Pregenerated sensors for SLC9B2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037994Ensembl transcript IDs: ENSMUST00000051849.10, ENSMUST00000145195.8, ENSMUST00000149655.6
Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGTGCCTATTGCTCAGCCCAGGCCAGGGTCTCTGGAGAGCAGAACTaGGCAGTAGGAGTCTGTGTCTGTTTAATCCTGTGGCTGCACTTT | + |
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Preference number: 1 (lower is better) Translates to: CAYCSAQARVSGEQN*AVGVCVCLILWLHF Trigger: AAAGTGCAGCCACAGGATTAAACAGACACAGACTCCTACTGCTCAGTTCTGCTCTCCAGAGACCCTGGCCTGGGCTGAGCAATAGGCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| 3UTR GCA 90 bp | AAGCACTGCGATGCTGAGGGTTGCAACACAAAGGCCAACCGTTTCTaGTCTGAGAGACACAATGGAAACCTCTGCTCCAATCAGGCCAAA | + |
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Preference number: 1 (lower is better) Translates to: KHCDAEGCNTKANRF*SERHNGNLCSNQAK Trigger: TTTGGCCTGATTGGAGCAGAGGTTTCCATTGTGTCTCTCAGAGCAGAAACGGTTGGCCTTTGTGTTGCAACCCTCAGCATCGCAGTGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145195.8 |
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| 3UTR GCA 90 bp | ACAAAGGCCAACCGTTTCTGCTCTGAGAGACACAATGGAAACCTCTaGTCCAATCAGGCCAAAAAGAAGAGGCTGGAAAACGTCCCAGGT | + |
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Preference number: 1 (lower is better) Translates to: TKANRFCSERHNGNL*SNQAKKKRLENVPG Trigger: ACCTGGGACGTTTTCCAGCCTCTTCTTTTTGGCCTGATTGGAGCAGAGGTTTCCATTGTGTCTCTCAGAGCAGAAACGGTTGGCCTTTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145195.8 |
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| 3UTR CCA 90 bp | TGTTCATTGCATATGTGCCTATTGCTCAGCCCAGGCCAGGGTCTCTaGAGAGCAGAACTGAGCAGTAGGAGTCTGTGTCTGTTTAATCCT | + |
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Preference number: 1 (lower is better) Translates to: CSLHMCLLLSPGQGL*RAELSSRSLCLFNP Trigger: AGGATTAAACAGACACAGACTCCTACTGCTCAGTTCTGCTCTCCAGAGACCCTGGCCTGGGCTGAGCAATAGGCACATATGCAATGAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| 3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTGTATGTGTGTGTATGTACATTGGCCTGTaGCCTGCACCATTACTTTTCCTCTTCTGGTCCCTCCTACTCCCT | + |
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Preference number: 1 (lower is better) Translates to: VCVCVCVCVCMYIGL*PAPLLFLFWSLLLP Trigger: AGGGAGTAGGAGGGACCAGAAGAGGAAAAGTAATGGTGCAGGTCACAGGCCAATGTACATACACACACATACACACACACACACACACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| 3UTR GCA 90 bp | CAGGAATGTAGTCAGAATTCGTATAAGCACTGCGATGCTGAGGGTTaGAACACAAAGGCCAACCGTTTCTGCTCTGAGAGACACAATGGA | + |
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Preference number: 1 (lower is better) Translates to: QECSQNSYKHCDAEG*NTKANRFCSERHNG Trigger: TCCATTGTGTCTCTCAGAGCAGAAACGGTTGGCCTTTGTGTTGCAACCCTCAGCATCGCAGTGCTTATACGAATTCTGACTACATTCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145195.8 |
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| 3UTR GCA 90 bp | AGCGAAACACACCATCAGGAATGTAGTCAGAATTCGTATAAGCACTaGGATGCTGAGGGTTGCAACACAAAGGCCAACCGTTTCTGCTCT | + |
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Preference number: 1 (lower is better) Translates to: SETHHQECSQNSYKH*DAEGCNTKANRFCS Trigger: AGAGCAGAAACGGTTGGCCTTTGTGTTGCAACCCTCAGCATCGCAGTGCTTATACGAATTCTGACTACATTCCTGATGGTGTGTTTCGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145195.8 |
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| 3UTR CCA 90 bp | TATGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTATGTACATTaGCCTGTGACCTGCACCATTACTTTTCCTCTTCTGGTCCCTCCT | + |
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Preference number: 1 (lower is better) Translates to: YVCVCVCVCMCVYVH*PVTCTITFPLLVPP Trigger: AGGAGGGACCAGAAGAGGAAAAGTAATGGTGCAGGTCACAGGCCAATGTACATACACACACATACACACACACACACACACACACACATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| 3UTR CCA 90 bp | AAGAGACATATTTTGTCTCCTAGAGACATAATATGTCTCTTAGGATaGGCTCTTGCTAAGTGGGCCAGACAGGTCCTGGGCTGGAGAACA | + |
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Preference number: 1 (lower is better) Translates to: KRHILSPRDIICLLG*ALAKWARQVLGWRT Trigger: TGTTCTCCAGCCCAGGACCTGTCTGGCCCACTTAGCAAGAGCCCATCCTAAGAGACATATTATGTCTCTAGGAGACAAAATATGTCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| 3UTR TCA 90 bp | CCACCTCAGCCTCCTGAACATGTGTGCATTGTTACTCCTGCCTTATaGAATGCTGATGGGTGTCCAGCATCAATATTTGATAAATTGACC | + |
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Preference number: 1 (lower is better) Translates to: PPQPPEHVCIVTPAL*NADGCPASIFDKLT Trigger: GGTCAATTTATCAAATATTGATGCTGGACACCCATCAGCATTTCATAAGGCAGGAGTAACAATGCACACATGTTCAGGAGGCTGAGGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| 3UTR TCA 90 bp | AGTCTGGTCTACGTAACAAATTCCAGGCCAGCCAGAGCTATAAAATaGGGCTCTGCCAATACATACATACATGCATACTATAATCTCAGC | + |
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Preference number: 1 (lower is better) Translates to: SLVYVTNSRPARAIK*GSANTYIHAYYNLS Trigger: GCTGAGATTATAGTATGCATGTATGTATGTATTGGCAGAGCCTCATTTTATAGCTCTGGCTGGCCTGGAATTTGTTACGTAGACCAGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| 3UTR GCA 90 bp | AATAAATTAGAATGGGAACTCTGTGTCAGACACATCATATATGAGTaGATAGAAACACTGATCACCTCCAGCTATTTTAACAAACCAAAG | + |
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Preference number: 1 (lower is better) Translates to: NKLEWELCVRHIIYE*IETLITSSYFNKPK Trigger: CTTTGGTTTGTTAAAATAGCTGGAGGTGATCAGTGTTTCTATGCACTCATATATGATGTGTCTGACACAGAGTTCCCATTCTAATTTATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| 3UTR-3UTR CCA 90 bp | CAGGAAGCAGAGGCCAGGGATCTCTGTGACTTACCAGCCAGTCTGGTCTACGTATGGGCTCTTGCTAAGTaGGCCAGACAGGTCCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: QEAEARDLCDLPASLVYVWALAK*ARQVLG Trigger: GCCCAGGACCTGTCTGGCCCACTTAGCAAGAGCCCA...TACGTAGACCAGACTGGCTGGTAAGTCACAGAGATCCCTGGCCTCTGCTTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| 3UTR-3UTR GCA 90 bp | CAGGAAGCAGAGGCCAGGGATCTCTGTGACTTACCAGCCAGTCTGGTCTACGTATTCTTCACCTCTCCCTaGTCACATATGCACCACTGG | + |
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Preference number: 2 (lower is better) Translates to: QEAEARDLCDLPASLVYVFFTSP*SHMHHW Trigger: CCAGTGGTGCATATGTGAGCAGGGAGAGGTGAAGAA...TACGTAGACCAGACTGGCTGGTAAGTCACAGAGATCCCTGGCCTCTGCTTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| 3UTR-3UTR CCA 90 bp | CAGGAAGCAGAGGCCAGGGATCTCTGTGACTTACCAGCCAGTCTGGTCTACGTAATATGTCTCTTAGGATaGGCTCTTGCTAAGTGGGCC | + |
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Preference number: 2 (lower is better) Translates to: QEAEARDLCDLPASLVYVICLLG*ALAKWA Trigger: GGCCCACTTAGCAAGAGCCCATCCTAAGAGACATAT...TACGTAGACCAGACTGGCTGGTAAGTCACAGAGATCCCTGGCCTCTGCTTCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| 3UTR-3UTR TCA 90 bp | CTTCGGTTCGATGTTCAGATTTCTGAAGAACCCTGGGACCCAGCAAACCAATCACTGCTAGGAAAGCCATaGCCAACGTGCAGAGTCCTC | + |
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Preference number: 2 (lower is better) Translates to: LRFDVQISEEPWDPANQSLLGKP*PTCRVL Trigger: GAGGACTCTGCACGTTGGTCATGGCTTTCCTAGCAG...TGATTGGTTTGCTGGGTCCCAGGGTTCTTCAGAAATCTGAACATCGAACCGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145195.8 |
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| 3UTR-3UTR CCA 90 bp | CTTCGGTTCGATGTTCAGATTTCTGAAGAACCCTGGGACCCAGCAAACCAATCAAGCTGCTTCTCTCCGTaGGATCTTGCCGTGTCCAGA | + |
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Preference number: 2 (lower is better) Translates to: LRFDVQISEEPWDPANQSSCFSP*DLAVSR Trigger: TCTGGACACGGCAAGATCCCACGGAGAGAAGCAGCT...TGATTGGTTTGCTGGGTCCCAGGGTTCTTCAGAAATCTGAACATCGAACCGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145195.8 |
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| 3UTR-3UTR TCA 90 bp | AAACATGGTCCATCAGGCTTCCGTAATGGAATCCTCAGGCTTCCTCTGAATGTGGCAGAAGTCTCTCCTTaGACCTCCTCTTCGGTTCGA | + |
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Preference number: 2 (lower is better) Translates to: KHGPSGFRNGILRLPLNVAEVSP*TSSSVR Trigger: TCGAACCGAAGAGGAGGTTCAAGGAGAGACTTCTGC...CACATTCAGAGGAAGCCTGAGGATTCCATTACGGAAGCCTGATGGACCATGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145195.8 |
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| 3UTR-3UTR CCA 90 bp | TGCTGTCCAGTGTATATATCACACATATCGGATGATTTGTGGCCTCTTGAGGACCCAGGCCAGGGTCTCTaGAGAGCAGAACTGAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: CCPVYISHISDDLWPLEDPGQGL*RAELSS Trigger: ACTGCTCAGTTCTGCTCTCCAGAGACCCTGGCCTGG...GTCCTCAAGAGGCCACAAATCATCCGATATGTGTGATATATACACTGGACAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| 3UTR-3UTR CCA 90 bp | TGCTGTCCAGTGTATATATCACACATATCGGATGATTTGTGGCCTCTTGAGGACTCCGCTACTACCACCTaGTTCTTCACCTCTCCCTGC | + |
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Preference number: 2 (lower is better) Translates to: CCPVYISHISDDLWPLEDSATTT*FFTSPC Trigger: GCAGGGAGAGGTGAAGAACCAGGTGGTAGTAGCGGA...GTCCTCAAGAGGCCACAAATCATCCGATATGTGTGATATATACACTGGACAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| 3UTR CAA 90 bp | GTATGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTATGTACATaGGCCTGTGACCTGCACCATTACTTTTCCTCTTCTGGTCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: VCVCVCVCVYVCVCT*ACDLHHYFSSSGPS Trigger: GGAGGGACCAGAAGAGGAAAAGTAATGGTGCAGGTCACAGGCCAATGTACATACACACACATACACACACACACACACACACACACATAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| 3UTR-3UTR CCA 90 bp | AGCTCAAGTTCTTTGAACAGGCACAATGCTGTCCAGTGTATATATCACACATATAGACAGGTCCTGGGCTaGAGAACACGTGCCACCCTC | + |
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Preference number: 2 (lower is better) Translates to: SSSSLNRHNAVQCIYHTYRQVLG*RTRATL Trigger: GAGGGTGGCACGTGTTCTCCAGCCCAGGACCTGTCT...ATATGTGTGATATATACACTGGACAGCATTGTGCCTGTTCAAAGAACTTGAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| 3UTR CAA 90 bp | AATGGAATCCTCAGGCTTCCTCTGAATGTGTGCAGAAGTCTCTCCTaGAACCTCCTCTTCGGTTCGATGTTCAGATTTCTGAAGAACCCT | + |
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Preference number: 2 (lower is better) Translates to: NGILRLPLNVCRSLS*NLLFGSMFRFLKNP Trigger: AGGGTTCTTCAGAAATCTGAACATCGAACCGAAGAGGAGGTTCAAGGAGAGACTTCTGCACACATTCAGAGGAAGCCTGAGGATTCCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145195.8 |
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| 3UTR-3UTR GCA 90 bp | GGTAAACATGGTCCATCAGGCTTCCGTAATGGAATCCTCAGGCTTCCTCTGAATAAGAAAAGATCCAGCTaGCACACCAATTACCACCTC | + |
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Preference number: 2 (lower is better) Translates to: GKHGPSGFRNGILRLPLNKKRSS*HTNYHL Trigger: GAGGTGGTAATTGGTGTGGCAGCTGGATCTTTTCTT...ATTCAGAGGAAGCCTGAGGATTCCATTACGGAAGCCTGATGGACCATGTTTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145195.8 |
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| 3UTR-3UTR GCA 90 bp | TGTAGTCAGAATTCGTATAAGCACTGCGATGCTGAGGGTTGCAACACAAAGGCCCACAATGGAAACCTCTaGTCCAATCAGGCCAAAAAG | + |
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Preference number: 2 (lower is better) Translates to: CSQNSYKHCDAEGCNTKAHNGNL*SNQAKK Trigger: CTTTTTGGCCTGATTGGAGCAGAGGTTTCCATTGTG...GGCCTTTGTGTTGCAACCCTCAGCATCGCAGTGCTTATACGAATTCTGACTACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145195.8 |
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| 3UTR-3UTR CCA 90 bp | TGCTGTCCAGTGTATATATCACACATATCGGATGATTTGTGGCCTCTTGAGGACTTACTTTTCCTCTTCTaGTCCCTCCTACTCCCTTCC | + |
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Preference number: 2 (lower is better) Translates to: CCPVYISHISDDLWPLEDLLFLF*SLLLPS Trigger: GGAAGGGAGTAGGAGGGACCAGAAGAGGAAAAGTAA...GTCCTCAAGAGGCCACAAATCATCCGATATGTGTGATATATACACTGGACAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| 3UTR-3UTR TCA 90 bp | AGCTCAAGTTCTTTGAACAGGCACAATGCTGTCCAGTGTATATATCACACATATATCCCAGGCTGTCTTTaGCTGTGTCCATCTGAAGGC | + |
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Preference number: 2 (lower is better) Translates to: SSSSLNRHNAVQCIYHTYIPGCL*LCPSEG Trigger: GCCTTCAGATGGACACAGTCAAAGACAGCCTGGGAT...ATATGTGTGATATATACACTGGACAGCATTGTGCCTGTTCAAAGAACTTGAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| 3UTR-3UTR GCA 90 bp | TCAACTTGCTCTCAAAATGGCCACATCATTTGGCATCACATCAGCATGAGGGTGTCTGTAAAAAGCCATTaGCTACCTAATGGGACACAC | + |
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Preference number: 2 (lower is better) Translates to: STCSQNGHIIWHHISMRVSVKSH*LPNGTH Trigger: GTGTGTCCCATTAGGTAGGCAATGGCTTTTTACAGA...CACCCTCATGCTGATGTGATGCCAAATGATGTGGCCATTTTGAGAGCAAGTTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| 3UTR CAA 90 bp | TTTAACTCGTTTATCCAGTCTTTAGAAAAACCCTTTGTATGTTCATaGCATATGTGCCTATTGCTCAGCCCAGGCCAGGGTCTCTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: FNSFIQSLEKPFVCS*HMCLLLSPGQGLWR Trigger: TCTCCAGAGACCCTGGCCTGGGCTGAGCAATAGGCACATATGCAATGAACATACAAAGGGTTTTTCTAAAGACTGGATAAACGAGTTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| 3UTR-3UTR TCA 90 bp | TGCTGTCCAGTGTATATATCACACATATCGGATGATTTGTGGCCTCTTGAGGACTTGACTGTGTCCATCTaGAGGCTATTTTTCTGTCTC | + |
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Preference number: 2 (lower is better) Translates to: CCPVYISHISDDLWPLEDLTVSI*RLFFCL Trigger: GAGACAGAAAAATAGCCTTCAGATGGACACAGTCAA...GTCCTCAAGAGGCCACAAATCATCCGATATGTGTGATATATACACTGGACAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| 3UTR-3UTR TCA 90 bp | TCAACTTGCTCTCAAAATGGCCACATCATTTGGCATCACATCAGCATGAGGGTGCAGACACATCATATATaGGTGCATAGAAACACTGAT | + |
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Preference number: 2 (lower is better) Translates to: STCSQNGHIIWHHISMRVQTHHI*VHRNTD Trigger: ATCAGTGTTTCTATGCACTCATATATGATGTGTCTG...CACCCTCATGCTGATGTGATGCCAAATGATGTGGCCATTTTGAGAGCAAGTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| 3UTR-3UTR TCA 90 bp | AGCTCAAGTTCTTTGAACAGGCACAATGCTGTCCAGTGTATATATCACACATATGTTACTCCTGCCTTATaGAATGCTGATGGGTGTCCA | + |
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Preference number: 2 (lower is better) Translates to: SSSSLNRHNAVQCIYHTYVTPAL*NADGCP Trigger: TGGACACCCATCAGCATTTCATAAGGCAGGAGTAAC...ATATGTGTGATATATACACTGGACAGCATTGTGCCTGTTCAAAGAACTTGAGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| 3UTR-3UTR TCA 90 bp | AGCTCAAGTTCTTTGAACAGGCACAATGCTGTCCAGTGTATATATCACACATATTGCCTTATGAAATGCTaGTGGGTGTCCAGCATCAAT | + |
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Preference number: 2 (lower is better) Translates to: SSSSLNRHNAVQCIYHTYCLMKC*WVSSIN Trigger: ATTGATGCTGGACACCCATCAGCATTTCATAAGGCA...ATATGTGTGATATATACACTGGACAGCATTGTGCCTGTTCAAAGAACTTGAGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| 3UTR-3UTR GCA 90 bp | TGCTGTCCAGTGTATATATCACACATATCGGATGATTTGTGGCCTCTTGAGGACCCTTTGTATGTTCATTaGATATGTGCCTATTGCTCA | + |
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Preference number: 2 (lower is better) Translates to: CCPVYISHISDDLWPLEDPLYVH*ICAYCS Trigger: TGAGCAATAGGCACATATGCAATGAACATACAAAGG...GTCCTCAAGAGGCCACAAATCATCCGATATGTGTGATATATACACTGGACAGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| 3UTR CAA 90 bp | GTAAAAAGCCATTGCCTACCTAATGGGACACACGCTTCTCCTGTGTaGTCTTCTTTGTTCTGGTTTACATTTATGTTTATCCTAAGAGAC | + |
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Preference number: 2 (lower is better) Translates to: VKSHCLPNGTHASPV*SSLFWFTFMFILRD Trigger: GTCTCTTAGGATAAACATAAATGTAAACCAGAACAAAGAAGACAACACAGGAGAAGCGTGTGTCCCATTAGGTAGGCAATGGCTTTTTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| 3UTR CAA 90 bp | GCCAATACATACATACATGCATACTATAATCTCAGCTCAAGTTCTTaGAACAGGCACAATGCTGTCCAGTGTATATATCACACATATCGG | + |
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Preference number: 2 (lower is better) Translates to: ANTYIHAYYNLSSSS*NRHNAVQCIYHTYR Trigger: CCGATATGTGTGATATATACACTGGACAGCATTGTGCCTGTTCAAAGAACTTGAGCTGAGATTATAGTATGCATGTATGTATGTATTGGC 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| 3UTR-3UTR CCA 90 bp | TATAATCTCAGCTCAAGTTCTTTGAACAGGCACAATGCTGTCCAGTGTATATATGTCTGTTTAATCCTGTaGCTGCACTTTTGGTTTGTC | + |
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Preference number: 2 (lower is better) Translates to: YNLSSSSLNRHNAVQCIYVCLIL*LHFWFV Trigger: GACAAACCAAAAGTGCAGCCACAGGATTAAACAGAC...ATATATACACTGGACAGCATTGTGCCTGTTCAAAGAACTTGAGCTGAGATTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| 3UTR CAA 90 bp | CATTGCCTACCTAATGGGACACACGCTTCTCCTGTGTTGTCTTCTTaGTTCTGGTTTACATTTATGTTTATCCTAAGAGACATATTTTGT | + |
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Preference number: 2 (lower is better) Translates to: HCLPNGTHASPVLSS*FWFTFMFILRDIFC Trigger: ACAAAATATGTCTCTTAGGATAAACATAAATGTAAACCAGAACAAAGAAGACAACACAGGAGAAGCGTGTGTCCCATTAGGTAGGCAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| 3UTR-3UTR TCA 90 bp | TATAATCTCAGCTCAAGTTCTTTGAACAGGCACAATGCTGTCCAGTGTATATATCAATATTTGATAAATTaGCCTCTCTCCACTGAGGTA | + |
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Preference number: 2 (lower is better) Translates to: YNLSSSSLNRHNAVQCIYQYLIN*PLSTEV Trigger: TACCTCAGTGGAGAGAGGTCAATTTATCAAATATTG...ATATATACACTGGACAGCATTGTGCCTGTTCAAAGAACTTGAGCTGAGATTATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| 3UTR-3UTR CCA 90 bp | AGCTCAAGTTCTTTGAACAGGCACAATGCTGTCCAGTGTATATATCACACATATTTTACCATTTACAAGTaGTTTAGATTCTGCCCATTC | + |
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Preference number: 2 (lower is better) Translates to: SSSSLNRHNAVQCIYHTYFTIYK*FRFCPF Trigger: GAATGGGCAGAATCTAAACCACTTGTAAATGGTAAA...ATATGTGTGATATATACACTGGACAGCATTGTGCCTGTTCAAAGAACTTGAGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| 3UTR CCA 72 bp | TGGGCTCTTGCTAAGTGGGCCAGACAGGTCCTGGGCTaGAGAACACGTGCCACCCTCCACCTCAGCCTCCTG | + |
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Preference number: 3 (lower is better) Translates to: WALAKWARQVLG*RTRATLHLSLL Trigger: CAGGAGGCTGAGGTGGAGGGTGGCACGTGTTCTCCAGCCCAGGACCTGTCTGGCCCACTTAGCAAGAGCCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| 3UTR CCA 72 bp | CGTGGGATCTTGCCGTGTCCAGAGCCACAGAGCCAATaGCAGCCTGGACCGTGGCCTTTGGAAGCCAGGCAA | + |
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Preference number: 3 (lower is better) Translates to: RGILPCPEPQSQ*QPGPWPLEARQ Trigger: TTGCCTGGCTTCCAAAGGCCACGGTCCAGGCTGCCATTGGCTCTGTGGCTCTGGACACGGCAAGATCCCACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145195.8 |
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| 3UTR-3UTR CAA 90 bp | CACAGAGCCAATGGCAGCCTGGACCGTGGCCTTTGGAAGCCAGGCAAAAGAAATCGCTTCCACACGAGGTaGTCCTGGTCCCTGCTCGGG | + |
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Preference number: 3 (lower is better) Translates to: HRANGSLDRGLWKPGKRNRFHTR*SWSLLG Trigger: CCCGAGCAGGGACCAGGACAACCTCGTGTGGAAGCG...ATTTCTTTTGCCTGGCTTCCAAAGGCCACGGTCCAGGCTGCCATTGGCTCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145195.8 |
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| 3UTR GCA 72 bp | CTACCACCTGGTTCTTCACCTCTCCCTGCTCACATATaGACCACTGGACTCCACTCTACGCCACCAGGCAGA | + |
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Preference number: 3 (lower is better) Translates to: LPPGSSPLPAHI*TTGLHSTPPGR Trigger: TCTGCCTGGTGGCGTAGAGTGGAGTCCAGTGGTGCATATGTGAGCAGGGAGAGGTGAAGAACCAGGTGGTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| 3UTR CCA 72 bp | CATATGTGCCTATTGCTCAGCCCAGGCCAGGGTCTCTaGAGAGCAGAACTGAGCAGTAGGAGTCTGTGTCTG | + |
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Preference number: 3 (lower is better) Translates to: HMCLLLSPGQGL*RAELSSRSLCL Trigger: CAGACACAGACTCCTACTGCTCAGTTCTGCTCTCCAGAGACCCTGGCCTGGGCTGAGCAATAGGCACATATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| 3UTR TCA 72 bp | TCCCTCTCCCTTTCCCCTAAGGACTGGATTCACACATaGTGTCCAGCATTCTCCCAGCTAAGCTGCATCCCC | + |
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Preference number: 3 (lower is better) Translates to: SLSLSPKDWIHT*CPAFSQLSCIP Trigger: GGGGATGCAGCTTAGCTGGGAGAATGCTGGACATCATGTGTGAATCCAGTCCTTAGGGGAAAGGGAGAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| 3UTR-3UTR CAA 90 bp | CAGGAAGCAGAGGCCAGGGATCTCTGTGACTTACCAGCCAGTCTGGTCTACGTAGTGTGTGTATGTACATaGGCCTGTGACCTGCACCAT | + |
|
Preference number: 3 (lower is better) Translates to: QEAEARDLCDLPASLVYVVCVCT*ACDLHH Trigger: ATGGTGCAGGTCACAGGCCAATGTACATACACACAC...TACGTAGACCAGACTGGCTGGTAAGTCACAGAGATCCCTGGCCTCTGCTTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
||
| 3UTR-3UTR CAA 90 bp | CACAGAGCCAATGGCAGCCTGGACCGTGGCCTTTGGAAGCCAGGCAAAAGAAATTCTACCTCTGACTTCTaGTCAGTCCACCTCATGCCT | + |
|
Preference number: 3 (lower is better) Translates to: HRANGSLDRGLWKPGKRNSTSDF*SVHLMP Trigger: AGGCATGAGGTGGACTGACAAGAAGTCAGAGGTAGA...ATTTCTTTTGCCTGGCTTCCAAAGGCCACGGTCCAGGCTGCCATTGGCTCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145195.8 |
||
| 3UTR TCA 72 bp | GCTGGAGAACACGTGCCACCCTCCACCTCAGCCTCCTaGACATGTGTGCATTGTTACTCCTGCCTTATGAAA | + |
|
Preference number: 3 (lower is better) Translates to: AGEHVPPSTSAS*TCVHCYSCLMK Trigger: TTTCATAAGGCAGGAGTAACAATGCACACATGTTCAGGAGGCTGAGGTGGAGGGTGGCACGTGTTCTCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
||
| 3UTR-3UTR CAA 90 bp | CACCTCCAAGATGCCTCTGAAGATGTTAAAAACTGTAGATCCTGTGGAAAAGGCACGCCTAAGCACGTGTaGAAGCCAGTGATGGCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: HLQDASEDVKNCRSCGKGTPKHV*KPVMAR Trigger: CCTGGCCATCACTGGCTTCAACACGTGCTTAGGCGT...GCCTTTTCCACAGGATCTACAGTTTTTAACATCTTCAGAGGCATCTTGGAGGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145195.8 |
||
| 3UTR GCA 72 bp | GCTTCCAATTGGTGCTGTAATGAGGATGGCCAAAAATaGCACCGTCAGCACATCCATCCCATAGTCTTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: ASNWCCNEDGQK*HRQHIHPIVFQ Trigger: CTGGAAGACTATGGGATGGATGTGCTGACGGTGGCATTTTTGGCCATCCTCATTACAGCACCAATTGGAAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145195.8 |
||
| 3UTR GCA 72 bp | AGTCAGAATTCGTATAAGCACTGCGATGCTGAGGGTTaGAACACAAAGGCCAACCGTTTCTGCTCTGAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: SQNSYKHCDAEG*NTKANRFCSER Trigger: TCTCTCAGAGCAGAAACGGTTGGCCTTTGTGTTGCAACCCTCAGCATCGCAGTGCTTATACGAATTCTGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145195.8 |
||
| 3UTR GCA 72 bp | CACCATCAGGAATGTAGTCAGAATTCGTATAAGCACTaGGATGCTGAGGGTTGCAACACAAAGGCCAACCGT | + |
|
Preference number: 3 (lower is better) Translates to: HHQECSQNSYKH*DAEGCNTKANR Trigger: ACGGTTGGCCTTTGTGTTGCAACCCTCAGCATCGCAGTGCTTATACGAATTCTGACTACATTCCTGATGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145195.8 |
||
| 3UTR CCA 72 bp | ATTTTGTCTCCTAGAGACATAATATGTCTCTTAGGATaGGCTCTTGCTAAGTGGGCCAGACAGGTCCTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: ILSPRDIICLLG*ALAKWARQVLG Trigger: GCCCAGGACCTGTCTGGCCCACTTAGCAAGAGCCCATCCTAAGAGACATATTATGTCTCTAGGAGACAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
||
| 3UTR CCA 72 bp | CCTCTTCGGTTCGATGTTCAGATTTCTGAAGAACCCTaGGACCCAGCAAACCAATCAGTAGGCTTCCAATTG | + |
|
Preference number: 3 (lower is better) Translates to: PLRFDVQISEEP*DPANQSVGFQL Trigger: CAATTGGAAGCCTACTGATTGGTTTGCTGGGTCCCAGGGTTCTTCAGAAATCTGAACATCGAACCGAAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145195.8 |
||
| 3UTR TCA 72 bp | TGTGTGTGTGTATGTGTGTGTATGTACATTGGCCTGTaGCCTGCACCATTACTTTTCCTCTTCTGGTCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: CVCVCVCMYIGL*PAPLLFLFWSL Trigger: GAGGGACCAGAAGAGGAAAAGTAATGGTGCAGGTCACAGGCCAATGTACATACACACACATACACACACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
||
| 3UTR TCA 72 bp | CATCATTTGGCATCACATCAGCATGAGGGTGCCTGTTaGCCACATCCTTGCCGAGTTTACCATTTACAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: HHLASHQHEGAC*PHPCRVYHLQV Trigger: CACTTGTAAATGGTAAACTCGGCAAGGATGTGGTCAACAGGCACCCTCATGCTGATGTGATGCCAAATGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
||
| 3UTR GCA 72 bp | AACCGTTTCTGCTCTGAGAGACACAATGGAAACCTCTaGTCCAATCAGGCCAAAAAGAAGAGGCTGGAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: NRFCSERHNGNL*SNQAKKKRLEN Trigger: GTTTTCCAGCCTCTTCTTTTTGGCCTGATTGGAGCAGAGGTTTCCATTGTGTCTCTCAGAGCAGAAACGGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145195.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAACTTGCTCTCAAAATGGCCACATCATTTGGCATCACATCAGCATGAGGGTGGGCTGCACTTTTGGTTaGTCTGTAAAAAGCCATTGC | + |
|
Preference number: 3 (lower is better) Translates to: STCSQNGHIIWHHISMRVGCTFG*SVKSHC Trigger: GCAATGGCTTTTTACAGACAAACCAAAAGTGCAGCC...CACCCTCATGCTGATGTGATGCCAAATGATGTGGCCATTTTGAGAGCAAGTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
||
| 3UTR-3UTR CAA 90 bp | TATAATCTCAGCTCAAGTTCTTTGAACAGGCACAATGCTGTCCAGTGTATATATTTGCATATGTGCCTATaGCTCAGCCCAGGCCAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: YNLSSSSLNRHNAVQCIYLHMCL*LSPGQG Trigger: ACCCTGGCCTGGGCTGAGCAATAGGCACATATGCAA...ATATATACACTGGACAGCATTGTGCCTGTTCAAAGAACTTGAGCTGAGATTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
||
| 3UTR TCA 72 bp | AACCTGTCCTCCGGTCTTTCTGAGGAAGTAAACACCTaGGGTACTGTTAGCAGCGTAAAGCTTTCTAATTTG | + |
|
Preference number: 3 (lower is better) Translates to: NLSSGLSEEVNT*GTVSSVKLSNL Trigger: CAAATTAGAAAGCTTTACGCTGCTAACAGTACCTCAGGTGTTTACTTCCTCAGAAAGACCGGAGGACAGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051849.10 ENSMUST00000145195.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCTGTCCAGTGTATATATCACACATATCGGATGATTTGTGGCCTCTTGAGGACCTGAACATGTGTGCATaGTTACTCCTGCCTTATGAA | + |
|
Preference number: 3 (lower is better) Translates to: CCPVYISHISDDLWPLEDLNMCA*LLLPYE Trigger: TTCATAAGGCAGGAGTAACAATGCACACATGTTCAG...GTCCTCAAGAGGCCACAAATCATCCGATATGTGTGATATATACACTGGACAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
||
| 3UTR TCA 72 bp | GATGATTTGTGGCCTCTTGAGGACTTTCTGAAACTTTaGGGACTAAAACAAAAACAAGGCAAACCCTGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: DDLWPLEDFLKL*GLKQKQGKPCP Trigger: AGGACAGGGTTTGCCTTGTTTTTGTTTTAGTCCTCAAAGTTTCAGAAAGTCCTCAAGAGGCCACAAATCATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
||
| 3UTR TCA 72 bp | CCAGCATCAATATTTGATAAATTGACCTCTCTCCACTaGGGTACCTTTGTCCTTTTAAAAAGATCCCAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: PASIFDKLTSLH*GTFVLLKRSQA Trigger: AGCCTGGGATCTTTTTAAAAGGACAAAGGTACCTCAGTGGAGAGAGGTCAATTTATCAAATATTGATGCTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
||
| 3UTR GCA 72 bp | GAATGGGAACTCTGTGTCAGACACATCATATATGAGTaGATAGAAACACTGATCACCTCCAGCTATTTTAAC | + |
|
Preference number: 3 (lower is better) Translates to: EWELCVRHIIYE*IETLITSSYFN Trigger: GTTAAAATAGCTGGAGGTGATCAGTGTTTCTATGCACTCATATATGATGTGTCTGACACAGAGTTCCCATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
||
| 3UTR TCA 72 bp | ATTAGAATGGGAACTCTGTGTCAGACACATCATATATaGGTGCATAGAAACACTGATCACCTCCAGCTATTT | + |
|
Preference number: 3 (lower is better) Translates to: IRMGTLCQTHHI*VHRNTDHLQLF Trigger: AAATAGCTGGAGGTGATCAGTGTTTCTATGCACTCATATATGATGTGTCTGACACAGAGTTCCCATTCTAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
||
| 3UTR-3UTR CAA 90 bp | TATAATCTCAGCTCAAGTTCTTTGAACAGGCACAATGCTGTCCAGTGTATATATCTAAAAACCATCAACTaGCTCTCAAAATGGCCACAT | + |
|
Preference number: 3 (lower is better) Translates to: YNLSSSSLNRHNAVQCIYLKTIN*LSKWPH Trigger: ATGTGGCCATTTTGAGAGCAAGTTGATGGTTTTTAG...ATATATACACTGGACAGCATTGTGCCTGTTCAAAGAACTTGAGCTGAGATTATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
||
| CDS-3UTR GCA 90 bp | CAGGAAGCAGAGGCCAGGGATCTCTGTGACTTACCAGCCAGTCTGGTCTACGTACACACGCCTCCACGATaGAGGGACCCATGGCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: QEAEARDLCDLPASLVYVHTPPR*RDPWPV Trigger: GACTGGCCATGGGTCCCTGCATCGTGGAGGCGTGTG...TACGTAGACCAGACTGGCTGGTAAGTCACAGAGATCCCTGGCCTCTGCTTCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
||
| CDS-3UTR CCA 90 bp | CAGGAAGCAGAGGCCAGGGATCTCTGTGACTTACCAGCCAGTCTGGTCTACGTAGAGCCAATGGCAGCCTaGACCGTGGCCTTTGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QEAEARDLCDLPASLVYVEPMAA*TVAFGS Trigger: GCTTCCAAAGGCCACGGTCCAGGCTGCCATTGGCTC...TACGTAGACCAGACTGGCTGGTAAGTCACAGAGATCCCTGGCCTCTGCTTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
||
| CDS-3UTR CCA 90 bp | GTATGTACATTGGCCTGTGACCTGCACCATTACTTTTCCTCTTCTGGTCCCTCCTGGCAGCCTGGACCGTaGCCTTTGGAAGCCAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VCTLACDLHHYFSSSGPSWQPGP*PLEARQ Trigger: TTGCCTGGCTTCCAAAGGCCACGGTCCAGGCTGCCA...GGAGGGACCAGAAGAGGAAAAGTAATGGTGCAGGTCACAGGCCAATGTACATAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
||
| 3UTR CAA 72 bp | AAACCCAGAACCAGAAAGGCTCGCTTCCACACGAGGTaGTCCTGGTCCCTGCTCGGGAAGTACTGGATAAAA | + |
|
Preference number: 4 (lower is better) Translates to: KPRTRKARFHTR*SWSLLGKYWIK Trigger: TTTTATCCAGTACTTCCCGAGCAGGGACCAGGACAACCTCGTGTGGAAGCGAGCCTTTCTGGTTCTGGGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145195.8 |
||
| CDS-3UTR GCA 90 bp | CAGGAAGCAGAGGCCAGGGATCTCTGTGACTTACCAGCCAGTCTGGTCTACGTAAAGGCCAACCGTTTCTaGTCTGAGAGACACAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: QEAEARDLCDLPASLVYVKANRF*SERHNG Trigger: TCCATTGTGTCTCTCAGAGCAGAAACGGTTGGCCTT...TACGTAGACCAGACTGGCTGGTAAGTCACAGAGATCCCTGGCCTCTGCTTCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
||
| CDS-3UTR GCA 90 bp | GGCAGCCTGGACCGTGGCCTTTGGAAGCCAGGCAAAAGAAATAAATATCTTTTCACCCAGCTAGCAGCATaGCAAGAAGAGGAGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GSLDRGLWKPGKRNKYLFTQLAA*QEEEAE Trigger: CTCTGCCTCCTCTTCTTGGCATGCTGCTAGCTGGGT...GAAAAGATATTTATTTCTTTTGCCTGGCTTCCAAAGGCCACGGTCCAGGCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145195.8 |
||
| CDS-3UTR GCA 90 bp | CAGGAAGCAGAGGCCAGGGATCTCTGTGACTTACCAGCCAGTCTGGTCTACGTAAACGTCCCAGGTAACTaGAATGACCTTTTCTACCTC | + |
|
Preference number: 4 (lower is better) Translates to: QEAEARDLCDLPASLVYVNVPGN*NDLFYL Trigger: GAGGTAGAAAAGGTCATTGCAGTTACCTGGGACGTT...TACGTAGACCAGACTGGCTGGTAAGTCACAGAGATCCCTGGCCTCTGCTTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
||
| CDS-3UTR TCA 90 bp | TCAACTTGCTCTCAAAATGGCCACATCATTTGGCATCACATCAGCATGAGGGTGCTGCTAGGAAAGCCATaGCCAACGTGCAGAGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: STCSQNGHIIWHHISMRVLLGKP*PTCRVL Trigger: GAGGACTCTGCACGTTGGTCATGGCTTTCCTAGCAG...CACCCTCATGCTGATGTGATGCCAAATGATGTGGCCATTTTGAGAGCAAGTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
||
| CDS-3UTR GCA 90 bp | TCAACTTGCTCTCAAAATGGCCACATCATTTGGCATCACATCAGCATGAGGGTGAGGATGAACCCCCATTaGCATGGCAACCCCATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: STCSQNGHIIWHHISMRVRMNPH*HGNPIR Trigger: CCTGATGGGGTTGCCATGGCAATGGGGGTTCATCCT...CACCCTCATGCTGATGTGATGCCAAATGATGTGGCCATTTTGAGAGCAAGTTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
||
| CDS-3UTR CCA 90 bp | TCAACTTGCTCTCAAAATGGCCACATCATTTGGCATCACATCAGCATGAGGGTGGAACCCCCATTGCCATaGCAACCCCATCAGGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: STCSQNGHIIWHHISMRVEPPLP*QPHQEV Trigger: CACTTCCTGATGGGGTTGCCATGGCAATGGGGGTTC...CACCCTCATGCTGATGTGATGCCAAATGATGTGGCCATTTTGAGAGCAAGTTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
||
| CDS-3UTR TCA 90 bp | GGTAAACATGGTCCATCAGGCTTCCGTAATGGAATCCTCAGGCTTCCTCTGAATCAGCACGAACCAGAATaGCAGAAAGGGCTATGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GKHGPSGFRNGILRLPLNQHEPE*QKGLCF Trigger: GAAGCATAGCCCTTTCTGTCATTCTGGTTCGTGCTG...ATTCAGAGGAAGCCTGAGGATTCCATTACGGAAGCCTGATGGACCATGTTTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145195.8 |
||
| CDS-3UTR TCA 90 bp | TCAACTTGCTCTCAAAATGGCCACATCATTTGGCATCACATCAGCATGAGGGTGGCAGAAGTCTCTCCTTaGACCTCCTCTTCGGTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: STCSQNGHIIWHHISMRVAEVSP*TSSSVR Trigger: TCGAACCGAAGAGGAGGTTCAAGGAGAGACTTCTGC...CACCCTCATGCTGATGTGATGCCAAATGATGTGGCCATTTTGAGAGCAAGTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
||
| CDS-3UTR GCA 90 bp | TGCTGTCCAGTGTATATATCACACATATCGGATGATTTGTGGCCTCTTGAGGACACCCAGCTAGCAGCATaGCAAGAAGAGGAGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: CCPVYISHISDDLWPLEDTQLAA*QEEEAE Trigger: CTCTGCCTCCTCTTCTTGGCATGCTGCTAGCTGGGT...GTCCTCAAGAGGCCACAAATCATCCGATATGTGTGATATATACACTGGACAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
||
| CDS-3UTR CCA 90 bp | CACAGAGCCAATGGCAGCCTGGACCGTGGCCTTTGGAAGCCAGGCAAAAGAAATCAGAGGAGGCAATGTTaGAAACTTAATGAGTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: HRANGSLDRGLWKPGKRNQRRQC*KLNESK Trigger: TTTGGACTCATTAAGTTTCCAACATTGCCTCCTCTG...ATTTCTTTTGCCTGGCTTCCAAAGGCCACGGTCCAGGCTGCCATTGGCTCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145195.8 |
||
| 3UTR CAA 72 bp | CTCAGGCTTCCTCTGAATGTGTGCAGAAGTCTCTCCTaGAACCTCCTCTTCGGTTCGATGTTCAGATTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LRLPLNVCRSLS*NLLFGSMFRFL Trigger: CAGAAATCTGAACATCGAACCGAAGAGGAGGTTCAAGGAGAGACTTCTGCACACATTCAGAGGAAGCCTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145195.8 |
||
| CDS-3UTR GCA 90 bp | GTATGTACATTGGCCTGTGACCTGCACCATTACTTTTCCTCTTCTGGTCCCTCCAAGAAAAGATCCAGCTaGCACACCAATTACCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: VCTLACDLHHYFSSSGPSKKRSS*HTNYHL Trigger: GAGGTGGTAATTGGTGTGGCAGCTGGATCTTTTCTT...GGAGGGACCAGAAGAGGAAAAGTAATGGTGCAGGTCACAGGCCAATGTACATAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
||
| CDS-3UTR GCA 90 bp | GTATGTACATTGGCCTGTGACCTGCACCATTACTTTTCCTCTTCTGGTCCCTCCCACAATGGAAACCTCTaGTCCAATCAGGCCAAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VCTLACDLHHYFSSSGPSHNGNL*SNQAKK Trigger: CTTTTTGGCCTGATTGGAGCAGAGGTTTCCATTGTG...GGAGGGACCAGAAGAGGAAAAGTAATGGTGCAGGTCACAGGCCAATGTACATAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
||
| CDS-3UTR CCA 90 bp | TGCTGTCCAGTGTATATATCACACATATCGGATGATTTGTGGCCTCTTGAGGACGACTCTGCAGGCCATTaGGTTCTGTTGGTGAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CCPVYISHISDDLWPLEDDSAGH*VLLVSP Trigger: AGGACTCACCAACAGAACCCAATGGCCTGCAGAGTC...GTCCTCAAGAGGCCACAAATCATCCGATATGTGTGATATATACACTGGACAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
||
| CDS-3UTR TCA 90 bp | TGCTGTCCAGTGTATATATCACACATATCGGATGATTTGTGGCCTCTTGAGGACCAGCACGAACCAGAATaGCAGAAAGGGCTATGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CCPVYISHISDDLWPLEDQHEPE*QKGLCF Trigger: GAAGCATAGCCCTTTCTGTCATTCTGGTTCGTGCTG...GTCCTCAAGAGGCCACAAATCATCCGATATGTGTGATATATACACTGGACAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
||
| CDS-3UTR TCA 90 bp | TGCTGTCCAGTGTATATATCACACATATCGGATGATTTGTGGCCTCTTGAGGACTCCTCAGGCTTCCTCTaGATGTGTGCAGAAGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CCPVYISHISDDLWPLEDSSGFL*MCAEVS Trigger: AGAGACTTCTGCACACATTCAGAGGAAGCCTGAGGA...GTCCTCAAGAGGCCACAAATCATCCGATATGTGTGATATATACACTGGACAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
||
| CDS-3UTR TCA 90 bp | TGCAACACAAAGGCCAACCGTTTCTGCTCTGAGAGACACAATGGAAACCTCTGCAAAGTTTACCTCCGGTaGTGGAACAATAGAACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: CNTKANRFCSERHNGNLCKVYLR*WNNRTE Trigger: TTCTGTTCTATTGTTCCATCACCGGAGGTAAACTTT...GCAGAGGTTTCCATTGTGTCTCTCAGAGCAGAAACGGTTGGCCTTTGTGTTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145195.8 |
||
| CDS-3UTR TCA 90 bp | TGCTGTCCAGTGTATATATCACACATATCGGATGATTTGTGGCCTCTTGAGGACGACCTTTTCTACCTCTaGCTTCTTGTCAGTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: CCPVYISHISDDLWPLEDDLFYL*LLVSPP Trigger: AGGTGGACTGACAAGAAGTCAGAGGTAGAAAAGGTC...GTCCTCAAGAGGCCACAAATCATCCGATATGTGTGATATATACACTGGACAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
||
| CDS-3UTR TCA 90 bp | AGCTCAAGTTCTTTGAACAGGCACAATGCTGTCCAGTGTATATATCACACATATTCTTCCTGTAGTTCGTaGTGTGGAGGAGCCTCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSSSLNRHNAVQCIYHTYSSCSS*CGGASC Trigger: ACACGAGGCTCCTCCACATCACGAACTACAGGAAGA...ATATGTGTGATATATACACTGGACAGCATTGTGCCTGTTCAAAGAACTTGAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
||
| CDS-3UTR TCA 90 bp | TATAATCTCAGCTCAAGTTCTTTGAACAGGCACAATGCTGTCCAGTGTATATATCGACAAAACCCAGGATaGACCCCCATTGCCATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: YNLSSSSLNRHNAVQCIYRQNPG*TPIAMA Trigger: TGCCATGGCAATGGGGGTTCATCCTGGGTTTTGTCG...ATATATACACTGGACAGCATTGTGCCTGTTCAAAGAACTTGAGCTGAGATTATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
||
| CDS-3UTR TCA 90 bp | AGCTCAAGTTCTTTGAACAGGCACAATGCTGTCCAGTGTATATATCACACATATCGATGTTCAGATTTCTaGAGAACCCTGGGACCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSSSLNRHNAVQCIYHTYRCSDF*RTLGPS Trigger: GCTGGGTCCCAGGGTTCTTCAGAAATCTGAACATCG...ATATGTGTGATATATACACTGGACAGCATTGTGCCTGTTCAAAGAACTTGAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
||
| CDS-3UTR CCA 90 bp | TATAATCTCAGCTCAAGTTCTTTGAACAGGCACAATGCTGTCCAGTGTATATATAGCTGCTTCTCTCCGTaGGATCTTGCCGTGTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: YNLSSSSLNRHNAVQCIYSCFSP*DLAVSR Trigger: TCTGGACACGGCAAGATCCCACGGAGAGAAGCAGCT...ATATATACACTGGACAGCATTGTGCCTGTTCAAAGAACTTGAGCTGAGATTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
||
| CDS-3UTR GCA 90 bp | TATAATCTCAGCTCAAGTTCTTTGAACAGGCACAATGCTGTCCAGTGTATATATTGCGATGCTGAGGGTTaGAACACAAAGGCCAACCGT | + |
|
Preference number: 4 (lower is better) Translates to: YNLSSSSLNRHNAVQCIYCDAEG*NTKANR Trigger: ACGGTTGGCCTTTGTGTTGCAACCCTCAGCATCGCA...ATATATACACTGGACAGCATTGTGCCTGTTCAAAGAACTTGAGCTGAGATTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| CDS-3UTR CCA 90 bp | AGCTCAAGTTCTTTGAACAGGCACAATGCTGTCCAGTGTATATATCACACATATCTGGACCGTGGCCTTTaGAAGCCAGGCAAAAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SSSSLNRHNAVQCIYHTYLDRGL*KPGKRN Trigger: ATTTCTTTTGCCTGGCTTCCAAAGGCCACGGTCCAG...ATATGTGTGATATATACACTGGACAGCATTGTGCCTGTTCAAAGAACTTGAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| 3UTR CAA 72 bp | TTTATCCAGTCTTTAGAAAAACCCTTTGTATGTTCATaGCATATGTGCCTATTGCTCAGCCCAGGCCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FIQSLEKPFVCS*HMCLLLSPGQG Trigger: ACCCTGGCCTGGGCTGAGCAATAGGCACATATGCAATGAACATACAAAGGGTTTTTCTAAAGACTGGATAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| CDS-3UTR TCA 90 bp | AGCTCAAGTTCTTTGAACAGGCACAATGCTGTCCAGTGTATATATCACACATATGGTGGCTTTGAATGCTaGCATTCAGCTGTCTTATCT | + |
|
Preference number: 4 (lower is better) Translates to: SSSSLNRHNAVQCIYHTYGGFEC*HSAVLS Trigger: AGATAAGACAGCTGAATGTCAGCATTCAAAGCCACC...ATATGTGTGATATATACACTGGACAGCATTGTGCCTGTTCAAAGAACTTGAGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| CDS-3UTR GCA 90 bp | AGCTCAAGTTCTTTGAACAGGCACAATGCTGTCCAGTGTATATATCACACATATCTTCCTCTGAATGTGTaGAGAAGTCTCTCCTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SSSSLNRHNAVQCIYHTYLPLNV*RSLSLN Trigger: GTTCAAGGAGAGACTTCTGCACACATTCAGAGGAAG...ATATGTGTGATATATACACTGGACAGCATTGTGCCTGTTCAAAGAACTTGAGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| CDS-3UTR TCA 90 bp | AGCTCAAGTTCTTTGAACAGGCACAATGCTGTCCAGTGTATATATCACACATATTATGCTTCTCAAAGATaGCGACCACTTGTGTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SSSSLNRHNAVQCIYHTYYASQR*RPLVLD Trigger: ATCCAACACAAGTGGTCGTCATCTTTGAGAAGCATA...ATATGTGTGATATATACACTGGACAGCATTGTGCCTGTTCAAAGAACTTGAGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| 3UTR CAA 72 bp | CATTGCCTACCTAATGGGACACACGCTTCTCCTGTGTaGTCTTCTTTGTTCTGGTTTACATTTATGTTTATC | + |
|
Preference number: 4 (lower is better) Translates to: HCLPNGTHASPV*SSLFWFTFMFI Trigger: GATAAACATAAATGTAAACCAGAACAAAGAAGACAACACAGGAGAAGCGTGTGTCCCATTAGGTAGGCAATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| 3UTR CAA 72 bp | ATACTCTTGAGCCAACCTCTACTAAAAACCATCAACTaGCTCTCAAAATGGCCACATCATTTGGCATCACAT | + |
|
Preference number: 4 (lower is better) Translates to: ILLSQPLLKTIN*LSKWPHHLASH Trigger: ATGTGATGCCAAATGATGTGGCCATTTTGAGAGCAAGTTGATGGTTTTTAGTAGAGGTTGGCTCAAGAGTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| CDS-3UTR CCA 90 bp | AGCTCAAGTTCTTTGAACAGGCACAATGCTGTCCAGTGTATATATCACACATATCAGAGGAGGCAATGTTaGAAACTTAATGAGTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SSSSLNRHNAVQCIYHTYQRRQC*KLNESK Trigger: TTTGGACTCATTAAGTTTCCAACATTGCCTCCTCTG...ATATGTGTGATATATACACTGGACAGCATTGTGCCTGTTCAAAGAACTTGAGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| CDS-3UTR TCA 90 bp | TATAATCTCAGCTCAAGTTCTTTGAACAGGCACAATGCTGTCCAGTGTATATATAAAGTTTACCTCCGGTaGTGGAACAATAGAACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: YNLSSSSLNRHNAVQCIYKVYLR*WNNRTE Trigger: TTCTGTTCTATTGTTCCATCACCGGAGGTAAACTTT...ATATATACACTGGACAGCATTGTGCCTGTTCAAAGAACTTGAGCTGAGATTATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| 3UTR CAA 72 bp | TACATACATGCATACTATAATCTCAGCTCAAGTTCTTaGAACAGGCACAATGCTGTCCAGTGTATATATCAC | + |
|
Preference number: 4 (lower is better) Translates to: YIHAYYNLSSSS*NRHNAVQCIYH Trigger: GTGATATATACACTGGACAGCATTGTGCCTGTTCAAAGAACTTGAGCTGAGATTATAGTATGCATGTATGTA 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| CDS GCA 90 bp | CCATCAGGAAGTGTGAGAGAATCGCAGAAGCACACGCCTCCACGATaGAGGGACCCATGGCCAGTCGCACACACACACCCTTCAGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PSGSVRESQKHTPPR*RDPWPVAHTHPSAS Trigger: GGAAGCTGAAGGGTGTGTGTGTGCGACTGGCCATGGGTCCCTGCATCGTGGAGGCGTGTGCTTCTGCGATTCTCTCACACTTCCTGATGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| CDS TCA 90 bp | ACCCAGGATGAACCCCCATTGCCATGGCAACCCCATCAGGAAGTGTaGGAGAATCGCAGAAGCACACGCCTCCACGATGCAGGGACCCAT | + |
|
Preference number: 5 (lower is better) Translates to: TQDEPPLPWQPHQEV*ENRRSTRLHDAGTH Trigger: ATGGGTCCCTGCATCGTGGAGGCGTGTGCTTCTGCGATTCTCTCACACTTCCTGATGGGGTTGCCATGGCAATGGGGGTTCATCCTGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| CDS GCA 90 bp | CATGGCCCACAGAAGAACAACCATGGTACCGTTCGTTATCACTCTTaGCAGGCAGCCTCGTGGAGGGCAGGCCAGGAATCGCCTCAGACT | + |
|
Preference number: 5 (lower is better) Translates to: HGPQKNNHGTVRYHS*QAASWRAGQESPQT Trigger: AGTCTGAGGCGATTCCTGGCCTGCCCTCCACGAGGCTGCCTGGCAAGAGTGATAACGAACGGTACCATGGTTGTTCTTCTGTGGGCCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| CDS-3UTR CAA 90 bp | GTATGTACATTGGCCTGTGACCTGCACCATTACTTTTCCTCTTCTGGTCCCTCCCGCTTCCACACGAGGTaGTCCTGGTCCCTGCTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: VCTLACDLHHYFSSSGPSRFHTR*SWSLLG Trigger: CCCGAGCAGGGACCAGGACAACCTCGTGTGGAAGCG...GGAGGGACCAGAAGAGGAAAAGTAATGGTGCAGGTCACAGGCCAATGTACATAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| CDS CCA 90 bp | GTAGCCTCCTTCCTGCAAAAGGAGCATGGAGGGCACCACGACAGCTaGGGACACGGCACCTACGACAAAACTTTGAATCTAGACCAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: VASFLQKEHGGHHDS*GHGTYDKTLNLDQG Trigger: GCCTTGGTCTAGATTCAAAGTTTTGTCGTAGGTGCCGTGTCCCCAGCTGTCGTGGTGCCCTCCATGCTCCTTTTGCAGGAAGGAGGCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145195.8 |
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| CDS-3UTR CAA 90 bp | CAGGAAGCAGAGGCCAGGGATCTCTGTGACTTACCAGCCAGTCTGGTCTACGTAGCTTCCTCAGGGCCTTaGAATCTAGACCAAGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QEAEARDLCDLPASLVYVASSGP*NLDQGQ Trigger: CTGGCCTTGGTCTAGATTCAAAGGCCCTGAGGAAGC...TACGTAGACCAGACTGGCTGGTAAGTCACAGAGATCCCTGGCCTCTGCTTCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| CDS-3UTR CAA 90 bp | CAGGAAGCAGAGGCCAGGGATCTCTGTGACTTACCAGCCAGTCTGGTCTACGTACCTGGACCGTGGCCTTaGGAAGCCAGGCAAAAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: QEAEARDLCDLPASLVYVPGPWP*EARQKK Trigger: TTTCTTTTGCCTGGCTTCCAAAGGCCACGGTCCAGG...TACGTAGACCAGACTGGCTGGTAAGTCACAGAGATCCCTGGCCTCTGCTTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| CDS-3UTR CAA 90 bp | GTATGTACATTGGCCTGTGACCTGCACCATTACTTTTCCTCTTCTGGTCCCTCCGGCCATTGGGTTCTGTaGGTGAGTCCTGTGGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: VCTLACDLHHYFSSSGPSGHWVL*VSPVAF Trigger: AAAAGCCACAGGACTCACCAACAGAACCCAATGGCC...GGAGGGACCAGAAGAGGAAAAGTAATGGTGCAGGTCACAGGCCAATGTACATAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| CDS-3UTR CAA 90 bp | TCAACTTGCTCTCAAAATGGCCACATCATTTGGCATCACATCAGCATGAGGGTGACGCCTAAGCACGTGTaGAAGCCAGTGATGGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: STCSQNGHIIWHHISMRVTPKHV*KPVMAR Trigger: CCTGGCCATCACTGGCTTCAACACGTGCTTAGGCGT...CACCCTCATGCTGATGTGATGCCAAATGATGTGGCCATTTTGAGAGCAAGTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| CDS-3UTR CAA 90 bp | GTATGTACATTGGCCTGTGACCTGCACCATTACTTTTCCTCTTCTGGTCCCTCCTGCAGAAGTCTCTCCTaGAACCTCCTCTTCGGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: VCTLACDLHHYFSSSGPSCRSLS*NLLFGS Trigger: CGAACCGAAGAGGAGGTTCAAGGAGAGACTTCTGCA...GGAGGGACCAGAAGAGGAAAAGTAATGGTGCAGGTCACAGGCCAATGTACATAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| CDS TCA 90 bp | GCCAGCACGAACCAGAATGACAGAAAGGGCTATGCTTCTCAAAGATaGCGACCACTTGTGTTGGATCCGGACGCTATCATTGATGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: ASTNQNDRKGYASQR*RPLVLDPDAIIDDW Trigger: CCAGTCATCAATGATAGCGTCCGGATCCAACACAAGTGGTCGTCATCTTTGAGAAGCATAGCCCTTTCTGTCATTCTGGTTCGTGCTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051849.10 ENSMUST00000145195.8 |
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| CDS TCA 90 bp | AATTCCAAACAGATTTCCTCCAGGAAGACATTCAGGGCCGGTAACTaGCCAAACCATGGCCCACAGAAGAACAACCATGGTACCGTTCGT | + |
|
Preference number: 5 (lower is better) Translates to: NSKQISSRKTFRAGN*PNHGPQKNNHGTVR Trigger: ACGAACGGTACCATGGTTGTTCTTCTGTGGGCCATGGTTTGGTCAGTTACCGGCCCTGAATGTCTTCCTGGAGGAAATCTGTTTGGAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| CDS TCA 90 bp | TCCTCAGGGCCTTTGAATCTAGACCAAGGCCAGCACGAACCAGAATaGCAGAAAGGGCTATGCTTCTCAAAGATGACGACCACTTGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: SSGPLNLDQGQHEPE*QKGLCFSKMTTTCV Trigger: AACACAAGTGGTCGTCATCTTTGAGAAGCATAGCCCTTTCTGTCATTCTGGTTCGTGCTGGCCTTGGTCTAGATTCAAAGGCCCTGAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| CDS-3UTR CAA 90 bp | AGCTCAAGTTCTTTGAACAGGCACAATGCTGTCCAGTGTATATATCACACATATCAGGATGAACCCCCATaGCCATGGCAACCCCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: SSSSLNRHNAVQCIYHTYQDEPP*PWQPHQ Trigger: CTGATGGGGTTGCCATGGCAATGGGGGTTCATCCTG...ATATGTGTGATATATACACTGGACAGCATTGTGCCTGTTCAAAGAACTTGAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| CDS CCA 90 bp | ATGACAGAAAGGGCTATGCTTCTCAAAGATGACGACCACTTGTGTTaGATCCGGACGCTATCATTGATGACTGGGATATTCCTCAAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: MTERAMLLKDDDHLC*IRTLSLMTGIFLKR Trigger: TCTCTTGAGGAATATCCCAGTCATCAATGATAGCGTCCGGATCCAACACAAGTGGTCGTCATCTTTGAGAAGCATAGCCCTTTCTGTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051849.10 ENSMUST00000145195.8 |
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| CDS-3UTR CAA 90 bp | CAAGATGCCTCTGAAGATGTTAAAAACTGTAGATCCTGTGGAAAAGGCCACGCCACCTACGACAAAACTTaGAATCTAGACCAAGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QDASEDVKNCRSCGKGHATYDKT*NLDQGQ Trigger: CTGGCCTTGGTCTAGATTCAAAGTTTTGTCGTAGGT...GGCGTGGCCTTTTCCACAGGATCTACAGTTTTTAACATCTTCAGAGGCATCTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000145195.8 |
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| CDS TCA 90 bp | TACGACAAAACTTTGAATCTAGACCAAGGCCAGCACGAACCAGAATaGCAGAAAGGGCTATGCTTCTCAAAGATGACGACCACTTGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: YDKTLNLDQGQHEPE*QKGLCFSKMTTTCV Trigger: AACACAAGTGGTCGTCATCTTTGAGAAGCATAGCCCTTTCTGTCATTCTGGTTCGTGCTGGCCTTGGTCTAGATTCAAAGTTTTGTCGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145195.8 |
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| CDS-3UTR CAA 90 bp | AGCTCAAGTTCTTTGAACAGGCACAATGCTGTCCAGTGTATATATCACACATATTCTACCTCTGACTTCTaGTCAGTCCACCTCATGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SSSSLNRHNAVQCIYHTYSTSDF*SVHLMP Trigger: AGGCATGAGGTGGACTGACAAGAAGTCAGAGGTAGA...ATATGTGTGATATATACACTGGACAGCATTGTGCCTGTTCAAAGAACTTGAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| CDS GCA 72 bp | CCTCGTGGAGGGCAGGCCAGGAATCGCCTCAGACTCTaGAGGCCATTGGGTTCTGTTGGTGAGTCCTGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: PRGGQARNRLRL*RPLGSVGESCG Trigger: GCCACAGGACTCACCAACAGAACCCAATGGCCTGCAGAGTCTGAGGCGATTCCTGGCCTGCCCTCCACGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| CDS CCA 72 bp | TCGCAGAAGCACACGCCTCCACGATGCAGGGACCCATaGCCAGTCGCACACACACACCCTTCAGCTTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SQKHTPPRCRDP*PVAHTHPSASS Trigger: TGAGGAAGCTGAAGGGTGTGTGTGTGCGACTGGCCATGGGTCCCTGCATCGTGGAGGCGTGTGCTTCTGCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| CDS GCA 72 bp | AGTGTGAGAGAATCGCAGAAGCACACGCCTCCACGATaGAGGGACCCATGGCCAGTCGCACACACACACCCT | + |
|
Preference number: 6 (lower is better) Translates to: SVRESQKHTPPR*RDPWPVAHTHP Trigger: AGGGTGTGTGTGTGCGACTGGCCATGGGTCCCTGCATCGTGGAGGCGTGTGCTTCTGCGATTCTCTCACACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| CDS CAA 90 bp | CCATGGCCCACAGAAGAACAACCATGGTACCGTTCGTTATCACTCTaGCCAGGCAGCCTCGTGGAGGGCAGGCCAGGAATCGCCTCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: PWPTEEQPWYRSLSL*PGSLVEGRPGIASD Trigger: GTCTGAGGCGATTCCTGGCCTGCCCTCCACGAGGCTGCCTGGCAAGAGTGATAACGAACGGTACCATGGTTGTTCTTCTGTGGGCCATGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| CDS TCA 72 bp | GAACCCCCATTGCCATGGCAACCCCATCAGGAAGTGTaGGAGAATCGCAGAAGCACACGCCTCCACGATGCA | + |
|
Preference number: 6 (lower is better) Translates to: EPPLPWQPHQEV*ENRRSTRLHDA Trigger: TGCATCGTGGAGGCGTGTGCTTCTGCGATTCTCTCACACTTCCTGATGGGGTTGCCATGGCAATGGGGGTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| CDS GCA 72 bp | CAGAAGAACAACCATGGTACCGTTCGTTATCACTCTTaGCAGGCAGCCTCGTGGAGGGCAGGCCAGGAATCG | + |
|
Preference number: 6 (lower is better) Translates to: QKNNHGTVRYHS*QAASWRAGQES Trigger: CGATTCCTGGCCTGCCCTCCACGAGGCTGCCTGGCAAGAGTGATAACGAACGGTACCATGGTTGTTCTTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| CDS CCA 72 bp | TTCCTGCAAAAGGAGCATGGAGGGCACCACGACAGCTaGGGACACGGCACCTACGACAAAACCCAGGATGAA | + |
|
Preference number: 6 (lower is better) Translates to: FLQKEHGGHHDS*GHGTYDKTQDE Trigger: TTCATCCTGGGTTTTGTCGTAGGTGCCGTGTCCCCAGCTGTCGTGGTGCCCTCCATGCTCCTTTTGCAGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| CDS CAA 72 bp | ACAGAAGAACAACCATGGTACCGTTCGTTATCACTCTaGCCAGGCAGCCTCGTGGAGGGCAGGCCAGGAATC | + |
|
Preference number: 6 (lower is better) Translates to: TEEQPWYRSLSL*PGSLVEGRPGI Trigger: GATTCCTGGCCTGCCCTCCACGAGGCTGCCTGGCAAGAGTGATAACGAACGGTACCATGGTTGTTCTTCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| CDS CCA 72 bp | TTCCTGCAAAAGGAGCATGGAGGGCACCACGACAGCTaGGGACACGGCACCTACGACAAAACTTTGAATCTA | + |
|
Preference number: 6 (lower is better) Translates to: FLQKEHGGHHDS*GHGTYDKTLNL Trigger: TAGATTCAAAGTTTTGTCGTAGGTGCCGTGTCCCCAGCTGTCGTGGTGCCCTCCATGCTCCTTTTGCAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145195.8 |
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| CDS TCA 72 bp | TGGAGGAGCCTCGTGTGTGATCCCCGTAGGTGGCTTTaGATGCTGACATTCAGCTGTCTTATCTTCATCCTC | + |
|
Preference number: 6 (lower is better) Translates to: WRSLVCDPRRWL*MLTFSCLIFIL Trigger: GAGGATGAAGATAAGACAGCTGAATGTCAGCATTCAAAGCCACCTACGGGGATCACACACGAGGCTCCTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051849.10 ENSMUST00000149655.6 |
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| CDS TCA 72 bp | CAGATTTCCTCCAGGAAGACATTCAGGGCCGGTAACTaGCCAAACCATGGCCCACAGAAGAACAACCATGGT | + |
|
Preference number: 6 (lower is better) Translates to: QISSRKTFRAGN*PNHGPQKNNHG Trigger: ACCATGGTTGTTCTTCTGTGGGCCATGGTTTGGTCAGTTACCGGCCCTGAATGTCTTCCTGGAGGAAATCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| CDS TCA 72 bp | CCTTTGAATCTAGACCAAGGCCAGCACGAACCAGAATaGCAGAAAGGGCTATGCTTCTCAAAGATGACGACC | + |
|
Preference number: 6 (lower is better) Translates to: PLNLDQGQHEPE*QKGLCFSKMTT Trigger: GGTCGTCATCTTTGAGAAGCATAGCCCTTTCTGTCATTCTGGTTCGTGCTGGCCTTGGTCTAGATTCAAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051849.10 |
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| CDS CAA 72 bp | GATGACGACCACTTGTGTTGGATCCGGACGCTATCATaGATGACTGGGATATTCCTCAAGAGAAACCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: DDDHLCWIRTLS*MTGIFLKRNPA Trigger: AGCTGGGTTTCTCTTGAGGAATATCCCAGTCATCAATGATAGCGTCCGGATCCAACACAAGTGGTCGTCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051849.10 ENSMUST00000145195.8 |
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| CDS CAA 72 bp | ACAGAAAGGGCTATGCTTCTCAAAGATGACGACCACTaGTGTTGGATCCGGACGCTATCATTGATGACTGGG | + |
|
Preference number: 6 (lower is better) Translates to: TERAMLLKDDDH*CWIRTLSLMTG Trigger: CCCAGTCATCAATGATAGCGTCCGGATCCAACACAAGTGGTCGTCATCTTTGAGAAGCATAGCCCTTTCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051849.10 ENSMUST00000145195.8 |
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| CDS CAA 90 bp | CTTCTCAAAGATGACGACCACTTGTGTTGGATCCGGACGCTATCATaGATGACTGGGATATTCCTCAAGAGAAACCCAGCTAGCAGCATG | + |
|
Preference number: 6 (lower is better) Translates to: LLKDDDHLCWIRTLS*MTGIFLKRNPASSM Trigger: CATGCTGCTAGCTGGGTTTCTCTTGAGGAATATCCCAGTCATCAATGATAGCGTCCGGATCCAACACAAGTGGTCGTCATCTTTGAGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051849.10 ENSMUST00000145195.8 |
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| CDS CAA 90 bp | ACCAGAATGACAGAAAGGGCTATGCTTCTCAAAGATGACGACCACTaGTGTTGGATCCGGACGCTATCATTGATGACTGGGATATTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: TRMTERAMLLKDDDH*CWIRTLSLMTGIFL Trigger: GAGGAATATCCCAGTCATCAATGATAGCGTCCGGATCCAACACAAGTGGTCGTCATCTTTGAGAAGCATAGCCCTTTCTGTCATTCTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051849.10 ENSMUST00000145195.8 |
||
| CDS TCA 72 bp | ACTTTGAATCTAGACCAAGGCCAGCACGAACCAGAATaGCAGAAAGGGCTATGCTTCTCAAAGATGACGACC | + |
|
Preference number: 6 (lower is better) Translates to: TLNLDQGQHEPE*QKGLCFSKMTT Trigger: GGTCGTCATCTTTGAGAAGCATAGCCCTTTCTGTCATTCTGGTTCGTGCTGGCCTTGGTCTAGATTCAAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145195.8 |
||
| CDS CCA 72 bp | AGGGCTATGCTTCTCAAAGATGACGACCACTTGTGTTaGATCCGGACGCTATCATTGATGACTGGGATATTC | + |
|
Preference number: 6 (lower is better) Translates to: RAMLLKDDDHLC*IRTLSLMTGIF Trigger: GAATATCCCAGTCATCAATGATAGCGTCCGGATCCAACACAAGTGGTCGTCATCTTTGAGAAGCATAGCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051849.10 ENSMUST00000145195.8 |
||
| CDS TCA 72 bp | AACCAGAATGACAGAAAGGGCTATGCTTCTCAAAGATaGCGACCACTTGTGTTGGATCCGGACGCTATCATT | + |
|
Preference number: 6 (lower is better) Translates to: NQNDRKGYASQR*RPLVLDPDAII Trigger: AATGATAGCGTCCGGATCCAACACAAGTGGTCGTCATCTTTGAGAAGCATAGCCCTTTCTGTCATTCTGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051849.10 ENSMUST00000145195.8 |
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