTCACTCAAATAGAGAGACAATTCGGTATCCCCACG...GCAAGGCCAGAACCAGAACGCACATGTCACTAGTTTTGAATCATGAGAAGTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
||
| CDS-3UTR CAA 90 bp | TGTACTTCTCATGATTCAAAACTAGTGACATGTGCGTTCTGGTTCTGGCCTTGCCTTTCACACACTCTGTaGGGTCTTGCGTTGGCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: CTSHDSKLVTCAFWFWPCLSHTL*GLALAL Trigger: TAAAGCCAACGCAAGACCCAACAGAGTGTGTGAAAG...GCAAGGCCAGAACCAGAACGCACATGTCACTAGTTTTGAATCATGAGAAGTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
||
| CDS-3UTR CAA 90 bp | GTTTGCTACAGAAGTTTTCCCTGGGAAAATCTTAAGTGCTACACCAACCTTCTGTGCACATTTGTGCACTaGCTTTCCTTCGCAGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VCYRSFPWENLKCYTNLLCTFVH*LSFAVS Trigger: GCTCACTGCGAAGGAAAGCAAGTGCACAAATGTGCA...CAGAAGGTTGGTGTAGCACTTAAGATTTTCCCAGGGAAAACTTCTGTAGCAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
||
| CDS-3UTR CAA 90 bp | CTTTCCATTGAACCTTCTAGCTGGTCCCTCTTGAAAGCTTTTACTCTACGGTTATGCACATTTGTGCACTaGCTTTCCTTCGCAGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LSIEPSSWSLLKAFTLRLCTFVH*LSFAVS Trigger: GCTCACTGCGAAGGAAAGCAAGTGCACAAATGTGCA...TAACCGTAGAGTAAAAGCTTTCAAGAGGGACCAGCTAGAAGGTTCAATGGAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165990.8 |
||
| CDS GCA 90 bp | AGCTTAGTTTTCCGTTCTCCATCATTCTGCATCGTAGGACTTCTGTaGACATTTGTGCACTTGCTTTCCTTCGCAGTGAGCTTCATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SLVFRSPSFCIVGLL*TFVHLLSFAVSFIS Trigger: AGAAATGAAGCTCACTGCGAAGGAAAGCAAGTGCACAAATGTGCACAGAAGTCCTACGATGCAGAATGATGGAGAACGGAAAACTAAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
||
| CDS-3UTR CAA 90 bp | TGTACTTCTCATGATTCAAAACTAGTGACATGTGCGTTCTGGTTCTGGCCTTGCAGAAATGCCTTGATCTaGGAAAAGCATCTGACCCCA | + |
|
Preference number: 5 (lower is better) Translates to: CTSHDSKLVTCAFWFWPCRNALI*EKHLTP Trigger: TGGGGTCAGATGCTTTTCCAAGATCAAGGCATTTCT...GCAAGGCCAGAACCAGAACGCACATGTCACTAGTTTTGAATCATGAGAAGTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
||
| CDS-3UTR CAA 90 bp | GAGAGTCTAACCTTGGAAGTCTTGACTAGAGTAAAGCAGAGAGAGTTAGCACTCAGAAATGCCTTGATCTaGGAAAAGCATCTGACCCCA | + |
|
Preference number: 5 (lower is better) Translates to: ESLTLEVLTRVKQRELALRNALI*EKHLTP Trigger: TGGGGTCAGATGCTTTTCCAAGATCAAGGCATTTCT...GAGTGCTAACTCTCTCTGCTTTACTCTAGTCAAGACTTCCAAGGTTAGACTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165990.8 |
||
| CDS-3UTR CAA 90 bp | GTTTGCTACAGAAGTTTTCCCTGGGAAAATCTTAAGTGCTACACCAACCTTCTGCGTGGGGATACCGAATaGTCTCTCTATTTGAGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: VCYRSFPWENLKCYTNLLRGDTE*SLYLSE Trigger: CTCACTCAAATAGAGAGACAATTCGGTATCCCCACG...CAGAAGGTTGGTGTAGCACTTAAGATTTTCCCAGGGAAAACTTCTGTAGCAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
||
| CDS-3UTR CAA 90 bp | GTTTGCTACAGAAGTTTTCCCTGGGAAAATCTTAAGTGCTACACCAACCTTCTGCTTTCACACACTCTGTaGGGTCTTGCGTTGGCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: VCYRSFPWENLKCYTNLLLSHTL*GLALAL Trigger: TAAAGCCAACGCAAGACCCAACAGAGTGTGTGAAAG...CAGAAGGTTGGTGTAGCACTTAAGATTTTCCCAGGGAAAACTTCTGTAGCAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
||
| CDS-3UTR CAA 90 bp | TGTACTTCTCATGATTCAAAACTAGTGACATGTGCGTTCTGGTTCTGGCCTTGCCAGCTACACTTTGTGTaGCAGTCAGCAAGGACATTA | + |
|
Preference number: 5 (lower is better) Translates to: CTSHDSKLVTCAFWFWPCQLHFV*QSARTL Trigger: TAATGTCCTTGCTGACTGCAACACAAAGTGTAGCTG...GCAAGGCCAGAACCAGAACGCACATGTCACTAGTTTTGAATCATGAGAAGTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
||
| CDS-3UTR CAA 90 bp | GAGAGTCTAACCTTGGAAGTCTTGACTAGAGTAAAGCAGAGAGAGTTAGCACTCCAGCTACACTTTGTGTaGCAGTCAGCAAGGACATTA | + |
|
Preference number: 5 (lower is better) Translates to: ESLTLEVLTRVKQRELALQLHFV*QSARTL Trigger: TAATGTCCTTGCTGACTGCAACACAAAGTGTAGCTG...GAGTGCTAACTCTCTCTGCTTTACTCTAGTCAAGACTTCCAAGGTTAGACTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165990.8 |
||
| CDS-3UTR CAA 90 bp | GAAGGCAGCTTTAATGTTAAGGGTGGGGGTTTGCTACAGAAGTTTTCCCTGGGAAATGCAGCTACAATTTaGAAACACCATGTTGGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: EGSFNVKGGGLLQKFSLGNAATI*KHHVGS Trigger: GGAACCAACATGGTGTTTCAAAATTGTAGCTGCATT...TCCCAGGGAAAACTTCTGTAGCAAACCCCCACCCTTAACATTAAAGCTGCCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
||
| CDS-3UTR CAA 90 bp | TGTACTTCTCATGATTCAAAACTAGTGACATGTGCGTTCTGGTTCTGGCCTTGCGATGTCCCCAGGGAATaGGAATTTCCTCATAAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: CTSHDSKLVTCAFWFWPCDVPRE*EFPHKD Trigger: ATCCTTATGAGGAAATTCCAATTCCCTGGGGACATC...GCAAGGCCAGAACCAGAACGCACATGTCACTAGTTTTGAATCATGAGAAGTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
||
| CDS-3UTR CAA 90 bp | GTGGTTGAACTCAGGGCCTCACATGTATTAGGCAATCACATATCCACCGAGATAAGTGGATTTTCCATATaGCTGTTCCAGATACTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: VVELRASHVLGNHISTEISGFSI*LFQILR Trigger: CCTAAGTATCTGGAACAGCAATATGGAAAATCCACT...TATCTCGGTGGATATGTGATTGCCTAATACATGTGAGGCCCTGAGTTCAACCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165990.8 |
||
| CDS-3UTR CAA 90 bp | TACAGAAGTTTTCCCTGGGAAAATCTTAAGTGCTACACCAACCTTCTGGAAATGGACTTCTGTGCACATTaGTGCACTTGCTTTCCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: YRSFPWENLKCYTNLLEMDFCAH*CTCFPS Trigger: CGAAGGAAAGCAAGTGCACAAATGTGCACAGAAGTC...CATTTCCAGAAGGTTGGTGTAGCACTTAAGATTTTCCCAGGGAAAACTTCTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
||
| CDS TCA 90 bp | GCCCAACTACAGACGTGGGGATACCGAATTGTCTCTCTATTTGAGTaGGCATGGAATTCATGTAAGTTCCTGATAGTGATTTGGATACAT | + |
|
Preference number: 5 (lower is better) Translates to: AQLQTWGYRIVSLFE*AWNSCKFLIVIWIH Trigger: ATGTATCCAAATCACTATCAGGAACTTACATGAATTCCATGCTCACTCAAATAGAGAGACAATTCGGTATCCCCACGTCTGTAGTTGGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032364.14 ENSMUST00000163678.2 ENSMUST00000165990.8 |
||
| CDS-3UTR CAA 90 bp | TGTACTTCTCATGATTCAAAACTAGTGACATGTGCGTTCTGGTTCTGGCCTTGCAGTGGATTTTCCATATaGCTGTTCCAGATACTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: CTSHDSKLVTCAFWFWPCSGFSI*LFQILR Trigger: CCTAAGTATCTGGAACAGCAATATGGAAAATCCACT...GCAAGGCCAGAACCAGAACGCACATGTCACTAGTTTTGAATCATGAGAAGTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
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| CDS-3UTR CAA 90 bp | TACAGAAGTTTTCCCTGGGAAAATCTTAAGTGCTACACCAACCTTCTGGAAATGTTAAGCAGCTACACTTaGTGTTGCAGTCAGCAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: YRSFPWENLKCYTNLLEMLSSYT*CCSQQG Trigger: TCCTTGCTGACTGCAACACAAAGTGTAGCTGCTTAA...CATTTCCAGAAGGTTGGTGTAGCACTTAAGATTTTCCCAGGGAAAACTTCTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
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| CDS-3UTR CAA 90 bp | GTTTGCTACAGAAGTTTTCCCTGGGAAAATCTTAAGTGCTACACCAACCTTCTGAATGCAGCTACAATTTaGAAACACCATGTTGGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: VCYRSFPWENLKCYTNLLNAATI*KHHVGS Trigger: GGAACCAACATGGTGTTTCAAAATTGTAGCTGCATT...CAGAAGGTTGGTGTAGCACTTAAGATTTTCCCAGGGAAAACTTCTGTAGCAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
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| CDS TCA 90 bp | CAATTAAATATCCGAGGCATATTGGAGGTAACATGTAAAGACCCATaGGGAAGACTATCTCAGCAGTGGATTTTCCATATTGCTGTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: QLNIRGILEVTCKDP*GRLSQQWIFHIAVP Trigger: TGGAACAGCAATATGGAAAATCCACTGCTGAGATAGTCTTCCTCATGGGTCTTTACATGTTACCTCCAATATGCCTCGGATATTTAATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
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| CDS-3UTR CAA 90 bp | CTTTCCATTGAACCTTCTAGCTGGTCCCTCTTGAAAGCTTTTACTCTACGGTTAGTTCCTGATAGTGATTaGGATACATATGCACATGTT | + |
|
Preference number: 5 (lower is better) Translates to: LSIEPSSWSLLKAFTLRLVPDSD*DTYAHV Trigger: AACATGTGCATATGTATCCAAATCACTATCAGGAAC...TAACCGTAGAGTAAAAGCTTTCAAGAGGGACCAGCTAGAAGGTTCAATGGAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165990.8 |
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| CDS TCA 90 bp | GTAGGTAAAATTGTTGTTTCATATTCATATCTGCCCATGAGGAAATaGGGTATCGATATTAAGAAACACCCCAGGCCCATAACTGCACAT | + |
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Preference number: 5 (lower is better) Translates to: VGKIVVSYSYLPMRK*GIDIKKHPRPITAH Trigger: ATGTGCAGTTATGGGCCTGGGGTGTTTCTTAATATCGATACCTCATTTCCTCATGGGCAGATATGAATATGAAACAACAATTTTACCTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032364.14 ENSMUST00000163678.2 ENSMUST00000165990.8 |
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| CDS-3UTR CAA 90 bp | TACAGAAGTTTTCCCTGGGAAAATCTTAAGTGCTACACCAACCTTCTGGAAATGGTTCCTGATAGTGATTaGGATACATATGCACATGTT | + |
|
Preference number: 5 (lower is better) Translates to: YRSFPWENLKCYTNLLEMVPDSD*DTYAHV Trigger: AACATGTGCATATGTATCCAAATCACTATCAGGAAC...CATTTCCAGAAGGTTGGTGTAGCACTTAAGATTTTCCCAGGGAAAACTTCTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
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| CDS-3UTR CAA 90 bp | TACAGAAGTTTTCCCTGGGAAAATCTTAAGTGCTACACCAACCTTCTGGAAATGGAATTGTCTCTCTATTaGAGTGAGCATGGAATTCAT | + |
|
Preference number: 5 (lower is better) Translates to: YRSFPWENLKCYTNLLEMELSLY*SEHGIH Trigger: ATGAATTCCATGCTCACTCAAATAGAGAGACAATTC...CATTTCCAGAAGGTTGGTGTAGCACTTAAGATTTTCCCAGGGAAAACTTCTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
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| CDS-3UTR CAA 90 bp | TACAGAAGTTTTCCCTGGGAAAATCTTAAGTGCTACACCAACCTTCTGGAAATGGAATTGATAAAGGCATaGACCTGGATCACACTTATA | + |
|
Preference number: 5 (lower is better) Translates to: YRSFPWENLKCYTNLLEMELIKA*TWITLI Trigger: TATAAGTGTGATCCAGGTCAATGCCTTTATCAATTC...CATTTCCAGAAGGTTGGTGTAGCACTTAAGATTTTCCCAGGGAAAACTTCTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
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| CDS-3UTR CAA 90 bp | CTGTGCGTAAGAGGGATATTTCTCATTCAAACAACCACAACTAGTTTTCTAATGGAATTGATAAAGGCATaGACCTGGATCACACTTATA | + |
|
Preference number: 5 (lower is better) Translates to: LCVRGIFLIQTTTTSFLMELIKA*TWITLI Trigger: TATAAGTGTGATCCAGGTCAATGCCTTTATCAATTC...CATTAGAAAACTAGTTGTGGTTGTTTGAATGAGAAATATCCCTCTTACGCACAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165990.8 |
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| CDS CCA 72 bp | ACCAAGCACCGACCCAGCGTGTATCAGTGGGAGTTATaGTCAGGTCATCTGTATTCACAGACCCAGTGTCTA | + |
|
Preference number: 6 (lower is better) Translates to: TKHRPSVYQWEL*SGHLYSQTQCL Trigger: TAGACACTGGGTCTGTGAATACAGATGACCTGACCATAACTCCCACTGATACACGCTGGGTCGGTGCTTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
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| CDS TCA 72 bp | CTCTTAGAGCAGCAGGCAACCCCAGGTAAATGCGCCTaGAGCTATTTATATCATACATCCTGCATGCCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LLEQQATPGKCA*SYLYHTSCMPL Trigger: CAGGGGCATGCAGGATGTATGATATAAATAGCTTCAGGCGCATTTACCTGGGGTTGCCTGCTGCTCTAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
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| CDS CAA 72 bp | AAAAAGTACTGCAGCTTGTTAGCACACTCAGGACCCTaGTCACACAGGCCCAGGACTGCAGATGCATTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: KKYCSLLAHSGP*SHRPRTADAFP Trigger: AGGAAATGCATCTGCAGTCCTGGGCCTGTGTGACAAGGGTCCTGAGTGTGCTAACAAGCTGCAGTACTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
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| CDS TCA 72 bp | CTTCGCAGTGAGCTTCATTTCTGCAGGATCTGTGTCTaGAGAGTCGATGTCCCCAGGGAATTGGAATTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LRSELHFCRICV*RVDVPRELEFP Trigger: AGGAAATTCCAATTCCCTGGGGACATCGACTCTTCAGACACAGATCCTGCAGAAATGAAGCTCACTGCGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
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| CDS CAA 72 bp | TTCTGCATCGTAGGACTTCTGTGCACATTTGTGCACTaGCTTTCCTTCGCAGTGAGCTTCATTTCTGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: FCIVGLLCTFVH*LSFAVSFISAG Trigger: TCCTGCAGAAATGAAGCTCACTGCGAAGGAAAGCAAGTGCACAAATGTGCACAGAAGTCCTACGATGCAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
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| CDS TCA 72 bp | TTCTGTGCACATTTGTGCACTTGCTTTCCTTCGCAGTaGGCTTCATTTCTGCAGGATCTGTGTCTGAAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: FCAHLCTCFPSQ*ASFLQDLCLKS Trigger: ACTCTTCAGACACAGATCCTGCAGAAATGAAGCTCACTGCGAAGGAAAGCAAGTGCACAAATGTGCACAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
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| CDS CCA 72 bp | GGATCTGTGTCTGAAGAGTCGATGTCCCCAGGGAATTaGAATTTCCTCATAAGGATTAGGATGAAGAGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: GSVSEESMSPGN*NFLIRIRMKSA Trigger: TGCACTCTTCATCCTAATCCTTATGAGGAAATTCCAATTCCCTGGGGACATCGACTCTTCAGACACAGATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
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| CDS CAA 72 bp | ACACTGGGTCCCATGTGTTCGTTAAGCAGCTACACTTaGTGTTGCAGTCAGCAAGGACATTATTCTCCACAT | + |
|
Preference number: 6 (lower is better) Translates to: TLGPMCSLSSYT*CCSQQGHYSPH Trigger: ATGTGGAGAATAATGTCCTTGCTGACTGCAACACAAAGTGTAGCTGCTTAACGAACACATGGGACCCAGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
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| CDS GCA 72 bp | GGTCCCATGTGTTCGTTAAGCAGCTACACTTTGTGTTaGAGTCAGCAAGGACATTATTCTCCACATATAGAG | + |
|
Preference number: 6 (lower is better) Translates to: GPMCSLSSYTLC*SQQGHYSPHIE Trigger: CTCTATATGTGGAGAATAATGTCCTTGCTGACTGCAACACAAAGTGTAGCTGCTTAACGAACACATGGGACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
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| CDS CAA 72 bp | TATGCACATGTTAATGCCAACAGAAATGCCTTGATCTaGGAAAAGCATCTGACCCCATGGGTTGCAACCTCT | + |
|
Preference number: 6 (lower is better) Translates to: YAHVNANRNALI*EKHLTPWVATS Trigger: AGAGGTTGCAACCCATGGGGTCAGATGCTTTTCCAAGATCAAGGCATTTCTGTTGGCATTAACATGTGCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032364.14 ENSMUST00000163678.2 ENSMUST00000165990.8 |
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| CDS CAA 72 bp | GGGTCCCATGTGTTCGTTAAGCAGCTACACTTTGTGTaGCAGTCAGCAAGGACATTATTCTCCACATATAGA | + |
|
Preference number: 6 (lower is better) Translates to: GSHVFVKQLHFV*QSARTLFSTYR Trigger: TCTATATGTGGAGAATAATGTCCTTGCTGACTGCAACACAAAGTGTAGCTGCTTAACGAACACATGGGACCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
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| CDS CAA 72 bp | CAGCCAATTATTGATATGATTAAAAAGTACTGCAGCTaGTTAGCACACTCAGGACCCTTGTCACACAGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: QPIIDMIKKYCS*LAHSGPLSHRP Trigger: GGGCCTGTGTGACAAGGGTCCTGAGTGTGCTAACAAGCTGCAGTACTTTTTAATCATATCAATAATTGGCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
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| CDS CAA 90 bp | AAGATGAAACAGCCAATTATTGATATGATTAAAAAGTACTGCAGCTaGTTAGCACACTCAGGACCCTTGTCACACAGGCCCAGGACTGCA | + |
|
Preference number: 6 (lower is better) Translates to: KMKQPIIDMIKKYCS*LAHSGPLSHRPRTA Trigger: TGCAGTCCTGGGCCTGTGTGACAAGGGTCCTGAGTGTGCTAACAAGCTGCAGTACTTTTTAATCATATCAATAATTGGCTGTTTCATCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
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| CDS CAA 72 bp | GATACATATGCACATGTTAATGCCAACAGAAATGCCTaGATCTTGGAAAAGCATCTGACCCCATGGGTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: DTYAHVNANRNA*ILEKHLTPWVA Trigger: TGCAACCCATGGGGTCAGATGCTTTTCCAAGATCAAGGCATTTCTGTTGGCATTAACATGTGCATATGTATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032364.14 ENSMUST00000163678.2 ENSMUST00000165990.8 |
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| CDS CAA 90 bp | TTGGATACATATGCACATGTTAATGCCAACAGAAATGCCTTGATCTaGGAAAAGCATCTGACCCCATGGGTTGCAACCTCTTTCTCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: LDTYAHVNANRNALI*EKHLTPWVATSFSD Trigger: ATCTGAGAAAGAGGTTGCAACCCATGGGGTCAGATGCTTTTCCAAGATCAAGGCATTTCTGTTGGCATTAACATGTGCATATGTATCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032364.14 ENSMUST00000163678.2 ENSMUST00000165990.8 |
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| CDS CAA 90 bp | AGTGATTTGGATACATATGCACATGTTAATGCCAACAGAAATGCCTaGATCTTGGAAAAGCATCTGACCCCATGGGTTGCAACCTCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: SDLDTYAHVNANRNA*ILEKHLTPWVATSF Trigger: GAAAGAGGTTGCAACCCATGGGGTCAGATGCTTTTCCAAGATCAAGGCATTTCTGTTGGCATTAACATGTGCATATGTATCCAAATCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032364.14 ENSMUST00000163678.2 ENSMUST00000165990.8 |
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| CDS TCA 72 bp | ATCCGAGGCATATTGGAGGTAACATGTAAAGACCCATaGGGAAGACTATCTCAGCAGTGGATTTTCCATATT | + |
|
Preference number: 6 (lower is better) Translates to: IRGILEVTCKDP*GRLSQQWIFHI Trigger: AATATGGAAAATCCACTGCTGAGATAGTCTTCCTCATGGGTCTTTACATGTTACCTCCAATATGCCTCGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
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| CDS GCA 72 bp | ATCTGTATTCACAGACCCAGTGTCTACATAAATGTTTaGACAGGAAGATCCCAACAGAAGTCCAATCAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: ICIHRPSVYINV*TGRSQQKSNQR Trigger: CCTTTGATTGGACTTCTGTTGGGATCTTCCTGTGCAAACATTTATGTAGACACTGGGTCTGTGAATACAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
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| CDS CAA 72 bp | ATAATCAACAGAAGATTTCCTATCTCAAAGCTCCCATaGATAAGCCCAACTACAGACGTGGGGATACCGAAT | + |
|
Preference number: 6 (lower is better) Translates to: IINRRFPISKLP*ISPTTDVGIPN Trigger: ATTCGGTATCCCCACGTCTGTAGTTGGGCTTATCAATGGGAGCTTTGAGATAGGAAATCTTCTGTTGATTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032364.14 ENSMUST00000163678.2 ENSMUST00000165990.8 |
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| CDS CAA 72 bp | CATCTGTATTCACAGACCCAGTGTCTACATAAATGTTaGCACAGGAAGATCCCAACAGAAGTCCAATCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: HLYSQTQCLHKC*HRKIPTEVQSK Trigger: CTTTGATTGGACTTCTGTTGGGATCTTCCTGTGCAAACATTTATGTAGACACTGGGTCTGTGAATACAGATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
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| CDS TCA 72 bp | ATTGTTGTTTCATATTCATATCTGCCCATGAGGAAATaGGGTATCGATATTAAGAAACACCCCAGGCCCATA | + |
|
Preference number: 6 (lower is better) Translates to: IVVSYSYLPMRK*GIDIKKHPRPI Trigger: TATGGGCCTGGGGTGTTTCTTAATATCGATACCTCATTTCCTCATGGGCAGATATGAATATGAAACAACAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032364.14 ENSMUST00000163678.2 ENSMUST00000165990.8 |
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| CDS GCA 72 bp | ATGAGGAAGACTATCTCAGCAGTGGATTTTCCATATTaGTGTTCCAGATACTTAGGCATGAAGGTAAATGAA | + |
|
Preference number: 6 (lower is better) Translates to: MRKTISAVDFPY*CSRYLGMKVNE Trigger: TTCATTTACCTTCATGCCTAAGTATCTGGAACAGCAATATGGAAAATCCACTGCTGAGATAGTCTTCCTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
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| CDS GCA 72 bp | ATGAAACAGCCAATTATTGATATGATTAAAAAGTACTaGAGCTTGTTAGCACACTCAGGACCCTTGTCACAC | + |
|
Preference number: 6 (lower is better) Translates to: MKQPIIDMIKKY*SLLAHSGPLSH Trigger: GTGTGACAAGGGTCCTGAGTGTGCTAACAAGCTGCAGTACTTTTTAATCATATCAATAATTGGCTGTTTCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
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| CDS CAA 90 bp | GTCTGTGTTCTGTTTTCCGTACACACAAAGCTATTTGAGGACAAGTaGCTTGTAGGTAAAATTGTTGTTTCATATTCATATCTGCCCATG | + |
|
Preference number: 6 (lower is better) Translates to: VCVLFSVHTKLFEDK*LVGKIVVSYSYLPM Trigger: CATGGGCAGATATGAATATGAAACAACAATTTTACCTACAAGCAACTTGTCCTCAAATAGCTTTGTGTGTACGGAAAACAGAACACAGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032364.14 ENSMUST00000163678.2 ENSMUST00000165990.8 |
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| CDS CAA 90 bp | TTTCCATATTGCTGTTCCAGATACTTAGGCATGAAGGTAAATGAATaGATAAAGGCATTGACCTGGATCACACTTATAAGGATGAAAATC | + |
|
Preference number: 6 (lower is better) Translates to: FPYCCSRYLGMKVNE*IKALTWITLIRMKI Trigger: GATTTTCATCCTTATAAGTGTGATCCAGGTCAATGCCTTTATCAATTCATTTACCTTCATGCCTAAGTATCTGGAACAGCAATATGGAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032364.14 ENSMUST00000165990.8 |
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