Pregenerated sensors for SLCO1A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041698Ensembl transcript IDs: ENSMUST00000042119.6, ENSMUST00000168119.8
Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCACACATCTGTGCACTCGCTTTCCTTCTCTGTGAGCTTCATCTCTaGAAGTTCAGTGTCTGGAGAGTGGATGTCGCCAGGGAAATGGAA | + |
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Preference number: 1 (lower is better) Translates to: AHICALAFLLCELHL*KFSVWRVDVAREME Trigger: TTCCATTTCCCTGGCGACATCCACTCTCCAGACACTGAACTTGCAGAGATGAAGCTCACAGAGAAGGAAAGCGAGTGCACAGATGTGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168119.8 |
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| 3UTR CCA 90 bp | CTCGCTTTCCTTCTCTGTGAGCTTCATCTCTGCAAGTTCAGTGTCTaGAGAGTGGATGTCGCCAGGGAAATGGAATTTCCTCATAAGGAT | + |
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Preference number: 1 (lower is better) Translates to: LAFLLCELHLCKFSV*RVDVAREMEFPHKD Trigger: ATCCTTATGAGGAAATTCCATTTCCCTGGCGACATCCACTCTCCAGACACTGAACTTGCAGAGATGAAGCTCACAGAGAAGGAAAGCGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168119.8 |
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| 3UTR CCA 90 bp | TCCTTCTCTGTGAGCTTCATCTCTGCAAGTTCAGTGTCTGGAGAGTaGATGTCGCCAGGGAAATGGAATTTCCTCATAAGGATTAGAATG | + |
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Preference number: 1 (lower is better) Translates to: SFSVSFISASSVSGE*MSPGKWNFLIRIRM Trigger: CATTCTAATCCTTATGAGGAAATTCCATTTCCCTGGCGACATCCACTCTCCAGACACTGAACTTGCAGAGATGAAGCTCACAGAGAAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168119.8 |
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| 3UTR TCA 90 bp | AACTGGAAGAAGGGTGAGGTTTTTAAATCTCAAAGGTCATTCCAGTaGTGTATTTCCTCCTCCAAGGATATTCCTGCCCAATCTTCCCTA | + |
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Preference number: 1 (lower is better) Translates to: NWKKGEVFKSQRSFQ*CISSSKDIPAQSSL Trigger: TAGGGAAGATTGGGCAGGAATATCCTTGGAGGAGGAAATACATCACTGGAATGACCTTTGAGATTTAAAAACCTCACCCTTCTTCCAGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168119.8 |
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| 3UTR GCA 90 bp | TCTCATGATTCAAAGAAAGTGAAGTGTACATTCCATTCATGGCCTTaGACAGGCCAGTTGAAAACTCATTACAGCTTAGTTTTCAGTTCT | + |
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Preference number: 1 (lower is better) Translates to: SHDSKKVKCTFHSWP*TGQLKTHYSLVFSS Trigger: AGAACTGAAAACTAAGCTGTAATGAGTTTTCAACTGGCCTGTGCAAGGCCATGAATGGAATGTACACTTCACTTTCTTTGAATCATGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168119.8 |
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| 3UTR CCA 90 bp | TATATCTCTCATGATTCAAAGAAAGTGAAGTGTACATTCCATTCATaGCCTTGCACAGGCCAGTTGAAAACTCATTACAGCTTAGTTTTC | + |
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Preference number: 1 (lower is better) Translates to: YISHDSKKVKCTFHS*PCTGQLKTHYSLVF Trigger: GAAAACTAAGCTGTAATGAGTTTTCAACTGGCCTGTGCAAGGCCATGAATGGAATGTACACTTCACTTTCTTTGAATCATGAGAGATATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168119.8 |
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| 3UTR TCA 90 bp | GTCCCAACCAGAATGCATATTTTCAGTTCTAAATACCTCCAACATTaGAGGATAAATTCAGTAGAATTGAATGCTGTTTCAGGAATAGGA | + |
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Preference number: 1 (lower is better) Translates to: VPTRMHIFSSKYLQH*RINSVELNAVSGIG Trigger: TCCTATTCCTGAAACAGCATTCAATTCTACTGAATTTATCCTTCAATGTTGGAGGTATTTAGAACTGAAAATATGCATTCTGGTTGGGAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
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| 3UTR-3UTR CCA 90 bp | TTAGGACTTCTGCACACATCTGTGCACTCGCTTTCCTTCTCTGTGAGCTTCATCTCAGTGTCTGGAGAGTaGATGTCGCCAGGGAAATGG | + |
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Preference number: 2 (lower is better) Translates to: LGLLHTSVHSLSFSVSFISVSGE*MSPGKW Trigger: CCATTTCCCTGGCGACATCCACTCTCCAGACACTGA...GATGAAGCTCACAGAGAAGGAAAGCGAGTGCACAGATGTGTGCAGAAGTCCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168119.8 |
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| 3UTR-3UTR TCA 90 bp | GCAGCATTATCAACAGGAAACCAAATGTCTTATTGCCTTATTGTTCTATCTGAGTGCGGGGAGAAAGCTTaGTCCTCTCACTGCTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: AALSTGNQMSYCLIVLSECGEKA*SSHCCR Trigger: CCTGCAGCAGTGAGAGGATCAAGCTTTCTCCCCGCA...CTCAGATAGAACAATAAGGCAATAAGACATTTGGTTTCCTGTTGATAATGCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168119.8 |
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| 3UTR-3UTR CCA 90 bp | GAAAGTGAAGTGTACATTCCATTCATGGCCTTGCACAGGCCAGTTGAAAACTCATGTACATTCCATTCATaGCCTTGCACAGGCCAGTTG | + |
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Preference number: 2 (lower is better) Translates to: ESEVYIPFMALHRPVENSCTFHS*PCTGQL Trigger: CAACTGGCCTGTGCAAGGCCATGAATGGAATGTACA...TGAGTTTTCAACTGGCCTGTGCAAGGCCATGAATGGAATGTACACTTCACTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
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| 3UTR-3UTR CCA 90 bp | CATGTGAAAATGAAGGAAGCTTTAAAGTTCAGTGTGTGCGTCACCGTAGATGTCTGTACATTCCATTCATaGCCTTGCACAGGCCAGTTG | + |
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Preference number: 2 (lower is better) Translates to: HVKMKEALKFSVCVTVDVCTFHS*PCTGQL Trigger: CAACTGGCCTGTGCAAGGCCATGAATGGAATGTACA...GACATCTACGGTGACGCACACACTGAACTTTAAAGCTTCCTTCATTTTCACATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
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| 3UTR-3UTR CCA 90 bp | TTAGGACTTCTGCACACATCTGTGCACTCGCTTTCCTTCTCTGTGAGCTTCATCATGTCGCCAGGGAAATaGAATTTCCTCATAAGGATT | + |
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Preference number: 2 (lower is better) Translates to: LGLLHTSVHSLSFSVSFIMSPGK*NFLIRI Trigger: AATCCTTATGAGGAAATTCCATTTCCCTGGCGACAT...GATGAAGCTCACAGAGAAGGAAAGCGAGTGCACAGATGTGTGCAGAAGTCCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168119.8 |
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| 3UTR-3UTR GCA 90 bp | CATGTGAAAATGAAGGAAGCTTTAAAGTTCAGTGTGTGCGTCACCGTAGATGTCTGTGAGCTTCATCTCTaGAAGTTCAGTGTCTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: HVKMKEALKFSVCVTVDVCELHL*KFSVWR Trigger: TCTCCAGACACTGAACTTGCAGAGATGAAGCTCACA...GACATCTACGGTGACGCACACACTGAACTTTAAAGCTTCCTTCATTTTCACATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168119.8 |
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| 3UTR CAA 90 bp | AAGAAAGTGAAGTGTACATTCCATTCATGGCCTTGCACAGGCCAGTaGAAAACTCATTACAGCTTAGTTTTCAGTTCTCCATCGTTCTCG | + |
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Preference number: 2 (lower is better) Translates to: KKVKCTFHSWPCTGQ*KTHYSLVFSSPSFS Trigger: CGAGAACGATGGAGAACTGAAAACTAAGCTGTAATGAGTTTTCAACTGGCCTGTGCAAGGCCATGAATGGAATGTACACTTCACTTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168119.8 |
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| 3UTR-3UTR GCA 90 bp | GCAGCATTATCAACAGGAAACCAAATGTCTTATTGCCTTATTGTTCTATCTGAGTTCCATTCATGGCCTTaGACAGGCCAGTTGAAAACT | + |
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Preference number: 2 (lower is better) Translates to: AALSTGNQMSYCLIVLSEFHSWP*TGQLKT Trigger: AGTTTTCAACTGGCCTGTGCAAGGCCATGAATGGAA...CTCAGATAGAACAATAAGGCAATAAGACATTTGGTTTCCTGTTGATAATGCTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168119.8 |
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| 3UTR-3UTR CCA 90 bp | TTTTGTCTATTATTGTCAGTAGTCTACTCTACCTTTTGGTTCAATGCAGGGTTGGTCTACTCTACCTTTTaGTTCAATGCAGGGTTGCAC | + |
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Preference number: 2 (lower is better) Translates to: FCLLLSVVYSTFWFNAGLVYSTF*FNAGLH Trigger: GTGCAACCCTGCATTGAACCAAAAGGTAGAGTAGAC...CAACCCTGCATTGAACCAAAAGGTAGAGTAGACTACTGACAATAATAGACAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
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| 3UTR-3UTR GCA 90 bp | AACAAAATTATCAAATGTGTGACAGGGCTAAACAAAGGAGAGACTGAAAACAGATTCCATTCATGGCCTTaGACAGGCCAGTTGAAAACT | + |
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Preference number: 2 (lower is better) Translates to: NKIIKCVTGLNKGETENRFHSWP*TGQLKT Trigger: AGTTTTCAACTGGCCTGTGCAAGGCCATGAATGGAA...TCTGTTTTCAGTCTCTCCTTTGTTTAGCCCTGTCACACATTTGATAATTTTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
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| 3UTR-3UTR TCA 90 bp | TTTTGTCTATTATTGTCAGTAGTCTACTCTACCTTTTGGTTCAATGCAGGGTTGACTGAAAACAGAAGATaGCACATGAGAAAGATGTCT | + |
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Preference number: 2 (lower is better) Translates to: FCLLLSVVYSTFWFNAGLTENRR*HMRKMS Trigger: AGACATCTTTCTCATGTGTCATCTTCTGTTTTCAGT...CAACCCTGCATTGAACCAAAAGGTAGAGTAGACTACTGACAATAATAGACAAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
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| 3UTR-3UTR TCA 90 bp | TTTTGTCTATTATTGTCAGTAGTCTACTCTACCTTTTGGTTCAATGCAGGGTTGAAACAAAGGAGAGACTaGAAACAGAAGATGACACAT | + |
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Preference number: 2 (lower is better) Translates to: FCLLLSVVYSTFWFNAGLKQRRD*KQKMTH Trigger: ATGTGTCATCTTCTGTTTTCAGTCTCTCCTTTGTTT...CAACCCTGCATTGAACCAAAAGGTAGAGTAGACTACTGACAATAATAGACAAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
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| 3UTR GCA 72 bp | TGTGCACTCGCTTTCCTTCTCTGTGAGCTTCATCTCTaGAAGTTCAGTGTCTGGAGAGTGGATGTCGCCAGG | + |
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Preference number: 3 (lower is better) Translates to: CALAFLLCELHL*KFSVWRVDVAR Trigger: CCTGGCGACATCCACTCTCCAGACACTGAACTTGCAGAGATGAAGCTCACAGAGAAGGAAAGCGAGTGCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168119.8 |
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| 3UTR TCA 72 bp | TTCTGCACACATCTGTGCACTCGCTTTCCTTCTCTGTaGGCTTCATCTCTGCAAGTTCAGTGTCTGGAGAGT | + |
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Preference number: 3 (lower is better) Translates to: FCTHLCTRFPSL*ASSLQVQCLES Trigger: ACTCTCCAGACACTGAACTTGCAGAGATGAAGCTCACAGAGAAGGAAAGCGAGTGCACAGATGTGTGCAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168119.8 |
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| 3UTR CCA 72 bp | GTGAGCTTCATCTCTGCAAGTTCAGTGTCTGGAGAGTaGATGTCGCCAGGGAAATGGAATTTCCTCATAAGG | + |
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Preference number: 3 (lower is better) Translates to: VSFISASSVSGE*MSPGKWNFLIR Trigger: CCTTATGAGGAAATTCCATTTCCCTGGCGACATCCACTCTCCAGACACTGAACTTGCAGAGATGAAGCTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168119.8 |
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| 3UTR-3UTR CAA 90 bp | TTTTGTCTATTATTGTCAGTAGTCTACTCTACCTTTTGGTTCAATGCAGGGTTGCTGCGGGGAGAAAGCTaGATCCTCTCACTGCTGCAG | + |
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Preference number: 3 (lower is better) Translates to: FCLLLSVVYSTFWFNAGLLRGES*ILSLLQ Trigger: CTGCAGCAGTGAGAGGATCAAGCTTTCTCCCCGCAG...CAACCCTGCATTGAACCAAAAGGTAGAGTAGACTACTGACAATAATAGACAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000168119.8 |
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| 3UTR GCA 72 bp | ATTCCAGTGATGTATTTCCTCCTCCAAGGATATTCCTaGCCAATCTTCCCTAAGCAGCATTATCAACAGGAA | + |
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Preference number: 3 (lower is better) Translates to: IPVMYFLLQGYS*PIFPKQHYQQE Trigger: TTCCTGTTGATAATGCTGCTTAGGGAAGATTGGGCAGGAATATCCTTGGAGGAGGAAATACATCACTGGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168119.8 |
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| 3UTR TCA 72 bp | AGGATTCCTACTATATCTCTCATGATTCAAAGAAAGTaGAGTGTACATTCCATTCATGGCCTTGCACAGGCC | + |
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Preference number: 3 (lower is better) Translates to: RIPTISLMIQRK*SVHSIHGLAQA Trigger: GGCCTGTGCAAGGCCATGAATGGAATGTACACTTCACTTTCTTTGAATCATGAGAGATATAGTAGGAATCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
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| 3UTR TCA 72 bp | AAGGGTGAGGTTTTTAAATCTCAAAGGTCATTCCAGTaGTGTATTTCCTCCTCCAAGGATATTCCTGCCCAA | + |
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Preference number: 3 (lower is better) Translates to: KGEVFKSQRSFQ*CISSSKDIPAQ Trigger: TTGGGCAGGAATATCCTTGGAGGAGGAAATACATCACTGGAATGACCTTTGAGATTTAAAAACCTCACCCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168119.8 |
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| 3UTR TCA 72 bp | TTGCTAGGGAAAATGGGTCCAACAAGCTTTGCAATGTaGTTTTTAATAACCCGACTAAGTTTGTCAGTGCTC | + |
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Preference number: 3 (lower is better) Translates to: LLGKMGPTSFAM*FLITRLSLSVL Trigger: GAGCACTGACAAACTTAGTCGGGTTATTAAAAATCACATTGCAAAGCTTGTTGGACCCATTTTCCCTAGCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
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| 3UTR GCA 72 bp | TCAAAGAAAGTGAAGTGTACATTCCATTCATGGCCTTaGACAGGCCAGTTGAAAACTCATTACAGCTTAGTT | + |
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Preference number: 3 (lower is better) Translates to: SKKVKCTFHSWP*TGQLKTHYSLV Trigger: AACTAAGCTGTAATGAGTTTTCAACTGGCCTGTGCAAGGCCATGAATGGAATGTACACTTCACTTTCTTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168119.8 |
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| 3UTR TCA 72 bp | ATAGTTGCTTTGAAGAAAGATTTTCATGAACGACTTTaGGTTGCTAGGGAAAATGGGTCCAACAAGCTTTGC | + |
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Preference number: 3 (lower is better) Translates to: IVALKKDFHERL*VARENGSNKLC Trigger: GCAAAGCTTGTTGGACCCATTTTCCCTAGCAACTCAAAGTCGTTCATGAAAATCTTTCTTCAAAGCAACTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
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| CDS-3UTR CCA 90 bp | CTGCGGGGAGAAAGCTTGATCCTCTCACTGCTGCAGGCAACCCCAGGTAAATGTAGAAAAAGGGGATGCTaGTCAGGATATTCACTCCTG | + |
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Preference number: 4 (lower is better) Translates to: LRGESLILSLLQATPGKCRKRGC*SGYSLL Trigger: CAGGAGTGAATATCCTGACCAGCATCCCCTTTTTCT...ACATTTACCTGGGGTTGCCTGCAGCAGTGAGAGGATCAAGCTTTCTCCCCGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000168119.8 |
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| CDS-3UTR GCA 90 bp | CTGCGGGGAGAAAGCTTGATCCTCTCACTGCTGCAGGCAACCCCAGGTAAATGTGATTTTCCATATTGCTaGTCCAGGTATTTGGGCAAG | + |
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Preference number: 4 (lower is better) Translates to: LRGESLILSLLQATPGKCDFPYC*SRYLGK Trigger: CTTGCCCAAATACCTGGAGCAGCAATATGGAAAATC...ACATTTACCTGGGGTTGCCTGCAGCAGTGAGAGGATCAAGCTTTCTCCCCGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000168119.8 |
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| CDS-3UTR CCA 90 bp | CTGCGGGGAGAAAGCTTGATCCTCTCACTGCTGCAGGCAACCCCAGGTAAATGTGAAACACCTTCATCTTaGAGAAGAATCTGCCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: LRGESLILSLLQATPGKCETPSS*RRICLL Trigger: AAGAAGGCAGATTCTTCTCCAAGATGAAGGTGTTTC...ACATTTACCTGGGGTTGCCTGCAGCAGTGAGAGGATCAAGCTTTCTCCCCGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168119.8 |
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| CDS-3UTR TCA 90 bp | TTAGGACTTCTGCACACATCTGTGCACTCGCTTTCCTTCTCTGTGAGCTTCATCATTTGTATCTGCCCATaGGGAAATGAGGTGATGCCA | + |
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Preference number: 4 (lower is better) Translates to: LGLLHTSVHSLSFSVSFIICICP*GNEVMP Trigger: TGGCATCACCTCATTTCCTCATGGGCAGATACAAAT...GATGAAGCTCACAGAGAAGGAAAGCGAGTGCACAGATGTGTGCAGAAGTCCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168119.8 |
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| CDS-3UTR TCA 90 bp | GAAAGTGAAGTGTACATTCCATTCATGGCCTTGCACAGGCCAGTTGAAAACTCAAGGGATGGCTGCGAGTaGGAAGATGAAACTGGAAAA | + |
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Preference number: 4 (lower is better) Translates to: ESEVYIPFMALHRPVENSRDGCE*EDETGK Trigger: TTTTCCAGTTTCATCTTCTCACTCGCAGCCATCCCT...TGAGTTTTCAACTGGCCTGTGCAAGGCCATGAATGGAATGTACACTTCACTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
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| CDS-3UTR GCA 90 bp | GAAAGTGAAGTGTACATTCCATTCATGGCCTTGCACAGGCCAGTTGAAAACTCATTCTGCACACATCTGTaGACTCGCTTTCCTTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: ESEVYIPFMALHRPVENSFCTHL*TRFPSL Trigger: CAGAGAAGGAAAGCGAGTGCACAGATGTGTGCAGAA...TGAGTTTTCAACTGGCCTGTGCAAGGCCATGAATGGAATGTACACTTCACTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042119.6 |
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| CDS-3UTR CCA 90 bp | CATGTGAAAATGAAGGAAGCTTTAAAGTTCAGTGTGTGCGTCACCGTAGATGTCCATCCTGCATGCCCCTaGTTGACCACATTTCAGAGT | + |
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Preference number: 4 (lower is better) Translates to: HVKMKEALKFSVCVTVDVHPACP*LTTFQS Trigger: ACTCTGAAATGTGGTCAACCAGGGGCATGCAGGATG...GACATCTACGGTGACGCACACACTGAACTTTAAAGCTTCCTTCATTTTCACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
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| CDS-3UTR TCA 90 bp | AACAAAATTATCAAATGTGTGACAGGGCTAAACAAAGGAGAGACTGAAAACAGATGCGGGGAGAAAGCTTaGTCCTCTCACTGCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: NKIIKCVTGLNKGETENRCGEKA*SSHCCR Trigger: CCTGCAGCAGTGAGAGGATCAAGCTTTCTCCCCGCA...TCTGTTTTCAGTCTCTCCTTTGTTTAGCCCTGTCACACATTTGATAATTTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042119.6 |
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| CDS-3UTR GCA 90 bp | TTAGGACTTCTGCACACATCTGTGCACTCGCTTTCCTTCTCTGTGAGCTTCATCTTCCTGATGACCCAATaGAGCTGCAATTTTGAAACA | + |
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Preference number: 4 (lower is better) Translates to: LGLLHTSVHSLSFSVSFIFLMTQ*SCNFET Trigger: TGTTTCAAAATTGCAGCTGCATTGGGTCATCAGGAA...GATGAAGCTCACAGAGAAGGAAAGCGAGTGCACAGATGTGTGCAGAAGTCCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168119.8 |
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| CDS-3UTR GCA 90 bp | GAAAGTGAAGTGTACATTCCATTCATGGCCTTGCACAGGCCAGTTGAAAACTCATTATATCATACATCCTaGATGCCCCTGGTTGACCAC | + |
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Preference number: 4 (lower is better) Translates to: ESEVYIPFMALHRPVENSLYHTS*MPLVDH Trigger: GTGGTCAACCAGGGGCATGCAGGATGTATGATATAA...TGAGTTTTCAACTGGCCTGTGCAAGGCCATGAATGGAATGTACACTTCACTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
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| CDS-3UTR CCA 90 bp | GAAAGTGAAGTGTACATTCCATTCATGGCCTTGCACAGGCCAGTTGAAAACTCATACCCAAGGGCATTATaGGAGTTTCACCAATTCCAC | + |
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Preference number: 4 (lower is better) Translates to: ESEVYIPFMALHRPVENSYPRAL*EFHQFH Trigger: GTGGAATTGGTGAAACTCCCATAATGCCCTTGGGTA...TGAGTTTTCAACTGGCCTGTGCAAGGCCATGAATGGAATGTACACTTCACTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
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| CDS-3UTR TCA 90 bp | TTATTTTGTCTATTATTGTCAGTAGTCTACTCTACCTTTTGGTTCAATGCAGGGCTGCATGCCCCTGGTTaGCCACATTTCAGAGTTCCC | + |
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Preference number: 4 (lower is better) Translates to: LFCLLLSVVYSTFWFNAGLHAPG*PHFRVP Trigger: GGGAACTCTGAAATGTGGTCAACCAGGGGCATGCAG...CCCTGCATTGAACCAAAAGGTAGAGTAGACTACTGACAATAATAGACAAAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
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| CDS-3UTR TCA 90 bp | AACAAAATTATCAAATGTGTGACAGGGCTAAACAAAGGAGAGACTGAAAACAGACTGCATGCCCCTGGTTaGCCACATTTCAGAGTTCCC | + |
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Preference number: 4 (lower is better) Translates to: NKIIKCVTGLNKGETENRLHAPG*PHFRVP Trigger: GGGAACTCTGAAATGTGGTCAACCAGGGGCATGCAG...TCTGTTTTCAGTCTCTCCTTTGTTTAGCCCTGTCACACATTTGATAATTTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
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| CDS-3UTR GCA 90 bp | GAAAGTGAAGTGTACATTCCATTCATGGCCTTGCACAGGCCAGTTGAAAACTCATCTTGGAGAAGAATCTaGCTTCTTGTGTTGCAACCT | + |
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Preference number: 4 (lower is better) Translates to: ESEVYIPFMALHRPVENSSWRRI*LLVLQP Trigger: AGGTTGCAACACAAGAAGGCAGATTCTTCTCCAAGA...TGAGTTTTCAACTGGCCTGTGCAAGGCCATGAATGGAATGTACACTTCACTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
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| CDS-3UTR GCA 90 bp | CATGTGAAAATGAAGGAAGCTTTAAAGTTCAGTGTGTGCGTCACCGTAGATGTCAGCTGCACCTTGTGTTaGAGTCAGCAAGGACATTTT | + |
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Preference number: 4 (lower is better) Translates to: HVKMKEALKFSVCVTVDVSCTLC*SQQGHF Trigger: AAAATGTCCTTGCTGACTGCAACACAAGGTGCAGCT...GACATCTACGGTGACGCACACACTGAACTTTAAAGCTTCCTTCATTTTCACATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
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| CDS-3UTR TCA 90 bp | CATGTGAAAATGAAGGAAGCTTTAAAGTTCAGTGTGTGCGTCACCGTAGATGTCGAGGAATACTGCCTCTaGAGTGGATTTTCCATATTG | + |
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Preference number: 4 (lower is better) Translates to: HVKMKEALKFSVCVTVDVEEYCL*SGFSIL Trigger: CAATATGGAAAATCCACTTCAGAGGCAGTATTCCTC...GACATCTACGGTGACGCACACACTGAACTTTAAAGCTTCCTTCATTTTCACATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
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| CDS-3UTR TCA 90 bp | CATGTGAAAATGAAGGAAGCTTTAAAGTTCAGTGTGTGCGTCACCGTAGATGTCATGCAGCTGCAATTTTaGAACACCATGTTGGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HVKMKEALKFSVCVTVDVMQLQF*NTMLVP Trigger: TGGAACCAACATGGTGTTTCAAAATTGCAGCTGCAT...GACATCTACGGTGACGCACACACTGAACTTTAAAGCTTCCTTCATTTTCACATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
||
| CDS-3UTR GCA 90 bp | GAAAGTGAAGTGTACATTCCATTCATGGCCTTGCACAGGCCAGTTGAAAACTCAATGACCCAATGCAGCTaGAATTTTGAAACACCATGT | + |
|
Preference number: 4 (lower is better) Translates to: ESEVYIPFMALHRPVENSMTQCS*NFETPC Trigger: ACATGGTGTTTCAAAATTGCAGCTGCATTGGGTCAT...TGAGTTTTCAACTGGCCTGTGCAAGGCCATGAATGGAATGTACACTTCACTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
||
| CDS-3UTR CCA 90 bp | GAAAGTGAAGTGTACATTCCATTCATGGCCTTGCACAGGCCAGTTGAAAACTCACTTTGGCAGTGTCTTTaGAAAGAAGAAAAAGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ESEVYIPFMALHRPVENSLWQCL*KEEKGD Trigger: ATCCCCTTTTTCTTCTTTCCAAAGACACTGCCAAAG...TGAGTTTTCAACTGGCCTGTGCAAGGCCATGAATGGAATGTACACTTCACTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
||
| CDS-3UTR CCA 90 bp | CATGTGAAAATGAAGGAAGCTTTAAAGTTCAGTGTGTGCGTCACCGTAGATGTCGCAAATCCATTTATCTaGAGCACACTCGTAAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: HVKMKEALKFSVCVTVDVANPFI*STLVRL Trigger: CAGTCTTACGAGTGTGCTCCAGATAAATGGATTTGC...GACATCTACGGTGACGCACACACTGAACTTTAAAGCTTCCTTCATTTTCACATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
||
| CDS-3UTR CCA 90 bp | TTATTTTGTCTATTATTGTCAGTAGTCTACTCTACCTTTTGGTTCAATGCAGGGTCAGTGTCTGGAGAGTaGATGTCGCCAGGGAAATGG | + |
|
Preference number: 4 (lower is better) Translates to: LFCLLLSVVYSTFWFNAGSVSGE*MSPGKW Trigger: CCATTTCCCTGGCGACATCCACTCTCCAGACACTGA...CCCTGCATTGAACCAAAAGGTAGAGTAGACTACTGACAATAATAGACAAAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042119.6 |
||
| CDS-3UTR TCA 90 bp | TATATCTCTCATGATTCAAAGAAAGTGAAGTGTACATTCCATTCATGGCCTTGCAGGGATGGCTGCGAGTaGGAAGATGAAACTGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: YISHDSKKVKCTFHSWPCRDGCE*EDETGK Trigger: TTTTCCAGTTTCATCTTCTCACTCGCAGCCATCCCT...GCAAGGCCATGAATGGAATGTACACTTCACTTTCTTTGAATCATGAGAGATATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
||
| CDS-3UTR GCA 90 bp | CATGTGAAAATGAAGGAAGCTTTAAAGTTCAGTGTGTGCGTCACCGTAGATGTCGCCAAATGCTATGTATaGAGCTTTCTTGACAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: HVKMKEALKFSVCVTVDVAKCYV*SFLDSD Trigger: ATCACTGTCAAGAAAGCTGCATACATAGCATTTGGC...GACATCTACGGTGACGCACACACTGAACTTTAAAGCTTCCTTCATTTTCACATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
||
| CDS-3UTR CCA 90 bp | GAAAGTGAAGTGTACATTCCATTCATGGCCTTGCACAGGCCAGTTGAAAACTCAGAGGCTCTTCATGAATaGCAAGAAATCTTTAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: ESEVYIPFMALHRPVENSEALHE*QEIFSD Trigger: ATCACTAAAGATTTCTTGCCATTCATGAAGAGCCTC...TGAGTTTTCAACTGGCCTGTGCAAGGCCATGAATGGAATGTACACTTCACTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
||
| CDS-3UTR TCA 90 bp | TATATCTCTCATGATTCAAAGAAAGTGAAGTGTACATTCCATTCATGGCCTTGCATTTGTATCTGCCCATaGGGAAATGAGGTGATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: YISHDSKKVKCTFHSWPCICICP*GNEVMP Trigger: TGGCATCACCTCATTTCCTCATGGGCAGATACAAAT...GCAAGGCCATGAATGGAATGTACACTTCACTTTCTTTGAATCATGAGAGATATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
||
| CDS-3UTR TCA 90 bp | AACAAAATTATCAAATGTGTGACAGGGCTAAACAAAGGAGAGACTGAAAACAGACGCTTTCCTTCTCTGTaGGCTTCATCTCTGCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: NKIIKCVTGLNKGETENRRFPSL*ASSLQV Trigger: AACTTGCAGAGATGAAGCTCACAGAGAAGGAAAGCG...TCTGTTTTCAGTCTCTCCTTTGTTTAGCCCTGTCACACATTTGATAATTTTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042119.6 |
||
| CDS-3UTR GCA 90 bp | TTTTGTCTATTATTGTCAGTAGTCTACTCTACCTTTTGGTTCAATGCAGGGTTGTGTGAGCTTCATCTCTaGAAGTTCAGTGTCTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FCLLLSVVYSTFWFNAGLCELHL*KFSVWR Trigger: TCTCCAGACACTGAACTTGCAGAGATGAAGCTCACA...CAACCCTGCATTGAACCAAAAGGTAGAGTAGACTACTGACAATAATAGACAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042119.6 |
||
| CDS-3UTR CCA 90 bp | TTTTGTCTATTATTGTCAGTAGTCTACTCTACCTTTTGGTTCAATGCAGGGTTGAGAAAAAGGGGATGCTaGTCAGGATATTCACTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FCLLLSVVYSTFWFNAGLRKRGC*SGYSLL Trigger: CAGGAGTGAATATCCTGACCAGCATCCCCTTTTTCT...CAACCCTGCATTGAACCAAAAGGTAGAGTAGACTACTGACAATAATAGACAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
||
| CDS-3UTR TCA 90 bp | AACAAAATTATCAAATGTGTGACAGGGCTAAACAAAGGAGAGACTGAAAACAGAACACAAGAAGCTGTTTaGGGACAAGTTGCTTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: NKIIKCVTGLNKGETENRTQEAV*GQVACR Trigger: CCTACAAGCAACTTGTCCTCAAACAGCTTCTTGTGT...TCTGTTTTCAGTCTCTCCTTTGTTTAGCCCTGTCACACATTTGATAATTTTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
||
| CDS-3UTR TCA 90 bp | TTTTGTCTATTATTGTCAGTAGTCTACTCTACCTTTTGGTTCAATGCAGGGTTGCTGCGAGTGAGAAGATaGAACTGGAAAATACTGACT | + |
|
Preference number: 4 (lower is better) Translates to: FCLLLSVVYSTFWFNAGLLRVRR*NWKILT Trigger: AGTCAGTATTTTCCAGTTTCATCTTCTCACTCGCAG...CAACCCTGCATTGAACCAAAAGGTAGAGTAGACTACTGACAATAATAGACAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
||
| CDS-3UTR GCA 90 bp | TATATCTCTCATGATTCAAAGAAAGTGAAGTGTACATTCCATTCATGGCCTTGCTCTTGGAGAAGAATCTaGCTTCTTGTGTTGCAACCT | + |
|
Preference number: 4 (lower is better) Translates to: YISHDSKKVKCTFHSWPCSWRRI*LLVLQP Trigger: AGGTTGCAACACAAGAAGGCAGATTCTTCTCCAAGA...GCAAGGCCATGAATGGAATGTACACTTCACTTTCTTTGAATCATGAGAGATATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
||
| CDS-3UTR GCA 90 bp | TATATCTCTCATGATTCAAAGAAAGTGAAGTGTACATTCCATTCATGGCCTTGCGATTTTCCATATTGCTaGTCCAGGTATTTGGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: YISHDSKKVKCTFHSWPCDFPYC*SRYLGK Trigger: CTTGCCCAAATACCTGGAGCAGCAATATGGAAAATC...GCAAGGCCATGAATGGAATGTACACTTCACTTTCTTTGAATCATGAGAGATATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
||
| CDS-3UTR GCA 90 bp | TTATTTTGTCTATTATTGTCAGTAGTCTACTCTACCTTTTGGTTCAATGCAGGGAGCTGCACCTTGTGTTaGAGTCAGCAAGGACATTTT | + |
|
Preference number: 4 (lower is better) Translates to: LFCLLLSVVYSTFWFNAGSCTLC*SQQGHF Trigger: AAAATGTCCTTGCTGACTGCAACACAAGGTGCAGCT...CCCTGCATTGAACCAAAAGGTAGAGTAGACTACTGACAATAATAGACAAAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
||
| CDS-3UTR GCA 90 bp | CATGTGAAAATGAAGGAAGCTTTAAAGTTCAGTGTGTGCGTCACCGTAGATGTCTTGATTAAAAAGTACTaGAGCTTGTTGTCACACTCA | + |
|
Preference number: 4 (lower is better) Translates to: HVKMKEALKFSVCVTVDVLIKKY*SLLSHS Trigger: TGAGTGTGACAACAAGCTGCAGTACTTTTTAATCAA...GACATCTACGGTGACGCACACACTGAACTTTAAAGCTTCCTTCATTTTCACATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
||
| CDS-3UTR GCA 90 bp | AACAAAATTATCAAATGTGTGACAGGGCTAAACAAAGGAGAGACTGAAAACAGATTATATCATACATCCTaGATGCCCCTGGTTGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: NKIIKCVTGLNKGETENRLYHTS*MPLVDH Trigger: GTGGTCAACCAGGGGCATGCAGGATGTATGATATAA...TCTGTTTTCAGTCTCTCCTTTGTTTAGCCCTGTCACACATTTGATAATTTTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
||
| CDS-3UTR CCA 90 bp | TTATTTTGTCTATTATTGTCAGTAGTCTACTCTACCTTTTGGTTCAATGCAGGGTACCCAAGGGCATTATaGGAGTTTCACCAATTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LFCLLLSVVYSTFWFNAGYPRAL*EFHQFH Trigger: GTGGAATTGGTGAAACTCCCATAATGCCCTTGGGTA...CCCTGCATTGAACCAAAAGGTAGAGTAGACTACTGACAATAATAGACAAAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
||
| CDS-3UTR CCA 90 bp | TATATCTCTCATGATTCAAAGAAAGTGAAGTGTACATTCCATTCATGGCCTTGCCTCCTTTATAAGAGGTaGTTAATCCAGCAACTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: YISHDSKKVKCTFHSWPCLLYKR*LIQQLG Trigger: TCCCAGTTGCTGGATTAACCACCTCTTATAAAGGAG...GCAAGGCCATGAATGGAATGTACACTTCACTTTCTTTGAATCATGAGAGATATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
||
| 3UTR CAA 72 bp | ATTTTGTCTATTATTGTCAGTAGTCTACTCTACCTTTaGGTTCAATGCAGGGTTGCACACATGCTAGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: ILSIIVSSLLYL*VQCRVAHMLGN Trigger: ATTGCCTAGCATGTGTGCAACCCTGCATTGAACCAAAAGGTAGAGTAGACTACTGACAATAATAGACAAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
||
| CDS-3UTR TCA 90 bp | TTATTTTGTCTATTATTGTCAGTAGTCTACTCTACCTTTTGGTTCAATGCAGGGAGCTATAAACACCTATaGGGAATACTGCCTCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LFCLLLSVVYSTFWFNAGSYKHL*GILPLK Trigger: CTTCAGAGGCAGTATTCCTCATAGGTGTTTATAGCT...CCCTGCATTGAACCAAAAGGTAGAGTAGACTACTGACAATAATAGACAAAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
||
| CDS-3UTR TCA 90 bp | AACAAAATTATCAAATGTGTGACAGGGCTAAACAAAGGAGAGACTGAAAACAGAATGCAGCTGCAATTTTaGAACACCATGTTGGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NKIIKCVTGLNKGETENRMQLQF*NTMLVP Trigger: TGGAACCAACATGGTGTTTCAAAATTGCAGCTGCAT...TCTGTTTTCAGTCTCTCCTTTGTTTAGCCCTGTCACACATTTGATAATTTTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
||
| CDS-3UTR TCA 90 bp | AACAAAATTATCAAATGTGTGACAGGGCTAAACAAAGGAGAGACTGAAAACAGACTGCGAGTGAGAAGATaGAACTGGAAAATACTGACT | + |
|
Preference number: 4 (lower is better) Translates to: NKIIKCVTGLNKGETENRLRVRR*NWKILT Trigger: AGTCAGTATTTTCCAGTTTCATCTTCTCACTCGCAG...TCTGTTTTCAGTCTCTCCTTTGTTTAGCCCTGTCACACATTTGATAATTTTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
||
| CDS-3UTR TCA 90 bp | GCAGCATTATCAACAGGAAACCAAATGTCTTATTGCCTTATTGTTCTATCTGAGTCTATCCCTCGGACTTaGAACTCTGAATCTGTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: AALSTGNQMSYCLIVLSESIPRT*NSESVY Trigger: ATAAACAGATTCAGAGTTTCAAGTCCGAGGGATAGA...CTCAGATAGAACAATAAGGCAATAAGACATTTGGTTTCCTGTTGATAATGCTGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168119.8 |
||
| CDS-3UTR GCA 90 bp | TTTTGTCTATTATTGTCAGTAGTCTACTCTACCTTTTGGTTCAATGCAGGGTTGTTCCTGATGACCCAATaGAGCTGCAATTTTGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: FCLLLSVVYSTFWFNAGLFLMTQ*SCNFET Trigger: TGTTTCAAAATTGCAGCTGCATTGGGTCATCAGGAA...CAACCCTGCATTGAACCAAAAGGTAGAGTAGACTACTGACAATAATAGACAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
||
| CDS-3UTR CCA 90 bp | TTTTGTCTATTATTGTCAGTAGTCTACTCTACCTTTTGGTTCAATGCAGGGTTGGAAACACCTTCATCTTaGAGAAGAATCTGCCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FCLLLSVVYSTFWFNAGLETPSS*RRICLL Trigger: AAGAAGGCAGATTCTTCTCCAAGATGAAGGTGTTTC...CAACCCTGCATTGAACCAAAAGGTAGAGTAGACTACTGACAATAATAGACAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
||
| CDS-3UTR CCA 90 bp | TTTTGTCTATTATTGTCAGTAGTCTACTCTACCTTTTGGTTCAATGCAGGGTTGTATCAGTGGGAGTTATaGTCAGGTCATCTGTATTCA | + |
|
Preference number: 4 (lower is better) Translates to: FCLLLSVVYSTFWFNAGLYQWEL*SGHLYS Trigger: TGAATACAGATGACCTGACCATAACTCCCACTGATA...CAACCCTGCATTGAACCAAAAGGTAGAGTAGACTACTGACAATAATAGACAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
||
| CDS-3UTR CCA 90 bp | TATATCTCTCATGATTCAAAGAAAGTGAAGTGTACATTCCATTCATGGCCTTGCCTTTGGCAGTGTCTTTaGAAAGAAGAAAAAGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: YISHDSKKVKCTFHSWPCLWQCL*KEEKGD Trigger: ATCCCCTTTTTCTTCTTTCCAAAGACACTGCCAAAG...GCAAGGCCATGAATGGAATGTACACTTCACTTTCTTTGAATCATGAGAGATATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
||
| CDS-3UTR CCA 90 bp | TTATTTTGTCTATTATTGTCAGTAGTCTACTCTACCTTTTGGTTCAATGCAGGGGCAAATCCATTTATCTaGAGCACACTCGTAAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: LFCLLLSVVYSTFWFNAGANPFI*STLVRL Trigger: CAGTCTTACGAGTGTGCTCCAGATAAATGGATTTGC...CCCTGCATTGAACCAAAAGGTAGAGTAGACTACTGACAATAATAGACAAAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
||
| CDS-3UTR CCA 90 bp | TTTTGTCTATTATTGTCAGTAGTCTACTCTACCTTTTGGTTCAATGCAGGGTTGTTTGAAACACCATGTTaGTTCCAGTTCCAACAGACT | + |
|
Preference number: 4 (lower is better) Translates to: FCLLLSVVYSTFWFNAGLFETPC*FQFQQT Trigger: AGTCTGTTGGAACTGGAACCAACATGGTGTTTCAAA...CAACCCTGCATTGAACCAAAAGGTAGAGTAGACTACTGACAATAATAGACAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
||
| CDS-3UTR CCA 90 bp | TATATCTCTCATGATTCAAAGAAAGTGAAGTGTACATTCCATTCATGGCCTTGCATGTCGCCAGGGAAATaGAATTTCCTCATAAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: YISHDSKKVKCTFHSWPCMSPGK*NFLIRI Trigger: AATCCTTATGAGGAAATTCCATTTCCCTGGCGACAT...GCAAGGCCATGAATGGAATGTACACTTCACTTTCTTTGAATCATGAGAGATATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042119.6 |
||
| CDS-3UTR TCA 90 bp | TTTTGTCTATTATTGTCAGTAGTCTACTCTACCTTTTGGTTCAATGCAGGGTTGCCAGGTAAATGTGCCTaGATCTGTTTATATCATACA | + |
|
Preference number: 4 (lower is better) Translates to: FCLLLSVVYSTFWFNAGLPGKCA*ICLYHT Trigger: TGTATGATATAAACAGATTCAGGCACATTTACCTGG...CAACCCTGCATTGAACCAAAAGGTAGAGTAGACTACTGACAATAATAGACAAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042119.6 |
||
| CDS-3UTR GCA 90 bp | AACAAAATTATCAAATGTGTGACAGGGCTAAACAAAGGAGAGACTGAAAACAGAATGACCCAATGCAGCTaGAATTTTGAAACACCATGT | + |
|
Preference number: 4 (lower is better) Translates to: NKIIKCVTGLNKGETENRMTQCS*NFETPC Trigger: ACATGGTGTTTCAAAATTGCAGCTGCATTGGGTCAT...TCTGTTTTCAGTCTCTCCTTTGTTTAGCCCTGTCACACATTTGATAATTTTGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
||
| CDS-3UTR CCA 90 bp | AACAAAATTATCAAATGTGTGACAGGGCTAAACAAAGGAGAGACTGAAAACAGATATCAGTGGGAGTTATaGTCAGGTCATCTGTATTCA | + |
|
Preference number: 4 (lower is better) Translates to: NKIIKCVTGLNKGETENRYQWEL*SGHLYS Trigger: TGAATACAGATGACCTGACCATAACTCCCACTGATA...TCTGTTTTCAGTCTCTCCTTTGTTTAGCCCTGTCACACATTTGATAATTTTGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
||
| CDS-3UTR CCA 90 bp | TTATTTTGTCTATTATTGTCAGTAGTCTACTCTACCTTTTGGTTCAATGCAGGGTTTGAAACACCATGTTaGTTCCAGTTCCAACAGACT | + |
|
Preference number: 4 (lower is better) Translates to: LFCLLLSVVYSTFWFNAGFETPC*FQFQQT Trigger: AGTCTGTTGGAACTGGAACCAACATGGTGTTTCAAA...CCCTGCATTGAACCAAAAGGTAGAGTAGACTACTGACAATAATAGACAAAATAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
||
| CDS-3UTR CCA 90 bp | AACAAAATTATCAAATGTGTGACAGGGCTAAACAAAGGAGAGACTGAAAACAGAGAGAGTTTTCTGATTTaGCAAAGTCTTCGATGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: NKIIKCVTGLNKGETENRESFLI*QSLRCK Trigger: CTTACATCGAAGACTTTGCCAAATCAGAAAACTCTC...TCTGTTTTCAGTCTCTCCTTTGTTTAGCCCTGTCACACATTTGATAATTTTGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
||
| CDS-3UTR CCA 90 bp | TTATTTTGTCTATTATTGTCAGTAGTCTACTCTACCTTTTGGTTCAATGCAGGGGAGGCTCTTCATGAATaGCAAGAAATCTTTAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LFCLLLSVVYSTFWFNAGEALHE*QEIFSD Trigger: ATCACTAAAGATTTCTTGCCATTCATGAAGAGCCTC...CCCTGCATTGAACCAAAAGGTAGAGTAGACTACTGACAATAATAGACAAAATAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
||
| CDS CCA 90 bp | AGTTTCCTGATGACCCAATGCAGCTGCAATTTTGAAACACCATGTTaGTTCCAGTTCCAACAGACTTCTCACAGCCTGCGAGGCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SFLMTQCSCNFETPC*FQFQQTSHSLRGRL Trigger: CAGCCTGCCTCGCAGGCTGTGAGAAGTCTGTTGGAACTGGAACCAACATGGTGTTTCAAAATTGCAGCTGCATTGGGTCATCAGGAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
||
| CDS-3UTR CAA 90 bp | GAAAGTGAAGTGTACATTCCATTCATGGCCTTGCACAGGCCAGTTGAAAACTCACTGCGGGGAGAAAGCTaGATCCTCTCACTGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: ESEVYIPFMALHRPVENSLRGES*ILSLLQ Trigger: CTGCAGCAGTGAGAGGATCAAGCTTTCTCCCCGCAG...TGAGTTTTCAACTGGCCTGTGCAAGGCCATGAATGGAATGTACACTTCACTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042119.6 |
||
| CDS CCA 90 bp | AGCCAATCCACCAAGCACCGACCCAGCGTGTATCAGTGGGAGTTATaGTCAGGTCATCTGTATTCACAGACCCAATGTCTACATAAACAC | + |
|
Preference number: 5 (lower is better) Translates to: SQSTKHRPSVYQWEL*SGHLYSQTQCLHKH Trigger: GTGTTTATGTAGACATTGGGTCTGTGAATACAGATGACCTGACCATAACTCCCACTGATACACGCTGGGTCGGTGCTTGGTGGATTGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
||
| CDS GCA 90 bp | ACAGCCCCAGGACTGCAGATGAGTTTCCTGATGACCCAATGCAGCTaGAATTTTGAAACACCATGTTGGTTCCAGTTCCAACAGACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: TAPGLQMSFLMTQCS*NFETPCWFQFQQTS Trigger: AGAAGTCTGTTGGAACTGGAACCAACATGGTGTTTCAAAATTGCAGCTGCATTGGGTCATCAGGAAACTCATCTGCAGTCCTGGGGCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
||
| CDS GCA 90 bp | TCTTACACAGCCCCAGGACTGCAGATGAGTTTCCTGATGACCCAATaGAGCTGCAATTTTGAAACACCATGTTGGTTCCAGTTCCAACAG | + |
|
Preference number: 5 (lower is better) Translates to: SYTAPGLQMSFLMTQ*SCNFETPCWFQFQQ Trigger: CTGTTGGAACTGGAACCAACATGGTGTTTCAAAATTGCAGCTGCATTGGGTCATCAGGAAACTCATCTGCAGTCCTGGGGCTGTGTAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
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| CDS TCA 90 bp | AGGACTGCAGATGAGTTTCCTGATGACCCAATGCAGCTGCAATTTTaGAACACCATGTTGGTTCCAGTTCCAACAGACTTCTCACAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: RTADEFPDDPMQLQF*NTMLVPVPTDFSQP Trigger: AGGCTGTGAGAAGTCTGTTGGAACTGGAACCAACATGGTGTTTCAAAATTGCAGCTGCATTGGGTCATCAGGAAACTCATCTGCAGTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
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| CDS TCA 90 bp | GCATACTGGAGGCAAGCTATAAACACCTATGAGGAATACTGCCTCTaGAGTGGATTTTCCATATTGCTGCTCCAGGTATTTGGGCAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: AYWRQAINTYEEYCL*SGFSILLLQVFGQE Trigger: TTCTTGCCCAAATACCTGGAGCAGCAATATGGAAAATCCACTTCAGAGGCAGTATTCCTCATAGGTGTTTATAGCTTGCCTCCAGTATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
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| CDS-3UTR CAA 90 bp | GAAAGTGAAGTGTACATTCCATTCATGGCCTTGCACAGGCCAGTTGAAAACTCAAGTGGATTTTCCATATaGCTGCTCCAGGTATTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: ESEVYIPFMALHRPVENSSGFSI*LLQVFG Trigger: CCCAAATACCTGGAGCAGCAATATGGAAAATCCACT...TGAGTTTTCAACTGGCCTGTGCAAGGCCATGAATGGAATGTACACTTCACTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
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| CDS-3UTR CAA 90 bp | GAAAGTGAAGTGTACATTCCATTCATGGCCTTGCACAGGCCAGTTGAAAACTCAGACTTCTCTTCAGATTaGACACACCTCAGAAGAACC | + |
|
Preference number: 5 (lower is better) Translates to: ESEVYIPFMALHRPVENSDFSSD*THLRRT Trigger: GGTTCTTCTGAGGTGTGTCAAATCTGAAGAGAAGTC...TGAGTTTTCAACTGGCCTGTGCAAGGCCATGAATGGAATGTACACTTCACTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
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| CDS-3UTR CAA 90 bp | TATATCTCTCATGATTCAAAGAAAGTGAAGTGTACATTCCATTCATGGCCTTGCCCTGCATGCCCCTGGTaGACCACATTTCAGAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: YISHDSKKVKCTFHSWPCPACPW*TTFQSS Trigger: GGAACTCTGAAATGTGGTCAACCAGGGGCATGCAGG...GCAAGGCCATGAATGGAATGTACACTTCACTTTCTTTGAATCATGAGAGATATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
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| CDS-3UTR CAA 90 bp | TTTTGTCTATTATTGTCAGTAGTCTACTCTACCTTTTGGTTCAATGCAGGGTTGCCTGCATGCCCCTGGTaGACCACATTTCAGAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: FCLLLSVVYSTFWFNAGLPACPW*TTFQSS Trigger: GGAACTCTGAAATGTGGTCAACCAGGGGCATGCAGG...CAACCCTGCATTGAACCAAAAGGTAGAGTAGACTACTGACAATAATAGACAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
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| CDS TCA 90 bp | GTAGGTGATATTGTTGTTTCATATTTGTATCTGCCCATGAGGAAATaGGGTGATGCCATTAAGAAACACCCCAGGCCCATAACCACACAT | + |
|
Preference number: 5 (lower is better) Translates to: VGDIVVSYLYLPMRK*GDAIKKHPRPITTH Trigger: ATGTGTGGTTATGGGCCTGGGGTGTTTCTTAATGGCATCACCTCATTTCCTCATGGGCAGATACAAATATGAAACAACAATATCACCTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
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| CDS GCA 90 bp | GGTCAGGTCATCTGTATTCACAGACCCAATGTCTACATAAACACGTaGAAAGAAAGATCCCAACAAAAGTCCAATAATCGGGCCAACAAT | + |
|
Preference number: 5 (lower is better) Translates to: GQVICIHRPNVYINT*KERSQQKSNNRANN Trigger: ATTGTTGGCCCGATTATTGGACTTTTGTTGGGATCTTTCTTTGCACGTGTTTATGTAGACATTGGGTCTGTGAATACAGATGACCTGACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
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| CDS-3UTR CAA 90 bp | CATGTGAAAATGAAGGAAGCTTTAAAGTTCAGTGTGTGCGTCACCGTAGATGTCCCTGTAGTTCTTTCTTaGGCAGTGTCTTTGGAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: HVKMKEALKFSVCVTVDVPVVLS*AVSLER Trigger: TCTTTCCAAAGACACTGCCAAAGAAAGAACTACAGG...GACATCTACGGTGACGCACACACTGAACTTTAAAGCTTCCTTCATTTTCACATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
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| CDS-3UTR CAA 90 bp | TTTTGTCTATTATTGTCAGTAGTCTACTCTACCTTTTGGTTCAATGCAGGGTTGCAGCTGCACCTTGTGTaGCAGTCAGCAAGGACATTT | + |
|
Preference number: 5 (lower is better) Translates to: FCLLLSVVYSTFWFNAGLQLHLV*QSARTF Trigger: AAATGTCCTTGCTGACTGCAACACAAGGTGCAGCTG...CAACCCTGCATTGAACCAAAAGGTAGAGTAGACTACTGACAATAATAGACAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
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| CDS-3UTR CAA 90 bp | CATGTGAAAATGAAGGAAGCTTTAAAGTTCAGTGTGTGCGTCACCGTAGATGTCAATGCAGCTGCAATTTaGAAACACCATGTTGGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: HVKMKEALKFSVCVTVDVNAAAI*KHHVGS Trigger: GGAACCAACATGGTGTTTCAAAATTGCAGCTGCATT...GACATCTACGGTGACGCACACACTGAACTTTAAAGCTTCCTTCATTTTCACATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
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| CDS-3UTR CAA 90 bp | CATGTGAAAATGAAGGAAGCTTTAAAGTTCAGTGTGTGCGTCACCGTAGATGTCTGTAGGGATACCAAATaGTCTCTCTATTTGTGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: HVKMKEALKFSVCVTVDVCRDTK*SLYLCE Trigger: CTCACACAAATAGAGAGACAATTTGGTATCCCTACA...GACATCTACGGTGACGCACACACTGAACTTTAAAGCTTCCTTCATTTTCACATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
||
| CDS-3UTR CAA 90 bp | GAAAGTGAAGTGTACATTCCATTCATGGCCTTGCACAGGCCAGTTGAAAACTCACTGGAAAATACTGACTaGATTAAAAAGTACTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ESEVYIPFMALHRPVENSLENTD*IKKYCS Trigger: GCTGCAGTACTTTTTAATCAAGTCAGTATTTTCCAG...TGAGTTTTCAACTGGCCTGTGCAAGGCCATGAATGGAATGTACACTTCACTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
||
| CDS-3UTR CAA 90 bp | GCAGCATTATCAACAGGAAACCAAATGTCTTATTGCCTTATTGTTCTATCTGAGGACTTCTCTTCAGATTaGACACACCTCAGAAGAACC | + |
|
Preference number: 5 (lower is better) Translates to: AALSTGNQMSYCLIVLSEDFSSD*THLRRT Trigger: GGTTCTTCTGAGGTGTGTCAAATCTGAAGAGAAGTC...CTCAGATAGAACAATAAGGCAATAAGACATTTGGTTTCCTGTTGATAATGCTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168119.8 |
||
| CDS-3UTR CAA 90 bp | GCAGCATTATCAACAGGAAACCAAATGTCTTATTGCCTTATTGTTCTATCTGAGAGAAACACCTTCATCTaGGAGAAGAATCTGCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: AALSTGNQMSYCLIVLSERNTFI*EKNLPS Trigger: AGAAGGCAGATTCTTCTCCAAGATGAAGGTGTTTCT...CTCAGATAGAACAATAAGGCAATAAGACATTTGGTTTCCTGTTGATAATGCTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168119.8 |
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| CDS-3UTR CAA 90 bp | GCAGCATTATCAACAGGAAACCAAATGTCTTATTGCCTTATTGTTCTATCTGAGAATGCAGCTGCAATTTaGAAACACCATGTTGGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: AALSTGNQMSYCLIVLSENAAAI*KHHVGS Trigger: GGAACCAACATGGTGTTTCAAAATTGCAGCTGCATT...CTCAGATAGAACAATAAGGCAATAAGACATTTGGTTTCCTGTTGATAATGCTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168119.8 |
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| CDS-3UTR CAA 90 bp | TATATCTCTCATGATTCAAAGAAAGTGAAGTGTACATTCCATTCATGGCCTTGCATCTGCCTTCTTGTGTaGCAACCTTTTTCTCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: YISHDSKKVKCTFHSWPCICLLV*QPFSLF Trigger: AAACAGAGAAAAAGGTTGCAACACAAGAAGGCAGAT...GCAAGGCCATGAATGGAATGTACACTTCACTTTCTTTGAATCATGAGAGATATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
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| CDS-3UTR CAA 90 bp | TTATTTTGTCTATTATTGTCAGTAGTCTACTCTACCTTTTGGTTCAATGCAGGGAGAAACACCTTCATCTaGGAGAAGAATCTGCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LFCLLLSVVYSTFWFNAGRNTFI*EKNLPS Trigger: AGAAGGCAGATTCTTCTCCAAGATGAAGGTGTTTCT...CCCTGCATTGAACCAAAAGGTAGAGTAGACTACTGACAATAATAGACAAAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
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| CDS-3UTR CAA 90 bp | TTATTTTGTCTATTATTGTCAGTAGTCTACTCTACCTTTTGGTTCAATGCAGGGCCTGTAGTTCTTTCTTaGGCAGTGTCTTTGGAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: LFCLLLSVVYSTFWFNAGPVVLS*AVSLER Trigger: TCTTTCCAAAGACACTGCCAAAGAAAGAACTACAGG...CCCTGCATTGAACCAAAAGGTAGAGTAGACTACTGACAATAATAGACAAAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
||
| CDS-3UTR CAA 90 bp | TTATTTTGTCTATTATTGTCAGTAGTCTACTCTACCTTTTGGTTCAATGCAGGGTGTAGGGATACCAAATaGTCTCTCTATTTGTGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LFCLLLSVVYSTFWFNAGCRDTK*SLYLCE Trigger: CTCACACAAATAGAGAGACAATTTGGTATCCCTACA...CCCTGCATTGAACCAAAAGGTAGAGTAGACTACTGACAATAATAGACAAAATAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
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| CDS-3UTR CAA 90 bp | AACAAAATTATCAAATGTGTGACAGGGCTAAACAAAGGAGAGACTGAAAACAGACTGGAAAATACTGACTaGATTAAAAAGTACTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: NKIIKCVTGLNKGETENRLENTD*IKKYCS Trigger: GCTGCAGTACTTTTTAATCAAGTCAGTATTTTCCAG...TCTGTTTTCAGTCTCTCCTTTGTTTAGCCCTGTCACACATTTGATAATTTTGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
||
| CDS TCA 72 bp | CTCTCACTGCTGCAGGCAACCCCAGGTAAATGTGCCTaGATCTGTTTATATCATACATCCTGCATGCCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LSLLQATPGKCA*ICLYHTSCMPL Trigger: CAGGGGCATGCAGGATGTATGATATAAACAGATTCAGGCACATTTACCTGGGGTTGCCTGCAGCAGTGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042119.6 |
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| CDS GCA 72 bp | GCCCCAGGACTGCAGATGAGTTTCCTGATGACCCAATaGAGCTGCAATTTTGAAACACCATGTTGGTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: APGLQMSFLMTQ*SCNFETPCWFQ Trigger: CTGGAACCAACATGGTGTTTCAAAATTGCAGCTGCATTGGGTCATCAGGAAACTCATCTGCAGTCCTGGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
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| CDS CCA 72 bp | ACCAAGCACCGACCCAGCGTGTATCAGTGGGAGTTATaGTCAGGTCATCTGTATTCACAGACCCAATGTCTA | + |
|
Preference number: 6 (lower is better) Translates to: TKHRPSVYQWEL*SGHLYSQTQCL Trigger: TAGACATTGGGTCTGTGAATACAGATGACCTGACCATAACTCCCACTGATACACGCTGGGTCGGTGCTTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
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| CDS CAA 72 bp | ACACTGGATCCCATGTGTCCGTTAAGCAGCTGCACCTaGTGTTGCAGTCAGCAAGGACATTTTTCTCCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: TLDPMCPLSSCT*CCSQQGHFSPH Trigger: ATGGGGAGAAAAATGTCCTTGCTGACTGCAACACAAGGTGCAGCTGCTTAACGGACACATGGGATCCAGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
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| CDS CCA 72 bp | ATGACCCAATGCAGCTGCAATTTTGAAACACCATGTTaGTTCCAGTTCCAACAGACTTCTCACAGCCTGCGA | + |
|
Preference number: 6 (lower is better) Translates to: MTQCSCNFETPC*FQFQQTSHSLR Trigger: TCGCAGGCTGTGAGAAGTCTGTTGGAACTGGAACCAACATGGTGTTTCAAAATTGCAGCTGCATTGGGTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
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| CDS GCA 72 bp | GGACTGCAGATGAGTTTCCTGATGACCCAATGCAGCTaGAATTTTGAAACACCATGTTGGTTCCAGTTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: GLQMSFLMTQCS*NFETPCWFQFQ Trigger: TTGGAACTGGAACCAACATGGTGTTTCAAAATTGCAGCTGCATTGGGTCATCAGGAAACTCATCTGCAGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
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| CDS TCA 72 bp | GATGAGTTTCCTGATGACCCAATGCAGCTGCAATTTTaGAACACCATGTTGGTTCCAGTTCCAACAGACTTC | + |
|
Preference number: 6 (lower is better) Translates to: DEFPDDPMQLQF*NTMLVPVPTDF Trigger: GAAGTCTGTTGGAACTGGAACCAACATGGTGTTTCAAAATTGCAGCTGCATTGGGTCATCAGGAAACTCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
||
| CDS GCA 72 bp | AATGTGCCTGAATCTGTTTATATCATACATCCTGCATaGCCCTGGTTGACCACATTTCAGAGTTCCCCAATG | + |
|
Preference number: 6 (lower is better) Translates to: NVPESVYIIHPA*PWLTTFQSSPM Trigger: CATTGGGGAACTCTGAAATGTGGTCAACCAGGGGCATGCAGGATGTATGATATAAACAGATTCAGGCACATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042119.6 |
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| CDS CCA 72 bp | CCCCATATAGAGGGTGCTGAACTCCTTTATAAGAGGTaGTTAATCCAGCAACTGGGAAATTATCACAGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: PHIEGAELLYKR*LIQQLGNYHRS Trigger: TGACCTGTGATAATTTCCCAGTTGCTGGATTAACCACCTCTTATAAAGGAGTTCAGCACCCTCTATATGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
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| CDS CAA 72 bp | CTGGAAAATACTGACTTGATTAAAAAGTACTGCAGCTaGTTGTCACACTCAGGGCCTTTCTTACACAGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: LENTDLIKKYCS*LSHSGPFLHSP Trigger: GGGGCTGTGTAAGAAAGGCCCTGAGTGTGACAACAAGCTGCAGTACTTTTTAATCAAGTCAGTATTTTCCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
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| CDS CAA 90 bp | AATACTGCCTCTGAAGTGGATTTTCCATATTGCTGCTCCAGGTATTaGGGCAAGAAGGTAAATGTACTGGCAAATCCATTTATCTGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: NTASEVDFPYCCSRY*GKKVNVLANPFIWS Trigger: GCTCCAGATAAATGGATTTGCCAGTACATTTACCTTCTTGCCCAAATACCTGGAGCAGCAATATGGAAAATCCACTTCAGAGGCAGTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
||
| CDS TCA 72 bp | ATCCAAGGCATACTGGAGGCAAGCTATAAACACCTATaGGGAATACTGCCTCTGAAGTGGATTTTCCATATT | + |
|
Preference number: 6 (lower is better) Translates to: IQGILEASYKHL*GILPLKWIFHI Trigger: AATATGGAAAATCCACTTCAGAGGCAGTATTCCTCATAGGTGTTTATAGCTTGCCTCCAGTATGCCTTGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
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| CDS GCA 72 bp | ATGAGGAATACTGCCTCTGAAGTGGATTTTCCATATTaGTGCTCCAGGTATTTGGGCAAGAAGGTAAATGTA | + |
|
Preference number: 6 (lower is better) Translates to: MRNTASEVDFPY*CSRYLGKKVNV Trigger: TACATTTACCTTCTTGCCCAAATACCTGGAGCAGCAATATGGAAAATCCACTTCAGAGGCAGTATTCCTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
||
| CDS CAA 90 bp | TTGGCTAGGTATGCACATGTTAATGACATCAGAAACACCTTCATCTaGGAGAAGAATCTGCCTTCTTGTGTTGCAACCTTTTTCTCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: LARYAHVNDIRNTFI*EKNLPSCVATFFSV Trigger: AACAGAGAAAAAGGTTGCAACACAAGAAGGCAGATTCTTCTCCAAGATGAAGGTGTTTCTGATGTCATTAACATGTGCATACCTAGCCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
||
| CDS TCA 72 bp | AAAGTTCTTCTTTTCTATCCCTCGGACTTGAAACTCTaGATCTGTTTATATCATACATCCTGCATGCCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: KVLLFYPSDLKL*ICLYHTSCMPL Trigger: CAGGGGCATGCAGGATGTATGATATAAACAGATTCAGAGTTTCAAGTCCGAGGGATAGAAAAGAAGAACTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168119.8 |
||
| CDS CAA 72 bp | TCTGAAGTGGATTTTCCATATTGCTGCTCCAGGTATTaGGGCAAGAAGGTAAATGTACTGGCAAATCCATTT | + |
|
Preference number: 6 (lower is better) Translates to: SEVDFPYCCSRY*GKKVNVLANPF Trigger: AAATGGATTTGCCAGTACATTTACCTTCTTGCCCAAATACCTGGAGCAGCAATATGGAAAATCCACTTCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
||
| CDS TCA 72 bp | AGTAAACAGGTGCCGGAATGCCAGCTAATAGTCTTATaGAAAATGCATGTAATCCAACTCCAATTGACTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SKQVPECQLIVL*KMHVIQLQLTS Trigger: AGAAGTCAATTGGAGTTGGATTACATGCATTTTTCATAAGACTATTAGCTGGCATTCCGGCACCTGTTTACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
||
| CDS CAA 90 bp | GTCTGTGTTCTGTTTTCTATACACAAGAAGCTGTTTGAGGACAAGTaGCTTGTAGGTGATATTGTTGTTTCATATTTGTATCTGCCCATG | + |
|
Preference number: 6 (lower is better) Translates to: VCVLFSIHKKLFEDK*LVGDIVVSYLYLPM Trigger: CATGGGCAGATACAAATATGAAACAACAATATCACCTACAAGCAACTTGTCCTCAAACAGCTTCTTGTGTATAGAAAACAGAACACAGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
||
| CDS CAA 72 bp | GATAAGGACAGGCCAAATGCTATGTATGCAGCTTTCTaGACAGTGATCTTAAACTTCTTCATAATAAAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: DKDRPNAMYAAF*TVILNFFIIKP Trigger: TGGCTTTATTATGAAGAAGTTTAAGATCACTGTCAAGAAAGCTGCATACATAGCATTTGGCCTGTCCTTATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
||
| CDS CAA 72 bp | AGTGATAAATCCAACTACAGATGTAGGGATACCAAATaGTCTCTCTATTTGTGTGAGCATGGAATTCATATA | + |
|
Preference number: 6 (lower is better) Translates to: SDKSNYRCRDTK*SLYLCEHGIHI Trigger: TATATGAATTCCATGCTCACACAAATAGAGAGACAATTTGGTATCCCTACATCTGTAGTTGGATTTATCACT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042119.6 ENSMUST00000168119.8 |
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