Pregenerated sensors for SLC9A9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031129Ensembl transcript IDs: ENSMUST00000033463.10
Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCACACACCCGTGGGCAAGCAGCTCCTTGGAGGAGTGGGAAGAACTaGATGGAGAGAGCGCCAGCAAGGACAACAAGGCCCCCAATTCAT | + |
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Preference number: 1 (lower is better) Translates to: AHTRGQAAPWRSGKN*MERAPARTTRPPIH Trigger: ATGAATTGGGGGCCTTGTTGTCCTTGCTGGCGCTCTCTCCATGCAGTTCTTCCCACTCCTCCAAGGAGCTGCTTGCCCACGGGTGTGTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| 3UTR TCA 90 bp | TCTCTTCAATGCAGCCACTGGCCACTCTGGGAATGGGGGAGATCCTaGCTGGTGCTTGTCCTTGGTGCCTCAGTGTGGCCTAAATGTCAT | + |
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Preference number: 1 (lower is better) Translates to: SLQCSHWPLWEWGRS*LVLVLGASVWPKCH Trigger: ATGACATTTAGGCCACACTGAGGCACCAAGGACAAGCACCAGTCAGGATCTCCCCCATTCCCAGAGTGGCCAGTGGCTGCATTGAAGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| 3UTR GCA 90 bp | AATGCAGCCACTGGCCACTCTGGGAATGGGGGAGATCCTGACTGGTaGTTGTCCTTGGTGCCTCAGTGTGGCCTAAATGTCATTAGCTCT | + |
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Preference number: 1 (lower is better) Translates to: NAATGHSGNGGDPDW*LSLVPQCGLNVISS Trigger: AGAGCTAATGACATTTAGGCCACACTGAGGCACCAAGGACAAGCACCAGTCAGGATCTCCCCCATTCCCAGAGTGGCCAGTGGCTGCATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| 3UTR CCA 90 bp | ATGTGGGAAAGAGACCAGCTTTCCCTGGAGAGAGTCCCCTTAAGCTaGCAAGAGCCTACACTTAACATGCACACACCCGTGGGCAAGCAG | + |
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Preference number: 1 (lower is better) Translates to: MWERDQLSLERVPLS*QEPTLNMHTPVGKQ Trigger: CTGCTTGCCCACGGGTGTGTGCATGTTAAGTGTAGGCTCTTGCCAGCTTAAGGGGACTCTCTCCAGGGAAAGCTGGTCTCTTTCCCACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| 3UTR CCA 90 bp | TTCAATGCAGCCACTGGCCACTCTGGGAATGGGGGAGATCCTGACTaGTGCTTGTCCTTGGTGCCTCAGTGTGGCCTAAATGTCATTAGC | + |
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Preference number: 1 (lower is better) Translates to: FNAATGHSGNGGDPD*CLSLVPQCGLNVIS Trigger: GCTAATGACATTTAGGCCACACTGAGGCACCAAGGACAAGCACCAGTCAGGATCTCCCCCATTCCCAGAGTGGCCAGTGGCTGCATTGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| 3UTR TCA 90 bp | TGCACAATCCTCCAACCCCATGTGGAAGGGTCATGCTGCAAAACATaGCTTCCCAGCATGCAGAGGGAACCTGTCAGGAAGTTGTCCCAG | + |
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Preference number: 1 (lower is better) Translates to: CTILQPHVEGSCCKT*LPSMQREPVRKLSQ Trigger: CTGGGACAACTTCCTGACAGGTTCCCTCTGCATGCTGGGAAGTCATGTTTTGCAGCATGACCCTTCCACATGGGGTTGGAGGATTGTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| 3UTR-3UTR TCA 90 bp | GAGGGAACCTGTCAGGAAGTTGTCCCAGTGCACACAAGGAAGAGAGGCTCACCAGCCTGGAGAGCTGTCTaGGGAACAGAAGGGGCCCCC | + |
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Preference number: 2 (lower is better) Translates to: EGTCQEVVPVHTRKRGSPAWRAV*GTEGAP Trigger: GGGGGCCCCTTCTGTTCCTCAGACAGCTCTCCAGGC...TGGTGAGCCTCTCTTCCTTGTGTGCACTGGGACAACTTCCTGACAGGTTCCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| 3UTR-3UTR GCA 90 bp | CACTCTGGGAATGGGGGAGATCCTGACTGGTGCTTGTCCTTGGTGCCTCAGTGTACAGAAGGGGCCCCCTaGAGACACAGCACATATGGT | + |
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Preference number: 2 (lower is better) Translates to: HSGNGGDPDWCLSLVPQCTEGAP*RHSTYG Trigger: ACCATATGTGCTGTGTCTGCAGGGGGCCCCTTCTGT...ACACTGAGGCACCAAGGACAAGCACCAGTCAGGATCTCCCCCATTCCCAGAGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| 3UTR CAA 90 bp | GCAGCCACTGGCCACTCTGGGAATGGGGGAGATCCTGACTGGTGCTaGTCCTTGGTGCCTCAGTGTGGCCTAAATGTCATTAGCTCTGTT | + |
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Preference number: 2 (lower is better) Translates to: AATGHSGNGGDPDWC*SLVPQCGLNVISSV Trigger: AACAGAGCTAATGACATTTAGGCCACACTGAGGCACCAAGGACAAGCACCAGTCAGGATCTCCCCCATTCCCAGAGTGGCCAGTGGCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| 3UTR CAA 90 bp | GGCTTCAAAGGCACGAGTCATGCAGCTGAATTAAAAGCTATGATGTaGGTCTCTTCAATGCAGCCACTGGCCACTCTGGGAATGGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: GFKGTSHAAELKAMM*VSSMQPLATLGMGE Trigger: CTCCCCCATTCCCAGAGTGGCCAGTGGCTGCATTGAAGAGACCAACATCATAGCTTTTAATTCAGCTGCATGACTCGTGCCTTTGAAGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| 3UTR-3UTR TCA 90 bp | ACCCCATGTGGAAGGGTCATGCTGCAAAACATGACTTCCCAGCATGCAGAGGGAGGCCCCCAATTCATGTaGATTCTCCAAAGCCATCAA | + |
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Preference number: 2 (lower is better) Translates to: TPCGRVMLQNMTSQHAEGGPQFM*ILQSHQ Trigger: TTGATGGCTTTGGAGAATTCACATGAATTGGGGGCC...TCCCTCTGCATGCTGGGAAGTCATGTTTTGCAGCATGACCCTTCCACATGGGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| 3UTR-3UTR TCA 90 bp | TCTTCATCTCCCTCAAAAGTAAACCCATTACATCTTGGGCTCCCAAGTCTGAAGGAATGGGGGAGATCCTaGCTGGTGCTTGTCCTTGGT | + |
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Preference number: 2 (lower is better) Translates to: SSSPSKVNPLHLGLPSLKEWGRS*LVLVLG Trigger: ACCAAGGACAAGCACCAGTCAGGATCTCCCCCATTC...CTTCAGACTTGGGAGCCCAAGATGTAATGGGTTTACTTTTGAGGGAGATGAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| 3UTR-3UTR CCA 90 bp | CCAAGTCTGAAGCCTGCTCTTTGGAGCCTAATAGAACATCTGCACATCAAGAGATCTGCACCACCTCCTTaGCTGTTGGCATTCCTCAGT | + |
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Preference number: 2 (lower is better) Translates to: PSLKPALWSLIEHLHIKRSAPPP*LLAFLS Trigger: ACTGAGGAATGCCAACAGCCAAGGAGGTGGTGCAGA...TCTCTTGATGTGCAGATGTTCTATTAGGCTCCAAAGAGCAGGCTTCAGACTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| 3UTR CAA 90 bp | GTCAGGAAGTTGTCCCAGTGCACACAAGGAAGAGAGGCTCACCATTaGAATAAAACACAGAATGTGGGAAAGAGACCAGCTTTCCCTGGA | + |
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Preference number: 2 (lower is better) Translates to: VRKLSQCTQGREAHH*NKTQNVGKRPAFPG Trigger: TCCAGGGAAAGCTGGTCTCTTTCCCACATTCTGTGTTTTATTCAAATGGTGAGCCTCTCTTCCTTGTGTGCACTGGGACAACTTCCTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| 3UTR-3UTR TCA 90 bp | CCAAGTCTGAAGCCTGCTCTTTGGAGCCTAATAGAACATCTGCACATCAAGAGATCATGCTGCAAAACATaGCTTCCCAGCATGCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: PSLKPALWSLIEHLHIKRSCCKT*LPSMQR Trigger: CCTCTGCATGCTGGGAAGTCATGTTTTGCAGCATGA...TCTCTTGATGTGCAGATGTTCTATTAGGCTCCAAAGAGCAGGCTTCAGACTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| 3UTR-3UTR TCA 90 bp | CTAAGGCCTAAGAAGCACTCAGTGAAGCATGCATTAGTTTTAGCCTTTGGGCCTTATTGGTGGAAAAGGTaGGGGCTCCTGCACAATCCT | + |
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Preference number: 2 (lower is better) Translates to: LRPKKHSVKHALVLAFGPYWWKR*GLLHNP Trigger: AGGATTGTGCAGGAGCCCTCACCTTTTCCACCAATA...AGGCCCAAAGGCTAAAACTAATGCATGCTTCACTGAGTGCTTCTTAGGCCTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| 3UTR-3UTR CCA 90 bp | GGAGAGAGCGCCAGCAAGGACAACAAGGCCCCCAATTCATGTGAATTCTCCAAAGTACTGAACACACACTaGTTTCTGCATTTAGCCCTA | + |
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Preference number: 2 (lower is better) Translates to: GESASKDNKAPNSCEFSKVLNTH*FLHLAL Trigger: TAGGGCTAAATGCAGAAACCAGTGTGTGTTCAGTAC...TTTGGAGAATTCACATGAATTGGGGGCCTTGTTGTCCTTGCTGGCGCTCTCTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| 3UTR CAA 90 bp | AGTAAACCCATTACATCTTGGGCTCCCAAGTCTGAAGCCTGCTCTTaGGAGCCTAATAGAACATCTGCACATCAAGAGAAGCTAGGCTTG | + |
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Preference number: 2 (lower is better) Translates to: SKPITSWAPKSEACS*EPNRTSAHQEKLGL Trigger: CAAGCCTAGCTTCTCTTGATGTGCAGATGTTCTATTAGGCTCCAAAGAGCAGGCTTCAGACTTGGGAGCCCAAGATGTAATGGGTTTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| 3UTR-3UTR GCA 90 bp | GAGCCTAATAGAACATCTGCACATCAAGAGAAGCTAGGCTTGAGGTATCTTATGTGTTGGTCTCTTCAATaGAGCCACTGGCCACTCTGG | + |
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Preference number: 2 (lower is better) Translates to: EPNRTSAHQEKLGLRYLMCWSLQ*SHWPLW Trigger: CCAGAGTGGCCAGTGGCTGCATTGAAGAGACCAACA...CATAAGATACCTCAAGCCTAGCTTCTCTTGATGTGCAGATGTTCTATTAGGCTC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| 3UTR-3UTR TCA 90 bp | CGAACAAGTGGAGTCAAGTTGAGAGATAAGGCTTATCATTTATGCTCAGGAGTTAATCCAAAATCCACATaGAGGGCCTGGAGAGCTGTC | + |
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Preference number: 2 (lower is better) Translates to: RTSGVKLRDKAYHLCSGVNPKST*RAWRAV Trigger: GACAGCTCTCCAGGCCCTTCATGTGGATTTTGGATT...AACTCCTGAGCATAAATGATAAGCCTTATCTCTCAACTTGACTCCACTTGTTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| 3UTR-3UTR TCA 90 bp | AGAAATCGTTCTTCATCTCCCTCAAAAGTAAACCCATTACATCTTGGGCTCCCAGAGAGGCTCACCATTTaGATAAAACACAGAATGTGG | + |
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Preference number: 2 (lower is better) Translates to: RNRSSSPSKVNPLHLGLPERLTI*IKHRMW Trigger: CCACATTCTGTGTTTTATTCAAATGGTGAGCCTCTC...TGGGAGCCCAAGATGTAATGGGTTTACTTTTGAGGGAGATGAAGAACGATTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| 3UTR-3UTR TCA 90 bp | AGAAATCGTTCTTCATCTCCCTCAAAAGTAAACCCATTACATCTTGGGCTCCCAGTCTTGTGTTACATGTaGTTAAGTCTGCACTCATCA | + |
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Preference number: 2 (lower is better) Translates to: RNRSSSPSKVNPLHLGLPVLCYM*LSLHSS Trigger: TGATGAGTGCAGACTTAATCACATGTAACACAAGAC...TGGGAGCCCAAGATGTAATGGGTTTACTTTTGAGGGAGATGAAGAACGATTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| 3UTR-3UTR TCA 90 bp | AGAAATCGTTCTTCATCTCCCTCAAAAGTAAACCCATTACATCTTGGGCTCCCACAAGTGGAGTCAAGTTaGGAGATAAGGCTTATCATT | + |
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Preference number: 2 (lower is better) Translates to: RNRSSSPSKVNPLHLGLPQVESS*EIRLII Trigger: AATGATAAGCCTTATCTCTCAACTTGACTCCACTTG...TGGGAGCCCAAGATGTAATGGGTTTACTTTTGAGGGAGATGAAGAACGATTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| 3UTR-3UTR GCA 90 bp | AGAAATCGTTCTTCATCTCCCTCAAAAGTAAACCCATTACATCTTGGGCTCCCATTTTTGCCCCTCTATTaGCAATCAGTTACAGATATT | + |
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Preference number: 2 (lower is better) Translates to: RNRSSSPSKVNPLHLGLPFLPLY*QSVTDI Trigger: AATATCTGTAACTGATTGGCAATAGAGGGGCAAAAA...TGGGAGCCCAAGATGTAATGGGTTTACTTTTGAGGGAGATGAAGAACGATTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| 3UTR TCA 72 bp | TGCAGCCACTGGCCACTCTGGGAATGGGGGAGATCCTaGCTGGTGCTTGTCCTTGGTGCCTCAGTGTGGCCT | + |
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Preference number: 3 (lower is better) Translates to: CSHWPLWEWGRS*LVLVLGASVWP Trigger: AGGCCACACTGAGGCACCAAGGACAAGCACCAGTCAGGATCTCCCCCATTCCCAGAGTGGCCAGTGGCTGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| 3UTR CCA 72 bp | GCCACTGGCCACTCTGGGAATGGGGGAGATCCTGACTaGTGCTTGTCCTTGGTGCCTCAGTGTGGCCTAAAT | + |
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Preference number: 3 (lower is better) Translates to: ATGHSGNGGDPD*CLSLVPQCGLN Trigger: ATTTAGGCCACACTGAGGCACCAAGGACAAGCACCAGTCAGGATCTCCCCCATTCCCAGAGTGGCCAGTGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| 3UTR-3UTR CAA 90 bp | GAGGGAACCTGTCAGGAAGTTGTCCCAGTGCACACAAGGAAGAGAGGCTCACCATGGGCAAGCAGCTCCTaGGAGGAGTGGGAAGAACTG | + |
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Preference number: 3 (lower is better) Translates to: EGTCQEVVPVHTRKRGSPWASSS*EEWEEL Trigger: CAGTTCTTCCCACTCCTCCAAGGAGCTGCTTGCCCA...TGGTGAGCCTCTCTTCCTTGTGTGCACTGGGACAACTTCCTGACAGGTTCCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| 3UTR GCA 72 bp | ACTGGCCACTCTGGGAATGGGGGAGATCCTGACTGGTaGTTGTCCTTGGTGCCTCAGTGTGGCCTAAATGTC | + |
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Preference number: 3 (lower is better) Translates to: TGHSGNGGDPDW*LSLVPQCGLNV Trigger: GACATTTAGGCCACACTGAGGCACCAAGGACAAGCACCAGTCAGGATCTCCCCCATTCCCAGAGTGGCCAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| 3UTR CCA 72 bp | GCTGGCAAGAGCCTACACTTAACATGCACACACCCGTaGGCAAGCAGCTCCTTGGAGGAGTGGGAAGAACTG | + |
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Preference number: 3 (lower is better) Translates to: AGKSLHLTCTHP*ASSSLEEWEEL Trigger: CAGTTCTTCCCACTCCTCCAAGGAGCTGCTTGCCCACGGGTGTGTGCATGTTAAGTGTAGGCTCTTGCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| 3UTR GCA 72 bp | TGGAAGGGTCATGCTGCAAAACATGACTTCCCAGCATaGAGAGGGAACCTGTCAGGAAGTTGTCCCAGTGCA | + |
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Preference number: 3 (lower is better) Translates to: WKGHAAKHDFPA*RGNLSGSCPSA Trigger: TGCACTGGGACAACTTCCTGACAGGTTCCCTCTGCATGCTGGGAAGTCATGTTTTGCAGCATGACCCTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| 3UTR TCA 72 bp | GAGCGCCAGCAAGGACAACAAGGCCCCCAATTCATGTaGATTCTCCAAAGCCATCAAGAGTGGGTACTGAAC | + |
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Preference number: 3 (lower is better) Translates to: ERQQGQQGPQFM*ILQSHQEWVLN Trigger: GTTCAGTACCCACTCTTGATGGCTTTGGAGAATTCACATGAATTGGGGGCCTTGTTGTCCTTGCTGGCGCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| 3UTR GCA 72 bp | TCAGTTACAGATATTGGTGGAAAAGGTGAGGGCTCCTaGACAATCCTCCAACCCCATGTGGAAGGGTCATGC | + |
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Preference number: 3 (lower is better) Translates to: SVTDIGGKGEGS*TILQPHVEGSC Trigger: GCATGACCCTTCCACATGGGGTTGGAGGATTGTGCAGGAGCCCTCACCTTTTCCACCAATATCTGTAACTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| 3UTR-3UTR CAA 90 bp | CACTCTGGGAATGGGGGAGATCCTGACTGGTGCTTGTCCTTGGTGCCTCAGTGTCTTTTTGCCCCTCTATaGCCAATCAGTTACAGATAT | + |
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Preference number: 3 (lower is better) Translates to: HSGNGGDPDWCLSLVPQCLFAPL*PISYRY Trigger: ATATCTGTAACTGATTGGCAATAGAGGGGCAAAAAG...ACACTGAGGCACCAAGGACAAGCACCAGTCAGGATCTCCCCCATTCCCAGAGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| 3UTR-3UTR CAA 90 bp | CATTTGAATAAAACACAGAATGTGGGAAAGAGACCAGCTTTCCCTGGAGAGAGTCTCTGCACCACCTCCTaGGCTGTTGGCATTCCTCAG | + |
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Preference number: 3 (lower is better) Translates to: HLNKTQNVGKRPAFPGESLCTTS*AVGIPQ Trigger: CTGAGGAATGCCAACAGCCAAGGAGGTGGTGCAGAG...ACTCTCTCCAGGGAAAGCTGGTCTCTTTCCCACATTCTGTGTTTTATTCAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| 3UTR GCA 72 bp | AGCATGCAGAGGGAACCTGTCAGGAAGTTGTCCCAGTaGACACAAGGAAGAGAGGCTCACCATTTGAATAAA | + |
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Preference number: 3 (lower is better) Translates to: SMQREPVRKLSQ*TQGREAHHLNK Trigger: TTTATTCAAATGGTGAGCCTCTCTTCCTTGTGTGCACTGGGACAACTTCCTGACAGGTTCCCTCTGCATGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| 3UTR CCA 72 bp | CTCCAAAGCCATCAAGAGTGGGTACTGAACACACACTaGTTTCTGCATTTAGCCCTATGGTCCGAACAAGTG | + |
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Preference number: 3 (lower is better) Translates to: LQSHQEWVLNTH*FLHLALWSEQV Trigger: CACTTGTTCGGACCATAGGGCTAAATGCAGAAACCAGTGTGTGTTCAGTACCCACTCTTGATGGCTTTGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| 3UTR-3UTR CAA 90 bp | ACAGATATTGGTGGAAAAGGTGAGGGCTCCTGCACAATCCTCCAACCCCATGTGACAAGTGGAGTCAAGTaGAGAGATAAGGCTTATCAT | + |
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Preference number: 3 (lower is better) Translates to: TDIGGKGEGSCTILQPHVTSGVK*RDKAYH Trigger: ATGATAAGCCTTATCTCTCAACTTGACTCCACTTGT...CACATGGGGTTGGAGGATTGTGCAGGAGCCCTCACCTTTTCCACCAATATCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| 3UTR CCA 72 bp | TTACATCTTGGGCTCCCAAGTCTGAAGCCTGCTCTTTaGAGCCTAATAGAACATCTGCACATCAAGAGAAGC | + |
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Preference number: 3 (lower is better) Translates to: LHLGLPSLKPAL*SLIEHLHIKRS Trigger: GCTTCTCTTGATGTGCAGATGTTCTATTAGGCTCCAAAGAGCAGGCTTCAGACTTGGGAGCCCAAGATGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| 3UTR CCA 72 bp | TTCTTCATCTCCCTCAAAAGTAAACCCATTACATCTTaGGCTCCCAAGTCTGAAGCCTGCTCTTTGGAGCCT | + |
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Preference number: 3 (lower is better) Translates to: FFISLKSKPITS*APKSEACSLEP Trigger: AGGCTCCAAAGAGCAGGCTTCAGACTTGGGAGCCCAAGATGTAATGGGTTTACTTTTGAGGGAGATGAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| 3UTR TCA 72 bp | CATTTAGCCCTATGGTCCGAACAAGTGGAGTCAAGTTaGGAGATAAGGCTTATCATTTATGCTCAGGAGTTT | + |
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Preference number: 3 (lower is better) Translates to: HLALWSEQVESS*EIRLIIYAQEF Trigger: AAACTCCTGAGCATAAATGATAAGCCTTATCTCTCAACTTGACTCCACTTGTTCGGACCATAGGGCTAAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| 3UTR TCA 72 bp | GGTATCTTATGGCTTCAAAGGCACGAGTCATGCAGCTaGATTAAAAGCTATGATGTTGGTCTCTTCAATGCA | + |
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Preference number: 3 (lower is better) Translates to: GILWLQRHESCS*IKSYDVGLFNA Trigger: TGCATTGAAGAGACCAACATCATAGCTTTTAATTCAGCTGCATGACTCGTGCCTTTGAAGCCATAAGATACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| 3UTR TCA 72 bp | CTCAGTGAAGCATGCATTAGTTTTAGCCTTTGGGCCTaGGAAAGAAATCGTTCTTCATCTCCCTCAAAAGTA | + |
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Preference number: 3 (lower is better) Translates to: LSEACISFSLWA*ERNRSSSPSKV Trigger: TACTTTTGAGGGAGATGAAGAACGATTTCTTTCTCAGGCCCAAAGGCTAAAACTAATGCATGCTTCACTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| 3UTR TCA 72 bp | TTTCTGAAGGCACGGGAGGATACATGTGATAAGGTTTaGTTCTGTCCAATTCATGTTCTTAATACTCTTTCT | + |
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Preference number: 3 (lower is better) Translates to: FLKAREDTCDKV*FCPIHVLNTLS Trigger: AGAAAGAGTATTAAGAACATGAATTGGACAGAATCAAACCTTATCACATGTATCCTCCCGTGCCTTCAGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS-3UTR TCA 90 bp | CACTCTGGGAATGGGGGAGATCCTGACTGGTGCTTGTCCTTGGTGCCTCAGTGTAGGCCTGCGGACTGGTaGGCAGCCTGGAGACTGGGC | + |
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Preference number: 4 (lower is better) Translates to: HSGNGGDPDWCLSLVPQCRPADW*AAWRLG Trigger: GCCCAGTCTCCAGGCTGCTCACCAGTCCGCAGGCCT...ACACTGAGGCACCAAGGACAAGCACCAGTCAGGATCTCCCCCATTCCCAGAGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS-3UTR CCA 90 bp | CACTCTGGGAATGGGGGAGATCCTGACTGGTGCTTGTCCTTGGTGCCTCAGTGTGAAGCCACGTCAGCATaGGGGTCGTTCCTCCTCCAA | + |
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Preference number: 4 (lower is better) Translates to: HSGNGGDPDWCLSLVPQCEATSA*GSFLLQ Trigger: TTGGAGGAGGAACGACCCCCATGCTGACGTGGCTTC...ACACTGAGGCACCAAGGACAAGCACCAGTCAGGATCTCCCCCATTCCCAGAGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS-3UTR TCA 90 bp | ACCCCATGTGGAAGGGTCATGCTGCAAAACATGACTTCCCAGCATGCAGAGGGAGCCTGGAGTCTGGCCTaGAGACTTCTGGTCCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: TPCGRVMLQNMTSQHAEGAWSLA*RLLVQS Trigger: GCTCTGGACCAGAAGTCTTCAGGCCAGACTCCAGGC...TCCCTCTGCATGCTGGGAAGTCATGTTTTGCAGCATGACCCTTCCACATGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS-3UTR CCA 90 bp | CACTCTGGGAATGGGGGAGATCCTGACTGGTGCTTGTCCTTGGTGCCTCAGTGTATGGCGTTGCCTTGGTaGGGGCTGATATTGTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: HSGNGGDPDWCLSLVPQCMALPW*GLILCW Trigger: CCAGCACAATATCAGCCCCCACCAAGGCAACGCCAT...ACACTGAGGCACCAAGGACAAGCACCAGTCAGGATCTCCCCCATTCCCAGAGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS-3UTR CCA 90 bp | CACTCTGGGAATGGGGGAGATCCTGACTGGTGCTTGTCCTTGGTGCCTCAGTGTTCCTTGCCTGGAGTCTaGCCTGAAGACTTCTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HSGNGGDPDWCLSLVPQCSLPGV*PEDFWS Trigger: GGACCAGAAGTCTTCAGGCCAGACTCCAGGCAAGGA...ACACTGAGGCACCAAGGACAAGCACCAGTCAGGATCTCCCCCATTCCCAGAGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS-3UTR TCA 90 bp | ATGCTGCAAAACATGACTTCCCAGCATGCAGAGGGAACCTGTCAGGAAGTTGTCGGTGGGACTGCTGGGTaGAGGGCTCTGCTCCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: MLQNMTSQHAEGTCQEVVGGTAG*RALLLV Trigger: TACCAGGAGCAGAGCCCTTCACCCAGCAGTCCCACC...GACAACTTCCTGACAGGTTCCCTCTGCATGCTGGGAAGTCATGTTTTGCAGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS-3UTR CCA 90 bp | AGAAGGGGCCCCCTGCAGACACAGCACATATGGTTCATCCCAATGGCAGCTAGGGGCCAGCACTGTCACTaGATCTGTAGCAGACATCAG | + |
|
Preference number: 4 (lower is better) Translates to: RRGPLQTQHIWFIPMAARGQHCH*ICSRHQ Trigger: CTGATGTCTGCTACAGATCCAGTGACAGTGCTGGCC...CCTAGCTGCCATTGGGATGAACCATATGTGCTGTGTCTGCAGGGGGCCCCTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS-3UTR CCA 90 bp | AACATGCACACACCCGTGGGCAAGCAGCTCCTTGGAGGAGTGGGAAGAACTGCAAGGTCTGGGTCCACGTaGAGTTCATGGAAAATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: NMHTPVGKQLLGGVGRTARSGST*SSWKMA Trigger: GGCCATTTTCCATGAACTCCACGTGGACCCAGACCT...TGCAGTTCTTCCCACTCCTCCAAGGAGCTGCTTGCCCACGGGTGTGTGCATGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| 3UTR CAA 72 bp | GGCCACTCTGGGAATGGGGGAGATCCTGACTGGTGCTaGTCCTTGGTGCCTCAGTGTGGCCTAAATGTCATT | + |
|
Preference number: 4 (lower is better) Translates to: GHSGNGGDPDWC*SLVPQCGLNVI Trigger: AATGACATTTAGGCCACACTGAGGCACCAAGGACAAGCACCAGTCAGGATCTCCCCCATTCCCAGAGTGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS-3UTR TCA 90 bp | GCAGAGGGAACCTGTCAGGAAGTTGTCCCAGTGCACACAAGGAAGAGAGGCTCAATCATCTGTTTGGGCTaGGATTCCGTGTTGCGGATG | + |
|
Preference number: 4 (lower is better) Translates to: AEGTCQEVVPVHTRKRGSIICLG*DSVLRM Trigger: CATCCGCAACACGGAATCTCAGCCCAAACAGATGAT...TGAGCCTCTCTTCCTTGTGTGCACTGGGACAACTTCCTGACAGGTTCCCTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS-3UTR GCA 90 bp | ACATGCACACACCCGTGGGCAAGCAGCTCCTTGGAGGAGTGGGAAGAACTGCATAACTTATTTGCTTCCTaGTGTGAGGAGGGCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TCTHPWASSSLEEWEELHNLFAS*CEEGSS Trigger: GGAAGAGCCCTCCTCACAGCAGGAAGCAAATAAGTT...ATGCAGTTCTTCCCACTCCTCCAAGGAGCTGCTTGCCCACGGGTGTGTGCATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS-3UTR GCA 90 bp | GCAGAGGGAACCTGTCAGGAAGTTGTCCCAGTGCACACAAGGAAGAGAGGCTCACGTAGATATTCTCCTTaGCTGGAGTCTGGCCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AEGTCQEVVPVHTRKRGSRRYSP*LESGLK Trigger: CTTCAGGCCAGACTCCAGGCAAGGAGAATATCTACG...TGAGCCTCTCTTCCTTGTGTGCACTGGGACAACTTCCTGACAGGTTCCCTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| 3UTR CAA 72 bp | TCTGGGAATGGGGGAGATCCTGACTGGTGCTTGTCCTaGGTGCCTCAGTGTGGCCTAAATGTCATTAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SGNGGDPDWCLS*VPQCGLNVISS Trigger: AGAGCTAATGACATTTAGGCCACACTGAGGCACCAAGGACAAGCACCAGTCAGGATCTCCCCCATTCCCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS-3UTR TCA 90 bp | ACCCCATGTGGAAGGGTCATGCTGCAAAACATGACTTCCCAGCATGCAGAGGGAGGCACCTCGCAAACCTaGAAACATCATCATGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TPCGRVMLQNMTSQHAEGGTSQT*KHHHVL Trigger: CAGCACATGATGATGTTTTCAGGTTTGCGAGGTGCC...TCCCTCTGCATGCTGGGAAGTCATGTTTTGCAGCATGACCCTTCCACATGGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS-3UTR GCA 90 bp | ATCCAAAATCCACATGAAGGGCCTGGAGAGCTGTCTGAGGAACAGAAGGGGCCCTTCCAGGGAATCTTCTaGTTTCTGCCCAGATTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: IQNPHEGPGELSEEQKGPFQGIF*FLPRFR Trigger: CCTGAATCTGGGCAGAAAGCAGAAGATTCCCTGGAA...GGGCCCCTTCTGTTCCTCAGACAGCTCTCCAGGCCCTTCATGTGGATTTTGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS-3UTR CCA 90 bp | TCTTCATCTCCCTCAAAAGTAAACCCATTACATCTTGGGCTCCCAAGTCTGAAGACCACGCTGGCAAGGTaGTGGTCAGTGGAGGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSSPSKVNPLHLGLPSLKTTLAR*WSVEGL Trigger: CAGGCCCTCCACTGACCACCACCTTGCCAGCGTGGT...CTTCAGACTTGGGAGCCCAAGATGTAATGGGTTTACTTTTGAGGGAGATGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS-3UTR GCA 90 bp | ACCCCATGTGGAAGGGTCATGCTGCAAAACATGACTTCCCAGCATGCAGAGGGAAGATCCCTAGGAAATTaGCCACGGATTGGAAGAACG | + |
|
Preference number: 4 (lower is better) Translates to: TPCGRVMLQNMTSQHAEGRSLGN*PRIGRT Trigger: CGTTCTTCCAATCCGTGGGCAATTTCCTAGGGATCT...TCCCTCTGCATGCTGGGAAGTCATGTTTTGCAGCATGACCCTTCCACATGGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS-3UTR GCA 90 bp | CTGTCTCTCTCTGCACCACCTCCTTGGCTGTTGGCATTCCTCAGTGGTCTTGTGCATTCTGAAGAGCTGTaGACTCTCTGTCTTCGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LSLSAPPPWLLAFLSGLVHSEEL*TLCLRH Trigger: ATGACGAAGACAGAGAGTGCACAGCTCTTCAGAATG...CACAAGACCACTGAGGAATGCCAACAGCCAAGGAGGTGGTGCAGAGAGAGACAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS-3UTR TCA 90 bp | TTGCCCCTCTATTGCCAATCAGTTACAGATATTGGTGGAAAAGGTGAGGGCTCCGGAGCAGTGTGGTGGTaGACATCATCTGTTTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LPLYCQSVTDIGGKGEGSGAVWW*TSSVWA Trigger: AGCCCAAACAGATGATGTTCACCACCACACTGCTCC...GGAGCCCTCACCTTTTCCACCAATATCTGTAACTGATTGGCAATAGAGGGGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS-3UTR CCA 90 bp | TTGCCCCTCTATTGCCAATCAGTTACAGATATTGGTGGAAAAGGTGAGGGCTCCGGCCAGCATGCACCATaGCTTTCACAAAGCCGTACA | + |
|
Preference number: 4 (lower is better) Translates to: LPLYCQSVTDIGGKGEGSGQHAP*LSQSRT Trigger: TGTACGGCTTTGTGAAAGCCATGGTGCATGCTGGCC...GGAGCCCTCACCTTTTCCACCAATATCTGTAACTGATTGGCAATAGAGGGGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS-3UTR CCA 90 bp | GCAGAGGGAACCTGTCAGGAAGTTGTCCCAGTGCACACAAGGAAGAGAGGCTCAGTTTGGTCCTCAGTTTaGAATCCGATGACAGATTGT | + |
|
Preference number: 4 (lower is better) Translates to: AEGTCQEVVPVHTRKRGSVWSSV*NPMTDC Trigger: ACAATCTGTCATCGGATTCCAAACTGAGGACCAAAC...TGAGCCTCTCTTCCTTGTGTGCACTGGGACAACTTCCTGACAGGTTCCCTCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS-3UTR CCA 90 bp | ATGCACACACCCGTGGGCAAGCAGCTCCTTGGAGGAGTGGGAAGAACTGCATGGAAATGTTGCAGGCTCTaGCAACAAAAATTGCTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: MHTPVGKQLLGGVGRTAWKCCRL*QQKLLE Trigger: TTCTAGCAATTTTTGTTGCCAGAGCCTGCAACATTT...CCATGCAGTTCTTCCCACTCCTCCAAGGAGCTGCTTGCCCACGGGTGTGTGCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS-3UTR CCA 90 bp | CATTTGAATAAAACACAGAATGTGGGAAAGAGACCAGCTTTCCCTGGAGAGAGTACGCTGGCAAGGTGGTaGTCAGTGGAGGGCCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: HLNKTQNVGKRPAFPGESTLARW*SVEGLS Trigger: ACTCAGGCCCTCCACTGACCACCACCTTGCCAGCGT...ACTCTCTCCAGGGAAAGCTGGTCTCTTTCCCACATTCTGTGTTTTATTCAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| 3UTR CAA 72 bp | GGCACGAGTCATGCAGCTGAATTAAAAGCTATGATGTaGGTCTCTTCAATGCAGCCACTGGCCACTCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GTSHAAELKAMM*VSSMQPLATLG Trigger: TCCCAGAGTGGCCAGTGGCTGCATTGAAGAGACCAACATCATAGCTTTTAATTCAGCTGCATGACTCGTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS-3UTR CCA 90 bp | AGAAATCGTTCTTCATCTCCCTCAAAAGTAAACCCATTACATCTTGGGCTCCCATCATCTTCTCCAGTATaGCGTTGCCTTGGTGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RNRSSSPSKVNPLHLGLPSSSPV*RCLGGG Trigger: GCCCCCACCAAGGCAACGCCATACTGGAGAAGATGA...TGGGAGCCCAAGATGTAATGGGTTTACTTTTGAGGGAGATGAAGAACGATTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS-3UTR CCA 90 bp | TCTTCATCTCCCTCAAAAGTAAACCCATTACATCTTGGGCTCCCAAGTCTGAAGCAGTGTGTACAGGTCTaGGTCCACGTGGAGTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: SSSPSKVNPLHLGLPSLKQCVQV*VHVEFM Trigger: CATGAACTCCACGTGGACCCAGACCTGTACACACTG...CTTCAGACTTGGGAGCCCAAGATGTAATGGGTTTACTTTTGAGGGAGATGAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS-3UTR CCA 90 bp | ATCCAAAATCCACATGAAGGGCCTGGAGAGCTGTCTGAGGAACAGAAGGGGCCCGGTTTCAGGTATTTGTaGTCAAATCCATACCACATT | + |
|
Preference number: 4 (lower is better) Translates to: IQNPHEGPGELSEEQKGPGFRYL*SNPYHI Trigger: AATGTGGTATGGATTTGACCACAAATACCTGAAACC...GGGCCCCTTCTGTTCCTCAGACAGCTCTCCAGGCCCTTCATGTGGATTTTGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS-3UTR CCA 90 bp | CTAAATGTCATTAGCTCTGTTCTTTTTGCCCCTCTATTGCCAATCAGTTACAGAGGTCCAGAGCTAGCTTaGTGGTGGGACTGCTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LNVISSVLFAPLLPISYRGPELA*WWDCWV Trigger: CACCCAGCAGTCCCACCACCAAGCTAGCTCTGGACC...TCTGTAACTGATTGGCAATAGAGGGGCAAAAAGAACAGAGCTAATGACATTTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS-3UTR TCA 90 bp | ATTGCCAATCAGTTACAGATATTGGTGGAAAAGGTGAGGGCTCCTGCACAATCCGTAGAGTTGATGGGCTaGAGAACAAGTTCCCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: IANQLQILVEKVRAPAQSVELMG*RTSSHS Trigger: ACTGTGGGAACTTGTTCTTCAGCCCATCAACTCTAC...GGATTGTGCAGGAGCCCTCACCTTTTCCACCAATATCTGTAACTGATTGGCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS-3UTR TCA 90 bp | ATGCTGCAAAACATGACTTCCCAGCATGCAGAGGGAACCTGTCAGGAAGTTGTCAAAATAAACAGTCAGTaGAGTGGAAGTCTCCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: MLQNMTSQHAEGTCQEVVKINSQ*SGSLRS Trigger: AGAGCGGAGACTTCCACTTCACTGACTGTTTATTTT...GACAACTTCCTGACAGGTTCCCTCTGCATGCTGGGAAGTCATGTTTTGCAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS-3UTR TCA 90 bp | GAGCCTAATAGAACATCTGCACATCAAGAGAAGCTAGGCTTGAGGTATCTTATGATTTGCTTCCTGCTGTaGGGAGGGCTCTTCCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: EPNRTSAHQEKLGLRYLMICFLL*GGLFLQ Trigger: CTGAAGGAAGAGCCCTCCTCACAGCAGGAAGCAAAT...CATAAGATACCTCAAGCCTAGCTTCTCTTGATGTGCAGATGTTCTATTAGGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS-3UTR TCA 90 bp | CGAACAAGTGGAGTCAAGTTGAGAGATAAGGCTTATCATTTATGCTCAGGAGTTGAGTCTGCTCCAGTTTaGGATCATAGCCTCCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RTSGVKLRDKAYHLCSGVESAPV*DHSLPG Trigger: GCCTGGGAGGCTATGATCTCAAACTGGAGCAGACTC...AACTCCTGAGCATAAATGATAAGCCTTATCTCTCAACTTGACTCCACTTGTTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS-3UTR CCA 90 bp | CCAAGTCTGAAGCCTGCTCTTTGGAGCCTAATAGAACATCTGCACATCAAGAGAAAACAGTCAGTGAAGTaGAAGTCTCCGCTCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PSLKPALWSLIEHLHIKRKQSVK*KSPLFS Trigger: GCTGAAGAGCGGAGACTTCCACTTCACTGACTGTTT...TCTCTTGATGTGCAGATGTTCTATTAGGCTCCAAAGAGCAGGCTTCAGACTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS-3UTR CCA 90 bp | TCTTCATCTCCCTCAAAAGTAAACCCATTACATCTTGGGCTCCCAAGTCTGAAGTCCACGTGGAGTTCATaGAAAATGGCCAGCACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SSSPSKVNPLHLGLPSLKSTWSS*KMASTV Trigger: GACAGTGCTGGCCATTTTCCATGAACTCCACGTGGA...CTTCAGACTTGGGAGCCCAAGATGTAATGGGTTTACTTTTGAGGGAGATGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS-3UTR GCA 90 bp | CATTTGAATAAAACACAGAATGTGGGAAAGAGACCAGCTTTCCCTGGAGAGAGTTTCAGCTGGCCAGCATaGACCATGGCTTTCACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: HLNKTQNVGKRPAFPGESFSWPA*TMAFTK Trigger: CTTTGTGAAAGCCATGGTGCATGCTGGCCAGCTGAA...ACTCTCTCCAGGGAAAGCTGGTCTCTTTCCCACATTCTGTGTTTTATTCAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS-3UTR CCA 90 bp | ATTGCCAATCAGTTACAGATATTGGTGGAAAAGGTGAGGGCTCCTGCACAATCCTATCAGTCGGCGCTGTaGCATATCGCAAAATTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: IANQLQILVEKVRAPAQSYQSAL*HIAKLV Trigger: GACTAATTTTGCGATATGCCACAGCGCCGACTGATA...GGATTGTGCAGGAGCCCTCACCTTTTCCACCAATATCTGTAACTGATTGGCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS-3UTR CCA 90 bp | GAGCCTAATAGAACATCTGCACATCAAGAGAAGCTAGGCTTGAGGTATCTTATGCCGTGTCAAACGCGTTaGGATTCTCCTTGGGACTAT | + |
|
Preference number: 4 (lower is better) Translates to: EPNRTSAHQEKLGLRYLMPCQTR*DSPWDY Trigger: ATAGTCCCAAGGAGAATCCCAACGCGTTTGACACGG...CATAAGATACCTCAAGCCTAGCTTCTCTTGATGTGCAGATGTTCTATTAGGCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| 3UTR CAA 72 bp | ATTACATCTTGGGCTCCCAAGTCTGAAGCCTGCTCTTaGGAGCCTAATAGAACATCTGCACATCAAGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ITSWAPKSEACS*EPNRTSAHQEK Trigger: CTTCTCTTGATGTGCAGATGTTCTATTAGGCTCCAAAGAGCAGGCTTCAGACTTGGGAGCCCAAGATGTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS-3UTR TCA 90 bp | AGAAATCGTTCTTCATCTCCCTCAAAAGTAAACCCATTACATCTTGGGCTCCCAAAATTAGTCCCATTATaGGGCCATACACCATCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RNRSSSPSKVNPLHLGLPKLVPL*GHTPSP Trigger: GGGCGATGGTGTATGGCCTCATAATGGGACTAATTT...TGGGAGCCCAAGATGTAATGGGTTTACTTTTGAGGGAGATGAAGAACGATTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS-3UTR TCA 90 bp | CATTTGAATAAAACACAGAATGTGGGAAAGAGACCAGCTTTCCCTGGAGAGAGTAGACTGTATCCTGCATaGAATATGATGGGAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HLNKTQNVGKRPAFPGESRLYPA*NMMGGS Trigger: GCTGCCTCCCATCATATTTCATGCAGGATACAGTCT...ACTCTCTCCAGGGAAAGCTGGTCTCTTTCCCACATTCTGTGTTTTATTCAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS-3UTR TCA 90 bp | ATGCTGCAAAACATGACTTCCCAGCATGCAGAGGGAACCTGTCAGGAAGTTGTCATGGATCCCAAGTTTTaGAAAAAGTGTCTCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: MLQNMTSQHAEGTCQEVVMDPKF*KKCLFF Trigger: GAAGAAGAGACACTTTTTTCAAAACTTGGGATCCAT...GACAACTTCCTGACAGGTTCCCTCTGCATGCTGGGAAGTCATGTTTTGCAGCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| 3UTR CAA 72 bp | CCTAATAGAACATCTGCACATCAAGAGAAGCTAGGCTaGAGGTATCTTATGGCTTCAAAGGCACGAGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: PNRTSAHQEKLG*RYLMASKARVM Trigger: CATGACTCGTGCCTTTGAAGCCATAAGATACCTCAAGCCTAGCTTCTCTTGATGTGCAGATGTTCTATTAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS-3UTR TCA 90 bp | AGGAAGTTGTCCCAGTGCACACAAGGAAGAGAGGCTCACCATTTGAATAAAACACAGTTTGGAATCCGATaGCAGATTGTTGTAGGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: RKLSQCTQGREAHHLNKTQFGIR*QIVVGV Trigger: TACACCTACAACAATCTGTCATCGGATTCCAAACTG...TGTTTTATTCAAATGGTGAGCCTCTCTTCCTTGTGTGCACTGGGACAACTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
||
| 3UTR CAA 72 bp | GCATTTAGCCCTATGGTCCGAACAAGTGGAGTCAAGTaGAGAGATAAGGCTTATCATTTATGCTCAGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: AFSPMVRTSGVK*RDKAYHLCSGV Trigger: AACTCCTGAGCATAAATGATAAGCCTTATCTCTCAACTTGACTCCACTTGTTCGGACCATAGGGCTAAATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
||
| CDS-3UTR TCA 90 bp | CATTTGAATAAAACACAGAATGTGGGAAAGAGACCAGCTTTCCCTGGAGAGAGTAGAGCATTGAAAATGTaGTTCTGGAAGGTGAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: HLNKTQNVGKRPAFPGESRALKM*FWKVNR Trigger: TCTGTTCACCTTCCAGAATCACATTTTCAATGCTCT...ACTCTCTCCAGGGAAAGCTGGTCTCTTTCCCACATTCTGTGTTTTATTCAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
||
| CDS-3UTR GCA 90 bp | AGAAATCGTTCTTCATCTCCCTCAAAAGTAAACCCATTACATCTTGGGCTCCCAAAATTTGGTCAACAGTaGGGTAACAACTGCATATGC | + |
|
Preference number: 4 (lower is better) Translates to: RNRSSSPSKVNPLHLGLPKFGQQ*GNNCIC Trigger: GCATATGCAGTTGTTACCGCACTGTTGACCAAATTT...TGGGAGCCCAAGATGTAATGGGTTTACTTTTGAGGGAGATGAAGAACGATTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
||
| CDS-3UTR GCA 90 bp | CTAAATGTCATTAGCTCTGTTCTTTTTGCCCCTCTATTGCCAATCAGTTACAGAAGAGGGGGTAAATGTTaGAGGCTCTGGCAACAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LNVISSVLFAPLLPISYRRGGKC*RLWQQK Trigger: TTTTTGTTGCCAGAGCCTGCAACATTTACCCCCTCT...TCTGTAACTGATTGGCAATAGAGGGGCAAAAAGAACAGAGCTAATGACATTTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
||
| CDS-3UTR CCA 90 bp | AGAAATCGTTCTTCATCTCCCTCAAAAGTAAACCCATTACATCTTGGGCTCCCAGTTGAAGAAGATTTCTaGGTCAAACGTCATCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RNRSSSPSKVNPLHLGLPVEEDF*VKRHLL Trigger: GAGAAGATGACGTTTGACCCAGAAATCTTCTTCAAC...TGGGAGCCCAAGATGTAATGGGTTTACTTTTGAGGGAGATGAAGAACGATTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
||
| CDS TCA 90 bp | CCACGTCATCCTCTTTCAGTTGTTCCCCATAGGCCTGCGGACTGGTaGGCAGCCTGGAGACTGGGCCACACCACGCTGGCAAGGTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PRHPLSVVPHRPADW*AAWRLGHTTLARWW Trigger: CCACCACCTTGCCAGCGTGGTGTGGCCCAGTCTCCAGGCTGCTCACCAGTCCGCAGGCCTATGGGGAACAACTGAAAGAGGATGACGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
||
| CDS CCA 90 bp | CTGGAGTCTGGCCTGAAGACTTCTGGTCCAGAGCTAGCTTGGTGGTaGGACTGCTGGGTGAAGGGCTCTGCTCCTGGTAATTCATGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LESGLKTSGPELAWW*DCWVKGSAPGNSWP Trigger: TGGCCATGAATTACCAGGAGCAGAGCCCTTCACCCAGCAGTCCCACCACCAAGCTAGCTCTGGACCAGAAGTCTTCAGGCCAGACTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
||
| CDS CCA 90 bp | TGCCTGGAGTCTGGCCTGAAGACTTCTGGTCCAGAGCTAGCTTGGTaGTGGGACTGCTGGGTGAAGGGCTCTGCTCCTGGTAATTCATGG | + |
|
Preference number: 5 (lower is better) Translates to: CLESGLKTSGPELAW*WDCWVKGSAPGNSW Trigger: CCATGAATTACCAGGAGCAGAGCCCTTCACCCAGCAGTCCCACCACCAAGCTAGCTCTGGACCAGAAGTCTTCAGGCCAGACTCCAGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS CCA 90 bp | CCTTGCCTGGAGTCTGGCCTGAAGACTTCTGGTCCAGAGCTAGCTTaGTGGTGGGACTGCTGGGTGAAGGGCTCTGCTCCTGGTAATTCA | + |
|
Preference number: 5 (lower is better) Translates to: PCLESGLKTSGPELA*WWDCWVKGSAPGNS Trigger: TGAATTACCAGGAGCAGAGCCCTTCACCCAGCAGTCCCACCACCAAGCTAGCTCTGGACCAGAAGTCTTCAGGCCAGACTCCAGGCAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS GCA 90 bp | ATGCGGAGCCCATTGCAAAGGAGCCGGCAAAGATCCCTAGGAAATTaGCCACGGATTGGAAGAACGCTGCCGTGTCAAACGCGTTGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: MRSPLQRSRQRSLGN*PRIGRTLPCQTRWD Trigger: ATCCCAACGCGTTTGACACGGCAGCGTTCTTCCAATCCGTGGGCAATTTCCTAGGGATCTTTGCCGGCTCCTTTGCAATGGGCTCCGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS GCA 90 bp | GATCATAGCCTCCCAGGCCGAGATCTCCCTCGTAGATATTCTCCTTaGCTGGAGTCTGGCCTGAAGACTTCTGGTCCAGAGCTAGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: DHSLPGRDLPRRYSP*LESGLKTSGPELAW Trigger: CCAAGCTAGCTCTGGACCAGAAGTCTTCAGGCCAGACTCCAGGCAAGGAGAATATCTACGAGGGAGATCTCGGCCTGGGAGGCTATGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS TCA 90 bp | AAGAACACAAGGAGCAGTGTGGTGGTGAACATCATCTGTTTGGGCTaGGATTCCGTGTTGCGGATGGCCAGGGCGAAGGCAATGGCACCT | + |
|
Preference number: 5 (lower is better) Translates to: KNTRSSVVVNIICLG*DSVLRMARAKAMAP Trigger: AGGTGCCATTGCCTTCGCCCTGGCCATCCGCAACACGGAATCTCAGCCCAAACAGATGATGTTCACCACCACACTGCTCCTTGTGTTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS GCA 90 bp | CTCCAGCATCGGGAACTCACGGAGCTTGGTAAATTTGGTCAACAGTaGGGTAACAACTGCATATGCGGAGCCCATTGCAAAGGAGCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: LQHRELTELGKFGQQ*GNNCICGAHCKGAG Trigger: GCCGGCTCCTTTGCAATGGGCTCCGCATATGCAGTTGTTACCGCACTGTTGACCAAATTTACCAAGCTCCGTGAGTTCCCGATGCTGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS CCA 90 bp | ATTGCAAAGGAGCCGGCAAAGATCCCTAGGAAATTGCCCACGGATTaGAAGAACGCTGCCGTGTCAAACGCGTTGGGATTCTCCTTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: IAKEPAKIPRKLPTD*KNAAVSNALGFSLG Trigger: TCCCAAGGAGAATCCCAACGCGTTTGACACGGCAGCGTTCTTCCAATCCGTGGGCAATTTCCTAGGGATCTTTGCCGGCTCCTTTGCAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS-3UTR CAA 90 bp | ACAGATATTGGTGGAAAAGGTGAGGGCTCCTGCACAATCCTCCAACCCCATGTGGCCGTGTCAAACGCGTaGGGATTCTCCTTGGGACTA | + |
|
Preference number: 5 (lower is better) Translates to: TDIGGKGEGSCTILQPHVAVSNA*GFSLGL Trigger: TAGTCCCAAGGAGAATCCCAACGCGTTTGACACGGC...CACATGGGGTTGGAGGATTGTGCAGGAGCCCTCACCTTTTCCACCAATATCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS CCA 90 bp | TCTCCAAACAGCAGTGTGTACAGGTCTGGGTCCACGTGGAGTTCATaGAAAATGGCCAGCACTGTCACTGGATCTGTAGCAGACATCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SPNSSVYRSGSTWSS*KMASTVTGSVADIS Trigger: ACTGATGTCTGCTACAGATCCAGTGACAGTGCTGGCCATTTTCCATGAACTCCACGTGGACCCAGACCTGTACACACTGCTGTTTGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS-3UTR CAA 90 bp | CTAAGGCCTAAGAAGCACTCAGTGAAGCATGCATTAGTTTTAGCCTTTGGGCCTCAGTATGGCGTTGCCTaGGTGGGGGCTGATATTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LRPKKHSVKHALVLAFGPQYGVA*VGADIV Trigger: CACAATATCAGCCCCCACCAAGGCAACGCCATACTG...AGGCCCAAAGGCTAAAACTAATGCATGCTTCACTGAGTGCTTCTTAGGCCTTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS-3UTR CAA 90 bp | GGAGAGAGCGCCAGCAAGGACAACAAGGCCCCCAATTCATGTGAATTCTCCAAAGGAGGCAGCAAAACGTaGAAGAAGATTTCTGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GESASKDNKAPNSCEFSKGGSKT*KKISGS Trigger: TGACCCAGAAATCTTCTTCAACGTTTTGCTGCCTCC...TTTGGAGAATTCACATGAATTGGGGGCCTTGTTGTCCTTGCTGGCGCTCTCTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS TCA 90 bp | GTGAAGGGCTCTGCTCCTGGTAATTCATGGCCAGTTCATCTTGGTTaGCGATACATTCCACGTCATCCTCTTTCAGTTGTTCCCCATAGG | + |
|
Preference number: 5 (lower is better) Translates to: VKGSAPGNSWPVHLG*RYIPRHPLSVVPHR Trigger: CCTATGGGGAACAACTGAAAGAGGATGACGTGGAATGTATCGTCAACCAAGATGAACTGGCCATGAATTACCAGGAGCAGAGCCCTTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS CCA 90 bp | TGCATGAAATATGATGGGAGGCAGCAAAACGTTGAAGAAGATTTCTaGGTCAAACGTCATCTTCTCCAGTATGGCGTTGCCTTGGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: CMKYDGRQQNVEEDF*VKRHLLQYGVALVG Trigger: CCCCACCAAGGCAACGCCATACTGGAGAAGATGACGTTTGACCCAGAAATCTTCTTCAACGTTTTGCTGCCTCCCATCATATTTCATGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS-3UTR CAA 90 bp | TTGCCCCTCTATTGCCAATCAGTTACAGATATTGGTGGAAAAGGTGAGGGCTCCGGGAACTCACGGAGCTaGGTAAATTTGGTCAACAGT | + |
|
Preference number: 5 (lower is better) Translates to: LPLYCQSVTDIGGKGEGSGNSRS*VNLVNS Trigger: ACTGTTGACCAAATTTACCAAGCTCCGTGAGTTCCC...GGAGCCCTCACCTTTTCCACCAATATCTGTAACTGATTGGCAATAGAGGGGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS-3UTR CAA 90 bp | CTAAGGCCTAAGAAGCACTCAGTGAAGCATGCATTAGTTTTAGCCTTTGGGCCTACTTGGTCGGTGATGTaGACTAGTAGAGTTGATGGG | + |
|
Preference number: 5 (lower is better) Translates to: LRPKKHSVKHALVLAFGPTWSVM*TSRVDG Trigger: CCCATCAACTCTACTAGTCAACATCACCGACCAAGT...AGGCCCAAAGGCTAAAACTAATGCATGCTTCACTGAGTGCTTCTTAGGCCTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS-3UTR CAA 90 bp | CGAACAAGTGGAGTCAAGTTGAGAGATAAGGCTTATCATTTATGCTCAGGAGTTGAAATTGCCCACGGATaGGAAGAACGCTGCCGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: RTSGVKLRDKAYHLCSGVEIAHG*EERCRV Trigger: GACACGGCAGCGTTCTTCCAATCCGTGGGCAATTTC...AACTCCTGAGCATAAATGATAAGCCTTATCTCTCAACTTGACTCCACTTGTTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS-3UTR CAA 90 bp | ATTGCCAATCAGTTACAGATATTGGTGGAAAAGGTGAGGGCTCCTGCACAATCCGCCAGTTCATCTTGGTaGACGATACATTCCACGTCA | + |
|
Preference number: 5 (lower is better) Translates to: IANQLQILVEKVRAPAQSASSSW*TIHSTS Trigger: TGACGTGGAATGTATCGTCAACCAAGATGAACTGGC...GGATTGTGCAGGAGCCCTCACCTTTTCCACCAATATCTGTAACTGATTGGCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS-3UTR CAA 90 bp | TCTTCATCTCCCTCAAAAGTAAACCCATTACATCTTGGGCTCCCAAGTCTGAAGAAGATCCCTAGGAAATaGCCCACGGATTGGAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SSSPSKVNPLHLGLPSLKKIPRK*PTDWKN Trigger: GTTCTTCCAATCCGTGGGCAATTTCCTAGGGATCTT...CTTCAGACTTGGGAGCCCAAGATGTAATGGGTTTACTTTTGAGGGAGATGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS-3UTR CAA 90 bp | CCTTGGCTGTTGGCATTCCTCAGTGGTCTTGTGTTACATGTGATTAAGTCTGCACTCTGGCAACAAAAATaGCTAGAAAGGCTCCGAGTA | + |
|
Preference number: 5 (lower is better) Translates to: PWLLAFLSGLVLHVIKSALWQQK*LERLRV Trigger: TACTCGGAGCCTTTCTAGCAATTTTTGTTGCCAGAG...TGCAGACTTAATCACATGTAACACAAGACCACTGAGGAATGCCAACAGCCAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS-3UTR CAA 90 bp | CTAAGGCCTAAGAAGCACTCAGTGAAGCATGCATTAGTTTTAGCCTTTGGGCCTTTTTGTCCAACTTATTaGCTTCCTGCTGTGAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LRPKKHSVKHALVLAFGPFCPTY*LPAVRR Trigger: CCTCCTCACAGCAGGAAGCAAATAAGTTGGACAAAA...AGGCCCAAAGGCTAAAACTAATGCATGCTTCACTGAGTGCTTCTTAGGCCTTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS-3UTR CAA 90 bp | CCAAGTCTGAAGCCTGCTCTTTGGAGCCTAATAGAACATCTGCACATCAAGAGACTGATATTGTGCTGGTaGATCTCTCTCTGGTACTTA | + |
|
Preference number: 5 (lower is better) Translates to: PSLKPALWSLIEHLHIKRLILCW*ISLWYL Trigger: TAAGTACCAGAGAGAGATCAACCAGCACAATATCAG...TCTCTTGATGTGCAGATGTTCTATTAGGCTCCAAAGAGCAGGCTTCAGACTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS TCA 90 bp | TTAGGATGGGTTTCAGGTATTTGTGGTCAAATCCATACCACATTCTaGAGAGCTGTGCACTCTCTGTCTTCGTCATGTTTTTGTCCAACT | + |
|
Preference number: 5 (lower is better) Translates to: LGWVSGICGQIHTTF*RAVHSLSSSCFCPT Trigger: AGTTGGACAAAAACATGACGAAGACAGAGAGTGCACAGCTCTTCAGAATGTGGTATGGATTTGACCACAAATACCTGAAACCCATCCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS GCA 90 bp | TTTCAGGTATTTGTGGTCAAATCCATACCACATTCTGAAGAGCTGTaGACTCTCTGTCTTCGTCATGTTTTTGTCCAACTTATTTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FQVFVVKSIPHSEEL*TLCLRHVFVQLICF Trigger: GAAGCAAATAAGTTGGACAAAAACATGACGAAGACAGAGAGTGCACAGCTCTTCAGAATGTGGTATGGATTTGACCACAAATACCTGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS CCA 72 bp | CCCATAGGCCTGCGGACTGGTGAGCAGCCTGGAGACTaGGCCACACCACGCTGGCAAGGTGGTGGTCAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: PIGLRTGEQPGD*ATPRWQGGGQW Trigger: CCACTGACCACCACCTTGCCAGCGTGGTGTGGCCCAGTCTCCAGGCTGCTCACCAGTCCGCAGGCCTATGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS CCA 72 bp | GCAGCCTGGAGACTGGGCCACACCACGCTGGCAAGGTaGTGGTCAGTGGAGGGCCTGAGTGTGTTAGGATGG | + |
|
Preference number: 6 (lower is better) Translates to: AAWRLGHTTLAR*WSVEGLSVLGW Trigger: CCATCCTAACACACTCAGGCCCTCCACTGACCACCACCTTGCCAGCGTGGTGTGGCCCAGTCTCCAGGCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS TCA 72 bp | CCTCTTTCAGTTGTTCCCCATAGGCCTGCGGACTGGTaGGCAGCCTGGAGACTGGGCCACACCACGCTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: PLSVVPHRPADW*AAWRLGHTTLA Trigger: TGCCAGCGTGGTGTGGCCCAGTCTCCAGGCTGCTCACCAGTCCGCAGGCCTATGGGGAACAACTGAAAGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS CCA 72 bp | GCCTGGAGACTGGGCCACACCACGCTGGCAAGGTGGTaGTCAGTGGAGGGCCTGAGTGTGTTAGGATGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: AWRLGHTTLARW*SVEGLSVLGWV Trigger: AACCCATCCTAACACACTCAGGCCCTCCACTGACCACCACCTTGCCAGCGTGGTGTGGCCCAGTCTCCAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS CCA 72 bp | TCTGGCCTGAAGACTTCTGGTCCAGAGCTAGCTTGGTaGTGGGACTGCTGGGTGAAGGGCTCTGCTCCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: SGLKTSGPELAW*WDCWVKGSAPG Trigger: ACCAGGAGCAGAGCCCTTCACCCAGCAGTCCCACCACCAAGCTAGCTCTGGACCAGAAGTCTTCAGGCCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS TCA 72 bp | AGGAGCAGTGTGGTGGTGAACATCATCTGTTTGGGCTaGGATTCCGTGTTGCGGATGGCCAGGGCGAAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: RSSVVVNIICLG*DSVLRMARAKA Trigger: TGCCTTCGCCCTGGCCATCCGCAACACGGAATCTCAGCCCAAACAGATGATGTTCACCACCACACTGCTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS GCA 72 bp | CTCCCAGGCCGAGATCTCCCTCGTAGATATTCTCCTTaGCTGGAGTCTGGCCTGAAGACTTCTGGTCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: LPGRDLPRRYSP*LESGLKTSGPE Trigger: CTCTGGACCAGAAGTCTTCAGGCCAGACTCCAGGCAAGGAGAATATCTACGAGGGAGATCTCGGCCTGGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS CCA 72 bp | ACATCATCTGTTTGGGCTGAGATTCCGTGTTGCGGATaGCCAGGGCGAAGGCAATGGCACCTCGCAAACCTG | + |
|
Preference number: 6 (lower is better) Translates to: TSSVWAEIPCCG*PGRRQWHLANL Trigger: CAGGTTTGCGAGGTGCCATTGCCTTCGCCCTGGCCATCCGCAACACGGAATCTCAGCCCAAACAGATGATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS CAA 90 bp | TATGCGGAGCCCATTGCAAAGGAGCCGGCAAAGATCCCTAGGAAATaGCCCACGGATTGGAAGAACGCTGCCGTGTCAAACGCGTTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: YAEPIAKEPAKIPRK*PTDWKNAAVSNALG Trigger: TCCCAACGCGTTTGACACGGCAGCGTTCTTCCAATCCGTGGGCAATTTCCTAGGGATCTTTGCCGGCTCCTTTGCAATGGGCTCCGCATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS CCA 72 bp | GAGCCGGCAAAGATCCCTAGGAAATTGCCCACGGATTaGAAGAACGCTGCCGTGTCAAACGCGTTGGGATTC | + |
|
Preference number: 6 (lower is better) Translates to: EPAKIPRKLPTD*KNAAVSNALGF Trigger: GAATCCCAACGCGTTTGACACGGCAGCGTTCTTCCAATCCGTGGGCAATTTCCTAGGGATCTTTGCCGGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS CCA 72 bp | ATATTCTCCTTGCCTGGAGTCTGGCCTGAAGACTTCTaGTCCAGAGCTAGCTTGGTGGTGGGACTGCTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: IFSLPGVWPEDF*SRASLVVGLLG Trigger: ACCCAGCAGTCCCACCACCAAGCTAGCTCTGGACCAGAAGTCTTCAGGCCAGACTCCAGGCAAGGAGAATAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS GCA 72 bp | CCATTGCAAAGGAGCCGGCAAAGATCCCTAGGAAATTaGCCACGGATTGGAAGAACGCTGCCGTGTCAAACG | + |
|
Preference number: 6 (lower is better) Translates to: PLQRSRQRSLGN*PRIGRTLPCQT Trigger: CGTTTGACACGGCAGCGTTCTTCCAATCCGTGGGCAATTTCCTAGGGATCTTTGCCGGCTCCTTTGCAATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS CAA 72 bp | CCCATTGCAAAGGAGCCGGCAAAGATCCCTAGGAAATaGCCCACGGATTGGAAGAACGCTGCCGTGTCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: PIAKEPAKIPRK*PTDWKNAAVSN Trigger: GTTTGACACGGCAGCGTTCTTCCAATCCGTGGGCAATTTCCTAGGGATCTTTGCCGGCTCCTTTGCAATGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS CCA 72 bp | AAACAGTCAGTGAAGTGGAAGTCTCCGCTCTTCAGCTaGCCAGCATGCACCATGGCTTTCACAAAGCCGTAC | + |
|
Preference number: 6 (lower is better) Translates to: KQSVKWKSPLFS*PACTMAFTKPY Trigger: GTACGGCTTTGTGAAAGCCATGGTGCATGCTGGCCAGCTGAAGAGCGGAGACTTCCACTTCACTGACTGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS CCA 72 bp | AGCAGTGTGTACAGGTCTGGGTCCACGTGGAGTTCATaGAAAATGGCCAGCACTGTCACTGGATCTGTAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SSVYRSGSTWSS*KMASTVTGSVA Trigger: TGCTACAGATCCAGTGACAGTGCTGGCCATTTTCCATGAACTCCACGTGGACCCAGACCTGTACACACTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS CCA 72 bp | TCTCCAAACAGCAGTGTGTACAGGTCTGGGTCCACGTaGAGTTCATGGAAAATGGCCAGCACTGTCACTGGA | + |
|
Preference number: 6 (lower is better) Translates to: SPNSSVYRSGST*SSWKMASTVTG Trigger: TCCAGTGACAGTGCTGGCCATTTTCCATGAACTCCACGTGGACCCAGACCTGTACACACTGCTGTTTGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS CCA 72 bp | TCAAACGTCATCTTCTCCAGTATGGCGTTGCCTTGGTaGGGGCTGATATTGTGCTGGTTGATCTCTCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SNVIFSSMALPW*GLILCWLISLW Trigger: CCAGAGAGAGATCAACCAGCACAATATCAGCCCCCACCAAGGCAACGCCATACTGGAGAAGATGACGTTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS CAA 72 bp | GTCTCCAGCATCGGGAACTCACGGAGCTTGGTAAATTaGGTCAACAGTGCGGTAACAACTGCATATGCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: VSSIGNSRSLVN*VNSAVTTAYAE Trigger: CTCCGCATATGCAGTTGTTACCGCACTGTTGACCAAATTTACCAAGCTCCGTGAGTTCCCGATGCTGGAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS GCA 72 bp | GAGCTTGGTAAATTTGGTCAACAGTGCGGTAACAACTaGATATGCGGAGCCCATTGCAAAGGAGCCGGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: ELGKFGQQCGNN*ICGAHCKGAGK Trigger: TTTGCCGGCTCCTTTGCAATGGGCTCCGCATATGCAGTTGTTACCGCACTGTTGACCAAATTTACCAAGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS CAA 90 bp | GAAGATTTCTGGGTCAAACGTCATCTTCTCCAGTATGGCGTTGCCTaGGTGGGGGCTGATATTGTGCTGGTTGATCTCTCTCTGGTACTT | + |
|
Preference number: 6 (lower is better) Translates to: EDFWVKRHLLQYGVA*VGADIVLVDLSLVL Trigger: AAGTACCAGAGAGAGATCAACCAGCACAATATCAGCCCCCACCAAGGCAACGCCATACTGGAGAAGATGACGTTTGACCCAGAAATCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS CAA 90 bp | TTGAAGAAGATTTCTGGGTCAAACGTCATCTTCTCCAGTATGGCGTaGCCTTGGTGGGGGCTGATATTGTGCTGGTTGATCTCTCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LKKISGSNVIFSSMA*PWWGLILCWLISLW Trigger: CCAGAGAGAGATCAACCAGCACAATATCAGCCCCCACCAAGGCAACGCCATACTGGAGAAGATGACGTTTGACCCAGAAATCTTCTTCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS CAA 72 bp | AGGGCTCTGCTCCTGGTAATTCATGGCCAGTTCATCTaGGTTGACGATACATTCCACGTCATCCTCTTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: RALLLVIHGQFI*VDDTFHVILFQ Trigger: CTGAAAGAGGATGACGTGGAATGTATCGTCAACCAAGATGAACTGGCCATGAATTACCAGGAGCAGAGCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS TCA 72 bp | TCTGCTCCTGGTAATTCATGGCCAGTTCATCTTGGTTaGCGATACATTCCACGTCATCCTCTTTCAGTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: SAPGNSWPVHLG*RYIPRHPLSVV Trigger: AACAACTGAAAGAGGATGACGTGGAATGTATCGTCAACCAAGATGAACTGGCCATGAATTACCAGGAGCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS TCA 72 bp | GTTTCAGGTATTTGTGGTCAAATCCATACCACATTCTaGAGAGCTGTGCACTCTCTGTCTTCGTCATGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: VSGICGQIHTTF*RAVHSLSSSCF Trigger: AAAACATGACGAAGACAGAGAGTGCACAGCTCTTCAGAATGTGGTATGGATTTGACCACAAATACCTGAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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| CDS GCA 72 bp | TTTGTGGTCAAATCCATACCACATTCTGAAGAGCTGTaGACTCTCTGTCTTCGTCATGTTTTTGTCCAACTT | + |
|
Preference number: 6 (lower is better) Translates to: FVVKSIPHSEEL*TLCLRHVFVQL Trigger: AAGTTGGACAAAAACATGACGAAGACAGAGAGTGCACAGCTCTTCAGAATGTGGTATGGATTTGACCACAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033463.10 |
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