Pregenerated sensors for SLC9A8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039463Ensembl transcript IDs: ENSMUST00000047815.13, ENSMUST00000073873.5, ENSMUST00000109218.7
Found 309 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | TGCATGGGTGTGTGTTTCTGTGACCCAAAGTCCCCGGAATCCAAGTaGCCCAAGTGGAGAGCACGGCCCCAGTGCCCTGGAGAGCTGGGG | + |
Preference number: 1 (lower is better) Translates to: CMGVCFCDPKSPESK*PKWRARPQCPGELG Trigger: CCCCAGCTCTCCAGGGCACTGGGGCCGTGCTCTCCACTTGGGCCACTTGGATTCCGGGGACTTTGGGTCACAGAAACACACACCCATGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR TCA 90 bp | ATCTGCACACCGAGCCCCTCAGCCTGCCAAGCTGCTAGACATGGCTaGCTGGAGGGGCCTGTGACCACAGCACTGCAGGAAGCAAGTCAC | + |
Preference number: 1 (lower is better) Translates to: ICTPSPSACQAARHG*LEGPVTTALQEASH Trigger: GTGACTTGCTTCCTGCAGTGCTGTGGTCACAGGCCCCTCCAGTCAGCCATGTCTAGCAGCTTGGCAGGCTGAGGGGCTCGGTGTGCAGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR GCA 90 bp | TGGCCTGGCAGAGAAGCAGGAAGGAGGCTGGTAACTGCCGTCCTCTaGGGGCCATCTTGTGTTCTGAGGAGGCTGAGTGAGGCACTGTGG | + |
Preference number: 1 (lower is better) Translates to: WPGREAGRRLVTAVL*GPSCVLRRLSEALW Trigger: CCACAGTGCCTCACTCAGCCTCCTCAGAACACAAGATGGCCCGCAGAGGACGGCAGTTACCAGCCTCCTTCCTGCTTCTCTGCCAGGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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3UTR CCA 90 bp | CCTGCCAGCTGCTGCTCCAGAGGTGAGGAAGGCATGGCCCAGGCATaGTGTGAGATGAGCAAGCAGCCTTCCAAGGCTTTCTCTGTGGCC | + |
Preference number: 1 (lower is better) Translates to: PASCCSRGEEGMAQA*CEMSKQPSKAFSVA Trigger: GGCCACAGAGAAAGCCTTGGAAGGCTGCTTGCTCATCTCACACCATGCCTGGGCCATGCCTTCCTCACCTCTGGAGCAGCAGCTGGCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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3UTR TCA 90 bp | CCTCAGCCTGCCAAGCTGCTAGACATGGCTGACTGGAGGGGCCTGTaGCCACAGCACTGCAGGAAGCAAGTCACTGATCCCAAGACCTGG | + |
Preference number: 1 (lower is better) Translates to: PQPAKLLDMADWRGL*PQHCRKQVTDPKTW Trigger: CCAGGTCTTGGGATCAGTGACTTGCTTCCTGCAGTGCTGTGGTCACAGGCCCCTCCAGTCAGCCATGTCTAGCAGCTTGGCAGGCTGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR TCA 90 bp | CTGGGAAGCTGGCTTCAGGTCTCAGCTAGAAGGAGGGGCCAAGAATaGTGGACCAGGGACAGGAGACCTGGAGACAAGGGGCCAACGGAA | + |
Preference number: 1 (lower is better) Translates to: LGSWLQVSARRRGQE*WTRDRRPGDKGPTE Trigger: TTCCGTTGGCCCCTTGTCTCCAGGTCTCCTGTCCCTGGTCCATCATTCTTGGCCCCTCCTTCTAGCTGAGACCTGAAGCCAGCTTCCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR CCA 90 bp | TGGTGTGAGATGAGCAAGCAGCCTTCCAAGGCTTTCTCTGTGGCCTaGCAGAGAAGCAGGAAGGAGGCTGGTAACTGCCGTCCTCTGCGG | + |
Preference number: 1 (lower is better) Translates to: WCEMSKQPSKAFSVA*QRSRKEAGNCRPLR Trigger: CCGCAGAGGACGGCAGTTACCAGCCTCCTTCCTGCTTCTCTGCCAGGCCACAGAGAAAGCCTTGGAAGGCTGCTTGCTCATCTCACACCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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3UTR CCA 90 bp | GGGAAGTGCCAGGACCATGTCGAGAAAGTCCTTCAGCCTCTCTCTTaGGGACACAGACGCAGACCAGGGGCTGTTCTCTCTTGGCCTTGG | + |
Preference number: 1 (lower is better) Translates to: GKCQDHVEKVLQPLS*GHRRRPGAVLSWPW Trigger: CCAAGGCCAAGAGAGAACAGCCCCTGGTCTGCGTCTGTGTCCCCAAGAGAGAGGCTGAAGGACTTTCTCGACATGGTCCTGGCACTTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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3UTR CCA 90 bp | AGGGTGCTAAGCTTATGTCCTCCAGCAAGAGGCAGAGGCACCTCCTaGTGCTCAGCAGAGCTGGTGCTCAGTGAAGCTGGTGTGCAGAGC | + |
Preference number: 1 (lower is better) Translates to: RVLSLCPPARGRGTS*CSAELVLSEAGVQS Trigger: GCTCTGCACACCAGCTTCACTGAGCACCAGCTCTGCTGAGCACCAGGAGGTGCCTCTGCCTCTTGCTGGAGGACATAAGCTTAGCACCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR GCA 90 bp | GCACCTCCTGGTGCTCAGCAGAGCTGGTGCTCAGTGAAGCTGGTGTaGAGAGCTAACATTCTCACCAAGCTCTGGGAAGCTGGCTTCAGG | + |
Preference number: 1 (lower is better) Translates to: APPGAQQSWCSVKLV*RANILTKLWEAGFR Trigger: CCTGAAGCCAGCTTCCCAGAGCTTGGTGAGAATGTTAGCTCTGCACACCAGCTTCACTGAGCACCAGCTCTGCTGAGCACCAGGAGGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR CCA 90 bp | GTCCTCCAGCAAGAGGCAGAGGCACCTCCTGGTGCTCAGCAGAGCTaGTGCTCAGTGAAGCTGGTGTGCAGAGCTAACATTCTCACCAAG | + |
Preference number: 1 (lower is better) Translates to: VLQQEAEAPPGAQQS*CSVKLVCRANILTK Trigger: CTTGGTGAGAATGTTAGCTCTGCACACCAGCTTCACTGAGCACCAGCTCTGCTGAGCACCAGGAGGTGCCTCTGCCTCTTGCTGGAGGAC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR GCA 90 bp | GTGAAGAGAGCCTTCAGTACAACTCTACCACTCACCAGCCTGTGCTaGCATGGCTCTAAAACAGGGCCACAGCCACCAAGCCTGGGTGAG | + |
Preference number: 1 (lower is better) Translates to: VKRAFSTTLPLTSLC*HGSKTGPQPPSLGE Trigger: CTCACCCAGGCTTGGTGGCTGTGGCCCTGTTTTAGAGCCATGGCAGCACAGGCTGGTGAGTGGTAGAGTTGTACTGAAGGCTCTCTTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR CCA 90 bp | TTCATTGTGCCCACAGGGGCCATAGGAGCCTTCCCAAAAGCAGGCTaGGAAGTGCCAGGACCATGTCGAGAAAGTCCTTCAGCCTCTCTC | + |
Preference number: 1 (lower is better) Translates to: FIVPTGAIGAFPKAG*EVPGPCRESPSASL Trigger: GAGAGAGGCTGAAGGACTTTCTCGACATGGTCCTGGCACTTCCCAGCCTGCTTTTGGGAAGGCTCCTATGGCCCCTGTGGGCACAATGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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3UTR CCA 90 bp | GGAGGGCAGAGGACCCAAGCTCCAGAAACTGGTAAAAGACAAAGCTaGGCTCTGACCAGCAGCTGGGTGGAAGGAGCTTCACATTACAGG | + |
Preference number: 1 (lower is better) Translates to: GGQRTQAPETGKRQS*ALTSSWVEGASHYR Trigger: CCTGTAATGTGAAGCTCCTTCCACCCAGCTGCTGGTCAGAGCCCAGCTTTGTCTTTTACCAGTTTCTGGAGCTTGGGTCCTCTGCCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR CCA 90 bp | CCAGGCCCTTCCCAAAGCAGCAAAGGCCTCAGGGACCTTGAACAATaGCTCCCGGCCAGTCTCCTTAAATCACAACAGAAAACTAGGGCT | + |
Preference number: 1 (lower is better) Translates to: PGPSQSSKGLRDLEQ*LPASLLKSQQKTRA Trigger: AGCCCTAGTTTTCTGTTGTGATTTAAGGAGACTGGCCGGGAGCCATTGTTCAAGGTCCCTGAGGCCTTTGCTGCTTTGGGAAGGGCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR CCA 90 bp | TGCTCAGTGAAGCTGGTGTGCAGAGCTAACATTCTCACCAAGCTCTaGGAAGCTGGCTTCAGGTCTCAGCTAGAAGGAGGGGCCAAGAAT | + |
Preference number: 1 (lower is better) Translates to: CSVKLVCRANILTKL*EAGFRSQLEGGAKN Trigger: ATTCTTGGCCCCTCCTTCTAGCTGAGACCTGAAGCCAGCTTCCCAGAGCTTGGTGAGAATGTTAGCTCTGCACACCAGCTTCACTGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR CCA 90 bp | ATGTCCCTCCCTACTCTTAAGTATATTAGCTTCTGTGTGCCCAGCTaGCCTGCCCCTTGGCCTAGACCTGAAATGCAACTGGGGCAGCAT | + |
Preference number: 1 (lower is better) Translates to: MSLPTLKYISFCVPS*PAPWPRPEMQLGQH Trigger: ATGCTGCCCCAGTTGCATTTCAGGTCTAGGCCAAGGGGCAGGCCAGCTGGGCACACAGAAGCTAATATACTTAAGAGTAGGGAGGGACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR TCA 90 bp | AGAGGACCCAAGCTCCAGAAACTGGTAAAAGACAAAGCTGGGCTCTaGCCAGCAGCTGGGTGGAAGGAGCTTCACATTACAGGGTCTAGA | + |
Preference number: 1 (lower is better) Translates to: RGPKLQKLVKDKAGL*PAAGWKELHITGSR Trigger: TCTAGACCCTGTAATGTGAAGCTCCTTCCACCCAGCTGCTGGTCAGAGCCCAGCTTTGTCTTTTACCAGTTTCTGGAGCTTGGGTCCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR TCA 90 bp | GAAGCAAACTGCATGTTTCCAACTTCACCGACTTCTGCAGCACAGTaGGGTGGCAGGGCATTAGAGACCTGGCTGTCCTTCCCAACATCA | + |
Preference number: 1 (lower is better) Translates to: EANCMFPTSPTSAAQ*GGRALETWLSFPTS Trigger: TGATGTTGGGAAGGACAGCCAGGTCTCTAATGCCCTGCCACCTCACTGTGCTGCAGAAGTCGGTGAAGTTGGAAACATGCAGTTTGCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR GCA 90 bp | GTCTCTCAGGTAAAACGTCTGAAAAAGGAAAGGCATCTAGCACTTTaGTCCCTGGCCAATGGCTCTGAAGGGCTGGACAGTCTCTCAGGG | + |
Preference number: 1 (lower is better) Translates to: VSQVKRLKKERHLAL*SLANGSEGLDSLSG Trigger: CCCTGAGAGACTGTCCAGCCCTTCAGAGCCATTGGCCAGGGAGCAAAGTGCTAGATGCCTTTCCTTTTTCAGACGTTTTACCTGAGAGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR CCA 90 bp | AAACTGCATGTTTCCAACTTCACCGACTTCTGCAGCACAGTGAGGTaGCAGGGCATTAGAGACCTGGCTGTCCTTCCCAACATCAGAACC | + |
Preference number: 1 (lower is better) Translates to: KLHVSNFTDFCSTVR*QGIRDLAVLPNIRT Trigger: GGTTCTGATGTTGGGAAGGACAGCCAGGTCTCTAATGCCCTGCCACCTCACTGTGCTGCAGAAGTCGGTGAAGTTGGAAACATGCAGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR CCA 90 bp | AGCAAGTCACTGATCCCAAGACCTGGCTTGGAAATAGTGCAGGGATaGACCACCAGCAAGTACAGGGTGGCATGCTTACTGGCTAAAGTG | + |
Preference number: 1 (lower is better) Translates to: SKSLIPRPGLEIVQG*TTSKYRVACLLAKV Trigger: CACTTTAGCCAGTAAGCATGCCACCCTGTACTTGCTGGTGGTCCATCCCTGCACTATTTCCAAGCCAGGTCTTGGGATCAGTGACTTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR CCA 90 bp | ACTCTTAAGTATATTAGCTTCTGTGTGCCCAGCTGGCCTGCCCCTTaGCCTAGACCTGAAATGCAACTGGGGCAGCATCTTGTAGCATCT | + |
Preference number: 1 (lower is better) Translates to: TLKYISFCVPSWPAP*PRPEMQLGQHLVAS Trigger: AGATGCTACAAGATGCTGCCCCAGTTGCATTTCAGGTCTAGGCCAAGGGGCAGGCCAGCTGGGCACACAGAAGCTAATATACTTAAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR TCA 90 bp | GAGAGACAAGGAAGAGGACCATACCTTGGCTTTGCCAAGGACACGTaGGCTGCTGTACAGAAGCAAACTGCATGTTTCCAACTTCACCGA | + |
Preference number: 1 (lower is better) Translates to: ERQGRGPYLGFAKDT*AAVQKQTACFQLHR Trigger: TCGGTGAAGTTGGAAACATGCAGTTTGCTTCTGTACAGCAGCTCACGTGTCCTTGGCAAAGCCAAGGTATGGTCCTCTTCCTTGTCTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR TCA 90 bp | GCTTCCAAAACCCTCCATGTCAGAGAAGAAAGAAACCCAGGCTTGTaGAGAGAGCCTTCAGTACAACTCTACCACTCACCAGCCTGTGCT | + |
Preference number: 1 (lower is better) Translates to: ASKTLHVREERNPGL*REPSVQLYHSPACA Trigger: AGCACAGGCTGGTGAGTGGTAGAGTTGTACTGAAGGCTCTCTTCACAAGCCTGGGTTTCTTTCTTCTCTGACATGGAGGGTTTTGGAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR GCA 90 bp | GTCCTTCCCAACATCAGAACCACAGTACCTGAGGTTAGAAACACCTaGATCAAGGCCTACTTGGTCCCCATTGTGAGTCAGGGCCATATA | + |
Preference number: 1 (lower is better) Translates to: VLPNIRTTVPEVRNT*IKAYLVPIVSQGHI Trigger: TATATGGCCCTGACTCACAATGGGGACCAAGTAGGCCTTGATGCAGGTGTTTCTAACCTCAGGTACTGTGGTTCTGATGTTGGGAAGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR TCA 90 bp | CAGGGACAGGAGACCTGGAGACAAGGGGCCAACGGAATGATACCCTaGTTCTTCATCTCAAAGATGGAACCTGAGTTCTCAGAAAGAGAA | + |
Preference number: 1 (lower is better) Translates to: QGQETWRQGANGMIP*FFISKMEPEFSERE Trigger: TTCTCTTTCTGAGAACTCAGGTTCCATCTTTGAGATGAAGAATCAGGGTATCATTCCGTTGGCCCCTTGTCTCCAGGTCTCCTGTCCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR TCA 90 bp | TCTCAAAGATGGAACCTGAGTTCTCAGAAAGAGAACAACCCAGCCTaGACACAGCCCCTTAACCCCATCATTACACAAGGCCACAAAGTG | + |
Preference number: 1 (lower is better) Translates to: SQRWNLSSQKENNPA*TQPLNPIITQGHKV Trigger: CACTTTGTGGCCTTGTGTAATGATGGGGTTAAGGGGCTGTGTTCAGGCTGGGTTGTTCTCTTTCTGAGAACTCAGGTTCCATCTTTGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR TCA 90 bp | GGCCAACGGAATGATACCCTGATTCTTCATCTCAAAGATGGAACCTaGGTTCTCAGAAAGAGAACAACCCAGCCTGAACACAGCCCCTTA | + |
Preference number: 1 (lower is better) Translates to: GQRNDTLILHLKDGT*VLRKRTTQPEHSPL Trigger: TAAGGGGCTGTGTTCAGGCTGGGTTGTTCTCTTTCTGAGAACTCAGGTTCCATCTTTGAGATGAAGAATCAGGGTATCATTCCGTTGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR-3UTR CCA 90 bp | TCAGGACAGCAGCAGCTGCCTGGCCCCAGACCTACCACGGGCACATGGACCTGGAGTGCCCTGGAGAGCTaGGGCCGTGGCATGGAGGGC | + |
Preference number: 2 (lower is better) Translates to: SGQQQLPGPRPTTGTWTWSALES*GRGMEG Trigger: GCCCTCCATGCCACGGCCCCAGCTCTCCAGGGCACT...CCAGGTCCATGTGCCCGTGGTAGGTCTGGGGCCAGGCAGCTGCTGCTGTCCTGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR-3UTR GCA 90 bp | TCGTGGGTGGCAGACAGCTACTGGATCCTGTTTGCGCCAGGAGCGGCTGACCTCAGAGCACGGCCCCAGTaGCCTGGAGAGCTGGGGCCG | + |
Preference number: 2 (lower is better) Translates to: SWVADSYWILFAPGAADLRARPQ*PGELGP Trigger: CGGCCCCAGCTCTCCAGGGCACTGGGGCCGTGCTCT...GAGGTCAGCCGCTCCTGGCGCAAACAGGATCCAGTAGCTGTCTGCCACCCACGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR-3UTR CCA 90 bp | CCCCAAGCTCAGACCCCAGGCCCTTCCCAAAGCAGCAAAGGCCTCAGGGACCTTGCTGGGGCCGTGGCATaGAGGGCAGAGGACCCAAGC | + |
Preference number: 2 (lower is better) Translates to: PQAQTPGPSQSSKGLRDLAGAVA*RAEDPS Trigger: GCTTGGGTCCTCTGCCCTCCATGCCACGGCCCCAGC...AAGGTCCCTGAGGCCTTTGCTGCTTTGGGAAGGGCCTGGGGTCTGAGCTTGGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR-3UTR GCA 90 bp | CCTTCCCCCAATTCAGCAGTGAGGGTGAGGGGAGTAGACAGGCAAGAGGGAAGCCAGTCTGCCTCCCCCTaGTGGGACCTGGTGCCCTGG | + |
Preference number: 2 (lower is better) Translates to: PSPNSAVRVRGVDRQEGSQSASP*WDLVPW Trigger: CCAGGGCACCAGGTCCCAGCAGGGGGAGGCAGACTG...GCTTCCCTCTTGCCTGTCTACTCCCCTCACCCTCACTGCTGAATTGGGGGAAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR-3UTR CCA 90 bp | GAGGCAGAGGCACCTCCTGGTGCTCAGCAGAGCTGGTGCTCAGTGAAGCTGGTGTCCAAGTGGCCCAAGTaGAGAGCACGGCCCCAGTGC | + |
Preference number: 2 (lower is better) Translates to: EAEAPPGAQQSWCSVKLVSKWPK*RARPQC Trigger: GCACTGGGGCCGTGCTCTCCACTTGGGCCACTTGGA...CACCAGCTTCACTGAGCACCAGCTCTGCTGAGCACCAGGAGGTGCCTCTGCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR-3UTR GCA 90 bp | GCCCACAGGGGCCATAGGAGCCTTCCCAAAAGCAGGCTGGGAAGTGCCAGGACCGATGTGCCTGCCAGCTaGTGCTCCAGAGGTGAGGAA | + |
Preference number: 2 (lower is better) Translates to: AHRGHRSLPKSRLGSARTDVPAS*CSRGEE Trigger: TTCCTCACCTCTGGAGCAGCAGCTGGCAGGCACATC...GGTCCTGGCACTTCCCAGCCTGCTTTTGGGAAGGCTCCTATGGCCCCTGTGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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3UTR-3UTR GCA 90 bp | GCCCACAGGGGCCATAGGAGCCTTCCCAAAAGCAGGCTGGGAAGTGCCAGGACCAATGGCAGATGTGCCTaGCAGCTGCTGCTCCAGAGG | + |
Preference number: 2 (lower is better) Translates to: AHRGHRSLPKSRLGSARTNGRCA*QLLLQR Trigger: CCTCTGGAGCAGCAGCTGGCAGGCACATCTGCCATT...GGTCCTGGCACTTCCCAGCCTGCTTTTGGGAAGGCTCCTATGGCCCCTGTGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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3UTR-3UTR CCA 90 bp | GCCCACAGGGGCCATAGGAGCCTTCCCAAAAGCAGGCTGGGAAGTGCCAGGACCGAGGTGAGGAAGGCATaGCCCAGGCATGGTGTGAGA | + |
Preference number: 2 (lower is better) Translates to: AHRGHRSLPKSRLGSARTEVRKA*PRHGVR Trigger: TCTCACACCATGCCTGGGCCATGCCTTCCTCACCTC...GGTCCTGGCACTTCCCAGCCTGCTTTTGGGAAGGCTCCTATGGCCCCTGTGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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3UTR-3UTR CCA 90 bp | GATGGAGAAGCAGGGTCACTAGAAGGCCCTTCCTCCCACAGGCTCTCGCTGCCTGGCAGAGGCACCTCCTaGTGCTCAGCAGAGCTGGTG | + |
Preference number: 2 (lower is better) Translates to: DGEAGSLEGPSSHRLSLPGRGTS*CSAELV Trigger: CACCAGCTCTGCTGAGCACCAGGAGGTGCCTCTGCC...AGGCAGCGAGAGCCTGTGGGAGGAAGGGCCTTCTAGTGACCCTGCTTCTCCATC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR-3UTR TCA 90 bp | CAACTCTACCACTCACCAGCCTGTGCTGCCATGGCTCTAAAACAGGGCCACAGCCTGCTGCTCCAGAGGTaGGGAAGGCATGGCCCAGGC | + |
Preference number: 2 (lower is better) Translates to: QLYHSPACAAMALKQGHSLLLQR*GRHGPG Trigger: GCCTGGGCCATGCCTTCCTCACCTCTGGAGCAGCAG...GCTGTGGCCCTGTTTTAGAGCCATGGCAGCACAGGCTGGTGAGTGGTAGAGTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR-3UTR CCA 90 bp | GCCCACAGGGGCCATAGGAGCCTTCCCAAAAGCAGGCTGGGAAGTGCCAGGACCGCTTTCTCTGTGGCCTaGCAGAGAAGCAGGAAGGAG | + |
Preference number: 2 (lower is better) Translates to: AHRGHRSLPKSRLGSARTAFSVA*QRSRKE Trigger: CTCCTTCCTGCTTCTCTGCCAGGCCACAGAGAAAGC...GGTCCTGGCACTTCCCAGCCTGCTTTTGGGAAGGCTCCTATGGCCCCTGTGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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3UTR-3UTR CCA 90 bp | TCAGGACAGCAGCAGCTGCCTGGCCCCAGACCTACCACGGGCACATGGACCTGGCAAGCTCTGGGAAGCTaGCTTCAGGTCTCAGCTAGA | + |
Preference number: 2 (lower is better) Translates to: SGQQQLPGPRPTTGTWTWQALGS*LQVSAR Trigger: TCTAGCTGAGACCTGAAGCCAGCTTCCCAGAGCTTG...CCAGGTCCATGTGCCCGTGGTAGGTCTGGGGCCAGGCAGCTGCTGCTGTCCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR-3UTR GCA 90 bp | TGGCAGACAGCTACTGGATCCTGTTTGCGCCAGGAGCGGCTGACCTCTACTACACAGGACAGCAGCAGCTaGCTGGCCCCAGACCTACCA | + |
Preference number: 2 (lower is better) Translates to: WQTATGSCLRQERLTSTTQDSSS*LAPDLP Trigger: TGGTAGGTCTGGGGCCAGGCAGCTGCTGCTGTCCTG...TGTAGTAGAGGTCAGCCGCTCCTGGCGCAAACAGGATCCAGTAGCTGTCTGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR-3UTR GCA 90 bp | CAACTCTACCACTCACCAGCCTGTGCTGCCATGGCTCTAAAACAGGGCCACAGCCCTGCTGGGACCTGGTaGCCTGGACACATGCCAGCA | + |
Preference number: 2 (lower is better) Translates to: QLYHSPACAAMALKQGHSPAGTW*PGHMPA Trigger: TGCTGGCATGTGTCCAGGGCACCAGGTCCCAGCAGG...GCTGTGGCCCTGTTTTAGAGCCATGGCAGCACAGGCTGGTGAGTGGTAGAGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR-3UTR CCA 90 bp | CCCCAAGCTCAGACCCCAGGCCCTTCCCAAAGCAGCAAAGGCCTCAGGGACCTTGCTTTCTCTGTGGCCTaGCAGAGAAGCAGGAAGGAG | + |
Preference number: 2 (lower is better) Translates to: PQAQTPGPSQSSKGLRDLAFSVA*QRSRKE Trigger: CTCCTTCCTGCTTCTCTGCCAGGCCACAGAGAAAGC...AAGGTCCCTGAGGCCTTTGCTGCTTTGGGAAGGGCCTGGGGTCTGAGCTTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR-3UTR CCA 90 bp | TTCCTCCCACAGGCTCTCGCTGCCTCCTGTTCCTATGCGCGTTCAGTTAACAGTACAGCAGCAGCTGCCTaGCCCCAGACCTACCACGGG | + |
Preference number: 2 (lower is better) Translates to: FLPQALAASCSYARSVNSTAAAA*PQTYHG Trigger: CCCGTGGTAGGTCTGGGGCCAGGCAGCTGCTGCTGT...ACTGTTAACTGAACGCGCATAGGAACAGGAGGCAGCGAGAGCCTGTGGGAGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
||
3UTR-3UTR TCA 90 bp | CAGAGCTGGTGCTCAGTGAAGCTGGTGTGCAGAGCTAACATTCTCACCAAGCTCCTGCTGCTCCAGAGGTaGGGAAGGCATGGCCCAGGC | + |
Preference number: 2 (lower is better) Translates to: QSWCSVKLVCRANILTKLLLLQR*GRHGPG Trigger: GCCTGGGCCATGCCTTCCTCACCTCTGGAGCAGCAG...GAGCTTGGTGAGAATGTTAGCTCTGCACACCAGCTTCACTGAGCACCAGCTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
||
3UTR-3UTR TCA 90 bp | ATAGGAGCCTTCCCAAAAGCAGGCTGGGAAGTGCCAGGACCATGTCGAGAAAGTCTGCTGCTCCAGAGGTaGGGAAGGCATGGCCCAGGC | + |
Preference number: 2 (lower is better) Translates to: IGAFPKAGWEVPGPCRESLLLQR*GRHGPG Trigger: GCCTGGGCCATGCCTTCCTCACCTCTGGAGCAGCAG...ACTTTCTCGACATGGTCCTGGCACTTCCCAGCCTGCTTTTGGGAAGGCTCCTAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
||
3UTR-3UTR TCA 90 bp | GATGGAGAAGCAGGGTCACTAGAAGGCCCTTCCTCCCACAGGCTCTCGCTGCCTCCAAGTTACTGCTGCTaGCACCAAGGCACCGTGACA | + |
Preference number: 2 (lower is better) Translates to: DGEAGSLEGPSSHRLSLPPSYCC*HQGTVT Trigger: TGTCACGGTGCCTTGGTGTCAGCAGCAGTAACTTGG...AGGCAGCGAGAGCCTGTGGGAGGAAGGGCCTTCTAGTGACCCTGCTTCTCCATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
||
3UTR-3UTR GCA 90 bp | ACAGGGGCCATAGGAGCCTTCCCAAAAGCAGGCTGGGAAGTGCCAGGACCATGTAATGGCAGATGTGCCTaGCAGCTGCTGCTCCAGAGG | + |
Preference number: 2 (lower is better) Translates to: TGAIGAFPKAGWEVPGPCNGRCA*QLLLQR Trigger: CCTCTGGAGCAGCAGCTGGCAGGCACATCTGCCATT...ACATGGTCCTGGCACTTCCCAGCCTGCTTTTGGGAAGGCTCCTATGGCCCCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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3UTR-3UTR GCA 90 bp | GGGGCCTGTGACCACAGCACTGCAGGAAGCAAGTCACTGATCCCAAGACCTGGCTCCAGCCCCTTATCCTaGGACATGCATGGGTGTGTG | + |
Preference number: 2 (lower is better) Translates to: GACDHSTAGSKSLIPRPGSSPLS*DMHGCV Trigger: CACACACCCATGCATGTCGCAGGATAAGGGGCTGGA...GCCAGGTCTTGGGATCAGTGACTTGCTTCCTGCAGTGCTGTGGTCACAGGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
||
3UTR-3UTR CCA 90 bp | CTCAGAAAGAGAACAACCCAGCCTGAACACAGCCCCTTAACCCCATCATTACACACGGCCCCAGTGCCCTaGAGAGCTGGGGCCGTGGCA | + |
Preference number: 2 (lower is better) Translates to: LRKRTTQPEHSPLTPSLHTAPVP*RAGAVA Trigger: TGCCACGGCCCCAGCTCTCCAGGGCACTGGGGCCGT...GTGTAATGATGGGGTTAAGGGGCTGTGTTCAGGCTGGGTTGTTCTCTTTCTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR-3UTR CCA 90 bp | CAACTCTACCACTCACCAGCCTGTGCTGCCATGGCTCTAAAACAGGGCCACAGCTTCTGTGTGCCCAGCTaGCCTGCCCCTTGGCCTAGA | + |
Preference number: 2 (lower is better) Translates to: QLYHSPACAAMALKQGHSFCVPS*PAPWPR Trigger: TCTAGGCCAAGGGGCAGGCCAGCTGGGCACACAGAA...GCTGTGGCCCTGTTTTAGAGCCATGGCAGCACAGGCTGGTGAGTGGTAGAGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
||
3UTR-3UTR TCA 90 bp | GTGGCAGACAGCTACTGGATCCTGTTTGCGCCAGGAGCGGCTGACCTCTACTACAGGCATGGTGTGAGATaGGCAAGCAGCCTTCCAAGG | + |
Preference number: 2 (lower is better) Translates to: VADSYWILFAPGAADLYYRHGVR*ASSLPR Trigger: CCTTGGAAGGCTGCTTGCTCATCTCACACCATGCCT...GTAGTAGAGGTCAGCCGCTCCTGGCGCAAACAGGATCCAGTAGCTGTCTGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR-3UTR CCA 90 bp | GTGCCCACAGGGGCCATAGGAGCCTTCCCAAAAGCAGGCTGGGAAGTGCCAGGACAATTCCAGGACAAATaGCAGATGTGCCTGCCAGCT | + |
Preference number: 2 (lower is better) Translates to: VPTGAIGAFPKAGWEVPGQFQDK*QMCLPA Trigger: AGCTGGCAGGCACATCTGCCATTTGTCCTGGAATTG...TCCTGGCACTTCCCAGCCTGCTTTTGGGAAGGCTCCTATGGCCCCTGTGGGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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3UTR-3UTR CCA 90 bp | CCCCAAGCTCAGACCCCAGGCCCTTCCCAAAGCAGCAAAGGCCTCAGGGACCTTATCCTGCGACATGCATaGGTGTGTGTTTCTGTGACC | + |
Preference number: 2 (lower is better) Translates to: PQAQTPGPSQSSKGLRDLILRHA*VCVSVT Trigger: GGTCACAGAAACACACACCCATGCATGTCGCAGGAT...AAGGTCCCTGAGGCCTTTGCTGCTTTGGGAAGGGCCTGGGGTCTGAGCTTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR-3UTR GCA 90 bp | TTCCTCCCACAGGCTCTCGCTGCCTCCTGTTCCTATGCGCGTTCAGTTAACAGTGATGTGCCTGCCAGCTaGTGCTCCAGAGGTGAGGAA | + |
Preference number: 2 (lower is better) Translates to: FLPQALAASCSYARSVNSDVPAS*CSRGEE Trigger: TTCCTCACCTCTGGAGCAGCAGCTGGCAGGCACATC...ACTGTTAACTGAACGCGCATAGGAACAGGAGGCAGCGAGAGCCTGTGGGAGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR-3UTR CCA 90 bp | CTGGGCTCTGACCAGCAGCTGGGTGGAAGGAGCTTCACATTACAGGGTCTAGAAGGCATGGCCCAGGCATaGTGTGAGATGAGCAAGCAG | + |
Preference number: 2 (lower is better) Translates to: LGSDQQLGGRSFTLQGLEGMAQA*CEMSKQ Trigger: CTGCTTGCTCATCTCACACCATGCCTGGGCCATGCC...TTCTAGACCCTGTAATGTGAAGCTCCTTCCACCCAGCTGCTGGTCAGAGCCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR-3UTR CCA 90 bp | CTGGGCTCTGACCAGCAGCTGGGTGGAAGGAGCTTCACATTACAGGGTCTAGAAGAGGTGAGGAAGGCATaGCCCAGGCATGGTGTGAGA | + |
Preference number: 2 (lower is better) Translates to: LGSDQQLGGRSFTLQGLEEVRKA*PRHGVR Trigger: TCTCACACCATGCCTGGGCCATGCCTTCCTCACCTC...TTCTAGACCCTGTAATGTGAAGCTCCTTCCACCCAGCTGCTGGTCAGAGCCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR-3UTR TCA 90 bp | GGGGCCTGTGACCACAGCACTGCAGGAAGCAAGTCACTGATCCCAAGACCTGGCAAGGGGCCAACGGAATaGTACCCTGATTCTTCATCT | + |
Preference number: 2 (lower is better) Translates to: GACDHSTAGSKSLIPRPGKGPTE*YPDSSS Trigger: AGATGAAGAATCAGGGTATCATTCCGTTGGCCCCTT...GCCAGGTCTTGGGATCAGTGACTTGCTTCCTGCAGTGCTGTGGTCACAGGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR-3UTR CCA 90 bp | TTCCTCCCACAGGCTCTCGCTGCCTCCTGTTCCTATGCGCGTTCAGTTAACAGTCCAAGGCTTTCTCTGTaGCCTGGCAGAGAAGCAGGA | + |
Preference number: 2 (lower is better) Translates to: FLPQALAASCSYARSVNSPRLSL*PGREAG Trigger: TCCTGCTTCTCTGCCAGGCCACAGAGAAAGCCTTGG...ACTGTTAACTGAACGCGCATAGGAACAGGAGGCAGCGAGAGCCTGTGGGAGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR-3UTR CCA 90 bp | CTGACACCAAGGCACCGTGACAATTCCAGGACAAATGGCAGATGTGCCTGCCAGCCAAGGCTTTCTCTGTaGCCTGGCAGAGAAGCAGGA | + |
Preference number: 2 (lower is better) Translates to: LTPRHRDNSRTNGRCACQPRLSL*PGREAG Trigger: TCCTGCTTCTCTGCCAGGCCACAGAGAAAGCCTTGG...CTGGCAGGCACATCTGCCATTTGTCCTGGAATTGTCACGGTGCCTTGGTGTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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3UTR-3UTR CCA 90 bp | CATGTTTCCAACTTCACCGACTTCTGCAGCACAGTGAGGTGGCAGGGCATTAGATCCCCGGAATCCAAGTaGCCCAAGTGGAGAGCACGG | + |
Preference number: 2 (lower is better) Translates to: HVSNFTDFCSTVRWQGIRSPESK*PKWRAR Trigger: CCGTGCTCTCCACTTGGGCCACTTGGATTCCGGGGA...TCTAATGCCCTGCCACCTCACTGTGCTGCAGAAGTCGGTGAAGTTGGAAACATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR-3UTR CCA 90 bp | GATGGAGAAGCAGGGTCACTAGAAGGCCCTTCCTCCCACAGGCTCTCGCTGCCTGACCCTGTCTCCACATaGTATCTTAGAAACCTCGTG | + |
Preference number: 2 (lower is better) Translates to: DGEAGSLEGPSSHRLSLPDPVST*YLRNLV Trigger: CACGAGGTTTCTAAGATACCATGTGGAGACAGGGTC...AGGCAGCGAGAGCCTGTGGGAGGAAGGGCCTTCTAGTGACCCTGCTTCTCCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR-3UTR CCA 90 bp | CAACTCTACCACTCACCAGCCTGTGCTGCCATGGCTCTAAAACAGGGCCACAGCAACTCTGAAACTGGGTaGACAGGAGGGAGGCAGGAT | + |
Preference number: 2 (lower is better) Translates to: QLYHSPACAAMALKQGHSNSETG*TGGRQD Trigger: ATCCTGCCTCCCTCCTGTCCACCCAGTTTCAGAGTT...GCTGTGGCCCTGTTTTAGAGCCATGGCAGCACAGGCTGGTGAGTGGTAGAGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR CAA 90 bp | CTCAGACCCCAGGCCCTTCCCAAAGCAGCAAAGGCCTCAGGGACCTaGAACAATGGCTCCCGGCCAGTCTCCTTAAATCACAACAGAAAA | + |
Preference number: 2 (lower is better) Translates to: LRPQALPKAAKASGT*NNGSRPVSLNHNRK Trigger: TTTTCTGTTGTGATTTAAGGAGACTGGCCGGGAGCCATTGTTCAAGGTCCCTGAGGCCTTTGCTGCTTTGGGAAGGGCCTGGGGTCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR-3UTR TCA 90 bp | CAGAGCTGGTGCTCAGTGAAGCTGGTGTGCAGAGCTAACATTCTCACCAAGCTCACTTCTGCAGCACAGTaGGGTGGCAGGGCATTAGAG | + |
Preference number: 2 (lower is better) Translates to: QSWCSVKLVCRANILTKLTSAAQ*GGRALE Trigger: CTCTAATGCCCTGCCACCTCACTGTGCTGCAGAAGT...GAGCTTGGTGAGAATGTTAGCTCTGCACACCAGCTTCACTGAGCACCAGCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR-3UTR TCA 90 bp | TCTGTGTGCCCAGCTGGCCTGCCCCTTGGCCTAGACCTGAAATGCAACTGGGGCCTCAAAGATGGAACCTaGGTTCTCAGAAAGAGAACA | + |
Preference number: 2 (lower is better) Translates to: SVCPAGLPLGLDLKCNWGLKDGT*VLRKRT Trigger: TGTTCTCTTTCTGAGAACTCAGGTTCCATCTTTGAG...GCCCCAGTTGCATTTCAGGTCTAGGCCAAGGGGCAGGCCAGCTGGGCACACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR-3UTR CCA 90 bp | CAGAGCTGGTGCTCAGTGAAGCTGGTGTGCAGAGCTAACATTCTCACCAAGCTCCCAAGGCTTTCTCTGTaGCCTGGCAGAGAAGCAGGA | + |
Preference number: 2 (lower is better) Translates to: QSWCSVKLVCRANILTKLPRLSL*PGREAG Trigger: TCCTGCTTCTCTGCCAGGCCACAGAGAAAGCCTTGG...GAGCTTGGTGAGAATGTTAGCTCTGCACACCAGCTTCACTGAGCACCAGCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR-3UTR TCA 90 bp | CTGTCCTTCCCAACATCAGAACCACAGTACCTGAGGTTAGAAACACCTGCATCAGACAAAGCTGGGCTCTaGCCAGCAGCTGGGTGGAAG | + |
Preference number: 2 (lower is better) Translates to: LSFPTSEPQYLRLETPASDKAGL*PAAGWK Trigger: CTTCCACCCAGCTGCTGGTCAGAGCCCAGCTTTGTC...TGATGCAGGTGTTTCTAACCTCAGGTACTGTGGTTCTGATGTTGGGAAGGACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR-3UTR GCA 90 bp | CAACTCTACCACTCACCAGCCTGTGCTGCCATGGCTCTAAAACAGGGCCACAGCCCTTATCCTGCGACATaGATGGGTGTGTGTTTCTGT | + |
Preference number: 2 (lower is better) Translates to: QLYHSPACAAMALKQGHSPYPAT*MGVCFC Trigger: ACAGAAACACACACCCATGCATGTCGCAGGATAAGG...GCTGTGGCCCTGTTTTAGAGCCATGGCAGCACAGGCTGGTGAGTGGTAGAGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR-3UTR CCA 90 bp | GCTAAAGTGCCAGGTACCCAAGGGCACCCATGTCCCTCCCTACTCTTAAGTATAGCTCTGACCAGCAGCTaGGTGGAAGGAGCTTCACAT | + |
Preference number: 2 (lower is better) Translates to: AKVPGTQGHPCPSLLLSIALTSS*VEGASH Trigger: ATGTGAAGCTCCTTCCACCCAGCTGCTGGTCAGAGC...TATACTTAAGAGTAGGGAGGGACATGGGTGCCCTTGGGTACCTGGCACTTTAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR-3UTR TCA 90 bp | TCAGAGAAGAAAGAAACCCAGGCTTGTGAAGAGAGCCTTCAGTACAACTCTACCCCTGGCCAATGGCTCTaGAGGGCTGGACAGTCTCTC | + |
Preference number: 2 (lower is better) Translates to: SEKKETQACEESLQYNSTPGQWL*RAGQSL Trigger: GAGAGACTGTCCAGCCCTTCAGAGCCATTGGCCAGG...GGTAGAGTTGTACTGAAGGCTCTCTTCACAAGCCTGGGTTTCTTTCTTCTCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR-3UTR CCA 90 bp | TCAGAGAAGAAAGAAACCCAGGCTTGTGAAGAGAGCCTTCAGTACAACTCTACCTCCCCGGAATCCAAGTaGCCCAAGTGGAGAGCACGG | + |
Preference number: 2 (lower is better) Translates to: SEKKETQACEESLQYNSTSPESK*PKWRAR Trigger: CCGTGCTCTCCACTTGGGCCACTTGGATTCCGGGGA...GGTAGAGTTGTACTGAAGGCTCTCTTCACAAGCCTGGGTTTCTTTCTTCTCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR-3UTR CCA 90 bp | TCGTGGGTGGCAGACAGCTACTGGATCCTGTTTGCGCCAGGAGCGGCTGACCTCTCTTCATCTCAAAGATaGAACCTGAGTTCTCAGAAA | + |
Preference number: 2 (lower is better) Translates to: SWVADSYWILFAPGAADLSSSQR*NLSSQK Trigger: TTTCTGAGAACTCAGGTTCCATCTTTGAGATGAAGA...GAGGTCAGCCGCTCCTGGCGCAAACAGGATCCAGTAGCTGTCTGCCACCCACGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR CAA 90 bp | TCCAGGGCTAAGGTGAGAGACAAGGAAGAGGACCATACCTTGGCTTaGCCAAGGACACGTGAGCTGCTGTACAGAAGCAAACTGCATGTT | + |
Preference number: 2 (lower is better) Translates to: SRAKVRDKEEDHTLA*PRTRELLYRSKLHV Trigger: AACATGCAGTTTGCTTCTGTACAGCAGCTCACGTGTCCTTGGCAAAGCCAAGGTATGGTCCTCTTCCTTGTCTCTCACCTTAGCCCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR-3UTR TCA 90 bp | CATCAGTGTAAACATTTTCATTGTGCCCACAGGGGCCATAGGAGCCTTCCCAAAAGGCATGGTGTGAGATaGGCAAGCAGCCTTCCAAGG | + |
Preference number: 2 (lower is better) Translates to: HQCKHFHCAHRGHRSLPKRHGVR*ASSLPR Trigger: CCTTGGAAGGCTGCTTGCTCATCTCACACCATGCCT...TTTGGGAAGGCTCCTATGGCCCCTGTGGGCACAATGAAAATGTTTACACTGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR-3UTR TCA 90 bp | TCAGAGAAGAAAGAAACCCAGGCTTGTGAAGAGAGCCTTCAGTACAACTCTACCAGGAGGGGCCAAGAATaGTGGACCAGGGACAGGAGA | + |
Preference number: 2 (lower is better) Translates to: SEKKETQACEESLQYNSTRRGQE*WTRDRR Trigger: TCTCCTGTCCCTGGTCCATCATTCTTGGCCCCTCCT...GGTAGAGTTGTACTGAAGGCTCTCTTCACAAGCCTGGGTTTCTTTCTTCTCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR-3UTR GCA 90 bp | CCTTCCCCCAATTCAGCAGTGAGGGTGAGGGGAGTAGACAGGCAAGAGGGAAGCTTTAAGAAGACTCTCTaGTCAGTCTCTTGGCATTCT | + |
Preference number: 2 (lower is better) Translates to: PSPNSAVRVRGVDRQEGSFKKTL*SVSWHS Trigger: AGAATGCCAAGAGACTGAGCAGAGAGTCTTCTTAAA...GCTTCCCTCTTGCCTGTCTACTCCCCTCACCCTCACTGCTGAATTGGGGGAAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR-3UTR GCA 90 bp | TCAGAGAAGAAAGAAACCCAGGCTTGTGAAGAGAGCCTTCAGTACAACTCTACCAAGCAGGCTGGGAAGTaGCAGGACCATGTCGAGAAA | + |
Preference number: 2 (lower is better) Translates to: SEKKETQACEESLQYNSTKQAGK*QDHVEK Trigger: TTTCTCGACATGGTCCTGGCACTTCCCAGCCTGCTT...GGTAGAGTTGTACTGAAGGCTCTCTTCACAAGCCTGGGTTTCTTTCTTCTCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR-3UTR GCA 90 bp | CTCAGAAAGAGAACAACCCAGCCTGAACACAGCCCCTTAACCCCATCATTACACGAGGTTAGAAACACCTaGATCAAGGCCTACTTGGTC | + |
Preference number: 2 (lower is better) Translates to: LRKRTTQPEHSPLTPSLHEVRNT*IKAYLV Trigger: GACCAAGTAGGCCTTGATGCAGGTGTTTCTAACCTC...GTGTAATGATGGGGTTAAGGGGCTGTGTTCAGGCTGGGTTGTTCTCTTTCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR-3UTR CCA 90 bp | TCAGAGAAGAAAGAAACCCAGGCTTGTGAAGAGAGCCTTCAGTACAACTCTACCATCCTGCGACATGCATaGGTGTGTGTTTCTGTGACC | + |
Preference number: 2 (lower is better) Translates to: SEKKETQACEESLQYNSTILRHA*VCVSVT Trigger: GGTCACAGAAACACACACCCATGCATGTCGCAGGAT...GGTAGAGTTGTACTGAAGGCTCTCTTCACAAGCCTGGGTTTCTTTCTTCTCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR CCA 72 bp | CAAGTGGCCCAAGTGGAGAGCACGGCCCCAGTGCCCTaGAGAGCTGGGGCCGTGGCATGGAGGGCAGAGGAC | + |
Preference number: 3 (lower is better) Translates to: QVAQVESTAPVP*RAGAVAWRAED Trigger: GTCCTCTGCCCTCCATGCCACGGCCCCAGCTCTCCAGGGCACTGGGGCCGTGCTCTCCACTTGGGCCACTTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR GCA 72 bp | GAATCCAAGTGGCCCAAGTGGAGAGCACGGCCCCAGTaGCCTGGAGAGCTGGGGCCGTGGCATGGAGGGCAG | + |
Preference number: 3 (lower is better) Translates to: ESKWPKWRARPQ*PGELGPWHGGQ Trigger: CTGCCCTCCATGCCACGGCCCCAGCTCTCCAGGGCACTGGGGCCGTGCTCTCCACTTGGGCCACTTGGATTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR CCA 72 bp | AGAGCACGGCCCCAGTGCCCTGGAGAGCTGGGGCCGTaGCATGGAGGGCAGAGGACCCAAGCTCCAGAAACT | + |
Preference number: 3 (lower is better) Translates to: RARPQCPGELGP*HGGQRTQAPET Trigger: AGTTTCTGGAGCTTGGGTCCTCTGCCCTCCATGCCACGGCCCCAGCTCTCCAGGGCACTGGGGCCGTGCTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR CCA 72 bp | TGTGACCCAAAGTCCCCGGAATCCAAGTGGCCCAAGTaGAGAGCACGGCCCCAGTGCCCTGGAGAGCTGGGG | + |
Preference number: 3 (lower is better) Translates to: CDPKSPESKWPK*RARPQCPGELG Trigger: CCCCAGCTCTCCAGGGCACTGGGGCCGTGCTCTCCACTTGGGCCACTTGGATTCCGGGGACTTTGGGTCACA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR CCA 72 bp | GCCATGGCTCTAAAACAGGGCCACAGCCACCAAGCCTaGGTGAGGGAGCCATGGCTCCTCCCCTCCCAACTC | + |
Preference number: 3 (lower is better) Translates to: AMALKQGHSHQA*VREPWLLPSQL Trigger: GAGTTGGGAGGGGAGGAGCCATGGCTCCCTCACCCAGGCTTGGTGGCTGTGGCCCTGTTTTAGAGCCATGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR TCA 72 bp | GTACAGTGGCGGATGAAGGCCCACATGGGTAGTCGCTaGAGGGCCACGGATGGGCAGAGGGCACCACTCGTA | + |
Preference number: 3 (lower is better) Translates to: VQWRMKAHMGSR*RATDGQRAPLV Trigger: TACGAGTGGTGCCCTCTGCCCATCCGTGGCCCTTCAGCGACTACCCATGTGGGCCTTCATCCGCCACTGTAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR GCA 72 bp | CTGCCTCCTGTTCCTATGCGCGTTCAGTTAACAGTCTaGCTCCCCCTGCTGGGACCTGGTGCCCTGGACACA | + |
Preference number: 3 (lower is better) Translates to: LPPVPMRVQLTV*LPLLGPGALDT Trigger: TGTGTCCAGGGCACCAGGTCCCAGCAGGGGGAGGCAGACTGTTAACTGAACGCGCATAGGAACAGGAGGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR CCA 72 bp | GTGTGTTTCTGTGACCCAAAGTCCCCGGAATCCAAGTaGCCCAAGTGGAGAGCACGGCCCCAGTGCCCTGGA | + |
Preference number: 3 (lower is better) Translates to: VCFCDPKSPESK*PKWRARPQCPG Trigger: TCCAGGGCACTGGGGCCGTGCTCTCCACTTGGGCCACTTGGATTCCGGGGACTTTGGGTCACAGAAACACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
||
3UTR TCA 72 bp | GCCAAGCTGCTAGACATGGCTGACTGGAGGGGCCTGTaGCCACAGCACTGCAGGAAGCAAGTCACTGATCCC | + |
Preference number: 3 (lower is better) Translates to: AKLLDMADWRGL*PQHCRKQVTDP Trigger: GGGATCAGTGACTTGCTTCCTGCAGTGCTGTGGTCACAGGCCCCTCCAGTCAGCCATGTCTAGCAGCTTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
||
3UTR CCA 72 bp | CACAGACGCAGACCAGGGGCTGTTCTCTCTTGGCCTTaGCACCAAGTTACTGCTGCTGACACCAAGGCACCG | + |
Preference number: 3 (lower is better) Translates to: HRRRPGAVLSWP*HQVTAADTKAP Trigger: CGGTGCCTTGGTGTCAGCAGCAGTAACTTGGTGCCAAGGCCAAGAGAGAACAGCCCCTGGTCTGCGTCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
||
3UTR-3UTR CAA 90 bp | CCCCAAGCTCAGACCCCAGGCCCTTCCCAAAGCAGCAAAGGCCTCAGGGACCTTATCCCAAGACCTGGCTaGGAAATAGTGCAGGGATGG | + |
Preference number: 3 (lower is better) Translates to: PQAQTPGPSQSSKGLRDLIPRPG*EIVQGW Trigger: CCATCCCTGCACTATTTCCAAGCCAGGTCTTGGGAT...AAGGTCCCTGAGGCCTTTGCTGCTTTGGGAAGGGCCTGGGGTCTGAGCTTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
||
3UTR GCA 72 bp | AGAGAAGCAGGAAGGAGGCTGGTAACTGCCGTCCTCTaGGGGCCATCTTGTGTTCTGAGGAGGCTGAGTGAG | + |
Preference number: 3 (lower is better) Translates to: REAGRRLVTAVL*GPSCVLRRLSE Trigger: CTCACTCAGCCTCCTCAGAACACAAGATGGCCCGCAGAGGACGGCAGTTACCAGCCTCCTTCCTGCTTCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
||
3UTR GCA 72 bp | TTATGTCCTCCAGCAAGAGGCAGAGGCACCTCCTGGTaGTCAGCAGAGCTGGTGCTCAGTGAAGCTGGTGTG | + |
Preference number: 3 (lower is better) Translates to: LCPPARGRGTSW*SAELVLSEAGV Trigger: CACACCAGCTTCACTGAGCACCAGCTCTGCTGAGCACCAGGAGGTGCCTCTGCCTCTTGCTGGAGGACATAA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
||
3UTR CCA 72 bp | TGCTGCTCCAGAGGTGAGGAAGGCATGGCCCAGGCATaGTGTGAGATGAGCAAGCAGCCTTCCAAGGCTTTC | + |
Preference number: 3 (lower is better) Translates to: CCSRGEEGMAQA*CEMSKQPSKAF Trigger: GAAAGCCTTGGAAGGCTGCTTGCTCATCTCACACCATGCCTGGGCCATGCCTTCCTCACCTCTGGAGCAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
||
3UTR CCA 72 bp | AGCTTATGTCCTCCAGCAAGAGGCAGAGGCACCTCCTaGTGCTCAGCAGAGCTGGTGCTCAGTGAAGCTGGT | + |
Preference number: 3 (lower is better) Translates to: SLCPPARGRGTS*CSAELVLSEAG Trigger: ACCAGCTTCACTGAGCACCAGCTCTGCTGAGCACCAGGAGGTGCCTCTGCCTCTTGCTGGAGGACATAAGCT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
||
3UTR-3UTR CAA 90 bp | GTGGCAGACAGCTACTGGATCCTGTTTGCGCCAGGAGCGGCTGACCTCTACTACGAAGAGGACCATACCTaGGCTTTGCCAAGGACACGT | + |
Preference number: 3 (lower is better) Translates to: VADSYWILFAPGAADLYYEEDHT*ALPRTR Trigger: ACGTGTCCTTGGCAAAGCCAAGGTATGGTCCTCTTC...GTAGTAGAGGTCAGCCGCTCCTGGCGCAAACAGGATCCAGTAGCTGTCTGCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
||
3UTR GCA 72 bp | GCCTTCAGTACAACTCTACCACTCACCAGCCTGTGCTaGCATGGCTCTAAAACAGGGCCACAGCCACCAAGC | + |
Preference number: 3 (lower is better) Translates to: AFSTTLPLTSLC*HGSKTGPQPPS Trigger: GCTTGGTGGCTGTGGCCCTGTTTTAGAGCCATGGCAGCACAGGCTGGTGAGTGGTAGAGTTGTACTGAAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
||
3UTR CCA 72 bp | ATGAGCAAGCAGCCTTCCAAGGCTTTCTCTGTGGCCTaGCAGAGAAGCAGGAAGGAGGCTGGTAACTGCCGT | + |
Preference number: 3 (lower is better) Translates to: MSKQPSKAFSVA*QRSRKEAGNCR Trigger: ACGGCAGTTACCAGCCTCCTTCCTGCTTCTCTGCCAGGCCACAGAGAAAGCCTTGGAAGGCTGCTTGCTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
||
3UTR CCA 72 bp | CAGGACCATGTCGAGAAAGTCCTTCAGCCTCTCTCTTaGGGACACAGACGCAGACCAGGGGCTGTTCTCTCT | + |
Preference number: 3 (lower is better) Translates to: QDHVEKVLQPLS*GHRRRPGAVLS Trigger: AGAGAGAACAGCCCCTGGTCTGCGTCTGTGTCCCCAAGAGAGAGGCTGAAGGACTTTCTCGACATGGTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
||
3UTR CCA 72 bp | CAAGAGGCAGAGGCACCTCCTGGTGCTCAGCAGAGCTaGTGCTCAGTGAAGCTGGTGTGCAGAGCTAACATT | + |
Preference number: 3 (lower is better) Translates to: QEAEAPPGAQQS*CSVKLVCRANI Trigger: AATGTTAGCTCTGCACACCAGCTTCACTGAGCACCAGCTCTGCTGAGCACCAGGAGGTGCCTCTGCCTCTTG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
||
3UTR CCA 72 bp | GATGGACCACCAGCAAGTACAGGGTGGCATGCTTACTaGCTAAAGTGCCAGGTACCCAAGGGCACCCATGTC | + |
Preference number: 3 (lower is better) Translates to: DGPPASTGWHAY*LKCQVPKGTHV Trigger: GACATGGGTGCCCTTGGGTACCTGGCACTTTAGCCAGTAAGCATGCCACCCTGTACTTGCTGGTGGTCCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
||
3UTR TCA 72 bp | CCCTTATCCTGCGACATGCATGGGTGTGTGTTTCTGTaGCCCAAAGTCCCCGGAATCCAAGTGGCCCAAGTG | + |
Preference number: 3 (lower is better) Translates to: PLSCDMHGCVFL*PKVPGIQVAQV Trigger: CACTTGGGCCACTTGGATTCCGGGGACTTTGGGTCACAGAAACACACACCCATGCATGTCGCAGGATAAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
||
3UTR GCA 72 bp | AGAGCCTTCAGTACAACTCTACCACTCACCAGCCTGTaGTGCCATGGCTCTAAAACAGGGCCACAGCCACCA | + |
Preference number: 3 (lower is better) Translates to: RAFSTTLPLTSL*CHGSKTGPQPP Trigger: TGGTGGCTGTGGCCCTGTTTTAGAGCCATGGCAGCACAGGCTGGTGAGTGGTAGAGTTGTACTGAAGGCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
||
3UTR TCA 72 bp | AAGGCATCTAGCACTTTGCTCCCTGGCCAATGGCTCTaGAGGGCTGGACAGTCTCTCAGGGTGCTAAGCTTA | + |
Preference number: 3 (lower is better) Translates to: KASSTLLPGQWL*RAGQSLRVLSL Trigger: TAAGCTTAGCACCCTGAGAGACTGTCCAGCCCTTCAGAGCCATTGGCCAGGGAGCAAAGTGCTAGATGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
||
3UTR CCA 72 bp | AGGACCCAAGCTCCAGAAACTGGTAAAAGACAAAGCTaGGCTCTGACCAGCAGCTGGGTGGAAGGAGCTTCA | + |
Preference number: 3 (lower is better) Translates to: RTQAPETGKRQS*ALTSSWVEGAS Trigger: TGAAGCTCCTTCCACCCAGCTGCTGGTCAGAGCCCAGCTTTGTCTTTTACCAGTTTCTGGAGCTTGGGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
||
3UTR CCA 72 bp | AAGCTGGTGTGCAGAGCTAACATTCTCACCAAGCTCTaGGAAGCTGGCTTCAGGTCTCAGCTAGAAGGAGGG | + |
Preference number: 3 (lower is better) Translates to: KLVCRANILTKL*EAGFRSQLEGG Trigger: CCCTCCTTCTAGCTGAGACCTGAAGCCAGCTTCCCAGAGCTTGGTGAGAATGTTAGCTCTGCACACCAGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
||
3UTR CCA 72 bp | TATATTAGCTTCTGTGTGCCCAGCTGGCCTGCCCCTTaGCCTAGACCTGAAATGCAACTGGGGCAGCATCTT | + |
Preference number: 3 (lower is better) Translates to: YISFCVPSWPAP*PRPEMQLGQHL Trigger: AAGATGCTGCCCCAGTTGCATTTCAGGTCTAGGCCAAGGGGCAGGCCAGCTGGGCACACAGAAGCTAATATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
||
3UTR CCA 72 bp | CTGATCCCAAGACCTGGCTTGGAAATAGTGCAGGGATaGACCACCAGCAAGTACAGGGTGGCATGCTTACTG | + |
Preference number: 3 (lower is better) Translates to: LIPRPGLEIVQG*TTSKYRVACLL Trigger: CAGTAAGCATGCCACCCTGTACTTGCTGGTGGTCCATCCCTGCACTATTTCCAAGCCAGGTCTTGGGATCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
||
3UTR CCA 72 bp | CAGCACTGCAGGAAGCAAGTCACTGATCCCAAGACCTaGCTTGGAAATAGTGCAGGGATGGACCACCAGCAA | + |
Preference number: 3 (lower is better) Translates to: QHCRKQVTDPKT*LGNSAGMDHQQ Trigger: TTGCTGGTGGTCCATCCCTGCACTATTTCCAAGCCAGGTCTTGGGATCAGTGACTTGCTTCCTGCAGTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
||
3UTR CCA 72 bp | AGGACCCTGTCTCCACATGGTATCTTAGAAACCTCGTaGGTGGCAGACAGCTACTGGATCCTGTTTGCGCCA | + |
Preference number: 3 (lower is better) Translates to: RTLSPHGILETS*VADSYWILFAP Trigger: TGGCGCAAACAGGATCCAGTAGCTGTCTGCCACCCACGAGGTTTCTAAGATACCATGTGGAGACAGGGTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
||
3UTR GCA 72 bp | TGTCCCTCCCTACTCTTAAGTATATTAGCTTCTGTGTaGCCAGCTGGCCTGCCCCTTGGCCTAGACCTGAAA | + |
Preference number: 3 (lower is better) Translates to: CPSLLLSILASV*PAGLPLGLDLK Trigger: TTTCAGGTCTAGGCCAAGGGGCAGGCCAGCTGGGCACACAGAAGCTAATATACTTAAGAGTAGGGAGGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
||
3UTR GCA 72 bp | TCAGTCTCTTGGCATTCTGCTGCACAAAAAGAAATCTaGACACCGAGCCCCTCAGCCTGCCAAGCTGCTAGA | + |
Preference number: 3 (lower is better) Translates to: SVSWHSAAQKEI*TPSPSACQAAR Trigger: TCTAGCAGCTTGGCAGGCTGAGGGGCTCGGTGTGCAGATTTCTTTTTGTGCAGCAGAATGCCAAGAGACTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
||
3UTR CCA 72 bp | AGGAGCTTCACATTACAGGGTCTAGAAAGAGGCCGCTaGGGAGACAGAAGAATGAGAGATGAGGCAGTGGGA | + |
Preference number: 3 (lower is better) Translates to: RSFTLQGLERGR*GDRRMRDEAVG Trigger: TCCCACTGCCTCATCTCTCATTCTTCTGTCTCCCCAGCGGCCTCTTTCTAGACCCTGTAATGTGAAGCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
||
3UTR TCA 72 bp | TGTTCTCTCTTGGCCTTGGCACCAAGTTACTGCTGCTaGCACCAAGGCACCGTGACAATTCCAGGACAAATG | + |
Preference number: 3 (lower is better) Translates to: CSLLALAPSYCC*HQGTVTIPGQM Trigger: CATTTGTCCTGGAATTGTCACGGTGCCTTGGTGTCAGCAGCAGTAACTTGGTGCCAAGGCCAAGAGAGAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
||
3UTR TCA 72 bp | AGGGACAGGAGACCTGGAGACAAGGGGCCAACGGAATaGTACCCTGATTCTTCATCTCAAAGATGGAACCTG | + |
Preference number: 3 (lower is better) Translates to: RDRRPGDKGPTE*YPDSSSQRWNL Trigger: CAGGTTCCATCTTTGAGATGAAGAATCAGGGTATCATTCCGTTGGCCCCTTGTCTCCAGGTCTCCTGTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR GCA 72 bp | AGAAGCAAACTGCATGTTTCCAACTTCACCGACTTCTaGAGCACAGTGAGGTGGCAGGGCATTAGAGACCTG | + |
Preference number: 3 (lower is better) Translates to: RSKLHVSNFTDF*STVRWQGIRDL Trigger: CAGGTCTCTAATGCCCTGCCACCTCACTGTGCTGCAGAAGTCGGTGAAGTTGGAAACATGCAGTTTGCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
||
3UTR GCA 72 bp | TGCCAAGGACACGTGAGCTGCTGTACAGAAGCAAACTaGATGTTTCCAACTTCACCGACTTCTGCAGCACAG | + |
Preference number: 3 (lower is better) Translates to: CQGHVSCCTEAN*MFPTSPTSAAQ Trigger: CTGTGCTGCAGAAGTCGGTGAAGTTGGAAACATGCAGTTTGCTTCTGTACAGCAGCTCACGTGTCCTTGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR CCA 72 bp | CACGCACACATCAGAACGAGCAGGTCTGAGAGGTGCTaGCAGCAGTTTGTCTCTCAGGTAAAACGTCTGAAA | + |
Preference number: 3 (lower is better) Translates to: HAHIRTSRSERC*QQFVSQVKRLK Trigger: TTTCAGACGTTTTACCTGAGAGACAAACTGCTGCCAGCACCTCTCAGACCTGCTCGTTCTGATGTGTGCGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
||
3UTR CCA 72 bp | TCCCAAAGCAGCAAAGGCCTCAGGGACCTTGAACAATaGCTCCCGGCCAGTCTCCTTAAATCACAACAGAAA | + |
Preference number: 3 (lower is better) Translates to: SQSSKGLRDLEQ*LPASLLKSQQK Trigger: TTTCTGTTGTGATTTAAGGAGACTGGCCGGGAGCCATTGTTCAAGGTCCCTGAGGCCTTTGCTGCTTTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR TCA 72 bp | AAGCTCCAGAAACTGGTAAAAGACAAAGCTGGGCTCTaGCCAGCAGCTGGGTGGAAGGAGCTTCACATTACA | + |
Preference number: 3 (lower is better) Translates to: KLQKLVKDKAGL*PAAGWKELHIT Trigger: TGTAATGTGAAGCTCCTTCCACCCAGCTGCTGGTCAGAGCCCAGCTTTGTCTTTTACCAGTTTCTGGAGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
||
3UTR TCA 72 bp | GGAAGAGGACCATACCTTGGCTTTGCCAAGGACACGTaGGCTGCTGTACAGAAGCAAACTGCATGTTTCCAA | + |
Preference number: 3 (lower is better) Translates to: GRGPYLGFAKDT*AAVQKQTACFQ Trigger: TTGGAAACATGCAGTTTGCTTCTGTACAGCAGCTCACGTGTCCTTGGCAAAGCCAAGGTATGGTCCTCTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR GCA 72 bp | GTAAAACGTCTGAAAAAGGAAAGGCATCTAGCACTTTaGTCCCTGGCCAATGGCTCTGAAGGGCTGGACAGT | + |
Preference number: 3 (lower is better) Translates to: VKRLKKERHLAL*SLANGSEGLDS Trigger: ACTGTCCAGCCCTTCAGAGCCATTGGCCAGGGAGCAAAGTGCTAGATGCCTTTCCTTTTTCAGACGTTTTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR-3UTR CAA 90 bp | CTCAGAAAGAGAACAACCCAGCCTGAACACAGCCCCTTAACCCCATCATTACACCACTTGGGTTCCATTTaGTCTCTTCAGAGAACACTC | + |
Preference number: 3 (lower is better) Translates to: LRKRTTQPEHSPLTPSLHHLGSI*SLQRTL Trigger: GAGTGTTCTCTGAAGAGACAAAATGGAACCCAAGTG...GTGTAATGATGGGGTTAAGGGGCTGTGTTCAGGCTGGGTTGTTCTCTTTCTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR GCA 72 bp | CTGGCAGCCCTTAGGGTAGGTTTTAAGAAGACTCTCTaGTCAGTCTCTTGGCATTCTGCTGCACAAAAAGAA | + |
Preference number: 3 (lower is better) Translates to: LAALRVGFKKTL*SVSWHSAAQKE Trigger: TTCTTTTTGTGCAGCAGAATGCCAAGAGACTGAGCAGAGAGTCTTCTTAAAACCTACCCTAAGGGCTGCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR CCA 72 bp | TTTTGTCTCTTCAGAGAACACTCCAAACCCAGGGGATaGGTGAACACCTTTGCTAGAAGCATTCAGGCTGAA | + |
Preference number: 3 (lower is better) Translates to: FCLFREHSKPRG*VNTFARSIQAE Trigger: TTCAGCCTGAATGCTTCTAGCAAAGGTGTTCACCCATCCCCTGGGTTTGGAGTGTTCTCTGAAGAGACAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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CDS-3UTR TCA 90 bp | GCTTTCTCTGTGGCCTGGCAGAGAAGCAGGAAGGAGGCTGGTAACTGCCGTCCTTGTCCACGAGGCGGATaGGGGGCATGGTGCTGCCGC | + |
Preference number: 4 (lower is better) Translates to: AFSVAWQRSRKEAGNCRPCPRGG*GAWCCR Trigger: GCGGCAGCACCATGCCCCTCATCCGCCTCGTGGACA...AGGACGGCAGTTACCAGCCTCCTTCCTGCTTCTCTGCCAGGCCACAGAGAAAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR TCA 90 bp | ACAGGGGCCATAGGAGCCTTCCCAAAAGCAGGCTGGGAAGTGCCAGGACCATGTTGTCCACGAGGCGGATaGGGGGCATGGTGCTGCCGC | + |
Preference number: 4 (lower is better) Translates to: TGAIGAFPKAGWEVPGPCCPRGG*GAWCCR Trigger: GCGGCAGCACCATGCCCCTCATCCGCCTCGTGGACA...ACATGGTCCTGGCACTTCCCAGCCTGCTTTTGGGAAGGCTCCTATGGCCCCTGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR TCA 90 bp | TCAGGACAGCAGCAGCTGCCTGGCCCCAGACCTACCACGGGCACATGGACCTGGGTGTCAGCCGCCGTGTaGAGAAGGGGTTCAGGTACT | + |
Preference number: 4 (lower is better) Translates to: SGQQQLPGPRPTTGTWTWVSAAV*RRGSGT Trigger: AGTACCTGAACCCCTTCTTCACACGGCGGCTGACAC...CCAGGTCCATGTGCCCGTGGTAGGTCTGGGGCCAGGCAGCTGCTGCTGTCCTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
||
CDS-3UTR TCA 90 bp | TCGTGGGTGGCAGACAGCTACTGGATCCTGTTTGCGCCAGGAGCGGCTGACCTCTGGTGGTGGTGCCGATaGGCTGACGCTTCTCCATGG | + |
Preference number: 4 (lower is better) Translates to: SWVADSYWILFAPGAADLWWWCR*ADASPW Trigger: CCATGGAGAAGCGTCAGCTCATCGGCACCACCACCA...GAGGTCAGCCGCTCCTGGCGCAAACAGGATCCAGTAGCTGTCTGCCACCCACGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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CDS-3UTR TCA 90 bp | TGGCAGACAGCTACTGGATCCTGTTTGCGCCAGGAGCGGCTGACCTCTACTACATGTCCACGAGGCGGATaGGGGGCATGGTGCTGCCGC | + |
Preference number: 4 (lower is better) Translates to: WQTATGSCLRQERLTSTTCPRGG*GAWCCR Trigger: GCGGCAGCACCATGCCCCTCATCCGCCTCGTGGACA...TGTAGTAGAGGTCAGCCGCTCCTGGCGCAAACAGGATCCAGTAGCTGTCTGCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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CDS-3UTR GCA 90 bp | GTGGCAGACAGCTACTGGATCCTGTTTGCGCCAGGAGCGGCTGACCTCTACTACTCCTCCTGCTGGGCCTaGTCTCCCGTCTGCACCGGA | + |
Preference number: 4 (lower is better) Translates to: VADSYWILFAPGAADLYYSSCWA*SPVCTG Trigger: TCCGGTGCAGACGGGAGAGCAGGCCCAGCAGGAGGA...GTAGTAGAGGTCAGCCGCTCCTGGCGCAAACAGGATCCAGTAGCTGTCTGCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
||
CDS-3UTR GCA 90 bp | ACAGGGGCCATAGGAGCCTTCCCAAAAGCAGGCTGGGAAGTGCCAGGACCATGTTCCTCCTGCTGGGCCTaGTCTCCCGTCTGCACCGGA | + |
Preference number: 4 (lower is better) Translates to: TGAIGAFPKAGWEVPGPCSSCWA*SPVCTG Trigger: TCCGGTGCAGACGGGAGAGCAGGCCCAGCAGGAGGA...ACATGGTCCTGGCACTTCCCAGCCTGCTTTTGGGAAGGCTCCTATGGCCCCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
||
CDS-3UTR GCA 90 bp | AGGCTGGTAACTGCCGTCCTCTGCGGGCCATCTTGTGTTCTGAGGAGGCTGAGTGTCATGCCGCTCGACTaGTCCTCCTGCTGGGCCTGC | + |
Preference number: 4 (lower is better) Translates to: RLVTAVLCGPSCVLRRLSVMPLD*SSCWAC Trigger: GCAGGCCCAGCAGGAGGAGCAGTCGAGCGGCATGAC...ACTCAGCCTCCTCAGAACACAAGATGGCCCGCAGAGGACGGCAGTTACCAGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
||
CDS-3UTR GCA 90 bp | AGGCTTTCTCTGTGGCCTGGCAGAGAAGCAGGAAGGAGGCTGGTAACTGCCGTCGTCATGCCGCTCGACTaGTCCTCCTGCTGGGCCTGC | + |
Preference number: 4 (lower is better) Translates to: RLSLWPGREAGRRLVTAVVMPLD*SSCWAC Trigger: GCAGGCCCAGCAGGAGGAGCAGTCGAGCGGCATGAC...GACGGCAGTTACCAGCCTCCTTCCTGCTTCTCTGCCAGGCCACAGAGAAAGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
||
CDS-3UTR CCA 90 bp | CAAGCAGCCTTCCAAGGCTTTCTCTGTGGCCTGGCAGAGAAGCAGGAAGGAGGCGACTGCTCCTCCTGCTaGGCCTGCTCTCCCGTCTGC | + |
Preference number: 4 (lower is better) Translates to: QAAFQGFLCGLAEKQEGGDCSSC*ACSPVC Trigger: GCAGACGGGAGAGCAGGCCCAGCAGGAGGAGCAGTC...GCCTCCTTCCTGCTTCTCTGCCAGGCCACAGAGAAAGCCTTGGAAGGCTGCTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
||
CDS-3UTR CCA 90 bp | AGGAAGGAGGCTGGTAACTGCCGTCCTCTGCGGGCCATCTTGTGTTCTGAGGAGGACTGCTCCTCCTGCTaGGCCTGCTCTCCCGTCTGC | + |
Preference number: 4 (lower is better) Translates to: RKEAGNCRPLRAILCSEEDCSSC*ACSPVC Trigger: GCAGACGGGAGAGCAGGCCCAGCAGGAGGAGCAGTC...CTCCTCAGAACACAAGATGGCCCGCAGAGGACGGCAGTTACCAGCCTCCTTCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
||
CDS-3UTR CCA 90 bp | GGAAGGAGGCTGGTAACTGCCGTCCTCTGCGGGCCATCTTGTGTTCTGAGGAGGGCTGACGCTTCTCCATaGGCTCCAGGCCCAGGTGCA | + |
Preference number: 4 (lower is better) Translates to: GRRLVTAVLCGPSCVLRRADASP*APGPGA Trigger: TGCACCTGGGCCTGGAGCCCATGGAGAAGCGTCAGC...CCTCCTCAGAACACAAGATGGCCCGCAGAGGACGGCAGTTACCAGCCTCCTTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR CCA 90 bp | GGGGCCATAGGAGCCTTCCCAAAAGCAGGCTGGGAAGTGCCAGGACCATGTCGAGCTGACGCTTCTCCATaGGCTCCAGGCCCAGGTGCA | + |
Preference number: 4 (lower is better) Translates to: GAIGAFPKAGWEVPGPCRADASP*APGPGA Trigger: TGCACCTGGGCCTGGAGCCCATGGAGAAGCGTCAGC...TCGACATGGTCCTGGCACTTCCCAGCCTGCTTTTGGGAAGGCTCCTATGGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR TCA 90 bp | GGAAGGAGGCTGGTAACTGCCGTCCTCTGCGGGCCATCTTGTGTTCTGAGGAGGTGGTGGTGGTGCCGATaGGCTGACGCTTCTCCATGG | + |
Preference number: 4 (lower is better) Translates to: GRRLVTAVLCGPSCVLRRWWWCR*ADASPW Trigger: CCATGGAGAAGCGTCAGCTCATCGGCACCACCACCA...CCTCCTCAGAACACAAGATGGCCCGCAGAGGACGGCAGTTACCAGCCTCCTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR TCA 90 bp | CCCCAAGCTCAGACCCCAGGCCCTTCCCAAAGCAGCAAAGGCCTCAGGGACCTTGTGTCAGCCGCCGTGTaGAGAAGGGGTTCAGGTACT | + |
Preference number: 4 (lower is better) Translates to: PQAQTPGPSQSSKGLRDLVSAAV*RRGSGT Trigger: AGTACCTGAACCCCTTCTTCACACGGCGGCTGACAC...AAGGTCCCTGAGGCCTTTGCTGCTTTGGGAAGGGCCTGGGGTCTGAGCTTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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CDS-3UTR TCA 90 bp | CATTGTGCCCACAGGGGCCATAGGAGCCTTCCCAAAAGCAGGCTGGGAAGTGCCATCATCCTCAGAGCCTaGCGGTCCCTGACGGACCTC | + |
Preference number: 4 (lower is better) Translates to: HCAHRGHRSLPKSRLGSAIILRA*RSLTDL Trigger: GAGGTCCGTCAGGGACCGTCAGGCTCTGAGGATGAT...GGCACTTCCCAGCCTGCTTTTGGGAAGGCTCCTATGGCCCCTGTGGGCACAATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR GCA 90 bp | TGGCAGACAGCTACTGGATCCTGTTTGCGCCAGGAGCGGCTGACCTCTACTACATCCTCCTGCTGGGCCTaGTCTCCCGTCTGCACCGGA | + |
Preference number: 4 (lower is better) Translates to: WQTATGSCLRQERLTSTTSSCWA*SPVCTG Trigger: TCCGGTGCAGACGGGAGAGCAGGCCCAGCAGGAGGA...TGTAGTAGAGGTCAGCCGCTCCTGGCGCAAACAGGATCCAGTAGCTGTCTGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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CDS-3UTR GCA 90 bp | TCCAAGGCTTTCTCTGTGGCCTGGCAGAGAAGCAGGAAGGAGGCTGGTAACTGCCTCGACTGCTCCTCCTaGTGGGCCTGCTCTCCCGTC | + |
Preference number: 4 (lower is better) Translates to: SKAFSVAWQRSRKEAGNCLDCSS*WACSPV Trigger: GACGGGAGAGCAGGCCCAGCAGGAGGAGCAGTCGAG...GCAGTTACCAGCCTCCTTCCTGCTTCTCTGCCAGGCCACAGAGAAAGCCTTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR CCA 90 bp | ACAGGGGCCATAGGAGCCTTCCCAAAAGCAGGCTGGGAAGTGCCAGGACCATGTGCTGACGCTTCTCCATaGGCTCCAGGCCCAGGTGCA | + |
Preference number: 4 (lower is better) Translates to: TGAIGAFPKAGWEVPGPCADASP*APGPGA Trigger: TGCACCTGGGCCTGGAGCCCATGGAGAAGCGTCAGC...ACATGGTCCTGGCACTTCCCAGCCTGCTTTTGGGAAGGCTCCTATGGCCCCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR TCA 90 bp | GCCCACAGGGGCCATAGGAGCCTTCCCAAAAGCAGGCTGGGAAGTGCCAGGACCACACCCAAGGTGGTGTaGAGGGTGAAGTTGAAGGTC | + |
Preference number: 4 (lower is better) Translates to: AHRGHRSLPKSRLGSARTTPKVV*RVKLKV Trigger: GACCTTCAACTTCACCCTTCACACCACCTTGGGTGT...GGTCCTGGCACTTCCCAGCCTGCTTTTGGGAAGGCTCCTATGGCCCCTGTGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR TCA 90 bp | AGGCTGGTAACTGCCGTCCTCTGCGGGCCATCTTGTGTTCTGAGGAGGCTGAGTATCATCCTCAGAGCCTaGCGGTCCCTGACGGACCTC | + |
Preference number: 4 (lower is better) Translates to: RLVTAVLCGPSCVLRRLSIILRA*RSLTDL Trigger: GAGGTCCGTCAGGGACCGTCAGGCTCTGAGGATGAT...ACTCAGCCTCCTCAGAACACAAGATGGCCCGCAGAGGACGGCAGTTACCAGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR GCA 90 bp | ACACCAAGGCACCGTGACAATTCCAGGACAAATGGCAGATGTGCCTGCCAGCTGCTCGACTGCTCCTCCTaGTGGGCCTGCTCTCCCGTC | + |
Preference number: 4 (lower is better) Translates to: TPRHRDNSRTNGRCACQLLDCSS*WACSPV Trigger: GACGGGAGAGCAGGCCCAGCAGGAGGAGCAGTCGAG...CAGCTGGCAGGCACATCTGCCATTTGTCCTGGAATTGTCACGGTGCCTTGGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR GCA 90 bp | GGGGCCTGTGACCACAGCACTGCAGGAAGCAAGTCACTGATCCCAAGACCTGGCTCAAGCCAGTCAGCGTaGCAAGTGCTGCGGAGCCAA | + |
Preference number: 4 (lower is better) Translates to: GACDHSTAGSKSLIPRPGSSQSA*QVLRSQ Trigger: TTGGCTCCGCAGCACTTGGCACGCTGACTGGCTTGA...GCCAGGTCTTGGGATCAGTGACTTGCTTCCTGCAGTGCTGTGGTCACAGGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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CDS-3UTR CCA 90 bp | GCCCACAGGGGCCATAGGAGCCTTCCCAAAAGCAGGCTGGGAAGTGCCAGGACCCGCAATAGTGGCGACTaGGTCGACTGCAGATATCAG | + |
Preference number: 4 (lower is better) Translates to: AHRGHRSLPKSRLGSARTRNSGD*VDCRYQ Trigger: CTGATATCTGCAGTCGACCCAGTCGCCACTATTGCG...GGTCCTGGCACTTCCCAGCCTGCTTTTGGGAAGGCTCCTATGGCCCCTGTGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR TCA 90 bp | GGGGCCATAGGAGCCTTCCCAAAAGCAGGCTGGGAAGTGCCAGGACCATGTCGACTAGGACGAGGAGGCTaGAGAAAATGGTCATGCCGC | + |
Preference number: 4 (lower is better) Translates to: GAIGAFPKAGWEVPGPCRLGRGG*RKWSCR Trigger: GCGGCATGACCATTTTCTTCAGCCTCCTCGTCCTAG...TCGACATGGTCCTGGCACTTCCCAGCCTGCTTTTGGGAAGGCTCCTATGGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR TCA 90 bp | CAAGCAGCCTTCCAAGGCTTTCTCTGTGGCCTGGCAGAGAAGCAGGAAGGAGGCGCAGGTGCACCAGGATaGTGCAGATGGCTAGGACGA | + |
Preference number: 4 (lower is better) Translates to: QAAFQGFLCGLAEKQEGGAGAPG*CRWLGR Trigger: TCGTCCTAGCCATCTGCATCATCCTGGTGCACCTGC...GCCTCCTTCCTGCTTCTCTGCCAGGCCACAGAGAAAGCCTTGGAAGGCTGCTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047815.13 |
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CDS-3UTR TCA 90 bp | TTCCTCCCACAGGCTCTCGCTGCCTCCTGTTCCTATGCGCGTTCAGTTAACAGTGTGGTGCCGATGAGCTaGCGCTTCTCCATGGGCTCC | + |
Preference number: 4 (lower is better) Translates to: FLPQALAASCSYARSVNSVVPMS*RFSMGS Trigger: GGAGCCCATGGAGAAGCGTCAGCTCATCGGCACCAC...ACTGTTAACTGAACGCGCATAGGAACAGGAGGCAGCGAGAGCCTGTGGGAGGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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CDS-3UTR TCA 90 bp | CCTTCCCAAAAGCAGGCTGGGAAGTGCCAGGACCATGTCGAGAAAGTCCTTCAGGTGGTGCCGATGAGCTaGCGCTTCTCCATGGGCTCC | + |
Preference number: 4 (lower is better) Translates to: PSQKQAGKCQDHVEKVLQVVPMS*RFSMGS Trigger: GGAGCCCATGGAGAAGCGTCAGCTCATCGGCACCAC...CTGAAGGACTTTCTCGACATGGTCCTGGCACTTCCCAGCCTGCTTTTGGGAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR TCA 90 bp | AGCCTTCCCAAAAGCAGGCTGGGAAGTGCCAGGACCATGTCGAGAAAGTCCTTCGTGGTGCCGATGAGCTaGCGCTTCTCCATGGGCTCC | + |
Preference number: 4 (lower is better) Translates to: SLPKSRLGSARTMSRKSFVVPMS*RFSMGS Trigger: GGAGCCCATGGAGAAGCGTCAGCTCATCGGCACCAC...GAAGGACTTTCTCGACATGGTCCTGGCACTTCCCAGCCTGCTTTTGGGAAGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR TCA 90 bp | TCTGTGTGCCCAGCTGGCCTGCCCCTTGGCCTAGACCTGAAATGCAACTGGGGCCGTACTCTTCTTCAGTaGGCTCTGACAGGTGCTCTG | + |
Preference number: 4 (lower is better) Translates to: SVCPAGLPLGLDLKCNWGRTLLQ*ALTGAL Trigger: CAGAGCACCTGTCAGAGCTCACTGAAGAAGAGTACG...GCCCCAGTTGCATTTCAGGTCTAGGCCAAGGGGCAGGCCAGCTGGGCACACAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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CDS-3UTR GCA 90 bp | GGGGCCATAGGAGCCTTCCCAAAAGCAGGCTGGGAAGTGCCAGGACCATGTCGAGGCGACTGGGTCGACTaGAGATATCAGGGAGCCAAA | + |
Preference number: 4 (lower is better) Translates to: GAIGAFPKAGWEVPGPCRGDWVD*RYQGAK Trigger: TTTGGCTCCCTGATATCTGCAGTCGACCCAGTCGCC...TCGACATGGTCCTGGCACTTCCCAGCCTGCTTTTGGGAAGGCTCCTATGGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR GCA 90 bp | TCGTGGGTGGCAGACAGCTACTGGATCCTGTTTGCGCCAGGAGCGGCTGACCTCGCCTGTGAGAACGTTTaGCACCCACTGACATCTGAC | + |
Preference number: 4 (lower is better) Translates to: SWVADSYWILFAPGAADLACENV*HPLTSD Trigger: GTCAGATGTCAGTGGGTGGCAAACGTTCTCACAGGC...GAGGTCAGCCGCTCCTGGCGCAAACAGGATCCAGTAGCTGTCTGCCACCCACGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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CDS-3UTR GCA 90 bp | AGGAAGGAGGCTGGTAACTGCCGTCCTCTGCGGGCCATCTTGTGTTCTGAGGAGTCAAGCCAGTCAGCGTaGCAAGTGCTGCGGAGCCAA | + |
Preference number: 4 (lower is better) Translates to: RKEAGNCRPLRAILCSEESSQSA*QVLRSQ Trigger: TTGGCTCCGCAGCACTTGGCACGCTGACTGGCTTGA...CTCCTCAGAACACAAGATGGCCCGCAGAGGACGGCAGTTACCAGCCTCCTTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR GCA 90 bp | TCTGTGTGCCCAGCTGGCCTGCCCCTTGGCCTAGACCTGAAATGCAACTGGGGCGTTCGGAGAGTCTGCTaGATGAGGATCTGGGTGACT | + |
Preference number: 4 (lower is better) Translates to: SVCPAGLPLGLDLKCNWGVRRVC*MRIWVT Trigger: AGTCACCCAGATCCTCATGCAGCAGACTCTCCGAAC...GCCCCAGTTGCATTTCAGGTCTAGGCCAAGGGGCAGGCCAGCTGGGCACACAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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CDS-3UTR CCA 90 bp | GTGCCCACAGGGGCCATAGGAGCCTTCCCAAAAGCAGGCTGGGAAGTGCCAGGATCTCATGGGTTGTGTTaGAGAACTCCTCCTCCGCCA | + |
Preference number: 4 (lower is better) Translates to: VPTGAIGAFPKAGWEVPGSHGLC*RTPPPP Trigger: TGGCGGAGGAGGAGTTCTCCAACACAACCCATGAGA...TCCTGGCACTTCCCAGCCTGCTTTTGGGAAGGCTCCTATGGCCCCTGTGGGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR CCA 90 bp | ATAGGAGCCTTCCCAAAAGCAGGCTGGGAAGTGCCAGGACCATGTCGAGAAAGTGACTGCTCCTCCTGCTaGGCCTGCTCTCCCGTCTGC | + |
Preference number: 4 (lower is better) Translates to: IGAFPKAGWEVPGPCRESDCSSC*ACSPVC Trigger: GCAGACGGGAGAGCAGGCCCAGCAGGAGGAGCAGTC...ACTTTCTCGACATGGTCCTGGCACTTCCCAGCCTGCTTTTGGGAAGGCTCCTAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR CCA 90 bp | GTGCCCACAGGGGCCATAGGAGCCTTCCCAAAAGCAGGCTGGGAAGTGCCAGGACGCAATAGTGGCGACTaGGTCGACTGCAGATATCAG | + |
Preference number: 4 (lower is better) Translates to: VPTGAIGAFPKAGWEVPGRNSGD*VDCRYQ Trigger: CTGATATCTGCAGTCGACCCAGTCGCCACTATTGCG...TCCTGGCACTTCCCAGCCTGCTTTTGGGAAGGCTCCTATGGCCCCTGTGGGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR CCA 90 bp | GTGCCCACAGGGGCCATAGGAGCCTTCCCAAAAGCAGGCTGGGAAGTGCCAGGAGAGGATCTGGGTGACTaGGGAGAGGTTATGGTGTGT | + |
Preference number: 4 (lower is better) Translates to: VPTGAIGAFPKAGWEVPGEDLGD*GEVMVC Trigger: ACACACCATAACCTCTCCCCAGTCACCCAGATCCTC...TCCTGGCACTTCCCAGCCTGCTTTTGGGAAGGCTCCTATGGCCCCTGTGGGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR TCA 90 bp | AGGAAGGAGGCTGGTAACTGCCGTCCTCTGCGGGCCATCTTGTGTTCTGAGGAGCTAGGACGAGGAGGCTaGAGAAAATGGTCATGCCGC | + |
Preference number: 4 (lower is better) Translates to: RKEAGNCRPLRAILCSEELGRGG*RKWSCR Trigger: GCGGCATGACCATTTTCTTCAGCCTCCTCGTCCTAG...CTCCTCAGAACACAAGATGGCCCGCAGAGGACGGCAGTTACCAGCCTCCTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR TCA 90 bp | GGGGCCATAGGAGCCTTCCCAAAAGCAGGCTGGGAAGTGCCAGGACCATGTCGACAAACACCAGCATGTTaGGCACAGGGTCCACATGCA | + |
Preference number: 4 (lower is better) Translates to: GAIGAFPKAGWEVPGPCRQTPAC*AQGPHA Trigger: TGCATGTGGACCCTGTGCTCAACATGCTGGTGTTTG...TCGACATGGTCCTGGCACTTCCCAGCCTGCTTTTGGGAAGGCTCCTATGGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR TCA 90 bp | TCAGGACAGCAGCAGCTGCCTGGCCCCAGACCTACCACGGGCACATGGACCTGGACGTTTGCCACCCACTaGCATCTGACATATGTTTTC | + |
Preference number: 4 (lower is better) Translates to: SGQQQLPGPRPTTGTWTWTFATH*HLTYVF Trigger: GAAAACATATGTCAGATGTCAGTGGGTGGCAAACGT...CCAGGTCCATGTGCCCGTGGTAGGTCTGGGGCCAGGCAGCTGCTGCTGTCCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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CDS-3UTR TCA 90 bp | GGGGCCATAGGAGCCTTCCCAAAAGCAGGCTGGGAAGTGCCAGGACCATGTCGACGTACTCTTCTTCAGTaGGCTCTGACAGGTGCTCTG | + |
Preference number: 4 (lower is better) Translates to: GAIGAFPKAGWEVPGPCRRTLLQ*ALTGAL Trigger: CAGAGCACCTGTCAGAGCTCACTGAAGAAGAGTACG...TCGACATGGTCCTGGCACTTCCCAGCCTGCTTTTGGGAAGGCTCCTATGGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR TCA 90 bp | GCCATAGGAGCCTTCCCAAAAGCAGGCTGGGAAGTGCCAGGACCATGTCGAGAAGTGTCAGCCGCCGTGTaGAGAAGGGGTTCAGGTACT | + |
Preference number: 4 (lower is better) Translates to: AIGAFPKAGWEVPGPCREVSAAV*RRGSGT Trigger: AGTACCTGAACCCCTTCTTCACACGGCGGCTGACAC...TTCTCGACATGGTCCTGGCACTTCCCAGCCTGCTTTTGGGAAGGCTCCTATGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR TCA 90 bp | CTGACACCAAGGCACCGTGACAATTCCAGGACAAATGGCAGATGTGCCTGCCAGATCATCCTCAGAGCCTaGCGGTCCCTGACGGACCTC | + |
Preference number: 4 (lower is better) Translates to: LTPRHRDNSRTNGRCACQIILRA*RSLTDL Trigger: GAGGTCCGTCAGGGACCGTCAGGCTCTGAGGATGAT...CTGGCAGGCACATCTGCCATTTGTCCTGGAATTGTCACGGTGCCTTGGTGTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR GCA 90 bp | AAAAGGGCAGGTGAGGACATCAGGCAACAACCATTGCTTGTGGTAGGATCCAGCGTCATGCCGCTCGACTaGTCCTCCTGCTGGGCCTGC | + |
Preference number: 4 (lower is better) Translates to: KRAGEDIRQQPLLVVGSSVMPLD*SSCWAC Trigger: GCAGGCCCAGCAGGAGGAGCAGTCGAGCGGCATGAC...GCTGGATCCTACCACAAGCAATGGTTGTTGCCTGATGTCCTCACCTGCCCTTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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CDS-3UTR CCA 90 bp | CATTGTGCCCACAGGGGCCATAGGAGCCTTCCCAAAAGCAGGCTGGGAAGTGCCTCTCATGGGTTGTGTTaGAGAACTCCTCCTCCGCCA | + |
Preference number: 4 (lower is better) Translates to: HCAHRGHRSLPKSRLGSASHGLC*RTPPPP Trigger: TGGCGGAGGAGGAGTTCTCCAACACAACCCATGAGA...GGCACTTCCCAGCCTGCTTTTGGGAAGGCTCCTATGGCCCCTGTGGGCACAATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR TCA 90 bp | ACACCAAGGCACCGTGACAATTCCAGGACAAATGGCAGATGTGCCTGCCAGCTGGTAGCCAAGGGCCTGTaGGAACGTTTGCCACCCACT | + |
Preference number: 4 (lower is better) Translates to: TPRHRDNSRTNGRCACQLVAKGL*ERLPPT Trigger: AGTGGGTGGCAAACGTTCTCACAGGCCCTTGGCTAC...CAGCTGGCAGGCACATCTGCCATTTGTCCTGGAATTGTCACGGTGCCTTGGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR TCA 90 bp | AGGAAGGAGGCTGGTAACTGCCGTCCTCTGCGGGCCATCTTGTGTTCTGAGGAGACAGAGGGAAGATGTTaGCGGCTCTGCCAAACAGGA | + |
Preference number: 4 (lower is better) Translates to: RKEAGNCRPLRAILCSEETEGRC*RLCQTG Trigger: TCCTGTTTGGCAGAGCCGTCAACATCTTCCCTCTGT...CTCCTCAGAACACAAGATGGCCCGCAGAGGACGGCAGTTACCAGCCTCCTTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR TCA 90 bp | CCAAGGCTTTCTCTGTGGCCTGGCAGAGAAGCAGGAAGGAGGCTGGTAACTGCCACAGAGGGAAGATGTTaGCGGCTCTGCCAAACAGGA | + |
Preference number: 4 (lower is better) Translates to: PRLSLWPGREAGRRLVTATEGRC*RLCQTG Trigger: TCCTGTTTGGCAGAGCCGTCAACATCTTCCCTCTGT...GGCAGTTACCAGCCTCCTTCCTGCTTCTCTGCCAGGCCACAGAGAAAGCCTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR TCA 90 bp | AGGAAGGAGGCTGGTAACTGCCGTCCTCTGCGGGCCATCTTGTGTTCTGAGGAGCGTACTCTTCTTCAGTaGGCTCTGACAGGTGCTCTG | + |
Preference number: 4 (lower is better) Translates to: RKEAGNCRPLRAILCSEERTLLQ*ALTGAL Trigger: CAGAGCACCTGTCAGAGCTCACTGAAGAAGAGTACG...CTCCTCAGAACACAAGATGGCCCGCAGAGGACGGCAGTTACCAGCCTCCTTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR TCA 90 bp | GCCCACAGGGGCCATAGGAGCCTTCCCAAAAGCAGGCTGGGAAGTGCCAGGACCTTATTACTGCTCCCATaGGAATACCTAGGACGAGGA | + |
Preference number: 4 (lower is better) Translates to: AHRGHRSLPKSRLGSARTLLLLP*EYLGRG Trigger: TCCTCGTCCTAGGTATTCTCATGGGAGCAGTAATAA...GGTCCTGGCACTTCCCAGCCTGCTTTTGGGAAGGCTCCTATGGCCCCTGTGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR GCA 90 bp | TCCAAGGCTTTCTCTGTGGCCTGGCAGAGAAGCAGGAAGGAGGCTGGTAACTGCGGCGACTGGGTCGACTaGAGATATCAGGGAGCCAAA | + |
Preference number: 4 (lower is better) Translates to: SKAFSVAWQRSRKEAGNCGDWVD*RYQGAK Trigger: TTTGGCTCCCTGATATCTGCAGTCGACCCAGTCGCC...GCAGTTACCAGCCTCCTTCCTGCTTCTCTGCCAGGCCACAGAGAAAGCCTTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR GCA 90 bp | ACAGGGGCCATAGGAGCCTTCCCAAAAGCAGGCTGGGAAGTGCCAGGACCATGTGCCTGTGAGAACGTTTaGCACCCACTGACATCTGAC | + |
Preference number: 4 (lower is better) Translates to: TGAIGAFPKAGWEVPGPCACENV*HPLTSD Trigger: GTCAGATGTCAGTGGGTGGCAAACGTTCTCACAGGC...ACATGGTCCTGGCACTTCCCAGCCTGCTTTTGGGAAGGCTCCTATGGCCCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR GCA 90 bp | ACACCAAGGCACCGTGACAATTCCAGGACAAATGGCAGATGTGCCTGCCAGCTGTCAAGCCAGTCAGCGTaGCAAGTGCTGCGGAGCCAA | + |
Preference number: 4 (lower is better) Translates to: TPRHRDNSRTNGRCACQLSSQSA*QVLRSQ Trigger: TTGGCTCCGCAGCACTTGGCACGCTGACTGGCTTGA...CAGCTGGCAGGCACATCTGCCATTTGTCCTGGAATTGTCACGGTGCCTTGGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
||
CDS-3UTR GCA 90 bp | CAAGCAGCCTTCCAAGGCTTTCTCTGTGGCCTGGCAGAGAAGCAGGAAGGAGGCACAGTTCGGAGAGTCTaGTGCATGAGGATCTGGGTG | + |
Preference number: 4 (lower is better) Translates to: QAAFQGFLCGLAEKQEGGTVRRV*CMRIWV Trigger: CACCCAGATCCTCATGCAGCAGACTCTCCGAACTGT...GCCTCCTTCCTGCTTCTCTGCCAGGCCACAGAGAAAGCCTTGGAAGGCTGCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR CCA 90 bp | CCAAGGCTTTCTCTGTGGCCTGGCAGAGAAGCAGGAAGGAGGCTGGTAACTGCCTCTCATGGGTTGTGTTaGAGAACTCCTCCTCCGCCA | + |
Preference number: 4 (lower is better) Translates to: PRLSLWPGREAGRRLVTASHGLC*RTPPPP Trigger: TGGCGGAGGAGGAGTTCTCCAACACAACCCATGAGA...GGCAGTTACCAGCCTCCTTCCTGCTTCTCTGCCAGGCCACAGAGAAAGCCTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR CCA 90 bp | GCCCAGGCATGGTGTGAGATGAGCAAGCAGCCTTCCAAGGCTTTCTCTGTGGCCCGCAATAGTGGCGACTaGGTCGACTGCAGATATCAG | + |
Preference number: 4 (lower is better) Translates to: AQAWCEMSKQPSKAFSVARNSGD*VDCRYQ Trigger: CTGATATCTGCAGTCGACCCAGTCGCCACTATTGCG...GGCCACAGAGAAAGCCTTGGAAGGCTGCTTGCTCATCTCACACCATGCCTGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
||
CDS-3UTR CCA 90 bp | CAAGCAGCCTTCCAAGGCTTTCTCTGTGGCCTGGCAGAGAAGCAGGAAGGAGGCGAGGATCTGGGTGACTaGGGAGAGGTTATGGTGTGT | + |
Preference number: 4 (lower is better) Translates to: QAAFQGFLCGLAEKQEGGEDLGD*GEVMVC Trigger: ACACACCATAACCTCTCCCCAGTCACCCAGATCCTC...GCCTCCTTCCTGCTTCTCTGCCAGGCCACAGAGAAAGCCTTGGAAGGCTGCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR CCA 90 bp | GCTTTCTCTGTGGCCTGGCAGAGAAGCAGGAAGGAGGCTGGTAACTGCCGTCCTTGCTGCATGAGGATCTaGGTGACTGGGGAGAGGTTA | + |
Preference number: 4 (lower is better) Translates to: AFSVAWQRSRKEAGNCRPCCMRI*VTGERL Trigger: TAACCTCTCCCCAGTCACCCAGATCCTCATGCAGCA...AGGACGGCAGTTACCAGCCTCCTTCCTGCTTCTCTGCCAGGCCACAGAGAAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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3UTR CAA 72 bp | CAGGCCCTTCCCAAAGCAGCAAAGGCCTCAGGGACCTaGAACAATGGCTCCCGGCCAGTCTCCTTAAATCAC | + |
Preference number: 4 (lower is better) Translates to: QALPKAAKASGT*NNGSRPVSLNH Trigger: GTGATTTAAGGAGACTGGCCGGGAGCCATTGTTCAAGGTCCCTGAGGCCTTTGCTGCTTTGGGAAGGGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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CDS-3UTR TCA 90 bp | GTGCCCACAGGGGCCATAGGAGCCTTCCCAAAAGCAGGCTGGGAAGTGCCAGGAACATCATCTTGGGGGTaGTTTTGTGATCTCGGAAGA | + |
Preference number: 4 (lower is better) Translates to: VPTGAIGAFPKAGWEVPGTSSWG*FCDLGR Trigger: TCTTCCGAGATCACAAAATCACCCCCAAGATGATGT...TCCTGGCACTTCCCAGCCTGCTTTTGGGAAGGCTCCTATGGCCCCTGTGGGCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR TCA 90 bp | GTGCCCACAGGGGCCATAGGAGCCTTCCCAAAAGCAGGCTGGGAAGTGCCAGGATTATTACTGCTCCCATaGGAATACCTAGGACGAGGA | + |
Preference number: 4 (lower is better) Translates to: VPTGAIGAFPKAGWEVPGLLLLP*EYLGRG Trigger: TCCTCGTCCTAGGTATTCTCATGGGAGCAGTAATAA...TCCTGGCACTTCCCAGCCTGCTTTTGGGAAGGCTCCTATGGCCCCTGTGGGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR GCA 90 bp | GGAAGGAGGCTGGTAACTGCCGTCCTCTGCGGGCCATCTTGTGTTCTGAGGAGGGAGGACGATGGAGACTaGATCGTTGAGAATGCTTTC | + |
Preference number: 4 (lower is better) Translates to: GRRLVTAVLCGPSCVLRREDDGD*IVENAF Trigger: GAAAGCATTCTCAACGATGCAGTCTCCATCGTCCTC...CCTCCTCAGAACACAAGATGGCCCGCAGAGGACGGCAGTTACCAGCCTCCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR GCA 90 bp | AGGAAGGAGGCTGGTAACTGCCGTCCTCTGCGGGCCATCTTGTGTTCTGAGGAGCAGCGTGCCAAGTGCTaGGGAGCCAAAGAACATTTT | + |
Preference number: 4 (lower is better) Translates to: RKEAGNCRPLRAILCSEEQRAKC*GAKEHF Trigger: AAAATGTTCTTTGGCTCCGCAGCACTTGGCACGCTG...CTCCTCAGAACACAAGATGGCCCGCAGAGGACGGCAGTTACCAGCCTCCTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR GCA 90 bp | GCCCAGGCATGGTGTGAGATGAGCAAGCAGCCTTCCAAGGCTTTCTCTGTGGCCCAGCGTGCCAAGTGCTaGGGAGCCAAAGAACATTTT | + |
Preference number: 4 (lower is better) Translates to: AQAWCEMSKQPSKAFSVAQRAKC*GAKEHF Trigger: AAAATGTTCTTTGGCTCCGCAGCACTTGGCACGCTG...GGCCACAGAGAAAGCCTTGGAAGGCTGCTTGCTCATCTCACACCATGCCTGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR GCA 90 bp | CAAGCAGCCTTCCAAGGCTTTCTCTGTGGCCTGGCAGAGAAGCAGGAAGGAGGCCAGCGTGCCAAGTGCTaGGGAGCCAAAGAACATTTT | + |
Preference number: 4 (lower is better) Translates to: QAAFQGFLCGLAEKQEGGQRAKC*GAKEHF Trigger: AAAATGTTCTTTGGCTCCGCAGCACTTGGCACGCTG...GCCTCCTTCCTGCTTCTCTGCCAGGCCACAGAGAAAGCCTTGGAAGGCTGCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR TCA 90 bp | CCTTCCCAAAAGCAGGCTGGGAAGTGCCAGGACCATGTCGAGAAAGTCCTTCAGACACCCAAGGTGGTGTaGAGGGTGAAGTTGAAGGTC | + |
Preference number: 4 (lower is better) Translates to: PSQKQAGKCQDHVEKVLQTPKVV*RVKLKV Trigger: GACCTTCAACTTCACCCTTCACACCACCTTGGGTGT...CTGAAGGACTTTCTCGACATGGTCCTGGCACTTCCCAGCCTGCTTTTGGGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR TCA 90 bp | CCTTCCCAAAAGCAGGCTGGGAAGTGCCAGGACCATGTCGAGAAAGTCCTTCAGCAAACACCAGCATGTTaGGCACAGGGTCCACATGCA | + |
Preference number: 4 (lower is better) Translates to: PSQKQAGKCQDHVEKVLQQTPAC*AQGPHA Trigger: TGCATGTGGACCCTGTGCTCAACATGCTGGTGTTTG...CTGAAGGACTTTCTCGACATGGTCCTGGCACTTCCCAGCCTGCTTTTGGGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR TCA 90 bp | GATGGAGAAGCAGGGTCACTAGAAGGCCCTTCCTCCCACAGGCTCTCGCTGCCTACGTTTGCCACCCACTaGCATCTGACATATGTTTTC | + |
Preference number: 4 (lower is better) Translates to: DGEAGSLEGPSSHRLSLPTFATH*HLTYVF Trigger: GAAAACATATGTCAGATGTCAGTGGGTGGCAAACGT...AGGCAGCGAGAGCCTGTGGGAGGAAGGGCCTTCTAGTGACCCTGCTTCTCCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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CDS-3UTR TCA 90 bp | ACAGGGGCCATAGGAGCCTTCCCAAAAGCAGGCTGGGAAGTGCCAGGACCATGTAGCCAAAGAACATTTTaGGGAAGTAGCCAAGGGCCT | + |
Preference number: 4 (lower is better) Translates to: TGAIGAFPKAGWEVPGPCSQRTF*GSSQGP Trigger: AGGCCCTTGGCTACTTCCTCAAAATGTTCTTTGGCT...ACATGGTCCTGGCACTTCCCAGCCTGCTTTTGGGAAGGCTCCTATGGCCCCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR TCA 90 bp | ACAGGGGCCATAGGAGCCTTCCCAAAAGCAGGCTGGGAAGTGCCAGGACCATGTAAAACAGGATCGCCATaGTGCCTGAGAGTGAGATTC | + |
Preference number: 4 (lower is better) Translates to: TGAIGAFPKAGWEVPGPCKTGSP*CLRVRF Trigger: GAATCTCACTCTCAGGCATCATGGCGATCCTGTTTT...ACATGGTCCTGGCACTTCCCAGCCTGCTTTTGGGAAGGCTCCTATGGCCCCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR TCA 90 bp | AGGAAGGAGGCTGGTAACTGCCGTCCTCTGCGGGCCATCTTGTGTTCTGAGGAGAAAACAGGATCGCCATaGTGCCTGAGAGTGAGATTC | + |
Preference number: 4 (lower is better) Translates to: RKEAGNCRPLRAILCSEEKTGSP*CLRVRF Trigger: GAATCTCACTCTCAGGCATCATGGCGATCCTGTTTT...CTCCTCAGAACACAAGATGGCCCGCAGAGGACGGCAGTTACCAGCCTCCTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR TCA 90 bp | TCGTGGGTGGCAGACAGCTACTGGATCCTGTTTGCGCCAGGAGCGGCTGACCTCATGGTGTGTATAGTGTaGCATCACGATGCCAGAAAA | + |
Preference number: 4 (lower is better) Translates to: SWVADSYWILFAPGAADLMVCIV*HHDARK Trigger: TTTTCTGGCATCGTGATGTCACACTATACACACCAT...GAGGTCAGCCGCTCCTGGCGCAAACAGGATCCAGTAGCTGTCTGCCACCCACGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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CDS-3UTR TCA 90 bp | ACACAAGGCCACAAAGTGAGCGGCTCCAGTTCCAGGGCTAAGGTGAGAGACAAGACAGAGGGAAGATGTTaGCGGCTCTGCCAAACAGGA | + |
Preference number: 4 (lower is better) Translates to: TQGHKVSGSSSRAKVRDKTEGRC*RLCQTG Trigger: TCCTGTTTGGCAGAGCCGTCAACATCTTCCCTCTGT...CTTGTCTCTCACCTTAGCCCTGGAACTGGAGCCGCTCACTTTGTGGCCTTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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CDS-3UTR TCA 90 bp | CAAGCAGCCTTCCAAGGCTTTCTCTGTGGCCTGGCAGAGAAGCAGGAAGGAGGCTTGGGGGTGATTTTGTaGTCTCGGAAGAAGTTCAGC | + |
Preference number: 4 (lower is better) Translates to: QAAFQGFLCGLAEKQEGGLGVIL*SRKKFS Trigger: GCTGAACTTCTTCCGAGATCACAAAATCACCCCCAA...GCCTCCTTCCTGCTTCTCTGCCAGGCCACAGAGAAAGCCTTGGAAGGCTGCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR TCA 90 bp | AGGAAGGAGGCTGGTAACTGCCGTCCTCTGCGGGCCATCTTGTGTTCTGAGGAGTTGGGGGTGATTTTGTaGTCTCGGAAGAAGTTCAGC | + |
Preference number: 4 (lower is better) Translates to: RKEAGNCRPLRAILCSEELGVIL*SRKKFS Trigger: GCTGAACTTCTTCCGAGATCACAAAATCACCCCCAA...CTCCTCAGAACACAAGATGGCCCGCAGAGGACGGCAGTTACCAGCCTCCTTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR TCA 90 bp | CCAAGGCTTTCTCTGTGGCCTGGCAGAGAAGCAGGAAGGAGGCTGGTAACTGCCCATACCACTTATTGGTaGGGCTCTTCATCTGGATGC | + |
Preference number: 4 (lower is better) Translates to: PRLSLWPGREAGRRLVTAHTTYW*GSSSGC Trigger: GCATCCAGATGAAGAGCCTCACCAATAAGTGGTATG...GGCAGTTACCAGCCTCCTTCCTGCTTCTCTGCCAGGCCACAGAGAAAGCCTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR GCA 90 bp | ATAGGAGCCTTCCCAAAAGCAGGCTGGGAAGTGCCAGGACCATGTCGAGAAAGTGGCGACTGGGTCGACTaGAGATATCAGGGAGCCAAA | + |
Preference number: 4 (lower is better) Translates to: IGAFPKAGWEVPGPCRESGDWVD*RYQGAK Trigger: TTTGGCTCCCTGATATCTGCAGTCGACCCAGTCGCC...ACTTTCTCGACATGGTCCTGGCACTTCCCAGCCTGCTTTTGGGAAGGCTCCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR GCA 90 bp | CCTTCCCAAAAGCAGGCTGGGAAGTGCCAGGACCATGTCGAGAAAGTCCTTCAGGTTCGGAGAGTCTGCTaGATGAGGATCTGGGTGACT | + |
Preference number: 4 (lower is better) Translates to: PSQKQAGKCQDHVEKVLQVRRVC*MRIWVT Trigger: AGTCACCCAGATCCTCATGCAGCAGACTCTCCGAAC...CTGAAGGACTTTCTCGACATGGTCCTGGCACTTCCCAGCCTGCTTTTGGGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR GCA 90 bp | ACACCAAGGCACCGTGACAATTCCAGGACAAATGGCAGATGTGCCTGCCAGCTGACAGTTCGGAGAGTCTaGTGCATGAGGATCTGGGTG | + |
Preference number: 4 (lower is better) Translates to: TPRHRDNSRTNGRCACQLTVRRV*CMRIWV Trigger: CACCCAGATCCTCATGCAGCAGACTCTCCGAACTGT...CAGCTGGCAGGCACATCTGCCATTTGTCCTGGAATTGTCACGGTGCCTTGGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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3UTR CAA 72 bp | CGTAAAAGGGCAGGTGAGGACATCAGGCAACAACCATaGCTTGTGGTAGGATCCAGCCCCTTATCCTGCGAC | + |
Preference number: 4 (lower is better) Translates to: RKRAGEDIRQQP*LVVGSSPLSCD Trigger: GTCGCAGGATAAGGGGCTGGATCCTACCACAAGCAATGGTTGTTGCCTGATGTCCTCACCTGCCCTTTTACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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CDS-3UTR TCA 90 bp | ATAGGAGCCTTCCCAAAAGCAGGCTGGGAAGTGCCAGGACCATGTCGAGAAAGTACACCCAAGGTGGTGTaGAGGGTGAAGTTGAAGGTC | + |
Preference number: 4 (lower is better) Translates to: IGAFPKAGWEVPGPCRESTPKVV*RVKLKV Trigger: GACCTTCAACTTCACCCTTCACACCACCTTGGGTGT...ACTTTCTCGACATGGTCCTGGCACTTCCCAGCCTGCTTTTGGGAAGGCTCCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR TCA 90 bp | AGGAAGGAGGCTGGTAACTGCCGTCCTCTGCGGGCCATCTTGTGTTCTGAGGAGTGGAGACTGCATCGTTaGGAATGCTTTCTCCAAACA | + |
Preference number: 4 (lower is better) Translates to: RKEAGNCRPLRAILCSEEWRLHR*ECFLQT Trigger: TGTTTGGAGAAAGCATTCTCAACGATGCAGTCTCCA...CTCCTCAGAACACAAGATGGCCCGCAGAGGACGGCAGTTACCAGCCTCCTTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR TCA 90 bp | CAAGCAGCCTTCCAAGGCTTTCTCTGTGGCCTGGCAGAGAAGCAGGAAGGAGGCACGTTTGCCACCCACTaGCATCTGACATATGTTTTC | + |
Preference number: 4 (lower is better) Translates to: QAAFQGFLCGLAEKQEGGTFATH*HLTYVF Trigger: GAAAACATATGTCAGATGTCAGTGGGTGGCAAACGT...GCCTCCTTCCTGCTTCTCTGCCAGGCCACAGAGAAAGCCTTGGAAGGCTGCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR TCA 90 bp | CTCAGAAAGAGAACAACCCAGCCTGAACACAGCCCCTTAACCCCATCATTACACGTAGCCAAGGGCCTGTaGGAACGTTTGCCACCCACT | + |
Preference number: 4 (lower is better) Translates to: LRKRTTQPEHSPLTPSLHVAKGL*ERLPPT Trigger: AGTGGGTGGCAAACGTTCTCACAGGCCCTTGGCTAC...GTGTAATGATGGGGTTAAGGGGCTGTGTTCAGGCTGGGTTGTTCTCTTTCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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CDS-3UTR TCA 90 bp | GCCATAGGAGCCTTCCCAAAAGCAGGCTGGGAAGTGCCAGGACCATGTCGAGAAAGCCAAAGAACATTTTaGGGAAGTAGCCAAGGGCCT | + |
Preference number: 4 (lower is better) Translates to: AIGAFPKAGWEVPGPCRESQRTF*GSSQGP Trigger: AGGCCCTTGGCTACTTCCTCAAAATGTTCTTTGGCT...TTCTCGACATGGTCCTGGCACTTCCCAGCCTGCTTTTGGGAAGGCTCCTATGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR TCA 90 bp | GGGGCCATAGGAGCCTTCCCAAAAGCAGGCTGGGAAGTGCCAGGACCATGTCGAATGGTGTGTATAGTGTaGCATCACGATGCCAGAAAA | + |
Preference number: 4 (lower is better) Translates to: GAIGAFPKAGWEVPGPCRMVCIV*HHDARK Trigger: TTTTCTGGCATCGTGATGTCACACTATACACACCAT...TCGACATGGTCCTGGCACTTCCCAGCCTGCTTTTGGGAAGGCTCCTATGGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR TCA 90 bp | CATCAGTGTAAACATTTTCATTGTGCCCACAGGGGCCATAGGAGCCTTCCCAAATGGTGGTGGTGCCGATaGGCTGACGCTTCTCCATGG | + |
Preference number: 4 (lower is better) Translates to: HQCKHFHCAHRGHRSLPKWWWCR*ADASPW Trigger: CCATGGAGAAGCGTCAGCTCATCGGCACCACCACCA...TTTGGGAAGGCTCCTATGGCCCCTGTGGGCACAATGAAAATGTTTACACTGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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CDS-3UTR GCA 90 bp | CTGACACCAAGGCACCGTGACAATTCCAGGACAAATGGCAGATGTGCCTGCCAGTACCGAATCAGCAGGTaGACCAGGATGATGCAGATG | + |
Preference number: 4 (lower is better) Translates to: LTPRHRDNSRTNGRCACQYRISR*TRMMQM Trigger: CATCTGCATCATCCTGGTGCACCTGCTGATTCGGTA...CTGGCAGGCACATCTGCCATTTGTCCTGGAATTGTCACGGTGCCTTGGTGTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047815.13 |
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CDS-3UTR GCA 90 bp | AGGCTTTCTCTGTGGCCTGGCAGAGAAGCAGGAAGGAGGCTGGTAACTGCCGTCAGGGTCCACATGCAGTaGGTTGAAAATCGCAATAGT | + |
Preference number: 4 (lower is better) Translates to: RLSLWPGREAGRRLVTAVRVHMQ*VENRNS Trigger: ACTATTGCGATTTTCAACGCACTGCATGTGGACCCT...GACGGCAGTTACCAGCCTCCTTCCTGCTTCTCTGCCAGGCCACAGAGAAAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR GCA 90 bp | CAGAGCTGGTGCTCAGTGAAGCTGGTGTGCAGAGCTAACATTCTCACCAAGCTCACAGTTCGGAGAGTCTaGTGCATGAGGATCTGGGTG | + |
Preference number: 4 (lower is better) Translates to: QSWCSVKLVCRANILTKLTVRRV*CMRIWV Trigger: CACCCAGATCCTCATGCAGCAGACTCTCCGAACTGT...GAGCTTGGTGAGAATGTTAGCTCTGCACACCAGCTTCACTGAGCACCAGCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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CDS-3UTR GCA 90 bp | CCAAGGCTTTCTCTGTGGCCTGGCAGAGAAGCAGGAAGGAGGCTGGTAACTGCCGGAGAGGCCAAGAAATaGAAACACACACGTTTCACA | + |
Preference number: 4 (lower is better) Translates to: PRLSLWPGREAGRRLVTAGEAKK*KHTRFT Trigger: TGTGAAACGTGTGTGTTTGCATTTCTTGGCCTCTCC...GGCAGTTACCAGCCTCCTTCCTGCTTCTCTGCCAGGCCACAGAGAAAGCCTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR CCA 90 bp | CAGAGCTGGTGCTCAGTGAAGCTGGTGTGCAGAGCTAACATTCTCACCAAGCTCTGCTGCATGAGGATCTaGGTGACTGGGGAGAGGTTA | + |
Preference number: 4 (lower is better) Translates to: QSWCSVKLVCRANILTKLCCMRI*VTGERL Trigger: TAACCTCTCCCCAGTCACCCAGATCCTCATGCAGCA...GAGCTTGGTGAGAATGTTAGCTCTGCACACCAGCTTCACTGAGCACCAGCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR CAA 72 bp | AGGGCTAAGGTGAGAGACAAGGAAGAGGACCATACCTaGGCTTTGCCAAGGACACGTGAGCTGCTGTACAGA | + |
Preference number: 4 (lower is better) Translates to: RAKVRDKEEDHT*ALPRTRELLYR Trigger: TCTGTACAGCAGCTCACGTGTCCTTGGCAAAGCCAAGGTATGGTCCTCTTCCTTGTCTCTCACCTTAGCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR CAA 72 bp | ACTGCAGGAAGCAAGTCACTGATCCCAAGACCTGGCTaGGAAATAGTGCAGGGATGGACCACCAGCAAGTAC | + |
Preference number: 4 (lower is better) Translates to: TAGSKSLIPRPG*EIVQGWTTSKY Trigger: GTACTTGCTGGTGGTCCATCCCTGCACTATTTCCAAGCCAGGTCTTGGGATCAGTGACTTGCTTCCTGCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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CDS-3UTR TCA 90 bp | CATCAGTGTAAACATTTTCATTGTGCCCACAGGGGCCATAGGAGCCTTCCCAAAGTAGCCAAGGGCCTGTaGGAACGTTTGCCACCCACT | + |
Preference number: 4 (lower is better) Translates to: HQCKHFHCAHRGHRSLPKVAKGL*ERLPPT Trigger: AGTGGGTGGCAAACGTTCTCACAGGCCCTTGGCTAC...TTTGGGAAGGCTCCTATGGCCCCTGTGGGCACAATGAAAATGTTTACACTGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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CDS-3UTR TCA 90 bp | TTCCTCCCACAGGCTCTCGCTGCCTCCTGTTCCTATGCGCGTTCAGTTAACAGTAAAACAGGATCGCCATaGTGCCTGAGAGTGAGATTC | + |
Preference number: 4 (lower is better) Translates to: FLPQALAASCSYARSVNSKTGSP*CLRVRF Trigger: GAATCTCACTCTCAGGCATCATGGCGATCCTGTTTT...ACTGTTAACTGAACGCGCATAGGAACAGGAGGCAGCGAGAGCCTGTGGGAGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
||
CDS-3UTR TCA 90 bp | GCTTTCTCTGTGGCCTGGCAGAGAAGCAGGAAGGAGGCTGGTAACTGCCGTCCTATGGTGTGTATAGTGTaGCATCACGATGCCAGAAAA | + |
Preference number: 4 (lower is better) Translates to: AFSVAWQRSRKEAGNCRPMVCIV*HHDARK Trigger: TTTTCTGGCATCGTGATGTCACACTATACACACCAT...AGGACGGCAGTTACCAGCCTCCTTCCTGCTTCTCTGCCAGGCCACAGAGAAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
||
CDS-3UTR TCA 90 bp | GATGGAGAAGCAGGGTCACTAGAAGGCCCTTCCTCCCACAGGCTCTCGCTGCCTGCACTATGCACCAGATaGCAAAGGAAATTTCAAACT | + |
Preference number: 4 (lower is better) Translates to: DGEAGSLEGPSSHRLSLPALCTR*QRKFQT Trigger: AGTTTGAAATTTCCTTTGTCATCTGGTGCATAGTGC...AGGCAGCGAGAGCCTGTGGGAGGAAGGGCCTTCTAGTGACCCTGCTTCTCCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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CDS-3UTR TCA 90 bp | CTGACACCAAGGCACCGTGACAATTCCAGGACAAATGGCAGATGTGCCTGCCAGCATACCACTTATTGGTaGGGCTCTTCATCTGGATGC | + |
Preference number: 4 (lower is better) Translates to: LTPRHRDNSRTNGRCACQHTTYW*GSSSGC Trigger: GCATCCAGATGAAGAGCCTCACCAATAAGTGGTATG...CTGGCAGGCACATCTGCCATTTGTCCTGGAATTGTCACGGTGCCTTGGTGTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR TCA 90 bp | CCTTCCCAAAAGCAGGCTGGGAAGTGCCAGGACCATGTCGAGAAAGTCCTTCAGCATACCACTTATTGGTaGGGCTCTTCATCTGGATGC | + |
Preference number: 4 (lower is better) Translates to: PSQKQAGKCQDHVEKVLQHTTYW*GSSSGC Trigger: GCATCCAGATGAAGAGCCTCACCAATAAGTGGTATG...CTGAAGGACTTTCTCGACATGGTCCTGGCACTTCCCAGCCTGCTTTTGGGAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR GCA 90 bp | AGGCTTTCTCTGTGGCCTGGCAGAGAAGCAGGAAGGAGGCTGGTAACTGCCGTCTATCAGGGAGCCAAATaGGAAACTGTCTGTCATGTT | + |
Preference number: 4 (lower is better) Translates to: RLSLWPGREAGRRLVTAVYQGAK*ETVCHV Trigger: AACATGACAGACAGTTTCGCATTTGGCTCCCTGATA...GACGGCAGTTACCAGCCTCCTTCCTGCTTCTCTGCCAGGCCACAGAGAAAGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR GCA 90 bp | TGGCAGACAGCTACTGGATCCTGTTTGCGCCAGGAGCGGCTGACCTCTACTACAAGGGTCCACATGCAGTaGGTTGAAAATCGCAATAGT | + |
Preference number: 4 (lower is better) Translates to: WQTATGSCLRQERLTSTTRVHMQ*VENRNS Trigger: ACTATTGCGATTTTCAACGCACTGCATGTGGACCCT...TGTAGTAGAGGTCAGCCGCTCCTGGCGCAAACAGGATCCAGTAGCTGTCTGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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CDS-3UTR CCA 90 bp | TGGCAGACAGCTACTGGATCCTGTTTGCGCCAGGAGCGGCTGACCTCTACTACAAAGTTGAAGGTCTCATaGGTTGTGTTGGAGAACTCC | + |
Preference number: 4 (lower is better) Translates to: WQTATGSCLRQERLTSTTKLKVS*VVLENS Trigger: GGAGTTCTCCAACACAACCCATGAGACCTTCAACTT...TGTAGTAGAGGTCAGCCGCTCCTGGCGCAAACAGGATCCAGTAGCTGTCTGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
||
CDS-3UTR CCA 90 bp | GCTTTCTCTGTGGCCTGGCAGAGAAGCAGGAAGGAGGCTGGTAACTGCCGTCCTTTCTGCCAGCCCATATaGCAGGTAAGCAAAAATGAT | + |
Preference number: 4 (lower is better) Translates to: AFSVAWQRSRKEAGNCRPFCQPI*QVSKND Trigger: ATCATTTTTGCTTACCTGCCATATGGGCTGGCAGAA...AGGACGGCAGTTACCAGCCTCCTTCCTGCTTCTCTGCCAGGCCACAGAGAAAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
||
CDS-3UTR CCA 90 bp | GCTAAAGTGCCAGGTACCCAAGGGCACCCATGTCCCTCCCTACTCTTAAGTATATGCTGCATGAGGATCTaGGTGACTGGGGAGAGGTTA | + |
Preference number: 4 (lower is better) Translates to: AKVPGTQGHPCPSLLLSICCMRI*VTGERL Trigger: TAACCTCTCCCCAGTCACCCAGATCCTCATGCAGCA...TATACTTAAGAGTAGGGAGGGACATGGGTGCCCTTGGGTACCTGGCACTTTAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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CDS-3UTR TCA 90 bp | ACACCAAGGCACCGTGACAATTCCAGGACAAATGGCAGATGTGCCTGCCAGCTGTGGAGACTGCATCGTTaGGAATGCTTTCTCCAAACA | + |
Preference number: 4 (lower is better) Translates to: TPRHRDNSRTNGRCACQLWRLHR*ECFLQT Trigger: TGTTTGGAGAAAGCATTCTCAACGATGCAGTCTCCA...CAGCTGGCAGGCACATCTGCCATTTGTCCTGGAATTGTCACGGTGCCTTGGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR TCA 90 bp | CAAGCAGCCTTCCAAGGCTTTCTCTGTGGCCTGGCAGAGAAGCAGGAAGGAGGCGCACTATGCACCAGATaGCAAAGGAAATTTCAAACT | + |
Preference number: 4 (lower is better) Translates to: QAAFQGFLCGLAEKQEGGALCTR*QRKFQT Trigger: AGTTTGAAATTTCCTTTGTCATCTGGTGCATAGTGC...GCCTCCTTCCTGCTTCTCTGCCAGGCCACAGAGAAAGCCTTGGAAGGCTGCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR TCA 90 bp | CTGACACCAAGGCACCGTGACAATTCCAGGACAAATGGCAGATGTGCCTGCCAGACATCATCTTGGGGGTaGTTTTGTGATCTCGGAAGA | + |
Preference number: 4 (lower is better) Translates to: LTPRHRDNSRTNGRCACQTSSWG*FCDLGR Trigger: TCTTCCGAGATCACAAAATCACCCCCAAGATGATGT...CTGGCAGGCACATCTGCCATTTGTCCTGGAATTGTCACGGTGCCTTGGTGTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR GCA 90 bp | CCTTCCCAAAAGCAGGCTGGGAAGTGCCAGGACCATGTCGAGAAAGTCCTTCAGGGAGAGGCCAAGAAATaGAAACACACACGTTTCACA | + |
Preference number: 4 (lower is better) Translates to: PSQKQAGKCQDHVEKVLQGEAKK*KHTRFT Trigger: TGTGAAACGTGTGTGTTTGCATTTCTTGGCCTCTCC...CTGAAGGACTTTCTCGACATGGTCCTGGCACTTCCCAGCCTGCTTTTGGGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR CCA 90 bp | CTGACACCAAGGCACCGTGACAATTCCAGGACAAATGGCAGATGTGCCTGCCAGAAGTTGAAGGTCTCATaGGTTGTGTTGGAGAACTCC | + |
Preference number: 4 (lower is better) Translates to: LTPRHRDNSRTNGRCACQKLKVS*VVLENS Trigger: GGAGTTCTCCAACACAACCCATGAGACCTTCAACTT...CTGGCAGGCACATCTGCCATTTGTCCTGGAATTGTCACGGTGCCTTGGTGTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR CCA 90 bp | GCCATAGGAGCCTTCCCAAAAGCAGGCTGGGAAGTGCCAGGACCATGTCGAGAATTCTGCCAGCCCATATaGCAGGTAAGCAAAAATGAT | + |
Preference number: 4 (lower is better) Translates to: AIGAFPKAGWEVPGPCREFCQPI*QVSKND Trigger: ATCATTTTTGCTTACCTGCCATATGGGCTGGCAGAA...TTCTCGACATGGTCCTGGCACTTCCCAGCCTGCTTTTGGGAAGGCTCCTATGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR CCA 90 bp | TCCAAGGCTTTCTCTGTGGCCTGGCAGAGAAGCAGGAAGGAGGCTGGTAACTGCTTCTGCCAGCCCATATaGCAGGTAAGCAAAAATGAT | + |
Preference number: 4 (lower is better) Translates to: SKAFSVAWQRSRKEAGNCFCQPI*QVSKND Trigger: ATCATTTTTGCTTACCTGCCATATGGGCTGGCAGAA...GCAGTTACCAGCCTCCTTCCTGCTTCTCTGCCAGGCCACAGAGAAAGCCTTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR TCA 90 bp | CAACTCTACCACTCACCAGCCTGTGCTGCCATGGCTCTAAAACAGGGCCACAGCTTATTACTGCTCCCATaGGAATACCTAGAGAAACCA | + |
Preference number: 4 (lower is better) Translates to: QLYHSPACAAMALKQGHSLLLLP*EYLEKP Trigger: TGGTTTCTCTAGGTATTCTCATGGGAGCAGTAATAA...GCTGTGGCCCTGTTTTAGAGCCATGGCAGCACAGGCTGGTGAGTGGTAGAGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047815.13 |
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CDS-3UTR GCA 90 bp | CTGGGCTCTGACCAGCAGCTGGGTGGAAGGAGCTTCACATTACAGGGTCTAGAATATCAGGGAGCCAAATaGGAAACTGTCTGTCATGTT | + |
Preference number: 4 (lower is better) Translates to: LGSDQQLGGRSFTLQGLEYQGAK*ETVCHV Trigger: AACATGACAGACAGTTTCGCATTTGGCTCCCTGATA...TTCTAGACCCTGTAATGTGAAGCTCCTTCCACCCAGCTGCTGGTCAGAGCCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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CDS-3UTR GCA 90 bp | GCTAAAGTGCCAGGTACCCAAGGGCACCCATGTCCCTCCCTACTCTTAAGTATAGAGGACGATGGAGACTaGATCGTTGAGAATGCTTTC | + |
Preference number: 4 (lower is better) Translates to: AKVPGTQGHPCPSLLLSIEDDGD*IVENAF Trigger: GAAAGCATTCTCAACGATGCAGTCTCCATCGTCCTC...TATACTTAAGAGTAGGGAGGGACATGGGTGCCCTTGGGTACCTGGCACTTTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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CDS-3UTR CCA 90 bp | CATCAGTGTAAACATTTTCATTGTGCCCACAGGGGCCATAGGAGCCTTCCCAAAGAGGATCTGGGTGACTaGGGAGAGGTTATGGTGTGT | + |
Preference number: 4 (lower is better) Translates to: HQCKHFHCAHRGHRSLPKEDLGD*GEVMVC Trigger: ACACACCATAACCTCTCCCCAGTCACCCAGATCCTC...TTTGGGAAGGCTCCTATGGCCCCTGTGGGCACAATGAAAATGTTTACACTGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR CAA 72 bp | AAGGTGAGAGACAAGGAAGAGGACCATACCTTGGCTTaGCCAAGGACACGTGAGCTGCTGTACAGAAGCAAA | + |
Preference number: 4 (lower is better) Translates to: KVRDKEEDHTLA*PRTRELLYRSK Trigger: TTTGCTTCTGTACAGCAGCTCACGTGTCCTTGGCAAAGCCAAGGTATGGTCCTCTTCCTTGTCTCTCACCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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CDS-3UTR TCA 90 bp | TCAGAGAAGAAAGAAACCCAGGCTTGTGAAGAGAGCCTTCAGTACAACTCTACCCAAACACCAGCATGTTaGGCACAGGGTCCACATGCA | + |
Preference number: 4 (lower is better) Translates to: SEKKETQACEESLQYNSTQTPAC*AQGPHA Trigger: TGCATGTGGACCCTGTGCTCAACATGCTGGTGTTTG...GGTAGAGTTGTACTGAAGGCTCTCTTCACAAGCCTGGGTTTCTTTCTTCTCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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CDS-3UTR TCA 90 bp | GCTAAAGTGCCAGGTACCCAAGGGCACCCATGTCCCTCCCTACTCTTAAGTATATGGAGACTGCATCGTTaGGAATGCTTTCTCCAAACA | + |
Preference number: 4 (lower is better) Translates to: AKVPGTQGHPCPSLLLSIWRLHR*ECFLQT Trigger: TGTTTGGAGAAAGCATTCTCAACGATGCAGTCTCCA...TATACTTAAGAGTAGGGAGGGACATGGGTGCCCTTGGGTACCTGGCACTTTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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CDS-3UTR GCA 90 bp | CATGTTTCCAACTTCACCGACTTCTGCAGCACAGTGAGGTGGCAGGGCATTAGAAGGGTCCACATGCAGTaGGTTGAAAATCGCAATAGT | + |
Preference number: 4 (lower is better) Translates to: HVSNFTDFCSTVRWQGIRRVHMQ*VENRNS Trigger: ACTATTGCGATTTTCAACGCACTGCATGTGGACCCT...TCTAATGCCCTGCCACCTCACTGTGCTGCAGAAGTCGGTGAAGTTGGAAACATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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CDS-3UTR GCA 90 bp | AGGGGACGTGGAGGTGACTCCCACACTTGGGTTCCATTTTGTCTCTTCAGAGAAGGAGAGGCCAAGAAATaGAAACACACACGTTTCACA | + |
Preference number: 4 (lower is better) Translates to: RGRGGDSHTWVPFCLFREGEAKK*KHTRFT Trigger: TGTGAAACGTGTGTGTTTGCATTTCTTGGCCTCTCC...TTCTCTGAAGAGACAAAATGGAACCCAAGTGTGGGAGTCACCTCCACGTCCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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3UTR CAA 72 bp | GTACCTGAGGTTAGAAACACCTGCATCAAGGCCTACTaGGTCCCCATTGTGAGTCAGGGCCATATACAACTA | + |
Preference number: 4 (lower is better) Translates to: VPEVRNTCIKAY*VPIVSQGHIQL Trigger: TAGTTGTATATGGCCCTGACTCACAATGGGGACCAAGTAGGCCTTGATGCAGGTGTTTCTAACCTCAGGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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CDS-3UTR TCA 90 bp | CATCAGTGTAAACATTTTCATTGTGCCCACAGGGGCCATAGGAGCCTTCCCAAAAGCCAAAGAACATTTTaGGGAAGTAGCCAAGGGCCT | + |
Preference number: 4 (lower is better) Translates to: HQCKHFHCAHRGHRSLPKSQRTF*GSSQGP Trigger: AGGCCCTTGGCTACTTCCTCAAAATGTTCTTTGGCT...TTTGGGAAGGCTCCTATGGCCCCTGTGGGCACAATGAAAATGTTTACACTGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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CDS-3UTR TCA 90 bp | CAGAGCTGGTGCTCAGTGAAGCTGGTGTGCAGAGCTAACATTCTCACCAAGCTCGCACTATGCACCAGATaGCAAAGGAAATTTCAAACT | + |
Preference number: 4 (lower is better) Translates to: QSWCSVKLVCRANILTKLALCTR*QRKFQT Trigger: AGTTTGAAATTTCCTTTGTCATCTGGTGCATAGTGC...GAGCTTGGTGAGAATGTTAGCTCTGCACACCAGCTTCACTGAGCACCAGCTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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CDS-3UTR GCA 90 bp | AGGGGACGTGGAGGTGACTCCCACACTTGGGTTCCATTTTGTCTCTTCAGAGAATATCAGGGAGCCAAATaGGAAACTGTCTGTCATGTT | + |
Preference number: 4 (lower is better) Translates to: RGRGGDSHTWVPFCLFREYQGAK*ETVCHV Trigger: AACATGACAGACAGTTTCGCATTTGGCTCCCTGATA...TTCTCTGAAGAGACAAAATGGAACCCAAGTGTGGGAGTCACCTCCACGTCCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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CDS-3UTR TCA 90 bp | CATCAGTGTAAACATTTTCATTGTGCCCACAGGGGCCATAGGAGCCTTCCCAAAACATCATCTTGGGGGTaGTTTTGTGATCTCGGAAGA | + |
Preference number: 4 (lower is better) Translates to: HQCKHFHCAHRGHRSLPKTSSWG*FCDLGR Trigger: TCTTCCGAGATCACAAAATCACCCCCAAGATGATGT...TTTGGGAAGGCTCCTATGGCCCCTGTGGGCACAATGAAAATGTTTACACTGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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CDS GCA 90 bp | CTGAAGAAAATGGTCATGCCGCTCGACTGCTCCTCCTGCTGGGCCTaGTCTCCCGTCTGCACCGGAAGGATAGGCTTGGCAGGTGTCGGC | + |
Preference number: 5 (lower is better) Translates to: LKKMVMPLDCSSCWA*SPVCTGRIGLAGVG Trigger: GCCGACACCTGCCAAGCCTATCCTTCCGGTGCAGACGGGAGAGCAGGCCCAGCAGGAGGAGCAGTCGAGCGGCATGACCATTTTCTTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS GCA 90 bp | ACGAGGAGGCTGAAGAAAATGGTCATGCCGCTCGACTGCTCCTCCTaGTGGGCCTGCTCTCCCGTCTGCACCGGAAGGATAGGCTTGGCA | + |
Preference number: 5 (lower is better) Translates to: TRRLKKMVMPLDCSS*WACSPVCTGRIGLA Trigger: TGCCAAGCCTATCCTTCCGGTGCAGACGGGAGAGCAGGCCCAGCAGGAGGAGCAGTCGAGCGGCATGACCATTTTCTTCAGCCTCCTCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR CAA 90 bp | TCGTGGGTGGCAGACAGCTACTGGATCCTGTTTGCGCCAGGAGCGGCTGACCTCGACAGAGGGAAGATGTaGACGGCTCTGCCAAACAGG | + |
Preference number: 5 (lower is better) Translates to: SWVADSYWILFAPGAADLDRGKM*TALPNR Trigger: CCTGTTTGGCAGAGCCGTCAACATCTTCCCTCTGTC...GAGGTCAGCCGCTCCTGGCGCAAACAGGATCCAGTAGCTGTCTGCCACCCACGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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CDS-3UTR CAA 90 bp | GAGGCAGAGGCACCTCCTGGTGCTCAGCAGAGCTGGTGCTCAGTGAAGCTGGTGAAGGGGTTCAGGTACTaGGCATCCAGCCACATGAAG | + |
Preference number: 5 (lower is better) Translates to: EAEAPPGAQQSWCSVKLVKGFRY*ASSHMK Trigger: CTTCATGTGGCTGGATGCCAAGTACCTGAACCCCTT...CACCAGCTTCACTGAGCACCAGCTCTGCTGAGCACCAGGAGGTGCCTCTGCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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CDS-3UTR CAA 90 bp | TCTGTGTGCCCAGCTGGCCTGCCCCTTGGCCTAGACCTGAAATGCAACTGGGGCTCCACATGCAGTGCGTaGAAAATCGCAATAGTGGCG | + |
Preference number: 5 (lower is better) Translates to: SVCPAGLPLGLDLKCNWGSTCSA*KIAIVA Trigger: CGCCACTATTGCGATTTTCAACGCACTGCATGTGGA...GCCCCAGTTGCATTTCAGGTCTAGGCCAAGGGGCAGGCCAGCTGGGCACACAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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CDS-3UTR CAA 90 bp | AGGAAGGAGGCTGGTAACTGCCGTCCTCTGCGGGCCATCTTGTGTTCTGAGGAGCCAAACACCAGCATGTaGAGCACAGGGTCCACATGC | + |
Preference number: 5 (lower is better) Translates to: RKEAGNCRPLRAILCSEEPNTSM*STGSTC Trigger: GCATGTGGACCCTGTGCTCAACATGCTGGTGTTTGG...CTCCTCAGAACACAAGATGGCCCGCAGAGGACGGCAGTTACCAGCCTCCTTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR CAA 90 bp | AGGAAGGAGGCTGGTAACTGCCGTCCTCTGCGGGCCATCTTGTGTTCTGAGGAGGACAGAGGGAAGATGTaGACGGCTCTGCCAAACAGG | + |
Preference number: 5 (lower is better) Translates to: RKEAGNCRPLRAILCSEEDRGKM*TALPNR Trigger: CCTGTTTGGCAGAGCCGTCAACATCTTCCCTCTGTC...CTCCTCAGAACACAAGATGGCCCGCAGAGGACGGCAGTTACCAGCCTCCTTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR CAA 90 bp | GGGGCCATAGGAGCCTTCCCAAAAGCAGGCTGGGAAGTGCCAGGACCATGTCGAAAGGGGTTCAGGTACTaGGCATCCAGCCACATGAAG | + |
Preference number: 5 (lower is better) Translates to: GAIGAFPKAGWEVPGPCRKGFRY*ASSHMK Trigger: CTTCATGTGGCTGGATGCCAAGTACCTGAACCCCTT...TCGACATGGTCCTGGCACTTCCCAGCCTGCTTTTGGGAAGGCTCCTATGGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR CAA 90 bp | ACACCAAGGCACCGTGACAATTCCAGGACAAATGGCAGATGTGCCTGCCAGCTGGTCTCATGGGTTGTGTaGGAGAACTCCTCCTCCGCC | + |
Preference number: 5 (lower is better) Translates to: TPRHRDNSRTNGRCACQLVSWVV*ENSSSA Trigger: GGCGGAGGAGGAGTTCTCCAACACAACCCATGAGAC...CAGCTGGCAGGCACATCTGCCATTTGTCCTGGAATTGTCACGGTGCCTTGGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR CAA 90 bp | AGGCTTTCTCTGTGGCCTGGCAGAGAAGCAGGAAGGAGGCTGGTAACTGCCGTCAGCCACATGAAGCCTTaGAGGTCCTGCTGTCTGATG | + |
Preference number: 5 (lower is better) Translates to: RLSLWPGREAGRRLVTAVSHMKP*RSCCLM Trigger: CATCAGACAGCAGGACCTCAAAGGCTTCATGTGGCT...GACGGCAGTTACCAGCCTCCTTCCTGCTTCTCTGCCAGGCCACAGAGAAAGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR CAA 90 bp | CCAAGGCTTTCTCTGTGGCCTGGCAGAGAAGCAGGAAGGAGGCTGGTAACTGCCTCCACATGCAGTGCGTaGAAAATCGCAATAGTGGCG | + |
Preference number: 5 (lower is better) Translates to: PRLSLWPGREAGRRLVTASTCSA*KIAIVA Trigger: CGCCACTATTGCGATTTTCAACGCACTGCATGTGGA...GGCAGTTACCAGCCTCCTTCCTGCTTCTCTGCCAGGCCACAGAGAAAGCCTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR CAA 90 bp | CCTTCCCAAAAGCAGGCTGGGAAGTGCCAGGACCATGTCGAGAAAGTCCTTCAGGACAGAGGGAAGATGTaGACGGCTCTGCCAAACAGG | + |
Preference number: 5 (lower is better) Translates to: PSQKQAGKCQDHVEKVLQDRGKM*TALPNR Trigger: CCTGTTTGGCAGAGCCGTCAACATCTTCCCTCTGTC...CTGAAGGACTTTCTCGACATGGTCCTGGCACTTCCCAGCCTGCTTTTGGGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR CAA 90 bp | GCCATAGGAGCCTTCCCAAAAGCAGGCTGGGAAGTGCCAGGACCATGTCGAGAAAAGGGGTTCAGGTACTaGGCATCCAGCCACATGAAG | + |
Preference number: 5 (lower is better) Translates to: AIGAFPKAGWEVPGPCREKGFRY*ASSHMK Trigger: CTTCATGTGGCTGGATGCCAAGTACCTGAACCCCTT...TTCTCGACATGGTCCTGGCACTTCCCAGCCTGCTTTTGGGAAGGCTCCTATGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR CAA 90 bp | CATGTTTCCAACTTCACCGACTTCTGCAGCACAGTGAGGTGGCAGGGCATTAGAGTCTCATGGGTTGTGTaGGAGAACTCCTCCTCCGCC | + |
Preference number: 5 (lower is better) Translates to: HVSNFTDFCSTVRWQGIRVSWVV*ENSSSA Trigger: GGCGGAGGAGGAGTTCTCCAACACAACCCATGAGAC...TCTAATGCCCTGCCACCTCACTGTGCTGCAGAAGTCGGTGAAGTTGGAAACATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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CDS-3UTR CAA 90 bp | AGCCTTCCCAAAAGCAGGCTGGGAAGTGCCAGGACCATGTCGAGAAAGTCCTTCAGCCACATGAAGCCTTaGAGGTCCTGCTGTCTGATG | + |
Preference number: 5 (lower is better) Translates to: SLPKSRLGSARTMSRKSFSHMKP*RSCCLM Trigger: CATCAGACAGCAGGACCTCAAAGGCTTCATGTGGCT...GAAGGACTTTCTCGACATGGTCCTGGCACTTCCCAGCCTGCTTTTGGGAAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR CAA 90 bp | CCTTCCCAAAAGCAGGCTGGGAAGTGCCAGGACCATGTCGAGAAAGTCCTTCAGAGCCACATGAAGCCTTaGAGGTCCTGCTGTCTGATG | + |
Preference number: 5 (lower is better) Translates to: PSQKQAGKCQDHVEKVLQSHMKP*RSCCLM Trigger: CATCAGACAGCAGGACCTCAAAGGCTTCATGTGGCT...CTGAAGGACTTTCTCGACATGGTCCTGGCACTTCCCAGCCTGCTTTTGGGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR CAA 90 bp | CAAGCAGCCTTCCAAGGCTTTCTCTGTGGCCTGGCAGAGAAGCAGGAAGGAGGCTCCTCATACCACTTATaGGTGAGGCTCTTCATCTGG | + |
Preference number: 5 (lower is better) Translates to: QAAFQGFLCGLAEKQEGGSSYHL*VRLFIW Trigger: CCAGATGAAGAGCCTCACCAATAAGTGGTATGAGGA...GCCTCCTTCCTGCTTCTCTGCCAGGCCACAGAGAAAGCCTTGGAAGGCTGCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR CAA 90 bp | AGGCTTTCTCTGTGGCCTGGCAGAGAAGCAGGAAGGAGGCTGGTAACTGCCGTCTCCTCATACCACTTATaGGTGAGGCTCTTCATCTGG | + |
Preference number: 5 (lower is better) Translates to: RLSLWPGREAGRRLVTAVSSYHL*VRLFIW Trigger: CCAGATGAAGAGCCTCACCAATAAGTGGTATGAGGA...GACGGCAGTTACCAGCCTCCTTCCTGCTTCTCTGCCAGGCCACAGAGAAAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS GCA 90 bp | ATGAGAATACCTAGAGAAACCACAGCCACGCTCTCAGGCAGAAAGTaGAGGCGGTACCGAATCAGCAGGTGCACCAGGATGATGCAGATG | + |
Preference number: 5 (lower is better) Translates to: MRIPRETTATLSGRK*RRYRISRCTRMMQM Trigger: CATCTGCATCATCCTGGTGCACCTGCTGATTCGGTACCGCCTGCACTTTCTGCCTGAGAGCGTGGCTGTGGTTTCTCTAGGTATTCTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047815.13 |
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CDS GCA 90 bp | GCAAACACACACGTTTCACACAGGAAGGCCACAGTTCGGAGAGTCTaGTGCATGAGGATCTGGGTGACTGGGGAGAGGTTATGGTGTGTA | + |
Preference number: 5 (lower is better) Translates to: ANTHVSHRKATVRRV*CMRIWVTGERLWCV Trigger: TACACACCATAACCTCTCCCCAGTCACCCAGATCCTCATGCAGCAGACTCTCCGAACTGTGGCCTTCCTGTGTGAAACGTGTGTGTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR CAA 90 bp | CCTTCCCAAAAGCAGGCTGGGAAGTGCCAGGACCATGTCGAGAAAGTCCTTCAGTCCACATGCAGTGCGTaGAAAATCGCAATAGTGGCG | + |
Preference number: 5 (lower is better) Translates to: PSQKQAGKCQDHVEKVLQSTCSA*KIAIVA Trigger: CGCCACTATTGCGATTTTCAACGCACTGCATGTGGA...CTGAAGGACTTTCTCGACATGGTCCTGGCACTTCCCAGCCTGCTTTTGGGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR CAA 90 bp | CATGTTTCCAACTTCACCGACTTCTGCAGCACAGTGAGGTGGCAGGGCATTAGACCAAACACCAGCATGTaGAGCACAGGGTCCACATGC | + |
Preference number: 5 (lower is better) Translates to: HVSNFTDFCSTVRWQGIRPNTSM*STGSTC Trigger: GCATGTGGACCCTGTGCTCAACATGCTGGTGTTTGG...TCTAATGCCCTGCCACCTCACTGTGCTGCAGAAGTCGGTGAAGTTGGAAACATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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CDS-3UTR CAA 90 bp | GCCATAGGAGCCTTCCCAAAAGCAGGCTGGGAAGTGCCAGGACCATGTCGAGAATCCTCATACCACTTATaGGTGAGGCTCTTCATCTGG | + |
Preference number: 5 (lower is better) Translates to: AIGAFPKAGWEVPGPCRESSYHL*VRLFIW Trigger: CCAGATGAAGAGCCTCACCAATAAGTGGTATGAGGA...TTCTCGACATGGTCCTGGCACTTCCCAGCCTGCTTTTGGGAAGGCTCCTATGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS CCA 90 bp | CACAGGGTCCACATGCAGTGCGTTGAAAATCGCAATAGTGGCGACTaGGTCGACTGCAGATATCAGGGAGCCAAATGCGAAACTGTCTGT | + |
Preference number: 5 (lower is better) Translates to: HRVHMQCVENRNSGD*VDCRYQGAKCETVC Trigger: ACAGACAGTTTCGCATTTGGCTCCCTGATATCTGCAGTCGACCCAGTCGCCACTATTGCGATTTTCAACGCACTGCATGTGGACCCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS GCA 90 bp | AGAATGCTTTCTCCAAACACCAGCATGTTGAGCACAGGGTCCACATaGAGTGCGTTGAAAATCGCAATAGTGGCGACTGGGTCGACTGCA | + |
Preference number: 5 (lower is better) Translates to: RMLSPNTSMLSTGST*SALKIAIVATGSTA Trigger: TGCAGTCGACCCAGTCGCCACTATTGCGATTTTCAACGCACTGCATGTGGACCCTGTGCTCAACATGCTGGTGTTTGGAGAAAGCATTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS-3UTR CAA 90 bp | CATCAGTGTAAACATTTTCATTGTGCCCACAGGGGCCATAGGAGCCTTCCCAAACCAAACACCAGCATGTaGAGCACAGGGTCCACATGC | + |
Preference number: 5 (lower is better) Translates to: HQCKHFHCAHRGHRSLPKPNTSM*STGSTC Trigger: GCATGTGGACCCTGTGCTCAACATGCTGGTGTTTGG...TTTGGGAAGGCTCCTATGGCCCCTGTGGGCACAATGAAAATGTTTACACTGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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CDS TCA 90 bp | CTACTACAAAAGCCGAGATTGCCGTTCCAAAGACAGCGAAGAGAGTaGTGGAACCGATGTTCTGAAAGAAGTTCCCCTTGTGCAGTGAGT | + |
Preference number: 5 (lower is better) Translates to: LLQKPRLPFQRQRRE*WNRCSERSSPCAVS Trigger: ACTCACTGCACAAGGGGAACTTCTTTCAGAACATCGGTTCCATCACTCTCTTCGCTGTCTTTGGAACGGCAATCTCGGCTTTTGTAGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS TCA 90 bp | AGAGTGAGATTCCTTCTGCCAGCCCATATGGCAGGTAAGCAAAAATaGTCATCATGCCAAACTCCAGGGAAGGCGTTTTCCTCAGGTCAA | + |
Preference number: 5 (lower is better) Translates to: RVRFLLPAHMAGKQK*SSCQTPGKAFSSGQ Trigger: TTGACCTGAGGAAAACGCCTTCCCTGGAGTTTGGCATGATGATCATTTTTGCTTACCTGCCATATGGGCTGGCAGAAGGAATCTCACTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS GCA 90 bp | ATCATCATGCCAAACTCCAGGGAAGGCGTTTTCCTCAGGTCAATGTaGTTCAACACTAATGCTGAAATCAAGCCAGTCAGCGTGCCAAGT | + |
Preference number: 5 (lower is better) Translates to: IIMPNSREGVFLRSM*FNTNAEIKPVSVPS Trigger: ACTTGGCACGCTGACTGGCTTGATTTCAGCATTAGTGTTGAAGCACATTGACCTGAGGAAAACGCCTTCCCTGGAGTTTGGCATGATGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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CDS CAA 72 bp | TGGGCCTGCTCTCCCGTCTGCACCGGAAGGATAGGCTaGGCAGGTGTCGGCAGCACCAGCTTCGTGGTGACA | + |
Preference number: 6 (lower is better) Translates to: WACSPVCTGRIG*AGVGSTSFVVT Trigger: TGTCACCACGAAGCTGGTGCTGCCGACACCTGCCAAGCCTATCCTTCCGGTGCAGACGGGAGAGCAGGCCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS TCA 72 bp | GGCCATGGTGGAGGTCCTCCTGTGTCAGCCGCCGTGTaGAGAAGGGGTTCAGGTACTTGGCATCCAGCCACA | + |
Preference number: 6 (lower is better) Translates to: GHGGGPPVSAAV*RRGSGTWHPAT Trigger: TGTGGCTGGATGCCAAGTACCTGAACCCCTTCTTCACACGGCGGCTGACACAGGAGGACCTCCACCATGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS GCA 72 bp | CTGAAGAAAATGGTCATGCCGCTCGACTGCTCCTCCTaGTGGGCCTGCTCTCCCGTCTGCACCGGAAGGATA | + |
Preference number: 6 (lower is better) Translates to: LKKMVMPLDCSS*WACSPVCTGRI Trigger: TATCCTTCCGGTGCAGACGGGAGAGCAGGCCCAGCAGGAGGAGCAGTCGAGCGGCATGACCATTTTCTTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS CAA 90 bp | ATGGCATTACCCATCTTCTCAGTCTTGCTGAGGTTGACGTCTTTCTaGCTCCTTCGGCGAGCCCGGGCATCCTCGATGTCCACGAGGCGG | + |
Preference number: 6 (lower is better) Translates to: MALPIFSVLLRLTSF*LLRRARASSMSTRR Trigger: CCGCCTCGTGGACATCGAGGATGCCCGGGCTCGCCGAAGGAGCAAGAAAGACGTCAACCTCAGCAAGACTGAGAAGATGGGTAATGCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS CCA 72 bp | CACTTATTGGTGAGGCTCTTCATCTGGATGCGGCCATaGTGGAGGTCCTCCTGTGTCAGCCGCCGTGTGAAG | + |
Preference number: 6 (lower is better) Translates to: HLLVRLFIWMRP*WRSSCVSRRVK Trigger: CTTCACACGGCGGCTGACACAGGAGGACCTCCACCATGGCCGCATCCAGATGAAGAGCCTCACCAATAAGTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS CAA 72 bp | CCCATCTTCTCAGTCTTGCTGAGGTTGACGTCTTTCTaGCTCCTTCGGCGAGCCCGGGCATCCTCGATGTCC | + |
Preference number: 6 (lower is better) Translates to: PIFSVLLRLTSF*LLRRARASSMS Trigger: GGACATCGAGGATGCCCGGGCTCGCCGAAGGAGCAAGAAAGACGTCAACCTCAGCAAGACTGAGAAGATGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS CAA 90 bp | AGGTCCTCCTGTGTCAGCCGCCGTGTGAAGAAGGGGTTCAGGTACTaGGCATCCAGCCACATGAAGCCTTTGAGGTCCTGCTGTCTGATG | + |
Preference number: 6 (lower is better) Translates to: RSSCVSRRVKKGFRY*ASSHMKPLRSCCLM Trigger: CATCAGACAGCAGGACCTCAAAGGCTTCATGTGGCTGGATGCCAAGTACCTGAACCCCTTCTTCACACGGCGGCTGACACAGGAGGACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS TCA 72 bp | ACGGTCCCTGACGGACCTCCTCATACCACTTATTGGTaGGGCTCTTCATCTGGATGCGGCCATGGTGGAGGT | + |
Preference number: 6 (lower is better) Translates to: TVPDGPPHTTYW*GSSSGCGHGGG Trigger: ACCTCCACCATGGCCGCATCCAGATGAAGAGCCTCACCAATAAGTGGTATGAGGAGGTCCGTCAGGGACCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS CCA 72 bp | TTATTGGTGAGGCTCTTCATCTGGATGCGGCCATGGTaGAGGTCCTCCTGTGTCAGCCGCCGTGTGAAGAAG | + |
Preference number: 6 (lower is better) Translates to: LLVRLFIWMRPW*RSSCVSRRVKK Trigger: CTTCTTCACACGGCGGCTGACACAGGAGGACCTCCACCATGGCCGCATCCAGATGAAGAGCCTCACCAATAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS CAA 90 bp | TGCTCTGACTCGATGGCATTACCCATCTTCTCAGTCTTGCTGAGGTaGACGTCTTTCTTGCTCCTTCGGCGAGCCCGGGCATCCTCGATG | + |
Preference number: 6 (lower is better) Translates to: CSDSMALPIFSVLLR*TSFLLLRRARASSM Trigger: CATCGAGGATGCCCGGGCTCGCCGAAGGAGCAAGAAAGACGTCAACCTCAGCAAGACTGAGAAGATGGGTAATGCCATCGAGTCAGAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS CAA 90 bp | TCTGACAGGTGCTCTGACTCGATGGCATTACCCATCTTCTCAGTCTaGCTGAGGTTGACGTCTTTCTTGCTCCTTCGGCGAGCCCGGGCA | + |
Preference number: 6 (lower is better) Translates to: SDRCSDSMALPIFSV*LRLTSFLLLRRARA Trigger: TGCCCGGGCTCGCCGAAGGAGCAAGAAAGACGTCAACCTCAGCAAGACTGAGAAGATGGGTAATGCCATCGAGTCAGAGCACCTGTCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS TCA 72 bp | GGCAGCACCAGCTTCGTGGTGACACCCAAGGTGGTGTaGAGGGTGAAGTTGAAGGTCTCATGGGTTGTGTTG | + |
Preference number: 6 (lower is better) Translates to: GSTSFVVTPKVV*RVKLKVSWVVL Trigger: CAACACAACCCATGAGACCTTCAACTTCACCCTTCACACCACCTTGGGTGTCACCACGAAGCTGGTGCTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS GCA 72 bp | CACGTTTCACACAGGAAGGCCACAGTTCGGAGAGTCTaGTGCATGAGGATCTGGGTGACTGGGGAGAGGTTA | + |
Preference number: 6 (lower is better) Translates to: HVSHRKATVRRV*CMRIWVTGERL Trigger: TAACCTCTCCCCAGTCACCCAGATCCTCATGCAGCAGACTCTCCGAACTGTGGCCTTCCTGTGTGAAACGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS CAA 72 bp | TCGATGGCATTACCCATCTTCTCAGTCTTGCTGAGGTaGACGTCTTTCTTGCTCCTTCGGCGAGCCCGGGCA | + |
Preference number: 6 (lower is better) Translates to: SMALPIFSVLLR*TSFLLLRRARA Trigger: TGCCCGGGCTCGCCGAAGGAGCAAGAAAGACGTCAACCTCAGCAAGACTGAGAAGATGGGTAATGCCATCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS TCA 72 bp | TCAGCGTGCCAAGTGCTGCGGAGCCAAAGAACATTTTaGGGAAGTAGCCAAGGGCCTGTGAGAACGTTTGCC | + |
Preference number: 6 (lower is better) Translates to: SACQVLRSQRTF*GSSQGPVRTFA Trigger: GGCAAACGTTCTCACAGGCCCTTGGCTACTTCCTCAAAATGTTCTTTGGCTCCGCAGCACTTGGCACGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS CAA 72 bp | ACCAGCATGTTGAGCACAGGGTCCACATGCAGTGCGTaGAAAATCGCAATAGTGGCGACTGGGTCGACTGCA | + |
Preference number: 6 (lower is better) Translates to: TSMLSTGSTCSA*KIAIVATGSTA Trigger: TGCAGTCGACCCAGTCGCCACTATTGCGATTTTCAACGCACTGCATGTGGACCCTGTGCTCAACATGCTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS GCA 72 bp | TCTCCAAACACCAGCATGTTGAGCACAGGGTCCACATaGAGTGCGTTGAAAATCGCAATAGTGGCGACTGGG | + |
Preference number: 6 (lower is better) Translates to: SPNTSMLSTGST*SALKIAIVATG Trigger: CCCAGTCGCCACTATTGCGATTTTCAACGCACTGCATGTGGACCCTGTGCTCAACATGCTGGTGTTTGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS CAA 90 bp | TCTCCAAACACCAGCATGTTGAGCACAGGGTCCACATGCAGTGCGTaGAAAATCGCAATAGTGGCGACTGGGTCGACTGCAGATATCAGG | + |
Preference number: 6 (lower is better) Translates to: SPNTSMLSTGSTCSA*KIAIVATGSTADIR Trigger: CCTGATATCTGCAGTCGACCCAGTCGCCACTATTGCGATTTTCAACGCACTGCATGTGGACCCTGTGCTCAACATGCTGGTGTTTGGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS CCA 72 bp | CACATGCAGTGCGTTGAAAATCGCAATAGTGGCGACTaGGTCGACTGCAGATATCAGGGAGCCAAATGCGAA | + |
Preference number: 6 (lower is better) Translates to: HMQCVENRNSGD*VDCRYQGAKCE Trigger: TTCGCATTTGGCTCCCTGATATCTGCAGTCGACCCAGTCGCCACTATTGCGATTTTCAACGCACTGCATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS CAA 72 bp | TGCTCTGACTCGATGGCATTACCCATCTTCTCAGTCTaGCTGAGGTTGACGTCTTTCTTGCTCCTTCGGCGA | + |
Preference number: 6 (lower is better) Translates to: CSDSMALPIFSV*LRLTSFLLLRR Trigger: TCGCCGAAGGAGCAAGAAAGACGTCAACCTCAGCAAGACTGAGAAGATGGGTAATGCCATCGAGTCAGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS TCA 72 bp | CTGGGTGACTGGGGAGAGGTTATGGTGTGTATAGTGTaGCATCACGATGCCAGAAAACAGGATCGCCATGAT | + |
Preference number: 6 (lower is better) Translates to: LGDWGEVMVCIV*HHDARKQDRHD Trigger: ATCATGGCGATCCTGTTTTCTGGCATCGTGATGTCACACTATACACACCATAACCTCTCCCCAGTCACCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS GCA 72 bp | TGCGTTGAAAATCGCAATAGTGGCGACTGGGTCGACTaGAGATATCAGGGAGCCAAATGCGAAACTGTCTGT | + |
Preference number: 6 (lower is better) Translates to: CVENRNSGDWVD*RYQGAKCETVC Trigger: ACAGACAGTTTCGCATTTGGCTCCCTGATATCTGCAGTCGACCCAGTCGCCACTATTGCGATTTTCAACGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS TCA 72 bp | CCAAAGACAGCGAAGAGAGTGATGGAACCGATGTTCTaGAAGAAGTTCCCCTTGTGCAGTGAGTATCCTGAC | + |
Preference number: 6 (lower is better) Translates to: PKTAKRVMEPMF*KKFPLCSEYPD Trigger: GTCAGGATACTCACTGCACAAGGGGAACTTCTTTCAGAACATCGGTTCCATCACTCTCTTCGCTGTCTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS TCA 72 bp | AAGCCGAGATTGCCGTTCCAAAGACAGCGAAGAGAGTaGTGGAACCGATGTTCTGAAAGAAGTTCCCCTTGT | + |
Preference number: 6 (lower is better) Translates to: KPRLPFQRQRRE*WNRCSERSSPC Trigger: ACAAGGGGAACTTCTTTCAGAACATCGGTTCCATCACTCTCTTCGCTGTCTTTGGAACGGCAATCTCGGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS TCA 72 bp | TTCCTTCTGCCAGCCCATATGGCAGGTAAGCAAAAATaGTCATCATGCCAAACTCCAGGGAAGGCGTTTTCC | + |
Preference number: 6 (lower is better) Translates to: FLLPAHMAGKQK*SSCQTPGKAFS Trigger: GGAAAACGCCTTCCCTGGAGTTTGGCATGATGATCATTTTTGCTTACCTGCCATATGGGCTGGCAGAAGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |
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CDS GCA 72 bp | CCAAACTCCAGGGAAGGCGTTTTCCTCAGGTCAATGTaGTTCAACACTAATGCTGAAATCAAGCCAGTCAGC | + |
Preference number: 6 (lower is better) Translates to: PNSREGVFLRSM*FNTNAEIKPVS Trigger: GCTGACTGGCTTGATTTCAGCATTAGTGTTGAAGCACATTGACCTGAGGAAAACGCCTTCCCTGGAGTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 |
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CDS TCA 72 bp | AGTAGCCAAGGGCCTGTGAGAACGTTTGCCACCCACTaGCATCTGACATATGTTTTCTTGTTAGACCTTCAG | + |
Preference number: 6 (lower is better) Translates to: SSQGPVRTFATH*HLTYVFLLDLQ Trigger: CTGAAGGTCTAACAAGAAAACATATGTCAGATGTCAGTGGGTGGCAAACGTTCTCACAGGCCCTTGGCTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047815.13 ENSMUST00000073873.5 ENSMUST00000109218.7 |