Pregenerated sensors for SLC9C1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033210Ensembl transcript IDs: ENSMUST00000159945.8, ENSMUST00000162151.3, ENSMUST00000162774.7
Found 176 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCTCCCTTCTTCTCACCAAAGCTTCCAGCTGCGCCTACCAACACCTaGACTGCACTCTGGGACAGAACCTCATTCCTGTACTGTCGTTGG | + |
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Preference number: 1 (lower is better) Translates to: SPFFSPKLPAAPTNT*TALWDRTSFLYCRW Trigger: CCAACGACAGTACAGGAATGAGGTTCTGTCCCAGAGTGCAGTGCAGGTGTTGGTAGGCGCAGCTGGAAGCTTTGGTGAGAAGAAGGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162774.7 |
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| 3UTR GCA 90 bp | CTTCTTCTCACCAAAGCTTCCAGCTGCGCCTACCAACACCTGCACTaGACTCTGGGACAGAACCTCATTCCTGTACTGTCGTTGGTAGCT | + |
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Preference number: 1 (lower is better) Translates to: LLLTKASSCAYQHLH*TLGQNLIPVLSLVA Trigger: AGCTACCAACGACAGTACAGGAATGAGGTTCTGTCCCAGAGTGCAGTGCAGGTGTTGGTAGGCGCAGCTGGAAGCTTTGGTGAGAAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162774.7 |
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| 3UTR TCA 90 bp | CAGAACCTCATTCCTGTACTGTCGTTGGTAGCTCGCTATCTGTGCTaGCAGGAGACGTCTGTTGGTCAGCTCCATGGCTTCAATGTTGAG | + |
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Preference number: 1 (lower is better) Translates to: QNLIPVLSLVARYLC*QETSVGQLHGFNVE Trigger: CTCAACATTGAAGCCATGGAGCTGACCAACAGACGTCTCCTGTCAGCACAGATAGCGAGCTACCAACGACAGTACAGGAATGAGGTTCTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162774.7 |
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| 3UTR GCA 90 bp | CTCAGGACTCATATATTCTCCCTTCTTCTCACCAAAGCTTCCAGCTaGGCCTACCAACACCTGCACTGCACTCTGGGACAGAACCTCATT | + |
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Preference number: 1 (lower is better) Translates to: LRTHIFSLLLTKASS*AYQHLHCTLGQNLI Trigger: AATGAGGTTCTGTCCCAGAGTGCAGTGCAGGTGTTGGTAGGCGCAGCTGGAAGCTTTGGTGAGAAGAAGGGAGAATATATGAGTCCTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162774.7 |
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| 3UTR TCA 90 bp | GTGCTGACAGGAGACGTCTGTTGGTCAGCTCCATGGCTTCAATGTTaGGGGTCTCATCTATTTCCTTGTTGCAATCTGGACATTTCACCT | + |
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Preference number: 1 (lower is better) Translates to: VLTGDVCWSAPWLQC*GSHLFPCCNLDISP Trigger: AGGTGAAATGTCCAGATTGCAACAAGGAAATAGATGAGACCCTCAACATTGAAGCCATGGAGCTGACCAACAGACGTCTCCTGTCAGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162774.7 |
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| 3UTR CCA 90 bp | CTAAGCCATGGGATATTGCACGGGGCTTCTTCAACATTAAATGGCTaGATAACAGACTGCAGATCAAGCACCTGGATCTTTTTGGCCATG | + |
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Preference number: 1 (lower is better) Translates to: LSHGILHGASSTLNG*ITDCRSSTWIFLAM Trigger: CATGGCCAAAAAGATCCAGGTGCTTGATCTGCAGTCTGTTATCCAGCCATTTAATGTTGAAGAAGCCCCGTGCAATATCCCATGGCTTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
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| 3UTR CCA 90 bp | TTCACTAAGCCATGGGATATTGCACGGGGCTTCTTCAACATTAAATaGCTGGATAACAGACTGCAGATCAAGCACCTGGATCTTTTTGGC | + |
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Preference number: 1 (lower is better) Translates to: FTKPWDIARGFFNIK*LDNRLQIKHLDLFG Trigger: GCCAAAAAGATCCAGGTGCTTGATCTGCAGTCTGTTATCCAGCCATTTAATGTTGAAGAAGCCCCGTGCAATATCCCATGGCTTAGTGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
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| 3UTR GCA 90 bp | GAATACCGAAATGATATCTGCTGGCTCATCCTTTTGTCTATGATTTaGAGCAGTTTTGGTGTTACAAGCTTCAAGATGCGCAGTATACGA | + |
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Preference number: 1 (lower is better) Translates to: EYRNDICWLILLSMI*SSFGVTSFKMRSIR Trigger: TCGTATACTGCGCATCTTGAAGCTTGTAACACCAAAACTGCTGCAAATCATAGACAAAAGGATGAGCCAGCAGATATCATTTCGGTATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
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| 3UTR GCA 90 bp | ATATTGCACGGGGCTTCTTCAACATTAAATGGCTGGATAACAGACTaGAGATCAAGCACCTGGATCTTTTTGGCCATGATTAACTTGTTA | + |
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Preference number: 1 (lower is better) Translates to: ILHGASSTLNGWITD*RSSTWIFLAMINLL Trigger: TAACAAGTTAATCATGGCCAAAAAGATCCAGGTGCTTGATCTGCAGTCTGTTATCCAGCCATTTAATGTTGAAGAAGCCCCGTGCAATAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
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| 3UTR CCA 90 bp | TCTTCAACATTAAATGGCTGGATAACAGACTGCAGATCAAGCACCTaGATCTTTTTGGCCATGATTAACTTGTTAATCTCAGTGCCTTCC | + |
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Preference number: 1 (lower is better) Translates to: SSTLNGWITDCRSST*IFLAMINLLISVPS Trigger: GGAAGGCACTGAGATTAACAAGTTAATCATGGCCAAAAAGATCCAGGTGCTTGATCTGCAGTCTGTTATCCAGCCATTTAATGTTGAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
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| 3UTR CCA 90 bp | CATGGCTTCAATGTTGAGGGTCTCATCTATTTCCTTGTTGCAATCTaGACATTTCACCTTCTGATGCTCTGTTATTTCTTCTTGGTTCAT | + |
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Preference number: 1 (lower is better) Translates to: HGFNVEGLIYFLVAI*TFHLLMLCYFFLVH Trigger: ATGAACCAAGAAGAAATAACAGAGCATCAGAAGGTGAAATGTCCAGATTGCAACAAGGAAATAGATGAGACCCTCAACATTGAAGCCATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162774.7 |
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| 3UTR TCA 90 bp | GTGATGTGGTTGACATCATCACCAAAGATGGTGGCCATCCATAACTaGATCACTTTTGTAAATACGATTCCAGTAATGAAGCTTTCAACA | + |
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Preference number: 1 (lower is better) Translates to: VMWLTSSPKMVAIHN*ITFVNTIPVMKLST Trigger: TGTTGAAAGCTTCATTACTGGAATCGTATTTACAAAAGTGATTCAGTTATGGATGGCCACCATCTTTGGTGATGATGTCAACCACATCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162774.7 |
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| 3UTR CCA 90 bp | TTCAGAGGTTTCATCCAATGTTTCAAAAGATTCTCTTTCAGAATCTaGTTTCATCGAAATTCTTCGAGGTGGGATGTACTTTCTTACATT | + |
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Preference number: 1 (lower is better) Translates to: FRGFIQCFKRFSFRI*FHRNSSRWDVLSYI Trigger: AATGTAAGAAAGTACATCCCACCTCGAAGAATTTCGATGAAACCAGATTCTGAAAGAGAATCTTTTGAAACATTGGATGAAACCTCTGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
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| 3UTR-3UTR CCA 90 bp | TGGCAGTCCTCAGCAGATCCATGGATGAGGACAACGTGGGTTACCGTTTCGTCATCCTCAGCAGATCCATaGATGAGGACAACGTGGGTT | + |
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Preference number: 2 (lower is better) Translates to: WQSSADPWMRTTWVTVSSSSADP*MRTTWV Trigger: AACCCACGTTGTCCTCATCCATGGATCTGCTGAGGA...TGACGAAACGGTAACCCACGTTGTCCTCATCCATGGATCTGCTGAGGACTGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
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| 3UTR CAA 90 bp | TGTGCTGACAGGAGACGTCTGTTGGTCAGCTCCATGGCTTCAATGTaGAGGGTCTCATCTATTTCCTTGTTGCAATCTGGACATTTCACC | + |
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Preference number: 2 (lower is better) Translates to: CADRRRLLVSSMASM*RVSSISLLQSGHFT Trigger: GGTGAAATGTCCAGATTGCAACAAGGAAATAGATGAGACCCTCAACATTGAAGCCATGGAGCTGACCAACAGACGTCTCCTGTCAGCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162774.7 |
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| 3UTR-3UTR GCA 90 bp | GCCTACCAACACCTGCACTGCACTCTGGGACAGAACCTCATTCCTGTACTGTCGTTTGTCAAATTTGAGTaGCATGGCTGTAGATTTGGT | + |
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Preference number: 2 (lower is better) Translates to: AYQHLHCTLGQNLIPVLSFVKFE*HGCRFG Trigger: ACCAAATCTACAGCCATGGCACTCAAATTTGACAAA...CGACAGTACAGGAATGAGGTTCTGTCCCAGAGTGCAGTGCAGGTGTTGGTAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162774.7 |
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| 3UTR-3UTR CCA 90 bp | TGGCAGTCCTCAGCAGATCCATGGATGAGGACAACGTGGGTTACCGTTTCGTCACGAAATTCTTCGAGGTaGGATGTACTTTCTTACATT | + |
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Preference number: 2 (lower is better) Translates to: WQSSADPWMRTTWVTVSSRNSSR*DVLSYI Trigger: AATGTAAGAAAGTACATCCCACCTCGAAGAATTTCG...TGACGAAACGGTAACCCACGTTGTCCTCATCCATGGATCTGCTGAGGACTGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
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| 3UTR CAA 90 bp | ATACAGCATCATGGCAGAGGAGCTGTTCTGACCTCCACAACAGTTTaGCAGGTGGCAGAATATTGCATCCGTTCTTTAGTCAGACAGTTT | + |
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Preference number: 2 (lower is better) Translates to: IQHHGRGAVLTSTTV*QVAEYCIRSLVRQF Trigger: AAACTGTCTGACTAAAGAACGGATGCAATATTCTGCCACCTGCAAAACTGTTGTGGAGGTCAGAACAGCTCCTCTGCCATGATGCTGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162151.3 |
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| 3UTR CAA 90 bp | CTACTGGCCCTTAGGCACATGCTAAGCACTAAAAACATTCTAAGTTaGATACAGCATCATGGCAGAGGAGCTGTTCTGACCTCCACAACA | + |
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Preference number: 2 (lower is better) Translates to: LLALRHMLSTKNILS*IQHHGRGAVLTSTT Trigger: TGTTGTGGAGGTCAGAACAGCTCCTCTGCCATGATGCTGTATCAAACTTAGAATGTTTTTAGTGCTTAGCATGTGCCTAAGGGCCAGTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162151.3 |
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| 3UTR-3UTR GCA 90 bp | CTCTCCTATTATCTCCCCGCTGAGCAGGTACTCTGTGTGGGGCAGTGGATGAATGACTATTCTATGGCATaGATGAAGAAACATGTATCT | + |
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Preference number: 2 (lower is better) Translates to: LSYYLPAEQVLCVGQWMNDYSMA*MKKHVS Trigger: AGATACATGTTTCTTCATGCATGCCATAGAATAGTC...ATTCATCCACTGCCCCACACAGAGTACCTGCTCAGCGGGGAGATAATAGGAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
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| 3UTR-3UTR GCA 90 bp | CTCTCCTATTATCTCCCCGCTGAGCAGGTACTCTGTGTGGGGCAGTGGATGAATCTTTTGTCTATGATTTaGAGCAGTTTTGGTGTTACA | + |
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Preference number: 2 (lower is better) Translates to: LSYYLPAEQVLCVGQWMNLLSMI*SSFGVT Trigger: TGTAACACCAAAACTGCTGCAAATCATAGACAAAAG...ATTCATCCACTGCCCCACACAGAGTACCTGCTCAGCGGGGAGATAATAGGAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
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| 3UTR-3UTR GCA 90 bp | TCTTCGAGGTGGGATGTACTTTCTTACATTCCATCTGAATTTTCTTACAGCAATGCGCCTACCAACACCTaGACTGCACTCTGGGACAGA | + |
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Preference number: 2 (lower is better) Translates to: SSRWDVLSYIPSEFSYSNAPTNT*TALWDR Trigger: TCTGTCCCAGAGTGCAGTGCAGGTGTTGGTAGGCGC...ATTGCTGTAAGAAAATTCAGATGGAATGTAAGAAAGTACATCCCACCTCGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162774.7 |
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| 3UTR-3UTR CCA 90 bp | GTCTATGATTTGCAGCAGTTTTGGTGTTACAAGCTTCAAGATGCGCAGTATACGGTAGACATGACCTTGTaGGCTAGGGTGTGGTTCACA | + |
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Preference number: 2 (lower is better) Translates to: VYDLQQFWCYKLQDAQYTVDMTL*ARVWFT Trigger: TGTGAACCACACCCTAGCCCACAAGGTCATGTCTAC...CGTATACTGCGCATCTTGAAGCTTGTAACACCAAAACTGCTGCAAATCATAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162774.7 |
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| 3UTR CAA 90 bp | TCAGTGCCTTCCACCTTGTGTATAATTCCTTTGGACCTGAAAGCCTaGACAATTTCTCTGGCCATATTGAGCATGACATTAATCTCCTCC | + |
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Preference number: 2 (lower is better) Translates to: SVPSTLCIIPLDLKA*TISLAILSMTLISS Trigger: GGAGGAGATTAATGTCATGCTCAATATGGCCAGAGAAATTGTCAAGGCTTTCAGGTCCAAAGGAATTATACACAAGGTGGAAGGCACTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
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| 3UTR-3UTR TCA 90 bp | CTTTCCATCTCCAGGTGTGGTTTTGACCTTTTAAGCTTAACCATGCCTGAAATTGTCGAATCACGTTCATaGAGACCACAGTCTCAGTTA | + |
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Preference number: 2 (lower is better) Translates to: LSISRCGFDLLSLTMPEIVESRS*RPQSQL Trigger: TAACTGAGACTGTGGTCTTCATGAACGTGATTCGAC...AATTTCAGGCATGGTTAAGCTTAAAAGGTCAAAACCACACCTGGAGATGGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
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| 3UTR-3UTR CCA 90 bp | ATTTGCAGCAGTTTTGGTGTTACAAGCTTCAAGATGCGCAGTATACGAAGGAGTCATCATCACCAAAGATaGTGGCCATCCATAACTGAA | + |
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Preference number: 2 (lower is better) Translates to: ICSSFGVTSFKMRSIRRSHHHQR*WPSITE Trigger: TTCAGTTATGGATGGCCACCATCTTTGGTGATGATG...ACTCCTTCGTATACTGCGCATCTTGAAGCTTGTAACACCAAAACTGCTGCAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162774.7 |
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| 3UTR-3UTR CCA 90 bp | AGAGGTTTCATCCAATGTTTCAAAAGATTCTCTTTCAGAATCTGGTTTCATCGAACCTGCACTGCACTCTaGGACAGAACCTCATTCCTG | + |
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Preference number: 2 (lower is better) Translates to: RGFIQCFKRFSFRIWFHRTCTAL*DRTSFL Trigger: CAGGAATGAGGTTCTGTCCCAGAGTGCAGTGCAGGT...TCGATGAAACCAGATTCTGAAAGAGAATCTTTTGAAACATTGGATGAAACCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162774.7 |
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| 3UTR CAA 90 bp | TTGACAATTTCTCTGGCCATATTGAGCATGACATTAATCTCCTCCTaGGTTTTCATAGTGACAGCGATTTCCGGATGGTCATACTCTAAG | + |
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Preference number: 2 (lower is better) Translates to: LTISLAILSMTLISS*VFIVTAISGWSYSK Trigger: CTTAGAGTATGACCATCCGGAAATCGCTGTCACTATGAAAACCAAGGAGGAGATTAATGTCATGCTCAATATGGCCAGAGAAATTGTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
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| 3UTR CAA 90 bp | ATAATTCCTTTGGACCTGAAAGCCTTGACAATTTCTCTGGCCATATaGAGCATGACATTAATCTCCTCCTTGGTTTTCATAGTGACAGCG | + |
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Preference number: 2 (lower is better) Translates to: IIPLDLKALTISLAI*SMTLISSLVFIVTA Trigger: CGCTGTCACTATGAAAACCAAGGAGGAGATTAATGTCATGCTCAATATGGCCAGAGAAATTGTCAAGGCTTTCAGGTCCAAAGGAATTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
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| 3UTR CAA 90 bp | GTAGACATGACCTTGTGGGCTAGGGTGTGGTTCACACTCTTTGACTaGAATCTGATATGCACAACACCACTATATATAACTAAGGATAAC | + |
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Preference number: 2 (lower is better) Translates to: VDMTLWARVWFTLFD*NLICTTPLYITKDN Trigger: GTTATCCTTAGTTATATATAGTGGTGTTGTGCATATCAGATTCAAGTCAAAGAGTGTGAACCACACCCTAGCCCACAAGGTCATGTCTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162774.7 |
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| 3UTR-3UTR TCA 90 bp | TTCAACATTAAATGGCTGGATAACAGACTGCAGATCAAGCACCTGGATCTTTTTTGGGGATGTCTCTTATaGAGGCATTGCAGAGTTTCA | + |
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Preference number: 2 (lower is better) Translates to: FNIKWLDNRLQIKHLDLFWGCLL*RHCRVS Trigger: TGAAACTCTGCAATGCCTTCATAAGAGACATCCCCA...AAAAAGATCCAGGTGCTTGATCTGCAGTCTGTTATCCAGCCATTTAATGTTGAA 41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
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| 3UTR-3UTR TCA 90 bp | ATTTGCAGCAGTTTTGGTGTTACAAGCTTCAAGATGCGCAGTATACGAAGGAGTGTGGCCATCCATAACTaGATCACTTTTGTAAATACG | + |
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Preference number: 2 (lower is better) Translates to: ICSSFGVTSFKMRSIRRSVAIHN*ITFVNT Trigger: CGTATTTACAAAAGTGATTCAGTTATGGATGGCCAC...ACTCCTTCGTATACTGCGCATCTTGAAGCTTGTAACACCAAAACTGCTGCAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162774.7 |
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| 3UTR CAA 90 bp | ATTAACTTGTTAATCTCAGTGCCTTCCACCTTGTGTATAATTCCTTaGGACCTGAAAGCCTTGACAATTTCTCTGGCCATATTGAGCATG | + |
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Preference number: 2 (lower is better) Translates to: INLLISVPSTLCIIP*DLKALTISLAILSM Trigger: CATGCTCAATATGGCCAGAGAAATTGTCAAGGCTTTCAGGTCCAAAGGAATTATACACAAGGTGGAAGGCACTGAGATTAACAAGTTAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
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| 3UTR-3UTR TCA 90 bp | TGCAATCTGATCAATTATATTCAGTACATCCATTTCCCCTTGGACATAGCCTTTGTCGAATCACGTTCATaGAGACCACAGTCTCAGTTA | + |
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Preference number: 2 (lower is better) Translates to: CNLINYIQYIHFPLDIAFVESRS*RPQSQL Trigger: TAACTGAGACTGTGGTCTTCATGAACGTGATTCGAC...AAAGGCTATGTCCAAGGGGAAATGGATGTACTGAATATAATTGATCAGATTGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
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| 3UTR-3UTR TCA 90 bp | TCTTCGAGGTGGGATGTACTTTCTTACATTCCATCTGAATTTTCTTACAGCAATGTGTGGGGCAGTGGATaGATTTTAATCTCTGACTCT | + |
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Preference number: 2 (lower is better) Translates to: SSRWDVLSYIPSEFSYSNVWGSG*ILISDS Trigger: AGAGTCAGAGATTAAAATTCATCCACTGCCCCACAC...ATTGCTGTAAGAAAATTCAGATGGAATGTAAGAAAGTACATCCCACCTCGAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
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| 3UTR-3UTR TCA 90 bp | TCTTCGAGGTGGGATGTACTTTCTTACATTCCATCTGAATTTTCTTACAGCAATCCATGGCTTCAATGTTaGGGGTCTCATCTATTTCCT | + |
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Preference number: 2 (lower is better) Translates to: SSRWDVLSYIPSEFSYSNPWLQC*GSHLFP Trigger: AGGAAATAGATGAGACCCTCAACATTGAAGCCATGG...ATTGCTGTAAGAAAATTCAGATGGAATGTAAGAAAGTACATCCCACCTCGAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162774.7 |
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| 3UTR-3UTR CCA 90 bp | ACTTGCAATCTGATCAATTATATTCAGTACATCCATTTCCCCTTGGACATAGCCCATCACCAAAGATGGTaGCCATCCATAACTGAATCA | + |
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Preference number: 2 (lower is better) Translates to: TCNLINYIQYIHFPLDIAHHQRW*PSITES Trigger: TGATTCAGTTATGGATGGCCACCATCTTTGGTGATG...GGCTATGTCCAAGGGGAAATGGATGTACTGAATATAATTGATCAGATTGCAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162774.7 |
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| 3UTR CAA 90 bp | ATCTTTTTGGCCATGATTAACTTGTTAATCTCAGTGCCTTCCACCTaGTGTATAATTCCTTTGGACCTGAAAGCCTTGACAATTTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: IFLAMINLLISVPST*CIIPLDLKALTISL Trigger: CAGAGAAATTGTCAAGGCTTTCAGGTCCAAAGGAATTATACACAAGGTGGAAGGCACTGAGATTAACAAGTTAATCATGGCCAAAAAGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
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| 3UTR-3UTR GCA 90 bp | AGAGGTTTCATCCAATGTTTCAAAAGATTCTCTTTCAGAATCTGGTTTCATCGACCTCCACAACAGTTTTaGAGGTGGCAGAATATTGCA | + |
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Preference number: 2 (lower is better) Translates to: RGFIQCFKRFSFRIWFHRPPQQF*RWQNIA Trigger: TGCAATATTCTGCCACCTGCAAAACTGTTGTGGAGG...TCGATGAAACCAGATTCTGAAAGAGAATCTTTTGAAACATTGGATGAAACCTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162151.3 |
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| 3UTR-3UTR CCA 90 bp | CTTTCCATCTCCAGGTGTGGTTTTGACCTTTTAAGCTTAACCATGCCTGAAATTGATTTGCAGCAGTTTTaGTGTTACAAGCTTCAAGAT | + |
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Preference number: 2 (lower is better) Translates to: LSISRCGFDLLSLTMPEIDLQQF*CYKLQD Trigger: ATCTTGAAGCTTGTAACACCAAAACTGCTGCAAATC...AATTTCAGGCATGGTTAAGCTTAAAAGGTCAAAACCACACCTGGAGATGGAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
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| 3UTR-3UTR CCA 90 bp | ACTTGCAATCTGATCAATTATATTCAGTACATCCATTTCCCCTTGGACATAGCCCGAAATGATATCTGCTaGCTCATCCTTTTGTCTATG | + |
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Preference number: 2 (lower is better) Translates to: TCNLINYIQYIHFPLDIARNDIC*LILLSM Trigger: CATAGACAAAAGGATGAGCCAGCAGATATCATTTCG...GGCTATGTCCAAGGGGAAATGGATGTACTGAATATAATTGATCAGATTGCAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
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| 3UTR-3UTR CCA 90 bp | ACTTGCAATCTGATCAATTATATTCAGTACATCCATTTCCCCTTGGACATAGCCGATTTGCAGCAGTTTTaGTGTTACAAGCTTCAAGAT | + |
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Preference number: 2 (lower is better) Translates to: TCNLINYIQYIHFPLDIADLQQF*CYKLQD Trigger: ATCTTGAAGCTTGTAACACCAAAACTGCTGCAAATC...GGCTATGTCCAAGGGGAAATGGATGTACTGAATATAATTGATCAGATTGCAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
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| 3UTR-3UTR CCA 90 bp | ATTCTCTTTCAGAATCTGGTTTCATCGAAATTCTTCGAGGTGGGATGTACTTTCTACATAGATTCCTTCTaGCTCATCACCTTCTTCAAA | + |
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Preference number: 2 (lower is better) Translates to: ILFQNLVSSKFFEVGCTFYIDSF*LITFFK Trigger: TTTGAAGAAGGTGATGAGCCAGAAGGAATCTATGTA...GAAAGTACATCCCACCTCGAAGAATTTCGATGAAACCAGATTCTGAAAGAGAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
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| 3UTR-3UTR CCA 90 bp | TTCAACATTAAATGGCTGGATAACAGACTGCAGATCAAGCACCTGGATCTTTTTTACATAGATTCCTTCTaGCTCATCACCTTCTTCAAA | + |
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Preference number: 2 (lower is better) Translates to: FNIKWLDNRLQIKHLDLFYIDSF*LITFFK Trigger: TTTGAAGAAGGTGATGAGCCAGAAGGAATCTATGTA...AAAAAGATCCAGGTGCTTGATCTGCAGTCTGTTATCCAGCCATTTAATGTTGAA 38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
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| 3UTR-3UTR CCA 90 bp | GTGGCAGAATATTGCATCCGTTCTTTAGTCAGACAGTTTAACTCTCCTATTATCCGAAATTCTTCGAGGTaGGATGTACTTTCTTACATT | + |
|
Preference number: 2 (lower is better) Translates to: VAEYCIRSLVRQFNSPIIRNSSR*DVLSYI Trigger: AATGTAAGAAAGTACATCCCACCTCGAAGAATTTCG...GATAATAGGAGAGTTAAACTGTCTGACTAAAGAACGGATGCAATATTCTGCCAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
||
| 3UTR-3UTR GCA 90 bp | ACTTGCAATCTGATCAATTATATTCAGTACATCCATTTCCCCTTGGACATAGCCGACTATTCTATGGCATaGATGAAGAAACATGTATCT | + |
|
Preference number: 2 (lower is better) Translates to: TCNLINYIQYIHFPLDIADYSMA*MKKHVS Trigger: AGATACATGTTTCTTCATGCATGCCATAGAATAGTC...GGCTATGTCCAAGGGGAAATGGATGTACTGAATATAATTGATCAGATTGCAAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
||
| 3UTR-3UTR GCA 90 bp | TTCAACATTAAATGGCTGGATAACAGACTGCAGATCAAGCACCTGGATCTTTTTCTTTTGTCTATGATTTaGAGCAGTTTTGGTGTTACA | + |
|
Preference number: 2 (lower is better) Translates to: FNIKWLDNRLQIKHLDLFLLSMI*SSFGVT Trigger: TGTAACACCAAAACTGCTGCAAATCATAGACAAAAG...AAAAAGATCCAGGTGCTTGATCTGCAGTCTGTTATCCAGCCATTTAATGTTGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
||
| 3UTR GCA 72 bp | ACCAAAGCTTCCAGCTGCGCCTACCAACACCTGCACTaGACTCTGGGACAGAACCTCATTCCTGTACTGTCG | + |
|
Preference number: 3 (lower is better) Translates to: TKASSCAYQHLH*TLGQNLIPVLS Trigger: CGACAGTACAGGAATGAGGTTCTGTCCCAGAGTGCAGTGCAGGTGTTGGTAGGCGCAGCTGGAAGCTTTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162774.7 |
||
| 3UTR GCA 72 bp | TTCTCACCAAAGCTTCCAGCTGCGCCTACCAACACCTaGACTGCACTCTGGGACAGAACCTCATTCCTGTAC | + |
|
Preference number: 3 (lower is better) Translates to: FSPKLPAAPTNT*TALWDRTSFLY Trigger: GTACAGGAATGAGGTTCTGTCCCAGAGTGCAGTGCAGGTGTTGGTAGGCGCAGCTGGAAGCTTTGGTGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162774.7 |
||
| 3UTR-3UTR CAA 90 bp | CTCCCTTCTTCTCACCAAAGCTTCCAGCTGCGCCTACCAACACCTGCACTGCACTTGGACCTGAAAGCCTaGACAATTTCTCTGGCCATA | + |
|
Preference number: 3 (lower is better) Translates to: LPSSHQSFQLRLPTPALHLDLKA*TISLAI Trigger: TATGGCCAGAGAAATTGTCAAGGCTTTCAGGTCCAA...GTGCAGTGCAGGTGTTGGTAGGCGCAGCTGGAAGCTTTGGTGAGAAGAAGGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162774.7 |
||
| 3UTR-3UTR CAA 90 bp | CTCCCTTCTTCTCACCAAAGCTTCCAGCTGCGCCTACCAACACCTGCACTGCACATGAGAGTGATGTGGTaGACATCATCACCAAAGATG | + |
|
Preference number: 3 (lower is better) Translates to: LPSSHQSFQLRLPTPALHMRVMW*TSSPKM Trigger: CATCTTTGGTGATGATGTCAACCACATCACTCTCAT...GTGCAGTGCAGGTGTTGGTAGGCGCAGCTGGAAGCTTTGGTGAGAAGAAGGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162774.7 |
||
| 3UTR-3UTR CAA 90 bp | TGGCAGTCCTCAGCAGATCCATGGATGAGGACAACGTGGGTTACCGTTTCGTCATTGGACCTGAAAGCCTaGACAATTTCTCTGGCCATA | + |
|
Preference number: 3 (lower is better) Translates to: WQSSADPWMRTTWVTVSSLDLKA*TISLAI Trigger: TATGGCCAGAGAAATTGTCAAGGCTTTCAGGTCCAA...TGACGAAACGGTAACCCACGTTGTCCTCATCCATGGATCTGCTGAGGACTGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
||
| 3UTR-3UTR CAA 90 bp | TGGCAGTCCTCAGCAGATCCATGGATGAGGACAACGTGGGTTACCGTTTCGTCATCTCTTATGAAGGCATaGCAGAGTTTCAACTGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: WQSSADPWMRTTWVTVSSSLMKA*QSFNCS Trigger: GCTGCAGTTGAAACTCTGCAATGCCTTCATAAGAGA...TGACGAAACGGTAACCCACGTTGTCCTCATCCATGGATCTGCTGAGGACTGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
||
| 3UTR-3UTR CAA 90 bp | CTCCCTTCTTCTCACCAAAGCTTCCAGCTGCGCCTACCAACACCTGCACTGCACTCATCTATTTCCTTGTaGCAATCTGGACATTTCACC | + |
|
Preference number: 3 (lower is better) Translates to: LPSSHQSFQLRLPTPALHSSISL*QSGHFT Trigger: GGTGAAATGTCCAGATTGCAACAAGGAAATAGATGA...GTGCAGTGCAGGTGTTGGTAGGCGCAGCTGGAAGCTTTGGTGAGAAGAAGGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162774.7 |
||
| 3UTR TCA 72 bp | GGAGACGTCTGTTGGTCAGCTCCATGGCTTCAATGTTaGGGGTCTCATCTATTTCCTTGTTGCAATCTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: GDVCWSAPWLQC*GSHLFPCCNLD Trigger: GTCCAGATTGCAACAAGGAAATAGATGAGACCCTCAACATTGAAGCCATGGAGCTGACCAACAGACGTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162774.7 |
||
| 3UTR CCA 72 bp | CCATGGGATATTGCACGGGGCTTCTTCAACATTAAATaGCTGGATAACAGACTGCAGATCAAGCACCTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: PWDIARGFFNIK*LDNRLQIKHLD Trigger: ATCCAGGTGCTTGATCTGCAGTCTGTTATCCAGCCATTTAATGTTGAAGAAGCCCCGTGCAATATCCCATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
||
| 3UTR-3UTR CAA 90 bp | ATACAGCATCATGGCAGAGGAGCTGTTCTGACCTCCACAACAGTTTTGCAGGTGGAAGAAACATGTATCTaGATGGAACCCCTTTATCTT | + |
|
Preference number: 3 (lower is better) Translates to: IQHHGRGAVLTSTTVLQVEETCI*MEPLYL Trigger: AAGATAAAGGGGTTCCATCAAGATACATGTTTCTTC...CACCTGCAAAACTGTTGTGGAGGTCAGAACAGCTCCTCTGCCATGATGCTGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162151.3 |
||
| 3UTR GCA 72 bp | GGGGCTTCTTCAACATTAAATGGCTGGATAACAGACTaGAGATCAAGCACCTGGATCTTTTTGGCCATGATT | + |
|
Preference number: 3 (lower is better) Translates to: GASSTLNGWITD*RSSTWIFLAMI Trigger: AATCATGGCCAAAAAGATCCAGGTGCTTGATCTGCAGTCTGTTATCCAGCCATTTAATGTTGAAGAAGCCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
||
| 3UTR-3UTR CAA 90 bp | ATTCTCTTTCAGAATCTGGTTTCATCGAAATTCTTCGAGGTGGGATGTACTTTCGTGTTCTCGGATCTTTaGGGCAGTAATGGCAAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: ILFQNLVSSKFFEVGCTFVFSDL*GSNGKS Trigger: GGACTTGCCATTACTGCCCAAAAGATCCGAGAACAC...GAAAGTACATCCCACCTCGAAGAATTTCGATGAAACCAGATTCTGAAAGAGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
||
| 3UTR TCA 72 bp | AGATGTCAGTTTTCATGGACTTGGGGATGTCTCTTATaGAGGCATTGCAGAGTTTCAACTGCAGCTTGTAGT | + |
|
Preference number: 3 (lower is better) Translates to: RCQFSWTWGCLL*RHCRVSTAACS Trigger: ACTACAAGCTGCAGTTGAAACTCTGCAATGCCTTCATAAGAGACATCCCCAAGTCCATGAAAACTGACATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
||
| 3UTR-3UTR CAA 90 bp | TTCAACATTAAATGGCTGGATAACAGACTGCAGATCAAGCACCTGGATCTTTTTTCAGTGCCTTCCACCTaGTGTATAATTCCTTTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: FNIKWLDNRLQIKHLDLFSVPST*CIIPLD Trigger: GTCCAAAGGAATTATACACAAGGTGGAAGGCACTGA...AAAAAGATCCAGGTGCTTGATCTGCAGTCTGTTATCCAGCCATTTAATGTTGAA 41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
||
| 3UTR-3UTR CAA 90 bp | GTGGCAGAATATTGCATCCGTTCTTTAGTCAGACAGTTTAACTCTCCTATTATCTCAGTGCCTTCCACCTaGTGTATAATTCCTTTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: VAEYCIRSLVRQFNSPIISVPST*CIIPLD Trigger: GTCCAAAGGAATTATACACAAGGTGGAAGGCACTGA...GATAATAGGAGAGTTAAACTGTCTGACTAAAGAACGGATGCAATATTCTGCCAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
||
| 3UTR-3UTR CAA 90 bp | GTGGCAGAATATTGCATCCGTTCTTTAGTCAGACAGTTTAACTCTCCTATTATCTCCATGGCTTCAATGTaGAGGGTCTCATCTATTTCC | + |
|
Preference number: 3 (lower is better) Translates to: VAEYCIRSLVRQFNSPIISMASM*RVSSIS Trigger: GGAAATAGATGAGACCCTCAACATTGAAGCCATGGA...GATAATAGGAGAGTTAAACTGTCTGACTAAAGAACGGATGCAATATTCTGCCAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162774.7 |
||
| 3UTR-3UTR CAA 90 bp | ATTTGCAGCAGTTTTGGTGTTACAAGCTTCAAGATGCGCAGTATACGAAGGAGTGAAGAAACATGTATCTaGATGGAACCCCTTTATCTT | + |
|
Preference number: 3 (lower is better) Translates to: ICSSFGVTSFKMRSIRRSEETCI*MEPLYL Trigger: AAGATAAAGGGGTTCCATCAAGATACATGTTTCTTC...ACTCCTTCGTATACTGCGCATCTTGAAGCTTGTAACACCAAAACTGCTGCAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
||
| 3UTR-3UTR CAA 90 bp | TGCAATCTGATCAATTATATTCAGTACATCCATTTCCCCTTGGACATAGCCTTTTGCTGGCTCATCCTTTaGTCTATGATTTGCAGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: CNLINYIQYIHFPLDIAFCWLIL*SMICSS Trigger: ACTGCTGCAAATCATAGACAAAAGGATGAGCCAGCA...AAAGGCTATGTCCAAGGGGAAATGGATGTACTGAATATAATTGATCAGATTGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
||
| 3UTR-3UTR CAA 90 bp | ATTCTCTTTCAGAATCTGGTTTCATCGAAATTCTTCGAGGTGGGATGTACTTTCTACATCCATTTCCCCTaGGACATAGCCTTTCAGTAT | + |
|
Preference number: 3 (lower is better) Translates to: ILFQNLVSSKFFEVGCTFYIHFP*DIAFQY Trigger: ATACTGAAAGGCTATGTCCAAGGGGAAATGGATGTA...GAAAGTACATCCCACCTCGAAGAATTTCGATGAAACCAGATTCTGAAAGAGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
||
| 3UTR-3UTR CAA 90 bp | TTCAACATTAAATGGCTGGATAACAGACTGCAGATCAAGCACCTGGATCTTTTTTACATCCATTTCCCCTaGGACATAGCCTTTCAGTAT | + |
|
Preference number: 3 (lower is better) Translates to: FNIKWLDNRLQIKHLDLFYIHFP*DIAFQY Trigger: ATACTGAAAGGCTATGTCCAAGGGGAAATGGATGTA...AAAAAGATCCAGGTGCTTGATCTGCAGTCTGTTATCCAGCCATTTAATGTTGAA 40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
||
| 3UTR-3UTR CAA 90 bp | ATTCTCTTTCAGAATCTGGTTTCATCGAAATTCTTCGAGGTGGGATGTACTTTCTTGGCCATGATTAACTaGTTAATCTCAGTGCCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: ILFQNLVSSKFFEVGCTFLAMIN*LISVPS Trigger: GGAAGGCACTGAGATTAACAAGTTAATCATGGCCAA...GAAAGTACATCCCACCTCGAAGAATTTCGATGAAACCAGATTCTGAAAGAGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
||
| 3UTR-3UTR CAA 90 bp | CTTTCCATCTCCAGGTGTGGTTTTGACCTTTTAAGCTTAACCATGCCTGAAATTAGCACCTGGATCTTTTaGGCCATGATTAACTTGTTA | + |
|
Preference number: 3 (lower is better) Translates to: LSISRCGFDLLSLTMPEISTWIF*AMINLL Trigger: TAACAAGTTAATCATGGCCAAAAAGATCCAGGTGCT...AATTTCAGGCATGGTTAAGCTTAAAAGGTCAAAACCACACCTGGAGATGGAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
||
| 3UTR TCA 72 bp | ACCGAAATGATATCTGCTGGCTCATCCTTTTGTCTATaGTTTGCAGCAGTTTTGGTGTTACAAGCTTCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: TEMISAGSSFCL*FAAVLVLQASR Trigger: TCTTGAAGCTTGTAACACCAAAACTGCTGCAAATCATAGACAAAAGGATGAGCCAGCAGATATCATTTCGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
||
| 3UTR-3UTR CAA 90 bp | CATTGCATATGGATTTTGAAGTATAATTGCATTGTCAACCATGTTCCAGTCAGCTTGGCCATGATTAACTaGTTAATCTCAGTGCCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: HCIWILKYNCIVNHVPVSLAMIN*LISVPS Trigger: GGAAGGCACTGAGATTAACAAGTTAATCATGGCCAA...GCTGACTGGAACATGGTTGACAATGCAATTATACTTCAAAATCCATATGCAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162774.7 |
||
| 3UTR CCA 72 bp | TTAAATGGCTGGATAACAGACTGCAGATCAAGCACCTaGATCTTTTTGGCCATGATTAACTTGTTAATCTCA | + |
|
Preference number: 3 (lower is better) Translates to: LNGWITDCRSST*IFLAMINLLIS Trigger: TGAGATTAACAAGTTAATCATGGCCAAAAAGATCCAGGTGCTTGATCTGCAGTCTGTTATCCAGCCATTTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
||
| 3UTR TCA 72 bp | TTGACATCATCACCAAAGATGGTGGCCATCCATAACTaGATCACTTTTGTAAATACGATTCCAGTAATGAAG | + |
|
Preference number: 3 (lower is better) Translates to: LTSSPKMVAIHN*ITFVNTIPVMK Trigger: CTTCATTACTGGAATCGTATTTACAAAAGTGATTCAGTTATGGATGGCCACCATCTTTGGTGATGATGTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162774.7 |
||
| 3UTR-3UTR CAA 90 bp | AGAGGTTTCATCCAATGTTTCAAAAGATTCTCTTTCAGAATCTGGTTTCATCGATTGTGTATAATTCCTTaGGACCTGAAAGCCTTGACA | + |
|
Preference number: 3 (lower is better) Translates to: RGFIQCFKRFSFRIWFHRLCIIP*DLKALT Trigger: TGTCAAGGCTTTCAGGTCCAAAGGAATTATACACAA...TCGATGAAACCAGATTCTGAAAGAGAATCTTTTGAAACATTGGATGAAACCTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
||
| 3UTR TCA 72 bp | TCTATTTCCTTGTTGCAATCTGGACATTTCACCTTCTaGTGCTCTGTTATTTCTTCTTGGTTCATTGCATAT | + |
|
Preference number: 3 (lower is better) Translates to: SISLLQSGHFTF*CSVISSWFIAY Trigger: ATATGCAATGAACCAAGAAGAAATAACAGAGCATCAGAAGGTGAAATGTCCAGATTGCAACAAGGAAATAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162774.7 |
||
| 3UTR CCA 72 bp | TTCATCCAATGTTTCAAAAGATTCTCTTTCAGAATCTaGTTTCATCGAAATTCTTCGAGGTGGGATGTACTT | + |
|
Preference number: 3 (lower is better) Translates to: FIQCFKRFSFRI*FHRNSSRWDVL Trigger: AAGTACATCCCACCTCGAAGAATTTCGATGAAACCAGATTCTGAAAGAGAATCTTTTGAAACATTGGATGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
||
| 3UTR TCA 72 bp | TCAAATTCATTTGTGAAGACTATTCTATGGCATGCATaGAGAAACATGTATCTTGATGGAACCCCTTTATCT | + |
|
Preference number: 3 (lower is better) Translates to: SNSFVKTILWHA*RNMYLDGTPLS Trigger: AGATAAAGGGGTTCCATCAAGATACATGTTTCTTCATGCATGCCATAGAATAGTCTTCACAAATGAATTTGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
||
| 3UTR TCA 72 bp | AACAATATCTGTTTAGTCTGTTTGGAACTTGCAATCTaGTCAATTATATTCAGTACATCCATTTCCCCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: NNICLVCLELAI*SIIFSTSISPW Trigger: CCAAGGGGAAATGGATGTACTGAATATAATTGATCAGATTGCAAGTTCCAAACAGACTAAACAGATATTGTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
||
| 3UTR CAA 72 bp | CATGGCAGAGGAGCTGTTCTGACCTCCACAACAGTTTaGCAGGTGGCAGAATATTGCATCCGTTCTTTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: HGRGAVLTSTTV*QVAEYCIRSLV Trigger: GACTAAAGAACGGATGCAATATTCTGCCACCTGCAAAACTGTTGTGGAGGTCAGAACAGCTCCTCTGCCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162151.3 |
||
| 3UTR CAA 72 bp | AGGAGACGTCTGTTGGTCAGCTCCATGGCTTCAATGTaGAGGGTCTCATCTATTTCCTTGTTGCAATCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RRRLLVSSMASM*RVSSISLLQSG Trigger: TCCAGATTGCAACAAGGAAATAGATGAGACCCTCAACATTGAAGCCATGGAGCTGACCAACAGACGTCTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162774.7 |
||
| CDS-3UTR TCA 90 bp | AATGGCTGGATAACAGACTGCAGATCAAGCACCTGGATCTTTTTGGCCATGATTAAGATAGTATCAGGATaGTTTCAGGGAGGTCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NGWITDCRSSTWIFLAMIKIVSG*FQGGPG Trigger: CCCAGGACCTCCCTGAAATCATCCTGATACTATCTT...AATCATGGCCAAAAAGATCCAGGTGCTTGATCTGCAGTCTGTTATCCAGCCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
||
| CDS-3UTR GCA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAAGCGCCTACCAACACCTaGACTGCACTCTGGGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: FTLSHKRHINFGLSLSPEAPTNT*TALWDR Trigger: TCTGTCCCAGAGTGCAGTGCAGGTGTTGGTAGGCGC...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCCATCTCCAGGTGTGGTTTTGACCTTTTAAGCTTAACCATGCCTGAAATTGTAGACATGACCTTGTaGGCTAGGGTGTGGTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: LSISRCGFDLLSLTMPEIVDMTL*ARVWFT Trigger: TGTGAACCACACCCTAGCCCACAAGGTCATGTCTAC...AATTTCAGGCATGGTTAAGCTTAAAAGGTCAAAACCACACCTGGAGATGGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162151.3 |
||
| 3UTR CAA 72 bp | TCTCTGGCCATATTGAGCATGACATTAATCTCCTCCTaGGTTTTCATAGTGACAGCGATTTCCGGATGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLAILSMTLISS*VFIVTAISGWS Trigger: TGACCATCCGGAAATCGCTGTCACTATGAAAACCAAGGAGGAGATTAATGTCATGCTCAATATGGCCAGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
||
| CDS-3UTR TCA 90 bp | GTCTATGATTTGCAGCAGTTTTGGTGTTACAAGCTTCAAGATGCGCAGTATACGCCATGGCTTCAATGTTaGGGGTCTCATCTATTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VYDLQQFWCYKLQDAQYTPWLQC*GSHLFP Trigger: AGGAAATAGATGAGACCCTCAACATTGAAGCCATGG...CGTATACTGCGCATCTTGAAGCTTGTAACACCAAAACTGCTGCAAATCATAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162151.3 |
||
| CDS-3UTR TCA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAACTATTATCTCCCCGCTaGGCAGGTACTCTGTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FTLSHKRHINFGLSLSPELLSPR*AGTLCG Trigger: CCCACACAGAGTACCTGCTCAGCGGGGAGATAATAG...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
||
| CDS-3UTR GCA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAAACCAAAGCTTCCAGCTaGGCCTACCAACACCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: FTLSHKRHINFGLSLSPETKASS*AYQHLH Trigger: GTGCAGGTGTTGGTAGGCGCAGCTGGAAGCTTTGGT...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
||
| CDS-3UTR CCA 90 bp | AATGGCTGGATAACAGACTGCAGATCAAGCACCTGGATCTTTTTGGCCATGATTCATCACCAAAGATGGTaGCCATCCATAACTGAATCA | + |
|
Preference number: 4 (lower is better) Translates to: NGWITDCRSSTWIFLAMIHHQRW*PSITES Trigger: TGATTCAGTTATGGATGGCCACCATCTTTGGTGATG...AATCATGGCCAAAAAGATCCAGGTGCTTGATCTGCAGTCTGTTATCCAGCCATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162151.3 |
||
| 3UTR CAA 72 bp | CTTAGGCACATGCTAAGCACTAAAAACATTCTAAGTTaGATACAGCATCATGGCAGAGGAGCTGTTCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: LRHMLSTKNILS*IQHHGRGAVLT Trigger: GGTCAGAACAGCTCCTCTGCCATGATGCTGTATCAAACTTAGAATGTTTTTAGTGCTTAGCATGTGCCTAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162151.3 |
||
| CDS-3UTR GCA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAATACCAACACCTGCACTaGACTCTGGGACAGAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: FTLSHKRHINFGLSLSPEYQHLH*TLGQNL Trigger: GAGGTTCTGTCCCAGAGTGCAGTGCAGGTGTTGGTA...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
||
| CDS-3UTR CCA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAAACCTGCACTGCACTCTaGGACAGAACCTCATTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FTLSHKRHINFGLSLSPETCTAL*DRTSFL Trigger: CAGGAATGAGGTTCTGTCCCAGAGTGCAGTGCAGGT...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
||
| 3UTR CAA 72 bp | ACCTTGTGGGCTAGGGTGTGGTTCACACTCTTTGACTaGAATCTGATATGCACAACACCACTATATATAACT | + |
|
Preference number: 4 (lower is better) Translates to: TLWARVWFTLFD*NLICTTPLYIT Trigger: AGTTATATATAGTGGTGTTGTGCATATCAGATTCAAGTCAAAGAGTGTGAACCACACCCTAGCCCACAAGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162774.7 |
||
| CDS-3UTR TCA 90 bp | TGCAATCTGATCAATTATATTCAGTACATCCATTTCCCCTTGGACATAGCCTTTAAGATAGTATCAGGATaGTTTCAGGGAGGTCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: CNLINYIQYIHFPLDIAFKIVSG*FQGGPG Trigger: CCCAGGACCTCCCTGAAATCATCCTGATACTATCTT...AAAGGCTATGTCCAAGGGGAAATGGATGTACTGAATATAATTGATCAGATTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
||
| CDS-3UTR GCA 90 bp | AATGGCTGGATAACAGACTGCAGATCAAGCACCTGGATCTTTTTGGCCATGATTTTTGTCAAATTTGAGTaGCATGGCTGTAGATTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: NGWITDCRSSTWIFLAMIFVKFE*HGCRFG Trigger: ACCAAATCTACAGCCATGGCACTCAAATTTGACAAA...AATCATGGCCAAAAAGATCCAGGTGCTTGATCTGCAGTCTGTTATCCAGCCATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000162151.3 |
||
| CDS-3UTR CCA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAAGTAGACATGACCTTGTaGGCTAGGGTGTGGTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: FTLSHKRHINFGLSLSPEVDMTL*ARVWFT Trigger: TGTGAACCACACCCTAGCCCACAAGGTCATGTCTAC...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
||
| CDS-3UTR CCA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAATCCTCAGCAGATCCATaGATGAGGACAACGTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: FTLSHKRHINFGLSLSPESSADP*MRTTWV Trigger: AACCCACGTTGTCCTCATCCATGGATCTGCTGAGGA...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
||
| CDS-3UTR TCA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAAAAGATAGTATCAGGATaGTTTCAGGGAGGTCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FTLSHKRHINFGLSLSPEKIVSG*FQGGPG Trigger: CCCAGGACCTCCCTGAAATCATCCTGATACTATCTT...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
||
| CDS-3UTR TCA 90 bp | ATTTGCAGCAGTTTTGGTGTTACAAGCTTCAAGATGCGCAGTATACGAAGGAGTCGATTTATATTTTGTTaGTGTGACATCACGAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: ICSSFGVTSFKMRSIRRSRFIFC*CDITKT Trigger: GGTCTTCGTGATGTCACATCAACAAAATATAAATCG...ACTCCTTCGTATACTGCGCATCTTGAAGCTTGTAACACCAAAACTGCTGCAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162151.3 |
||
| CDS-3UTR TCA 90 bp | ATTCTCTTTCAGAATCTGGTTTCATCGAAATTCTTCGAGGTGGGATGTACTTTCATATATTATCTGTGCTaGCAGGAGACGTCTGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ILFQNLVSSKFFEVGCTFIYYLC*QETSVG Trigger: ACCAACAGACGTCTCCTGTCAGCACAGATAATATAT...GAAAGTACATCCCACCTCGAAGAATTTCGATGAAACCAGATTCTGAAAGAGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162151.3 |
||
| CDS-3UTR GCA 90 bp | AATGGCTGGATAACAGACTGCAGATCAAGCACCTGGATCTTTTTGGCCATGATTGGAAAATCTTTCAGATaGATGTTCAAAAATGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NGWITDCRSSTWIFLAMIGKSFR*MFKNAP Trigger: TGGAGCATTTTTGAACATGCATCTGAAAGATTTTCC...AATCATGGCCAAAAAGATCCAGGTGCTTGATCTGCAGTCTGTTATCCAGCCATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
||
| CDS-3UTR CCA 90 bp | ATTCTCTTTCAGAATCTGGTTTCATCGAAATTCTTCGAGGTGGGATGTACTTTCCATCATCACCAAAGATaGTGGCCATCCATAACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: ILFQNLVSSKFFEVGCTFHHHQR*WPSITE Trigger: TTCAGTTATGGATGGCCACCATCTTTGGTGATGATG...GAAAGTACATCCCACCTCGAAGAATTTCGATGAAACCAGATTCTGAAAGAGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162151.3 |
||
| 3UTR CAA 72 bp | TTGGACCTGAAAGCCTTGACAATTTCTCTGGCCATATaGAGCATGACATTAATCTCCTCCTTGGTTTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: LDLKALTISLAI*SMTLISSLVFI Trigger: TATGAAAACCAAGGAGGAGATTAATGTCATGCTCAATATGGCCAGAGAAATTGTCAAGGCTTTCAGGTCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
||
| 3UTR CAA 72 bp | TGGCTAATGGGAATAAAATATGTCTCCACAACAGTTTaGCAGGTGGCAGAATATTGCATCCGTTCTTTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: WLMGIKYVSTTV*QVAEYCIRSLV Trigger: GACTAAAGAACGGATGCAATATTCTGCCACCTGCAAAACTGTTGTGGAGACATATTTTATTCCCATTAGCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162774.7 |
||
| CDS-3UTR TCA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAACCATGGCTTCAATGTTaGGGGTCTCATCTATTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FTLSHKRHINFGLSLSPEPWLQC*GSHLFP Trigger: AGGAAATAGATGAGACCCTCAACATTGAAGCCATGG...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
||
| CDS-3UTR TCA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAAGTCGAATCACGTTCATaGAGACCACAGTCTCAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: FTLSHKRHINFGLSLSPEVESRS*RPQSQL Trigger: TAACTGAGACTGTGGTCTTCATGAACGTGATTCGAC...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
||
| CDS-3UTR TCA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAAGTGTGGGGCAGTGGATaGATTTTAATCTCTGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: FTLSHKRHINFGLSLSPEVWGSG*ILISDS Trigger: AGAGTCAGAGATTAAAATTCATCCACTGCCCCACAC...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
||
| CDS-3UTR TCA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAATGGGGATGTCTCTTATaGAGGCATTGCAGAGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FTLSHKRHINFGLSLSPEWGCLL*RHCRVS Trigger: TGAAACTCTGCAATGCCTTCATAAGAGACATCCCCA...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
||
| CDS-3UTR CCA 90 bp | TTGACAATTTCTCTGGCCATATTGAGCATGACATTAATCTCCTCCTTGGTTTTCGCATCTGCATATATCTaGATCTGGGTTGATGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LTISLAILSMTLISSLVFASAYI*IWVDAK Trigger: TTTTGCATCAACCCAGATCCAGATATATGCAGATGC...GAAAACCAAGGAGGAGATTAATGTCATGCTCAATATGGCCAGAGAAATTGTCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
||
| CDS-3UTR CCA 90 bp | GTGGCAGAATATTGCATCCGTTCTTTAGTCAGACAGTTTAACTCTCCTATTATCGCATCTGCATATATCTaGATCTGGGTTGATGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: VAEYCIRSLVRQFNSPIIASAYI*IWVDAK Trigger: TTTTGCATCAACCCAGATCCAGATATATGCAGATGC...GATAATAGGAGAGTTAAACTGTCTGACTAAAGAACGGATGCAATATTCTGCCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
||
| 3UTR CAA 72 bp | ATAGAATACCGAAATGATATCTGCTGGCTCATCCTTTaGTCTATGATTTGCAGCAGTTTTGGTGTTACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: IEYRNDICWLIL*SMICSSFGVTS Trigger: GCTTGTAACACCAAAACTGCTGCAAATCATAGACAAAAGGATGAGCCAGCAGATATCATTTCGGTATTCTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
||
| CDS-3UTR GCA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAACAGGTGGCAGAATATTaGATCCGTTCTTTAGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FTLSHKRHINFGLSLSPEQVAEY*IRSLVR Trigger: TCTGACTAAAGAACGGATGCAATATTCTGCCACCTG...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
||
| CDS-3UTR GCA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAATCTCCACAACAGTTTTaGAGGTGGCAGAATATTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FTLSHKRHINFGLSLSPESPQQF*RWQNIA Trigger: TGCAATATTCTGCCACCTGCAAAACTGTTGTGGAGA...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
||
| CDS-3UTR CCA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAAGATCCATCCACTGTATaGCATCTGCATATATCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: FTLSHKRHINFGLSLSPEDPSTV*HLHISG Trigger: TCCAGATATATGCAGATGCCATACAGTGGATGGATC...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
||
| CDS-3UTR CCA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAACATCACCAAAGATGGTaGCCATCCATAACTGAATCA | + |
|
Preference number: 4 (lower is better) Translates to: FTLSHKRHINFGLSLSPEHHQRW*PSITES Trigger: TGATTCAGTTATGGATGGCCACCATCTTTGGTGATG...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
||
| CDS-3UTR CCA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAACATCATCACCAAAGATaGTGGCCATCCATAACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: FTLSHKRHINFGLSLSPEHHHQR*WPSITE Trigger: TTCAGTTATGGATGGCCACCATCTTTGGTGATGATG...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
||
| CDS-3UTR CCA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAATGCAGATCAAGCACCTaGATCTTTTTGGCCATGATT | + |
|
Preference number: 4 (lower is better) Translates to: FTLSHKRHINFGLSLSPECRSST*IFLAMI Trigger: AATCATGGCCAAAAAGATCCAGGTGCTTGATCTGCA...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
||
| CDS-3UTR TCA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAATCAGAAACACACTTTTaGGAAGTTCCAGCCACATAT | + |
|
Preference number: 4 (lower is better) Translates to: FTLSHKRHINFGLSLSPESETHF*EVPATY Trigger: ATATGTGGCTGGAACTTCTCAAAAGTGTGTTTCTGA...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
||
| CDS-3UTR TCA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAAGTGGCCATCCATAACTaGATCACTTTTGTAAATACG | + |
|
Preference number: 4 (lower is better) Translates to: FTLSHKRHINFGLSLSPEVAIHN*ITFVNT Trigger: CGTATTTACAAAAGTGATTCAGTTATGGATGGCCAC...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
||
| CDS-3UTR GCA 90 bp | ATAACAGACTGCAGATCAAGCACCTGGATCTTTTTGGCCATGATTAACTTGTTAATGCATGTTCAAAAATaGTCCAACTGTACAGATCAA | + |
|
Preference number: 4 (lower is better) Translates to: ITDCRSSTWIFLAMINLLMHVQK*SNCTDQ Trigger: TTGATCTGTACAGTTGGAGCATTTTTGAACATGCAT...TAACAAGTTAATCATGGCCAAAAAGATCCAGGTGCTTGATCTGCAGTCTGTTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
||
| CDS-3UTR GCA 90 bp | ATTCTCTTTCAGAATCTGGTTTCATCGAAATTCTTCGAGGTGGGATGTACTTTCATGCATGTTCAAAAATaGTCCAACTGTACAGATCAA | + |
|
Preference number: 4 (lower is better) Translates to: ILFQNLVSSKFFEVGCTFMHVQK*SNCTDQ Trigger: TTGATCTGTACAGTTGGAGCATTTTTGAACATGCAT...GAAAGTACATCCCACCTCGAAGAATTTCGATGAAACCAGATTCTGAAAGAGAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
||
| CDS-3UTR CCA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAAGCATCTGCATATATCTaGATCTGGGTTGATGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: FTLSHKRHINFGLSLSPEASAYI*IWVDAK Trigger: TTTTGCATCAACCCAGATCCAGATATATGCAGATGC...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
||
| CDS-3UTR CCA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAACGAAATGATATCTGCTaGCTCATCCTTTTGTCTATG | + |
|
Preference number: 4 (lower is better) Translates to: FTLSHKRHINFGLSLSPERNDIC*LILLSM Trigger: CATAGACAAAAGGATGAGCCAGCAGATATCATTTCG...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
||
| CDS-3UTR TCA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAACGATTTATATTTTGTTaGTGTGACATCACGAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: FTLSHKRHINFGLSLSPERFIFC*CDITKT Trigger: GGTCTTCGTGATGTCACATCAACAAAATATAAATCG...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
||
| CDS-3UTR GCA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAATTTGTCAAATTTGAGTaGCATGGCTGTAGATTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FTLSHKRHINFGLSLSPEFVKFE*HGCRFG Trigger: ACCAAATCTACAGCCATGGCACTCAAATTTGACAAA...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
||
| CDS-3UTR CCA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAAGATTTGCAGCAGTTTTaGTGTTACAAGCTTCAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: FTLSHKRHINFGLSLSPEDLQQF*CYKLQD Trigger: ATCTTGAAGCTTGTAACACCAAAACTGCTGCAAATC...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
||
| CDS-3UTR CCA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAATTCTTCAACATTAAATaGCTGGATAACAGACTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FTLSHKRHINFGLSLSPEFFNIK*LDNRLQ Trigger: CTGCAGTCTGTTATCCAGCCATTTAATGTTGAAGAA...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
||
| CDS-3UTR CCA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAATACATAGATTCCTTCTaGCTCATCACCTTCTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: FTLSHKRHINFGLSLSPEYIDSF*LITFFK Trigger: TTTGAAGAAGGTGATGAGCCAGAAGGAATCTATGTA...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
||
| CDS-3UTR CCA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAACGAAATTCTTCGAGGTaGGATGTACTTTCTTACATT | + |
|
Preference number: 4 (lower is better) Translates to: FTLSHKRHINFGLSLSPERNSSR*DVLSYI Trigger: AATGTAAGAAAGTACATCCCACCTCGAAGAATTTCG...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
||
| CDS-3UTR GCA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAAATGCATGTTCAAAAATaGTCCAACTGTACAGATCAA | + |
|
Preference number: 4 (lower is better) Translates to: FTLSHKRHINFGLSLSPEMHVQK*SNCTDQ Trigger: TTGATCTGTACAGTTGGAGCATTTTTGAACATGCAT...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
||
| CDS-3UTR GCA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAAGGAAAATCTTTCAGATaGATGTTCAAAAATGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FTLSHKRHINFGLSLSPEGKSFR*MFKNAP Trigger: TGGAGCATTTTTGAACATGCATCTGAAAGATTTTCC...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
||
| CDS-3UTR GCA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAAGACTATTCTATGGCATaGATGAAGAAACATGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: FTLSHKRHINFGLSLSPEDYSMA*MKKHVS Trigger: AGATACATGTTTCTTCATGCATGCCATAGAATAGTC...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
||
| CDS-3UTR GCA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAACTTTTGTCTATGATTTaGAGCAGTTTTGGTGTTACA | + |
|
Preference number: 4 (lower is better) Translates to: FTLSHKRHINFGLSLSPELLSMI*SSFGVT Trigger: TGTAACACCAAAACTGCTGCAAATCATAGACAAAAG...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
||
| CDS-3UTR CCA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAAGTCAGTTTGATACTGTaGGATGCAGTTAAATTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FTLSHKRHINFGLSLSPEVSLIL*DAVKFS Trigger: TGAAAATTTAACTGCATCCCACAGTATCAAACTGAC...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
||
| CDS CCA 90 bp | ACTGTACAGATCAAAGATAGTATCAGGATGATTTCAGGGAGGTCCTaGGGAGTGCTCAGAAACACACTTTTGAGAAGTTCCAGCCACATA | + |
|
Preference number: 5 (lower is better) Translates to: TVQIKDSIRMISGRS*GVLRNTLLRSSSHI Trigger: TATGTGGCTGGAACTTCTCAAAAGTGTGTTTCTGAGCACTCCCCAGGACCTCCCTGAAATCATCCTGATACTATCTTTGATCTGTACAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
||
| CDS-3UTR CAA 90 bp | GGCTTCTTCAACATTAAATGGCTGGATAACAGACTGCAGATCAAGCACCTGGATTCACAGGAAGAGGAATaGGAAAATCTTTCAGATGCA | + |
|
Preference number: 5 (lower is better) Translates to: GFFNIKWLDNRLQIKHLDSQEEE*ENLSDA Trigger: TGCATCTGAAAGATTTTCCAATTCCTCTTCCTGTGA...ATCCAGGTGCTTGATCTGCAGTCTGTTATCCAGCCATTTAATGTTGAAGAAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
||
| CDS-3UTR CAA 90 bp | GGCTTCTTCAACATTAAATGGCTGGATAACAGACTGCAGATCAAGCACCTGGATAGATCTTTGTCAAATTaGAGTGCCATGGCTGTAGAT | + |
|
Preference number: 5 (lower is better) Translates to: GFFNIKWLDNRLQIKHLDRSLSN*SAMAVD Trigger: ATCTACAGCCATGGCACTCAAATTTGACAAAGATCT...ATCCAGGTGCTTGATCTGCAGTCTGTTATCCAGCCATTTAATGTTGAAGAAGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162151.3 |
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| CDS-3UTR CAA 90 bp | GGCTTCTTCAACATTAAATGGCTGGATAACAGACTGCAGATCAAGCACCTGGATGCATTAGCAAGATCTTaGTCAAATTTGAGTGCCATG | + |
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Preference number: 5 (lower is better) Translates to: GFFNIKWLDNRLQIKHLDALARS*SNLSAM Trigger: CATGGCACTCAAATTTGACAAAGATCTTGCTAATGC...ATCCAGGTGCTTGATCTGCAGTCTGTTATCCAGCCATTTAATGTTGAAGAAGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162151.3 |
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| CDS-3UTR CAA 90 bp | CTTTCCATCTCCAGGTGTGGTTTTGACCTTTTAAGCTTAACCATGCCTGAAATTTCCATGGCTTCAATGTaGAGGGTCTCATCTATTTCC | + |
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Preference number: 5 (lower is better) Translates to: LSISRCGFDLLSLTMPEISMASM*RVSSIS Trigger: GGAAATAGATGAGACCCTCAACATTGAAGCCATGGA...AATTTCAGGCATGGTTAAGCTTAAAAGGTCAAAACCACACCTGGAGATGGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162151.3 |
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| CDS-3UTR CAA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAAGTGTTCTCGGATCTTTaGGGCAGTAATGGCAAGTCC | + |
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Preference number: 5 (lower is better) Translates to: FTLSHKRHINFGLSLSPEVFSDL*GSNGKS Trigger: GGACTTGCCATTACTGCCCAAAAGATCCGAGAACAC...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
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| CDS-3UTR CAA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAAGAAGTCTTCCATGCCTaGTATCTGATGGCACGTCAC | + |
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Preference number: 5 (lower is better) Translates to: FTLSHKRHINFGLSLSPEEVFHA*YLMARH Trigger: GTGACGTGCCATCAGATACAAGGCATGGAAGACTTC...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
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| CDS CCA 90 bp | AAGAATATGTCTGGATCCATCCACTGTATGGCATCTGCATATATCTaGATCTGGGTTGATGCAAAACTCAGAATTTCAAAACAGCATCCA | + |
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Preference number: 5 (lower is better) Translates to: KNMSGSIHCMASAYI*IWVDAKLRISKQHP Trigger: TGGATGCTGTTTTGAAATTCTGAGTTTTGCATCAACCCAGATCCAGATATATGCAGATGCCATACAGTGGATGGATCCAGACATATTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000159945.8 ENSMUST00000162151.3 ENSMUST00000162774.7 |
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| CDS-3UTR CAA 90 bp | CTTTCCATCTCCAGGTGTGGTTTTGACCTTTTAAGCTTAACCATGCCTGAAATTTCATCTATTTCCTTGTaGCAATCTGGACATTTCACC | + |
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Preference number: 5 (lower is better) Translates to: LSISRCGFDLLSLTMPEISSISL*QSGHFT Trigger: GGTGAAATGTCCAGATTGCAACAAGGAAATAGATGA...AATTTCAGGCATGGTTAAGCTTAAAAGGTCAAAACCACACCTGGAGATGGAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162151.3 |
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| CDS-3UTR CAA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAAGCAGGTGGCAGAATATaGCATCCGTTCTTTAGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: FTLSHKRHINFGLSLSPEAGGRI*HPFFSQ Trigger: CTGACTAAAGAACGGATGCAATATTCTGCCACCTGC...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
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| CDS-3UTR CAA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAAGTCTCCACAACAGTTTaGCAGGTGGCAGAATATTGC | + |
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Preference number: 5 (lower is better) Translates to: FTLSHKRHINFGLSLSPEVSTTV*QVAEYC Trigger: GCAATATTCTGCCACCTGCAAAACTGTTGTGGAGAC...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
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| CDS-3UTR CAA 90 bp | ACTTGCAATCTGATCAATTATATTCAGTACATCCATTTCCCCTTGGACATAGCCTCACAGGAAGAGGAATaGGAAAATCTTTCAGATGCA | + |
|
Preference number: 5 (lower is better) Translates to: TCNLINYIQYIHFPLDIASQEEE*ENLSDA Trigger: TGCATCTGAAAGATTTTCCAATTCCTCTTCCTGTGA...GGCTATGTCCAAGGGGAAATGGATGTACTGAATATAATTGATCAGATTGCAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000162151.3 ENSMUST00000162774.7 |
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| CDS-3UTR CAA 90 bp | ACTTGCAATCTGATCAATTATATTCAGTACATCCATTTCCCCTTGGACATAGCCGTCTCATCTATTTCCTaGTTGCAATCTGGACATTTC | + |
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Preference number: 5 (lower is better) Translates to: TCNLINYIQYIHFPLDIAVSSIS*LQSGHF Trigger: GAAATGTCCAGATTGCAACAAGGAAATAGATGAGAC...GGCTATGTCCAAGGGGAAATGGATGTACTGAATATAATTGATCAGATTGCAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162151.3 |
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| CDS-3UTR CAA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAATCCATGGCTTCAATGTaGAGGGTCTCATCTATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: FTLSHKRHINFGLSLSPESMASM*RVSSIS Trigger: GGAAATAGATGAGACCCTCAACATTGAAGCCATGGA...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
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| CDS-3UTR CAA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAATGCTGGCTCATCCTTTaGTCTATGATTTGCAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: FTLSHKRHINFGLSLSPECWLIL*SMICSS Trigger: ACTGCTGCAAATCATAGACAAAAGGATGAGCCAGCA...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
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| CDS-3UTR CAA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAATTGGACCTGAAAGCCTaGACAATTTCTCTGGCCATA | + |
|
Preference number: 5 (lower is better) Translates to: FTLSHKRHINFGLSLSPELDLKA*TISLAI Trigger: TATGGCCAGAGAAATTGTCAAGGCTTTCAGGTCCAA...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
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| CDS-3UTR CAA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAATCAGTGCCTTCCACCTaGTGTATAATTCCTTTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: FTLSHKRHINFGLSLSPESVPST*CIIPLD Trigger: GTCCAAAGGAATTATACACAAGGTGGAAGGCACTGA...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
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| CDS-3UTR CAA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAATCTCTTATGAAGGCATaGCAGAGTTTCAACTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FTLSHKRHINFGLSLSPESLMKA*QSFNCS Trigger: GCTGCAGTTGAAACTCTGCAATGCCTTCATAAGAGA...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
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| CDS-3UTR CAA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAACTCAGAAACACACTTTaGAGAAGTTCCAGCCACATA | + |
|
Preference number: 5 (lower is better) Translates to: FTLSHKRHINFGLSLSPELRNTL*RSSSHI Trigger: TATGTGGCTGGAACTTCTCAAAAGTGTGTTTCTGAG...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
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| CDS-3UTR CAA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAAATGAGAGTGATGTGGTaGACATCATCACCAAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: FTLSHKRHINFGLSLSPEMRVMW*TSSPKM Trigger: CATCTTTGGTGATGATGTCAACCACATCACTCTCAT...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
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| CDS-3UTR CAA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAATACATCCATTTCCCCTaGGACATAGCCTTTCAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: FTLSHKRHINFGLSLSPEYIHFP*DIAFQY Trigger: ATACTGAAAGGCTATGTCCAAGGGGAAATGGATGTA...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
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| CDS-3UTR CAA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAAACATTAATCTCCTCCTaGGTTTTCATAGTGACAGCG | + |
|
Preference number: 5 (lower is better) Translates to: FTLSHKRHINFGLSLSPETLISS*VFIVTA Trigger: CGCTGTCACTATGAAAACCAAGGAGGAGATTAATGT...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
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| CDS-3UTR CAA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAATTGGCCATGATTAACTaGTTAATCTCAGTGCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: FTLSHKRHINFGLSLSPELAMIN*LISVPS Trigger: GGAAGGCACTGAGATTAACAAGTTAATCATGGCCAA...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
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| CDS-3UTR CAA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAATCAGTTTTCATGGACTaGGGGATGTCTCTTATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FTLSHKRHINFGLSLSPESVFMD*GMSLMK Trigger: CTTCATAAGAGACATCCCCAAGTCCATGAAAACTGA...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
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| CDS-3UTR CAA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAATCACAGGAAGAGGAATaGGAAAATCTTTCAGATGCA | + |
|
Preference number: 5 (lower is better) Translates to: FTLSHKRHINFGLSLSPESQEEE*ENLSDA Trigger: TGCATCTGAAAGATTTTCCAATTCCTCTTCCTGTGA...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
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| CDS-3UTR CAA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAAAGATCTTTGTCAAATTaGAGTGCCATGGCTGTAGAT | + |
|
Preference number: 5 (lower is better) Translates to: FTLSHKRHINFGLSLSPERSLSN*SAMAVD Trigger: ATCTACAGCCATGGCACTCAAATTTGACAAAGATCT...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
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| CDS-3UTR CAA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAAGCATTAGCAAGATCTTaGTCAAATTTGAGTGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: FTLSHKRHINFGLSLSPEALARS*SNLSAM Trigger: CATGGCACTCAAATTTGACAAAGATCTTGCTAATGC...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
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| CDS-3UTR CAA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAATCATCTATTTCCTTGTaGCAATCTGGACATTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: FTLSHKRHINFGLSLSPESSISL*QSGHFT Trigger: GGTGAAATGTCCAGATTGCAACAAGGAAATAGATGA...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
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| CDS-3UTR CAA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAAGTCTCATCTATTTCCTaGTTGCAATCTGGACATTTC | + |
|
Preference number: 5 (lower is better) Translates to: FTLSHKRHINFGLSLSPEVSSIS*LQSGHF Trigger: GAAATGTCCAGATTGCAACAAGGAAATAGATGAGAC...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
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| CDS-3UTR CAA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAATTGTGTATAATTCCTTaGGACCTGAAAGCCTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: FTLSHKRHINFGLSLSPELCIIP*DLKALT Trigger: TGTCAAGGCTTTCAGGTCCAAAGGAATTATACACAA...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
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| CDS-3UTR CAA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAAAGCACCTGGATCTTTTaGGCCATGATTAACTTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: FTLSHKRHINFGLSLSPESTWIF*AMINLL Trigger: TAACAAGTTAATCATGGCCAAAAAGATCCAGGTGCT...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
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| CDS-3UTR CAA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAATTCTCTTTCTTACCATaGTCCTCTTCAGAGGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: FTLSHKRHINFGLSLSPEFSFLP*SSSEVS Trigger: TGAAACCTCTGAAGAGGACAATGGTAAGAAAGAGAA...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
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| CDS CCA 90 bp | AAGCATGTATATATCCATGTCGAAGGCAACATTAAAGATAATCACTaGTGTGAATATACCAAAGAATATGTCTGGATCCATCCACTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: KHVYIHVEGNIKDNH*CEYTKEYVWIHPLY Trigger: ATACAGTGGATGGATCCAGACATATTCTTTGGTATATTCACACCAGTGATTATCTTTAATGTTGCCTTCGACATGGATATATACATGCTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000159945.8 ENSMUST00000162151.3 ENSMUST00000162774.7 |
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| CDS-3UTR CAA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAAGAAGAAACATGTATCTaGATGGAACCCCTTTATCTT | + |
|
Preference number: 5 (lower is better) Translates to: FTLSHKRHINFGLSLSPEEETCI*MEPLYL Trigger: AAGATAAAGGGGTTCCATCAAGATACATGTTTCTTC...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
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| CDS-3UTR CAA 90 bp | TTCACATTATCACATAAAAGGCACATAAACTTTGGCTTGTCTCTATCTCCAGAAGGCAAGTCCGATTTTTaGCCACATTTTATGTTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: FTLSHKRHINFGLSLSPEGKSDF*PHFMFH Trigger: ATGAAACATAAAATGTGGCAAAAAATCGGACTTGCC...TTCTGGAGATAGAGACAAGCCAAAGTTTATGTGCCTTTTATGTGATAATGTGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
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| CDS CAA 90 bp | AGGATGATTTCAGGGAGGTCCTGGGGAGTGCTCAGAAACACACTTTaGAGAAGTTCCAGCCACATATTAGTCAGTTTGATACTGTGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: RMISGRSWGVLRNTL*RSSSHILVSLILWD Trigger: ATCCCACAGTATCAAACTGACTAATATGTGGCTGGAACTTCTCAAAAGTGTGTTTCTGAGCACTCCCCAGGACCTCCCTGAAATCATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
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| CDS CAA 72 bp | TCAGGGAGGTCCTGGGGAGTGCTCAGAAACACACTTTaGAGAAGTTCCAGCCACATATTAGTCAGTTTGATA | + |
|
Preference number: 6 (lower is better) Translates to: SGRSWGVLRNTL*RSSSHILVSLI Trigger: TATCAAACTGACTAATATGTGGCTGGAACTTCTCAAAAGTGTGTTTCTGAGCACTCCCCAGGACCTCCCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
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| CDS CCA 72 bp | ATCAAAGATAGTATCAGGATGATTTCAGGGAGGTCCTaGGGAGTGCTCAGAAACACACTTTTGAGAAGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: IKDSIRMISGRS*GVLRNTLLRSS Trigger: GGAACTTCTCAAAAGTGTGTTTCTGAGCACTCCCCAGGACCTCCCTGAAATCATCCTGATACTATCTTTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159945.8 |
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| CDS CCA 72 bp | TCCATCCACTGTATGGCATCTGCATATATCTGGATCTaGGTTGATGCAAAACTCAGAATTTCAAAACAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: SIHCMASAYIWI*VDAKLRISKQH Trigger: ATGCTGTTTTGAAATTCTGAGTTTTGCATCAACCCAGATCCAGATATATGCAGATGCCATACAGTGGATGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000159945.8 ENSMUST00000162151.3 ENSMUST00000162774.7 |
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| CDS CCA 72 bp | TCTGGATCCATCCACTGTATGGCATCTGCATATATCTaGATCTGGGTTGATGCAAAACTCAGAATTTCAAAA | + |
|
Preference number: 6 (lower is better) Translates to: SGSIHCMASAYI*IWVDAKLRISK Trigger: TTTTGAAATTCTGAGTTTTGCATCAACCCAGATCCAGATATATGCAGATGCCATACAGTGGATGGATCCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000159945.8 ENSMUST00000162151.3 ENSMUST00000162774.7 |
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| CDS CCA 72 bp | ATATACCAAAGAATATGTCTGGATCCATCCACTGTATaGCATCTGCATATATCTGGATCTGGGTTGATGCAA | + |
|
Preference number: 6 (lower is better) Translates to: IYQRICLDPSTV*HLHISGSGLMQ Trigger: TTGCATCAACCCAGATCCAGATATATGCAGATGCCATACAGTGGATGGATCCAGACATATTCTTTGGTATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000159945.8 ENSMUST00000162151.3 ENSMUST00000162774.7 |
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| CDS CAA 72 bp | TCCACTGTATGGCATCTGCATATATCTGGATCTGGGTaGATGCAAAACTCAGAATTTCAAAACAGCATCCAA | + |
|
Preference number: 6 (lower is better) Translates to: STVWHLHISGSG*MQNSEFQNSIQ Trigger: TTGGATGCTGTTTTGAAATTCTGAGTTTTGCATCAACCCAGATCCAGATATATGCAGATGCCATACAGTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000159945.8 ENSMUST00000162151.3 ENSMUST00000162774.7 |
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| CDS CCA 72 bp | TATATCCATGTCGAAGGCAACATTAAAGATAATCACTaGTGTGAATATACCAAAGAATATGTCTGGATCCAT | + |
|
Preference number: 6 (lower is better) Translates to: YIHVEGNIKDNH*CEYTKEYVWIH Trigger: ATGGATCCAGACATATTCTTTGGTATATTCACACCAGTGATTATCTTTAATGTTGCCTTCGACATGGATATA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000159945.8 ENSMUST00000162151.3 ENSMUST00000162774.7 |
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