Pregenerated sensors for SLC9A7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037341Ensembl transcript IDs: ENSMUST00000072451.11, ENSMUST00000115393.3, ENSMUST00000224372.2
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTAGGCACACAGCATGTAATCATATTAACTGTGTTGTGTTTTCACTaGCGGGGCATATTTGGGTTGGAGATTTACCACAACATACAGCCA | + |
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Preference number: 1 (lower is better) Translates to: LGTQHVIILTVLCFH*RGIFGLEIYHNIQP Trigger: TGGCTGTATGTTGTGGTAAATCTCCAACCCAAATATGCCCCGGCAGTGAAAACACAACACAGTTAATATGATTACATGCTGTGTGCCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115393.3 |
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| 3UTR CAA 90 bp | GATCTGTCCAATCTAGGCACACAGCATGTAATCATATTAACTGTGTaGTGTTTTCACTGCCGGGGCATATTTGGGTTGGAGATTTACCAC | + |
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Preference number: 2 (lower is better) Translates to: DLSNLGTQHVIILTV*CFHCRGIFGLEIYH Trigger: GTGGTAAATCTCCAACCCAAATATGCCCCGGCAGTGAAAACACAACACAGTTAATATGATTACATGCTGTGTGCCTAGATTGGACAGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115393.3 |
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| 3UTR-3UTR GCA 90 bp | TTTATTCAATTTTTCAGGCAAGTTCTCTGTATACATCTTAGGCTAGCCTTGACTGTGTTGTGTTTTCACTaGCGGGGCATATTTGGGTTG | + |
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Preference number: 2 (lower is better) Translates to: FIQFFRQVLCIHLRLALTVLCFH*RGIFGL Trigger: CAACCCAAATATGCCCCGGCAGTGAAAACACAACAC...AGTCAAGGCTAGCCTAAGATGTATACAGAGAACTTGCCTGAAAAATTGAATAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115393.3 |
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| 3UTR CAA 90 bp | ATTCAATTTTTCAGGCAAGTTCTCTGTATACATCTTAGGCTAGCCTaGACTTCCTGCTTCAGCCTTCTAATTGTTGGAATTATAAGCATG | + |
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Preference number: 2 (lower is better) Translates to: IQFFRQVLCIHLRLA*TSCFSLLIVGIISM Trigger: CATGCTTATAATTCCAACAATTAGAAGGCTGAAGCAGGAAGTCAAGGCTAGCCTAAGATGTATACAGAGAACTTGCCTGAAAAATTGAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115393.3 |
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| 3UTR GCA 72 bp | CAGCATGTAATCATATTAACTGTGTTGTGTTTTCACTaGCGGGGCATATTTGGGTTGGAGATTTACCACAAC | + |
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Preference number: 3 (lower is better) Translates to: QHVIILTVLCFH*RGIFGLEIYHN Trigger: GTTGTGGTAAATCTCCAACCCAAATATGCCCCGGCAGTGAAAACACAACACAGTTAATATGATTACATGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115393.3 |
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| CDS-3UTR CCA 90 bp | ACACTTGGGCATTTGGCCATCCTCACCCTTATAAGAGCCTCCCTGATCCCTCAGAGCGGGGGACCACTGTaGGTGAGAATGGGCTTCAAG | + |
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Preference number: 4 (lower is better) Translates to: TLGHLAILTLIRASLIPQSGGPL*VRMGFK Trigger: CTTGAAGCCCATTCTCACCCACAGTGGTCCCCCGCT...CTGAGGGATCAGGGAGGCTCTTATAAGGGTGAGGATGGCCAAATGCCCAAGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072451.11 ENSMUST00000224372.2 |
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| CDS-3UTR TCA 90 bp | ACACTTGGGCATTTGGCCATCCTCACCCTTATAAGAGCCTCCCTGATCCCTCAGCCCCATAGGTCAAGGTaGGGTCACCTTCCGTTAGGA | + |
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Preference number: 4 (lower is better) Translates to: TLGHLAILTLIRASLIPQPHRSR*GHLPLG Trigger: TCCTAACGGAAGGTGACCTCACCTTGACCTATGGGG...CTGAGGGATCAGGGAGGCTCTTATAAGGGTGAGGATGGCCAAATGCCCAAGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072451.11 ENSMUST00000224372.2 |
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| CDS-3UTR GCA 90 bp | TTTGGCCATCCTCACCCTTATAAGAGCCTCCCTGATCCCTCAGGATTTACAGGTCTGGCGGGCATACGATaGCGTGTCACGGATAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: FGHPHPYKSLPDPSGFTGLAGIR*RVTDSQ Trigger: CTGGCTATCCGTGACACGGCATCGTATGCCCGCCAG...ACCTGTAAATCCTGAGGGATCAGGGAGGCTCTTATAAGGGTGAGGATGGCCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072451.11 ENSMUST00000224372.2 |
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| CDS-3UTR TCA 90 bp | TTTGGCCATCCTCACCCTTATAAGAGCCTCCCTGATCCCTCAGGATTTACAGGTCTGAGTGACTTGTCATaGCCGCTGGTAGCAGGGGTG | + |
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Preference number: 4 (lower is better) Translates to: FGHPHPYKSLPDPSGFTGLSDLS*PLVAGV Trigger: CACCCCTGCTACCAGCGGTCATGACAAGTCACTCAG...ACCTGTAAATCCTGAGGGATCAGGGAGGCTCTTATAAGGGTGAGGATGGCCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072451.11 |
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| CDS-3UTR CCA 90 bp | ACACTTGGGCATTTGGCCATCCTCACCCTTATAAGAGCCTCCCTGATCCCTCAGGTTGTGAACATCATCTaGCGGGCATACGATGCCGTG | + |
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Preference number: 4 (lower is better) Translates to: TLGHLAILTLIRASLIPQVVNII*RAYDAV Trigger: CACGGCATCGTATGCCCGCCAGATGATGTTCACAAC...CTGAGGGATCAGGGAGGCTCTTATAAGGGTGAGGATGGCCAAATGCCCAAGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072451.11 ENSMUST00000224372.2 |
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| CDS-3UTR TCA 90 bp | GGGCATTTGGCCATCCTCACCCTTATAAGAGCCTCCCTGATCCCTCAGGATTTAGGGGACCACTGTGGGTaGGAATGGGCTTCAAGTAAT | + |
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Preference number: 4 (lower is better) Translates to: GHLAILTLIRASLIPQDLGDHCG*EWASSN Trigger: ATTACTTGAAGCCCATTCTCACCCACAGTGGTCCCC...TAAATCCTGAGGGATCAGGGAGGCTCTTATAAGGGTGAGGATGGCCAAATGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072451.11 ENSMUST00000224372.2 |
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| CDS-3UTR GCA 90 bp | TTTGGCCATCCTCACCCTTATAAGAGCCTCCCTGATCCCTCAGGATTTACAGGTAAACGCACCCGGCGGTaGTTGAAAAGCCAGATGGTG | + |
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Preference number: 4 (lower is better) Translates to: FGHPHPYKSLPDPSGFTGKRTRR*LKSQMV Trigger: CACCATCTGGCTTTTCAAGCACCGCCGGGTGCGTTT...ACCTGTAAATCCTGAGGGATCAGGGAGGCTCTTATAAGGGTGAGGATGGCCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072451.11 |
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| CDS-3UTR CCA 90 bp | GGGCATTTGGCCATCCTCACCCTTATAAGAGCCTCCCTGATCCCTCAGGATTTAGTTGTGAACATCATCTaGCGGGCATACGATGCCGTG | + |
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Preference number: 4 (lower is better) Translates to: GHLAILTLIRASLIPQDLVVNII*RAYDAV Trigger: CACGGCATCGTATGCCCGCCAGATGATGTTCACAAC...TAAATCCTGAGGGATCAGGGAGGCTCTTATAAGGGTGAGGATGGCCAAATGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072451.11 ENSMUST00000224372.2 |
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| CDS-3UTR CCA 90 bp | ACACTTGGGCATTTGGCCATCCTCACCCTTATAAGAGCCTCCCTGATCCCTCAGGAGGAAGAAGGAGAGTaGGTAGATATGTGCAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: TLGHLAILTLIRASLIPQEEEGE*VDMCSS Trigger: AGAGCTGCACATATCTACCCACTCTCCTTCTTCCTC...CTGAGGGATCAGGGAGGCTCTTATAAGGGTGAGGATGGCCAAATGCCCAAGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072451.11 ENSMUST00000224372.2 |
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| CDS-3UTR CCA 90 bp | GGGCATTTGGCCATCCTCACCCTTATAAGAGCCTCCCTGATCCCTCAGGATTTACATACACCTGAGGACTaGTCAGACATCGAGCTAGCA | + |
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Preference number: 4 (lower is better) Translates to: GHLAILTLIRASLIPQDLHTPED*SDIELA Trigger: TGCTAGCTCGATGTCTGACCAGTCCTCAGGTGTATG...TAAATCCTGAGGGATCAGGGAGGCTCTTATAAGGGTGAGGATGGCCAAATGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072451.11 ENSMUST00000224372.2 |
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| CDS-3UTR CCA 90 bp | ACACTTGGGCATTTGGCCATCCTCACCCTTATAAGAGCCTCCCTGATCCCTCAGTGGTGGGTCTTGATCTaGGTCAACACCGACTCTTAT | + |
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Preference number: 4 (lower is better) Translates to: TLGHLAILTLIRASLIPQWWVLI*VNTDSY Trigger: ATAAGAGTCGGTGTTGACCCAGATCAAGACCCACCA...CTGAGGGATCAGGGAGGCTCTTATAAGGGTGAGGATGGCCAAATGCCCAAGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224372.2 |
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| CDS-3UTR TCA 90 bp | GGTCTCATAGATGTGGAAGATGGTAGTGTAGCGGTAGATCTGTCCAATCTAGGCCTTCCTGAGTACAGCTaGGTGACTTGTCATGACCGC | + |
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Preference number: 4 (lower is better) Translates to: GLIDVEDGSVAVDLSNLGLPEYS*VTCHDR Trigger: GCGGTCATGACAAGTCACTCAGCTGTACTCAGGAAG...GCCTAGATTGGACAGATCTACCGCTACACTACCATCTTCCACATCTATGAGACC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115393.3 |
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| CDS-3UTR TCA 90 bp | TTTGGCCATCCTCACCCTTATAAGAGCCTCCCTGATCCCTCAGGATTTACAGGTGCAGCATCAAACGCATaGGTGTTTAGTCCTGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: FGHPHPYKSLPDPSGFTGAASNA*VFSPAG Trigger: ACCAGCAGGACTAAACACTCATGCGTTTGATGCTGC...ACCTGTAAATCCTGAGGGATCAGGGAGGCTCTTATAAGGGTGAGGATGGCCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072451.11 |
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| CDS-3UTR GCA 90 bp | GGGCATTTGGCCATCCTCACCCTTATAAGAGCCTCCCTGATCCCTCAGGATTTAGAGTGGGTAGATATGTaGAGCTCTTCCCAGGAAGAT | + |
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Preference number: 4 (lower is better) Translates to: GHLAILTLIRASLIPQDLEWVDM*SSSQED Trigger: ATCTTCCTGGGAAGAGCTGCACATATCTACCCACTC...TAAATCCTGAGGGATCAGGGAGGCTCTTATAAGGGTGAGGATGGCCAAATGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072451.11 ENSMUST00000224372.2 |
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| CDS-3UTR GCA 90 bp | CAATTTTTCAGGCAAGTTCTCTGTATACATCTTAGGCTAGCCTTGACTTCCTGCCTGGCGGGCATACGATaGCGTGTCACGGATAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: QFFRQVLCIHLRLALTSCLAGIR*RVTDSQ Trigger: CTGGCTATCCGTGACACGGCATCGTATGCCCGCCAG...GCAGGAAGTCAAGGCTAGCCTAAGATGTATACAGAGAACTTGCCTGAAAAATTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115393.3 |
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| CDS-3UTR CCA 90 bp | TTTGGCCATCCTCACCCTTATAAGAGCCTCCCTGATCCCTCAGGATTTACAGGTCATACACCTGAGGACTaGTCAGACATCGAGCTAGCA | + |
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Preference number: 4 (lower is better) Translates to: FGHPHPYKSLPDPSGFTGHTPED*SDIELA Trigger: TGCTAGCTCGATGTCTGACCAGTCCTCAGGTGTATG...ACCTGTAAATCCTGAGGGATCAGGGAGGCTCTTATAAGGGTGAGGATGGCCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072451.11 ENSMUST00000224372.2 |
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| CDS-3UTR GCA 90 bp | TCTAGGCACACAGCATGTAATCATATTAACTGTGTTGTGTTTTCACTGCCGGGGAAACGCACCCGGCGGTaGTTGAAAAGCCAGATGGTG | + |
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Preference number: 4 (lower is better) Translates to: SRHTACNHINCVVFSLPGKRTRR*LKSQMV Trigger: CACCATCTGGCTTTTCAAGCACCGCCGGGTGCGTTT...CCCCGGCAGTGAAAACACAACACAGTTAATATGATTACATGCTGTGTGCCTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115393.3 |
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| CDS-3UTR GCA 90 bp | ATAGATGTGGAAGATGGTAGTGTAGCGGTAGATCTGTCCAATCTAGGCACACAGGTCACGGATAGCCAGTaGAAATGCCATCGCTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: IDVEDGSVAVDLSNLGTQVTDSQ*KCHRSS Trigger: AGAGGAGCGATGGCATTTGCACTGGCTATCCGTGAC...CTGTGTGCCTAGATTGGACAGATCTACCGCTACACTACCATCTTCCACATCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115393.3 |
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| CDS-3UTR GCA 90 bp | GGGCATTTGGCCATCCTCACCCTTATAAGAGCCTCCCTGATCCCTCAGGATTTACTCCAACAGAATCCATaGCATCCCCTTGTAAGACTT | + |
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Preference number: 4 (lower is better) Translates to: GHLAILTLIRASLIPQDLLQQNP*HPLVRL Trigger: AAGTCTTACAAGGGGATGGCATGGATTCTGTTGGAG...TAAATCCTGAGGGATCAGGGAGGCTCTTATAAGGGTGAGGATGGCCAAATGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072451.11 ENSMUST00000224372.2 |
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| CDS-3UTR CCA 90 bp | ACACTTGGGCATTTGGCCATCCTCACCCTTATAAGAGCCTCCCTGATCCCTCAGACGAGGATAGTACAATaGCAACTGCATCATTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: TLGHLAILTLIRASLIPQTRIVQ*QLHHSG Trigger: TCCTGAATGATGCAGTTGCCATTGTACTATCCTCGT...CTGAGGGATCAGGGAGGCTCTTATAAGGGTGAGGATGGCCAAATGCCCAAGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072451.11 |
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| CDS-3UTR TCA 90 bp | TGTAATCATATTAACTGTGTTGTGTTTTCACTGCCGGGGCATATTTGGGTTGGACTGAGTGACTTGTCATaGCCGCTGGTAGCAGGGGTG | + |
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Preference number: 4 (lower is better) Translates to: CNHINCVVFSLPGHIWVGLSDLS*PLVAGV Trigger: CACCCCTGCTACCAGCGGTCATGACAAGTCACTCAG...TCCAACCCAAATATGCCCCGGCAGTGAAAACACAACACAGTTAATATGATTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115393.3 |
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| CDS-3UTR TCA 90 bp | ACACTTGGGCATTTGGCCATCCTCACCCTTATAAGAGCCTCCCTGATCCCTCAGCAAAGAACTTCCCACTaGCATTCACTAATAAAGTGC | + |
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Preference number: 4 (lower is better) Translates to: TLGHLAILTLIRASLIPQQRTSH*HSLIKC Trigger: GCACTTTATTAGTGAATGTCAGTGGGAAGTTCTTTG...CTGAGGGATCAGGGAGGCTCTTATAAGGGTGAGGATGGCCAAATGCCCAAGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072451.11 |
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| CDS-3UTR TCA 90 bp | TTTGGCCATCCTCACCCTTATAAGAGCCTCCCTGATCCCTCAGGATTTACAGGTAGATGTACCACAGCCTaGATATCCATGCACTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: FGHPHPYKSLPDPSGFTGRCTTA*ISMHFP Trigger: AGGAAAGTGCATGGATATTCAGGCTGTGGTACATCT...ACCTGTAAATCCTGAGGGATCAGGGAGGCTCTTATAAGGGTGAGGATGGCCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072451.11 ENSMUST00000224372.2 |
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| CDS-3UTR TCA 90 bp | AGTGGTAAGATAGTTTCAGGCCCCACTGAAACAGAAGCAATAGTCTTAACATGGCCCCATAGGTCAAGGTaGGGTCACCTTCCGTTAGGA | + |
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Preference number: 4 (lower is better) Translates to: SGKIVSGPTETEAIVLTWPHRSR*GHLPLG Trigger: TCCTAACGGAAGGTGACCTCACCTTGACCTATGGGG...CCATGTTAAGACTATTGCTTCTGTTTCAGTGGGGCCTGAAACTATCTTACCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072451.11 ENSMUST00000224372.2 |
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| CDS-3UTR GCA 90 bp | AAGATAGTTTCAGGCCCCACTGAAACAGAAGCAATAGTCTTAACATGGTCAATACTGGCGGGCATACGATaGCGTGTCACGGATAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: KIVSGPTETEAIVLTWSILAGIR*RVTDSQ Trigger: CTGGCTATCCGTGACACGGCATCGTATGCCCGCCAG...TATTGACCATGTTAAGACTATTGCTTCTGTTTCAGTGGGGCCTGAAACTATCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072451.11 ENSMUST00000224372.2 |
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| CDS-3UTR CCA 90 bp | ACACTTGGGCATTTGGCCATCCTCACCCTTATAAGAGCCTCCCTGATCCCTCAGGTCATCTTCTCTCAGTaGCTCTTGATTATCATACAC | + |
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Preference number: 4 (lower is better) Translates to: TLGHLAILTLIRASLIPQVIFSQ*LLIIIH Trigger: GTGTATGATAATCAAGAGCCACTGAGAGAAGATGAC...CTGAGGGATCAGGGAGGCTCTTATAAGGGTGAGGATGGCCAAATGCCCAAGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072451.11 ENSMUST00000224372.2 |
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| CDS-3UTR TCA 90 bp | AGTGGTAAGATAGTTTCAGGCCCCACTGAAACAGAAGCAATAGTCTTAACATGGCTTCCTGAGTACAGCTaGGTGACTTGTCATGACCGC | + |
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Preference number: 4 (lower is better) Translates to: SGKIVSGPTETEAIVLTWLPEYS*VTCHDR Trigger: GCGGTCATGACAAGTCACTCAGCTGTACTCAGGAAG...CCATGTTAAGACTATTGCTTCTGTTTCAGTGGGGCCTGAAACTATCTTACCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072451.11 |
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| CDS-3UTR TCA 90 bp | CTCATAGATGTGGAAGATGGTAGTGTAGCGGTAGATCTGTCCAATCTAGGCACAGGCCCACAATCTTCATaGGTTTCACCACTCCATACA | + |
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Preference number: 4 (lower is better) Translates to: LIDVEDGSVAVDLSNLGTGPQSS*VSPLHT Trigger: TGTATGGAGTGGTGAAACTCATGAAGATTGTGGGCC...TGTGCCTAGATTGGACAGATCTACCGCTACACTACCATCTTCCACATCTATGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115393.3 |
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| CDS-3UTR TCA 90 bp | TCAGGCCCCACTGAAACAGAAGCAATAGTCTTAACATGGTCAATACAACACATCGGGGACCACTGTGGGTaGGAATGGGCTTCAAGTAAT | + |
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Preference number: 4 (lower is better) Translates to: SGPTETEAIVLTWSIQHIGDHCG*EWASSN Trigger: ATTACTTGAAGCCCATTCTCACCCACAGTGGTCCCC...GATGTGTTGTATTGACCATGTTAAGACTATTGCTTCTGTTTCAGTGGGGCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072451.11 ENSMUST00000224372.2 |
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| CDS-3UTR GCA 90 bp | AGTGGTAAGATAGTTTCAGGCCCCACTGAAACAGAAGCAATAGTCTTAACATGGGTCACGGATAGCCAGTaGAAATGCCATCGCTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: SGKIVSGPTETEAIVLTWVTDSQ*KCHRSS Trigger: AGAGGAGCGATGGCATTTGCACTGGCTATCCGTGAC...CCATGTTAAGACTATTGCTTCTGTTTCAGTGGGGCCTGAAACTATCTTACCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072451.11 ENSMUST00000224372.2 |
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| CDS-3UTR GCA 90 bp | TCAGGCCCCACTGAAACAGAAGCAATAGTCTTAACATGGTCAATACAACACATCGTCACGGATAGCCAGTaGAAATGCCATCGCTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: SGPTETEAIVLTWSIQHIVTDSQ*KCHRSS Trigger: AGAGGAGCGATGGCATTTGCACTGGCTATCCGTGAC...GATGTGTTGTATTGACCATGTTAAGACTATTGCTTCTGTTTCAGTGGGGCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072451.11 ENSMUST00000224372.2 |
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| CDS-3UTR CCA 90 bp | CAATTTTTCAGGCAAGTTCTCTGTATACATCTTAGGCTAGCCTTGACTTCCTGCGTTGTGAACATCATCTaGCGGGCATACGATGCCGTG | + |
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Preference number: 4 (lower is better) Translates to: QFFRQVLCIHLRLALTSCVVNII*RAYDAV Trigger: CACGGCATCGTATGCCCGCCAGATGATGTTCACAAC...GCAGGAAGTCAAGGCTAGCCTAAGATGTATACAGAGAACTTGCCTGAAAAATTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115393.3 |
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| CDS-3UTR CCA 90 bp | GGGCATTTGGCCATCCTCACCCTTATAAGAGCCTCCCTGATCCCTCAGGATTTAGTCATCTTCTCTCAGTaGCTCTTGATTATCATACAC | + |
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Preference number: 4 (lower is better) Translates to: GHLAILTLIRASLIPQDLVIFSQ*LLIIIH Trigger: GTGTATGATAATCAAGAGCCACTGAGAGAAGATGAC...TAAATCCTGAGGGATCAGGGAGGCTCTTATAAGGGTGAGGATGGCCAAATGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072451.11 ENSMUST00000224372.2 |
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| CDS-3UTR TCA 90 bp | CAGCATGTAATCATATTAACTGTGTTGTGTTTTCACTGCCGGGGCATATTTGGGGCAGCATCAAACGCATaGGTGTTTAGTCCTGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: QHVIILTVLCFHCRGIFGAASNA*VFSPAG Trigger: ACCAGCAGGACTAAACACTCATGCGTTTGATGCTGC...CCCAAATATGCCCCGGCAGTGAAAACACAACACAGTTAATATGATTACATGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115393.3 |
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| CDS-3UTR GCA 90 bp | AGTGGTAAGATAGTTTCAGGCCCCACTGAAACAGAAGCAATAGTCTTAACATGGATCCATGCACTTTCCTaGTTTGTCCGGCTTCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: SGKIVSGPTETEAIVLTWIHALS*FVRLPP Trigger: TGGAGGAAGCCGGACAAAGCAGGAAAGTGCATGGAT...CCATGTTAAGACTATTGCTTCTGTTTCAGTGGGGCCTGAAACTATCTTACCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072451.11 ENSMUST00000224372.2 |
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| CDS-3UTR GCA 90 bp | TCAGGCCCCACTGAAACAGAAGCAATAGTCTTAACATGGTCAATACAACACATCCATTTGCTGTCACGGTaGTATCCCCATAGGTCAAGG | + |
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Preference number: 4 (lower is better) Translates to: SGPTETEAIVLTWSIQHIHLLSR*YPHRSR Trigger: CCTTGACCTATGGGGATAGCACCGTGACAGCAAATG...GATGTGTTGTATTGACCATGTTAAGACTATTGCTTCTGTTTCAGTGGGGCCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072451.11 ENSMUST00000224372.2 |
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| CDS-3UTR CCA 90 bp | TCTAGGCACACAGCATGTAATCATATTAACTGTGTTGTGTTTTCACTGCCGGGGTGCCAGCACAGTCACTaGGTCAGTGGCAGAAATAAT | + |
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Preference number: 4 (lower is better) Translates to: SRHTACNHINCVVFSLPGCQHSH*VSGRNN Trigger: ATTATTTCTGCCACTGACCCAGTGACTGTGCTGGCA...CCCCGGCAGTGAAAACACAACACAGTTAATATGATTACATGCTGTGTGCCTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115393.3 |
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| CDS-3UTR CCA 90 bp | TCTAGGCACACAGCATGTAATCATATTAACTGTGTTGTGTTTTCACTGCCGGGGGAGGAAGAAGGAGAGTaGGTAGATATGTGCAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: SRHTACNHINCVVFSLPGEEEGE*VDMCSS Trigger: AGAGCTGCACATATCTACCCACTCTCCTTCTTCCTC...CCCCGGCAGTGAAAACACAACACAGTTAATATGATTACATGCTGTGTGCCTAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115393.3 |
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| CDS-3UTR CCA 90 bp | AGTGGTAAGATAGTTTCAGGCCCCACTGAAACAGAAGCAATAGTCTTAACATGGCATCGGTTCTCATTCTaGTCCTCTTCAGAGAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: SGKIVSGPTETEAIVLTWHRFSF*SSSESS Trigger: GGAGCTCTCTGAAGAGGACCAGAATGAGAACCGATG...CCATGTTAAGACTATTGCTTCTGTTTCAGTGGGGCCTGAAACTATCTTACCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072451.11 |
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| CDS-3UTR CCA 90 bp | AGTGGTAAGATAGTTTCAGGCCCCACTGAAACAGAAGCAATAGTCTTAACATGGTGGTGGGTCTTGATCTaGGTCAACACCGACTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: SGKIVSGPTETEAIVLTWWWVLI*VNTDSE Trigger: TTCAGAGTCGGTGTTGACCCAGATCAAGACCCACCA...CCATGTTAAGACTATTGCTTCTGTTTCAGTGGGGCCTGAAACTATCTTACCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072451.11 |
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| CDS-3UTR TCA 90 bp | AGTGGTAAGATAGTTTCAGGCCCCACTGAAACAGAAGCAATAGTCTTAACATGGGGCCCACAATCTTCATaGGTTTCACCACTCCATACA | + |
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Preference number: 4 (lower is better) Translates to: SGKIVSGPTETEAIVLTWGPQSS*VSPLHT Trigger: TGTATGGAGTGGTGAAACTCATGAAGATTGTGGGCC...CCATGTTAAGACTATTGCTTCTGTTTCAGTGGGGCCTGAAACTATCTTACCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072451.11 |
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| CDS-3UTR TCA 90 bp | TCTAGGCACACAGCATGTAATCATATTAACTGTGTTGTGTTTTCACTGCCGGGGGAGGCAGCAGAATGTTaGAAAATACCTCTGGATCAA | + |
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Preference number: 4 (lower is better) Translates to: SRHTACNHINCVVFSLPGEAAEC*KIPLDQ Trigger: TTGATCCAGAGGTATTTTTCAACATTCTGCTGCCTC...CCCCGGCAGTGAAAACACAACACAGTTAATATGATTACATGCTGTGTGCCTAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115393.3 |
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| CDS-3UTR TCA 90 bp | AGTGGTAAGATAGTTTCAGGCCCCACTGAAACAGAAGCAATAGTCTTAACATGGAGATGTACCACAGCCTaGATATCCATGCACTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: SGKIVSGPTETEAIVLTWRCTTA*ISMHFP Trigger: AGGAAAGTGCATGGATATTCAGGCTGTGGTACATCT...CCATGTTAAGACTATTGCTTCTGTTTCAGTGGGGCCTGAAACTATCTTACCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072451.11 ENSMUST00000224372.2 |
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| CDS-3UTR GCA 90 bp | GGCACACAGCATGTAATCATATTAACTGTGTTGTGTTTTCACTGCCGGGGCATAAACACCTCAAAAAGCTaGTTGCTTCGACTTCGAGAT | + |
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Preference number: 4 (lower is better) Translates to: GTQHVIILTVLCFHCRGINTSKS*LLRLRD Trigger: ATCTCGAAGTCGAAGCAAGCAGCTTTTTGAGGTGTT...TATGCCCCGGCAGTGAAAACACAACACAGTTAATATGATTACATGCTGTGTGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115393.3 |
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| CDS-3UTR GCA 90 bp | AAGATAGTTTCAGGCCCCACTGAAACAGAAGCAATAGTCTTAACATGGTCAATACATTTGCTGTCACGGTaGTATCCCCATAGGTCAAGG | + |
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Preference number: 4 (lower is better) Translates to: KIVSGPTETEAIVLTWSIHLLSR*YPHRSR Trigger: CCTTGACCTATGGGGATAGCACCGTGACAGCAAATG...TATTGACCATGTTAAGACTATTGCTTCTGTTTCAGTGGGGCCTGAAACTATCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072451.11 ENSMUST00000224372.2 |
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| 3UTR CAA 72 bp | AATCTAGGCACACAGCATGTAATCATATTAACTGTGTaGTGTTTTCACTGCCGGGGCATATTTGGGTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: NLGTQHVIILTV*CFHCRGIFGLE Trigger: CTCCAACCCAAATATGCCCCGGCAGTGAAAACACAACACAGTTAATATGATTACATGCTGTGTGCCTAGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115393.3 |
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| CDS-3UTR GCA 90 bp | TCAGGCCCCACTGAAACAGAAGCAATAGTCTTAACATGGTCAATACAACACATCAACACCTCAAAAAGCTaGTTGCTTCGACTTCGAGAT | + |
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Preference number: 4 (lower is better) Translates to: SGPTETEAIVLTWSIQHINTSKS*LLRLRD Trigger: ATCTCGAAGTCGAAGCAAGCAGCTTTTTGAGGTGTT...GATGTGTTGTATTGACCATGTTAAGACTATTGCTTCTGTTTCAGTGGGGCCTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072451.11 ENSMUST00000224372.2 |
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| CDS-3UTR GCA 90 bp | AAGATAGTTTCAGGCCCCACTGAAACAGAAGCAATAGTCTTAACATGGTCAATAGAGTGGGTAGATATGTaGAGCTCTTCCCAGGAAGAT | + |
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Preference number: 4 (lower is better) Translates to: KIVSGPTETEAIVLTWSIEWVDM*SSSQED Trigger: ATCTTCCTGGGAAGAGCTGCACATATCTACCCACTC...TATTGACCATGTTAAGACTATTGCTTCTGTTTCAGTGGGGCCTGAAACTATCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072451.11 ENSMUST00000224372.2 |
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| CDS-3UTR CCA 90 bp | AAGATAGTTTCAGGCCCCACTGAAACAGAAGCAATAGTCTTAACATGGTCAATATGCCAGCACAGTCACTaGGTCAGTGGCAGAAATAAT | + |
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Preference number: 4 (lower is better) Translates to: KIVSGPTETEAIVLTWSICQHSH*VSGRNN Trigger: ATTATTTCTGCCACTGACCCAGTGACTGTGCTGGCA...TATTGACCATGTTAAGACTATTGCTTCTGTTTCAGTGGGGCCTGAAACTATCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072451.11 |
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| CDS-3UTR CCA 90 bp | TCAGGCCCCACTGAAACAGAAGCAATAGTCTTAACATGGTCAATACAACACATCAATTTATCAGAGAGCTaGCCCACAATCTTCATGAGT | + |
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Preference number: 4 (lower is better) Translates to: SGPTETEAIVLTWSIQHINLSES*PTIFMS Trigger: ACTCATGAAGATTGTGGGCCAGCTCTCTGATAAATT...GATGTGTTGTATTGACCATGTTAAGACTATTGCTTCTGTTTCAGTGGGGCCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072451.11 |
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| CDS-3UTR CCA 90 bp | CAATTTTTCAGGCAAGTTCTCTGTATACATCTTAGGCTAGCCTTGACTTCCTGCAATTTATCAGAGAGCTaGCCCACAATCTTCATGAGT | + |
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Preference number: 4 (lower is better) Translates to: QFFRQVLCIHLRLALTSCNLSES*PTIFMS Trigger: ACTCATGAAGATTGTGGGCCAGCTCTCTGATAAATT...GCAGGAAGTCAAGGCTAGCCTAAGATGTATACAGAGAACTTGCCTGAAAAATTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115393.3 |
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| CDS-3UTR TCA 90 bp | AAGATAGTTTCAGGCCCCACTGAAACAGAAGCAATAGTCTTAACATGGTCAATAGAGGCAGCAGAATGTTaGAAAATACCTCTGGATCAA | + |
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Preference number: 4 (lower is better) Translates to: KIVSGPTETEAIVLTWSIEAAEC*KIPLDQ Trigger: TTGATCCAGAGGTATTTTTCAACATTCTGCTGCCTC...TATTGACCATGTTAAGACTATTGCTTCTGTTTCAGTGGGGCCTGAAACTATCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072451.11 |
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| CDS-3UTR GCA 90 bp | AAGATAGTTTCAGGCCCCACTGAAACAGAAGCAATAGTCTTAACATGGTCAATAAACACCTCAAAAAGCTaGTTGCTTCGACTTCGAGAT | + |
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Preference number: 4 (lower is better) Translates to: KIVSGPTETEAIVLTWSINTSKS*LLRLRD Trigger: ATCTCGAAGTCGAAGCAAGCAGCTTTTTGAGGTGTT...TATTGACCATGTTAAGACTATTGCTTCTGTTTCAGTGGGGCCTGAAACTATCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072451.11 ENSMUST00000224372.2 |
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| CDS-3UTR GCA 90 bp | TTTATTCAATTTTTCAGGCAAGTTCTCTGTATACATCTTAGGCTAGCCTTGACTGAGTGGGTAGATATGTaGAGCTCTTCCCAGGAAGAT | + |
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Preference number: 4 (lower is better) Translates to: FIQFFRQVLCIHLRLALTEWVDM*SSSQED Trigger: ATCTTCCTGGGAAGAGCTGCACATATCTACCCACTC...AGTCAAGGCTAGCCTAAGATGTATACAGAGAACTTGCCTGAAAAATTGAATAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115393.3 |
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| CDS CCA 90 bp | CTTCCTCAGAGCTGCTTTTTGTTCTCCGACCACACTCGAGACTTGTaGAGGCTGTGTAGGAGCTTGAGGAGCCATTTGCTGTCACGGTGC | + |
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Preference number: 5 (lower is better) Translates to: LPQSCFLFSDHTRDL*RLCRSLRSHLLSRC Trigger: GCACCGTGACAGCAAATGGCTCCTCAAGCTCCTACACAGCCTCCACAAGTCTCGAGTGTGGTCGGAGAACAAAAAGCAGCTCTGAGGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072451.11 ENSMUST00000224372.2 |
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| CDS-3UTR CAA 90 bp | ACACTTGGGCATTTGGCCATCCTCACCCTTATAAGAGCCTCCCTGATCCCTCAGAGCTTGAGGAGCCATTaGCTGTCACGGTGCTATCCC | + |
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Preference number: 5 (lower is better) Translates to: TLGHLAILTLIRASLIPQSLRSH*LSRCYP Trigger: GGGATAGCACCGTGACAGCAAATGGCTCCTCAAGCT...CTGAGGGATCAGGGAGGCTCTTATAAGGGTGAGGATGGCCAAATGCCCAAGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072451.11 ENSMUST00000224372.2 |
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| CDS-3UTR CAA 90 bp | ACACTTGGGCATTTGGCCATCCTCACCCTTATAAGAGCCTCCCTGATCCCTCAGAGGCTGTGTAGGAGCTaGAGGAGCCATTTGCTGTCA | + |
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Preference number: 5 (lower is better) Translates to: TLGHLAILTLIRASLIPQRLCRS*RSHLLS Trigger: TGACAGCAAATGGCTCCTCAAGCTCCTACACAGCCT...CTGAGGGATCAGGGAGGCTCTTATAAGGGTGAGGATGGCCAAATGCCCAAGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072451.11 ENSMUST00000224372.2 |
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| CDS-3UTR CAA 90 bp | TTTGGCCATCCTCACCCTTATAAGAGCCTCCCTGATCCCTCAGGATTTACAGGTAGGCTGTGTAGGAGCTaGAGGAGCCATTTGCTGTCA | + |
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Preference number: 5 (lower is better) Translates to: FGHPHPYKSLPDPSGFTGRLCRS*RSHLLS Trigger: TGACAGCAAATGGCTCCTCAAGCTCCTACACAGCCT...ACCTGTAAATCCTGAGGGATCAGGGAGGCTCTTATAAGGGTGAGGATGGCCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072451.11 ENSMUST00000224372.2 |
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| CDS-3UTR CAA 90 bp | ACACTTGGGCATTTGGCCATCCTCACCCTTATAAGAGCCTCCCTGATCCCTCAGTTCTCTCAGTGGCTCTaGATTATCATACACCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: TLGHLAILTLIRASLIPQFSQWL*IIIHLR Trigger: CCTCAGGTGTATGATAATCAAGAGCCACTGAGAGAA...CTGAGGGATCAGGGAGGCTCTTATAAGGGTGAGGATGGCCAAATGCCCAAGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072451.11 ENSMUST00000224372.2 |
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| CDS-3UTR CAA 90 bp | TTTGGCCATCCTCACCCTTATAAGAGCCTCCCTGATCCCTCAGGATTTACAGGTTTCTCTCAGTGGCTCTaGATTATCATACACCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: FGHPHPYKSLPDPSGFTGFSQWL*IIIHLR Trigger: CCTCAGGTGTATGATAATCAAGAGCCACTGAGAGAA...ACCTGTAAATCCTGAGGGATCAGGGAGGCTCTTATAAGGGTGAGGATGGCCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072451.11 ENSMUST00000224372.2 |
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| CDS-3UTR CAA 90 bp | TCAGGCCCCACTGAAACAGAAGCAATAGTCTTAACATGGTCAATACAACACATCAGCTTGAGGAGCCATTaGCTGTCACGGTGCTATCCC | + |
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Preference number: 5 (lower is better) Translates to: SGPTETEAIVLTWSIQHISLRSH*LSRCYP Trigger: GGGATAGCACCGTGACAGCAAATGGCTCCTCAAGCT...GATGTGTTGTATTGACCATGTTAAGACTATTGCTTCTGTTTCAGTGGGGCCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072451.11 ENSMUST00000224372.2 |
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| CDS-3UTR CAA 90 bp | ATAGATGTGGAAGATGGTAGTGTAGCGGTAGATCTGTCCAATCTAGGCACACAGACCTCAAAAAGCTGCTaGCTTCGACTTCGAGATTCT | + |
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Preference number: 5 (lower is better) Translates to: IDVEDGSVAVDLSNLGTQTSKSC*LRLRDS Trigger: AGAATCTCGAAGTCGAAGCAAGCAGCTTTTTGAGGT...CTGTGTGCCTAGATTGGACAGATCTACCGCTACACTACCATCTTCCACATCTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115393.3 |
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| CDS-3UTR CAA 90 bp | AAGATAGTTTCAGGCCCCACTGAAACAGAAGCAATAGTCTTAACATGGTCAATACCTCAGAGCTGCTTTTaGTTCTCCGACCACACTCGA | + |
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Preference number: 5 (lower is better) Translates to: KIVSGPTETEAIVLTWSIPQSCF*FSDHTR Trigger: TCGAGTGTGGTCGGAGAACAAAAAGCAGCTCTGAGG...TATTGACCATGTTAAGACTATTGCTTCTGTTTCAGTGGGGCCTGAAACTATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072451.11 ENSMUST00000224372.2 |
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| CDS-3UTR CAA 90 bp | AGTGGTAAGATAGTTTCAGGCCCCACTGAAACAGAAGCAATAGTCTTAACATGGGGAGGCAGCAGAATGTaGAAAAATACCTCTGGATCA | + |
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Preference number: 5 (lower is better) Translates to: SGKIVSGPTETEAIVLTWGGSRM*KNTSGS Trigger: TGATCCAGAGGTATTTTTCAACATTCTGCTGCCTCC...CCATGTTAAGACTATTGCTTCTGTTTCAGTGGGGCCTGAAACTATCTTACCACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000072451.11 |
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| CDS-3UTR CAA 90 bp | AGTGGTAAGATAGTTTCAGGCCCCACTGAAACAGAAGCAATAGTCTTAACATGGACCTCAAAAAGCTGCTaGCTTCGACTTCGAGATTCT | + |
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Preference number: 5 (lower is better) Translates to: SGKIVSGPTETEAIVLTWTSKSC*LRLRDS Trigger: AGAATCTCGAAGTCGAAGCAAGCAGCTTTTTGAGGT...CCATGTTAAGACTATTGCTTCTGTTTCAGTGGGGCCTGAAACTATCTTACCACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072451.11 ENSMUST00000224372.2 |
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| CDS-3UTR CAA 90 bp | AGTGGTAAGATAGTTTCAGGCCCCACTGAAACAGAAGCAATAGTCTTAACATGGACACCGACTCTTATATaGAGCCATGACAACATGGGT | + |
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Preference number: 5 (lower is better) Translates to: SGKIVSGPTETEAIVLTWTPTLI*SHDNMG Trigger: ACCCATGTTGTCATGGCTCAATATAAGAGTCGGTGT...CCATGTTAAGACTATTGCTTCTGTTTCAGTGGGGCCTGAAACTATCTTACCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224372.2 |
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| CDS-3UTR CAA 90 bp | CACACAGCATGTAATCATATTAACTGTGTTGTGTTTTCACTGCCGGGGCATATTGGAGGCAGCAGAATGTaGAAAAATACCTCTGGATCA | + |
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Preference number: 5 (lower is better) Translates to: HTACNHINCVVFSLPGHIGGSRM*KNTSGS Trigger: TGATCCAGAGGTATTTTTCAACATTCTGCTGCCTCC...AATATGCCCCGGCAGTGAAAACACAACACAGTTAATATGATTACATGCTGTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115393.3 |
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| CDS-3UTR CAA 90 bp | AAGATAGTTTCAGGCCCCACTGAAACAGAAGCAATAGTCTTAACATGGTCAATAACCTCAAAAAGCTGCTaGCTTCGACTTCGAGATTCT | + |
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Preference number: 5 (lower is better) Translates to: KIVSGPTETEAIVLTWSITSKSC*LRLRDS Trigger: AGAATCTCGAAGTCGAAGCAAGCAGCTTTTTGAGGT...TATTGACCATGTTAAGACTATTGCTTCTGTTTCAGTGGGGCCTGAAACTATCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072451.11 ENSMUST00000224372.2 |
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| CDS CAA 72 bp | GACCACACTCGAGACTTGTGGAGGCTGTGTAGGAGCTaGAGGAGCCATTTGCTGTCACGGTGCTATCCCCAT | + |
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Preference number: 6 (lower is better) Translates to: DHTRDLWRLCRS*RSHLLSRCYPH Trigger: ATGGGGATAGCACCGTGACAGCAAATGGCTCCTCAAGCTCCTACACAGCCTCCACAAGTCTCGAGTGTGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072451.11 ENSMUST00000224372.2 |
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| CDS TCA 72 bp | ACCACACTCGAGACTTGTGGAGGCTGTGTAGGAGCTTaGGGAGCCATTTGCTGTCACGGTGCTATCCCCATA | + |
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Preference number: 6 (lower is better) Translates to: TTLETCGGCVGA*GAICCHGAIPI Trigger: TATGGGGATAGCACCGTGACAGCAAATGGCTCCTCAAGCTCCTACACAGCCTCCACAAGTCTCGAGTGTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072451.11 ENSMUST00000224372.2 |
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| CDS CAA 72 bp | CCAGGTCTCGCTCAAGTACTTCCTCAGAGCTGCTTTTaGTTCTCCGACCACACTCGAGACTTGTGGAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: PGLAQVLPQSCF*FSDHTRDLWRL Trigger: CAGCCTCCACAAGTCTCGAGTGTGGTCGGAGAACAAAAAGCAGCTCTGAGGAAGTACTTGAGCGAGACCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072451.11 ENSMUST00000224372.2 |
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| CDS CAA 90 bp | GTACTTCCTCAGAGCTGCTTTTTGTTCTCCGACCACACTCGAGACTaGTGGAGGCTGTGTAGGAGCTTGAGGAGCCATTTGCTGTCACGG | + |
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Preference number: 6 (lower is better) Translates to: VLPQSCFLFSDHTRD*WRLCRSLRSHLLSR Trigger: CCGTGACAGCAAATGGCTCCTCAAGCTCCTACACAGCCTCCACAAGTCTCGAGTGTGGTCGGAGAACAAAAAGCAGCTCTGAGGAAGTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072451.11 ENSMUST00000224372.2 |
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| CDS TCA 72 bp | AGTGCTAAAGGCTCTGTCTTCCTGAGTACAGCTGAGTaGCTTGTCATGACCGCTGGTAGCAGGGGTGCCATA | + |
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Preference number: 6 (lower is better) Translates to: SAKGSVFLSTAE*LVMTAGSRGAI Trigger: TATGGCACCCCTGCTACCAGCGGTCATGACAAGTCACTCAGCTGTACTCAGGAAGACAGAGCCTTTAGCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072451.11 ENSMUST00000115393.3 |
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| CDS GCA 72 bp | CCATTCCCAGGTCTCGCTCAAGTACTTCCTCAGAGCTaGTTTTTGTTCTCCGACCACACTCGAGACTTGTGG | + |
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Preference number: 6 (lower is better) Translates to: PFPGLAQVLPQS*FLFSDHTRDLW Trigger: CCACAAGTCTCGAGTGTGGTCGGAGAACAAAAAGCAGCTCTGAGGAAGTACTTGAGCGAGACCTGGGAATGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072451.11 ENSMUST00000224372.2 |
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| CDS CCA 72 bp | AGCTGCTTTTTGTTCTCCGACCACACTCGAGACTTGTaGAGGCTGTGTAGGAGCTTGAGGAGCCATTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: SCFLFSDHTRDL*RLCRSLRSHLL Trigger: CAGCAAATGGCTCCTCAAGCTCCTACACAGCCTCCACAAGTCTCGAGTGTGGTCGGAGAACAAAAAGCAGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072451.11 ENSMUST00000224372.2 |
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| CDS CAA 72 bp | CAGAGCTGCTTTTTGTTCTCCGACCACACTCGAGACTaGTGGAGGCTGTGTAGGAGCTTGAGGAGCCATTTG | + |
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Preference number: 6 (lower is better) Translates to: QSCFLFSDHTRD*WRLCRSLRSHL Trigger: CAAATGGCTCCTCAAGCTCCTACACAGCCTCCACAAGTCTCGAGTGTGGTCGGAGAACAAAAAGCAGCTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072451.11 ENSMUST00000224372.2 |
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| CDS GCA 72 bp | TCTCTGCCAGGAAGTGTAACACCTCAAAAAGCTGCTTaGTTCGACTTCGAGATTCTACTGACAGGTTGTTAT | + |
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Preference number: 6 (lower is better) Translates to: SLPGSVTPQKAA*FDFEILLTGCY Trigger: ATAACAACCTGTCAGTAGAATCTCGAAGTCGAAGCAAGCAGCTTTTTGAGGTGTTACACTTCCTGGCAGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072451.11 ENSMUST00000115393.3 ENSMUST00000224372.2 |
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