Pregenerated sensors for SLC9A4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026065Ensembl transcript IDs: ENSMUST00000027233.9
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGAGGAAACCAAGAGTGCTTGATGGATTTCTGCAATCCTCAGAGATaGCTGGTTACTCTGAGAAGCGGTGATGTTCTGCTGCACACAGAA | + |
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Preference number: 1 (lower is better) Translates to: GGNQECLMDFCNPQR*LVTLRSGDVLLHTE Trigger: TTCTGTGTGCAGCAGAACATCACCGCTTCTCAGAGTAACCAGTCATCTCTGAGGATTGCAGAAATCCATCAAGCACTCTTGGTTTCCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| 3UTR GCA 90 bp | GACCAATATTTCAGGAGATCTTGTCAATGTGTCTCAATCTGCAAATaGCAGGGGCTGAGCCAGATGAATTTAAAGAGCCCTGCCGTTTCT | + |
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Preference number: 1 (lower is better) Translates to: DQYFRRSCQCVSICK*QGLSQMNLKSPAVS Trigger: AGAAACGGCAGGGCTCTTTAAATTCATCTGGCTCAGCCCCTGGCATTTGCAGATTGAGACACATTGACAAGATCTCCTGAAATATTGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| 3UTR TCA 90 bp | GGATTTCTGCAATCCTCAGAGATGACTGGTTACTCTGAGAAGCGGTaGTGTTCTGCTGCACACAGAATTCATCTACAAAGGTACAAGAGT | + |
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Preference number: 1 (lower is better) Translates to: GFLQSSEMTGYSEKR*CSAAHRIHLQRYKS Trigger: ACTCTTGTACCTTTGTAGATGAATTCTGTGTGCAGCAGAACATCACCGCTTCTCAGAGTAACCAGTCATCTCTGAGGATTGCAGAAATCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| 3UTR TCA 90 bp | CTGGATATATGCCACAGATCAGAGGGTTGTGATAGAAGGTTCCTATaGATTCTAAATGAAGATGCCTTTGTTCTTTGGTTCTTTTCTCAG | + |
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Preference number: 1 (lower is better) Translates to: LDICHRSEGCDRRFL*ILNEDAFVLWFFSQ Trigger: CTGAGAAAAGAACCAAAGAACAAAGGCATCTTCATTTAGAATTCATAGGAACCTTCTATCACAACCCTCTGATCTGTGGCATATATCCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| 3UTR TCA 90 bp | GAAGTCCAAAGTCAGGTTTGGAATAACCATGGTGCACAACTCAACTaGAGAATAGTTACTAAACTCCAGAGCAAAACTTCACAAGTTATA | + |
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Preference number: 1 (lower is better) Translates to: EVQSQVWNNHGAQLN*RIVTKLQSKTSQVI Trigger: TATAACTTGTGAAGTTTTGCTCTGGAGTTTAGTAACTATTCTTCAGTTGAGTTGTGCACCATGGTTATTCCAAACCTGACTTTGGACTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| 3UTR CCA 90 bp | ATTCTAAATGAAGATGCCTTTGTTCTTTGGTTCTTTTCTCAGAGGTaGGATTTTCTAATGGCTTCCATCATTAGGTATCTCCAAATCCCA | + |
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Preference number: 1 (lower is better) Translates to: ILNEDAFVLWFFSQR*DFLMASIIRYLQIP Trigger: TGGGATTTGGAGATACCTAATGATGGAAGCCATTAGAAAATCCCACCTCTGAGAAAAGAACCAAAGAACAAAGGCATCTTCATTTAGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| 3UTR-3UTR TCA 90 bp | GAGATCTTGTCAATGTGTCTCAATCTGCAAATGCCAGGGGCTGAGCCAGATGAATGCAATCCTCAGAGATaGCTGGTTACTCTGAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: EILSMCLNLQMPGAEPDECNPQR*LVTLRS Trigger: GCTTCTCAGAGTAACCAGTCATCTCTGAGGATTGCA...TTCATCTGGCTCAGCCCCTGGCATTTGCAGATTGAGACACATTGACAAGATCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| 3UTR-3UTR GCA 90 bp | CATGTAGTTCTGGATATATGCCACAGATCAGAGGGTTGTGATAGAAGGTTCCTAGCGGTGATGTTCTGCTaGACACAGAATTCATCTACA | + |
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Preference number: 2 (lower is better) Translates to: HVVLDICHRSEGCDRRFLAVMFC*TQNSST Trigger: TGTAGATGAATTCTGTGTGCAGCAGAACATCACCGC...TAGGAACCTTCTATCACAACCCTCTGATCTGTGGCATATATCCAGAACTACATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| 3UTR-3UTR TCA 90 bp | ATTAAAGCCAAGGCATACAACTTGCAAGGTGACCAATATTTCAGGAGATCTTGTGAAACCAAGAGTGCTTaGTGGATTTCTGCAATCCTC | + |
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Preference number: 2 (lower is better) Translates to: IKAKAYNLQGDQYFRRSCETKSA*WISAIL Trigger: GAGGATTGCAGAAATCCATCAAGCACTCTTGGTTTC...ACAAGATCTCCTGAAATATTGGTCACCTTGCAAGTTGTATGCCTTGGCTTTAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| 3UTR-3UTR TCA 90 bp | CTGCCGTTTCTAAGTGATTACAAATTGCATATCCATACAACTTATAGGAATTGCGATAGAAGGTTCCTATaGATTCTAAATGAAGATGCC | + |
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Preference number: 2 (lower is better) Translates to: LPFLSDYKLHIHTTYRNCDRRFL*ILNEDA Trigger: GGCATCTTCATTTAGAATTCATAGGAACCTTCTATC...GCAATTCCTATAAGTTGTATGGATATGCAATTTGTAATCACTTAGAAACGGCAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| 3UTR-3UTR CAA 90 bp | CTCAATCTGCAAATGCCAGGGGCTGAGCCAGATGAATTTAAAGAGCCCTGCCGTATCCCAGCATCCCTCTaGACGTCTAGGAGGAAACCA | + |
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Preference number: 3 (lower is better) Translates to: LNLQMPGAEPDEFKEPCRIPASL*TSRRKP Trigger: TGGTTTCCTCCTAGACGTCAAGAGGGATGCTGGGAT...ACGGCAGGGCTCTTTAAATTCATCTGGCTCAGCCCCTGGCATTTGCAGATTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| 3UTR-3UTR CAA 90 bp | CTCAATCTGCAAATGCCAGGGGCTGAGCCAGATGAATTTAAAGAGCCCTGCCGTAGATGCCTTTGTTCTTaGGTTCTTTTCTCAGAGGTG | + |
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Preference number: 3 (lower is better) Translates to: LNLQMPGAEPDEFKEPCRRCLCS*VLFSEV Trigger: CACCTCTGAGAAAAGAACCAAAGAACAAAGGCATCT...ACGGCAGGGCTCTTTAAATTCATCTGGCTCAGCCCCTGGCATTTGCAGATTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| 3UTR TCA 72 bp | CCATCATTAGGTATCTCCAAATCCCAGCATCCCTCTTaGCGTCTAGGAGGAAACCAAGAGTGCTTGATGGAT | + |
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Preference number: 3 (lower is better) Translates to: PSLGISKSQHPS*RLGGNQECLMD Trigger: ATCCATCAAGCACTCTTGGTTTCCTCCTAGACGTCAAGAGGGATGCTGGGATTTGGAGATACCTAATGATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| 3UTR TCA 72 bp | CAATCCTCAGAGATGACTGGTTACTCTGAGAAGCGGTaGTGTTCTGCTGCACACAGAATTCATCTACAAAGG | + |
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Preference number: 3 (lower is better) Translates to: QSSEMTGYSEKR*CSAAHRIHLQR Trigger: CCTTTGTAGATGAATTCTGTGTGCAGCAGAACATCACCGCTTCTCAGAGTAACCAGTCATCTCTGAGGATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| 3UTR TCA 72 bp | TGGATTTCTGCAATCCTCAGAGATGACTGGTTACTCTaGGAAGCGGTGATGTTCTGCTGCACACAGAATTCA | + |
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Preference number: 3 (lower is better) Translates to: WISAILRDDWLL*EAVMFCCTQNS Trigger: TGAATTCTGTGTGCAGCAGAACATCACCGCTTCTCAGAGTAACCAGTCATCTCTGAGGATTGCAGAAATCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| 3UTR GCA 72 bp | TTCAGGAGATCTTGTCAATGTGTCTCAATCTGCAAATaGCAGGGGCTGAGCCAGATGAATTTAAAGAGCCCT | + |
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Preference number: 3 (lower is better) Translates to: FRRSCQCVSICK*QGLSQMNLKSP Trigger: AGGGCTCTTTAAATTCATCTGGCTCAGCCCCTGGCATTTGCAGATTGAGACACATTGACAAGATCTCCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| 3UTR TCA 72 bp | TGCCACAGATCAGAGGGTTGTGATAGAAGGTTCCTATaGATTCTAAATGAAGATGCCTTTGTTCTTTGGTTC | + |
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Preference number: 3 (lower is better) Translates to: CHRSEGCDRRFL*ILNEDAFVLWF Trigger: GAACCAAAGAACAAAGGCATCTTCATTTAGAATTCATAGGAACCTTCTATCACAACCCTCTGATCTGTGGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| 3UTR TCA 72 bp | TACAAATTGCATATCCATACAACTTATAGGAATTGCTaGCCGAGCACATGTAGTTCTGGATATATGCCACAG | + |
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Preference number: 3 (lower is better) Translates to: YKLHIHTTYRNC*PSTCSSGYMPQ Trigger: CTGTGGCATATATCCAGAACTACATGTGCTCGGTCAGCAATTCCTATAAGTTGTATGGATATGCAATTTGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| 3UTR TCA 72 bp | AGTCAGGTTTGGAATAACCATGGTGCACAACTCAACTaGAGAATAGTTACTAAACTCCAGAGCAAAACTTCA | + |
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Preference number: 3 (lower is better) Translates to: SQVWNNHGAQLN*RIVTKLQSKTS Trigger: TGAAGTTTTGCTCTGGAGTTTAGTAACTATTCTTCAGTTGAGTTGTGCACCATGGTTATTCCAAACCTGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS-3UTR TCA 90 bp | GCGGTGATGTTCTGCTGCACACAGAATTCATCTACAAAGGTACAAGAGTGTGGCGGCAGCTCTCTGGCATaGGGTGCGGCAGCCTGTGGT | + |
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Preference number: 4 (lower is better) Translates to: AVMFCCTQNSSTKVQECGGSSLA*GAAACG Trigger: ACCACAGGCTGCCGCACCTCATGCCAGAGAGCTGCC...GCCACACTCTTGTACCTTTGTAGATGAATTCTGTGTGCAGCAGAACATCACCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS-3UTR TCA 90 bp | GCGGTGATGTTCTGCTGCACACAGAATTCATCTACAAAGGTACAAGAGTGTGGCGGTGGGTGCCAAAAATaGTGCCGCCCACCAGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: AVMFCCTQNSSTKVQECGGGCQK*CRPPEL Trigger: GAGCTCTGGTGGGCGGCATCATTTTTGGCACCCACC...GCCACACTCTTGTACCTTTGTAGATGAATTCTGTGTGCAGCAGAACATCACCGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS-3UTR GCA 90 bp | CTCAATCTGCAAATGCCAGGGGCTGAGCCAGATGAATTTAAAGAGCCCTGCCGTAAACCGAGCATCAGGTaGCTGCTGGGCAGTGGGATT | + |
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Preference number: 4 (lower is better) Translates to: LNLQMPGAEPDEFKEPCRKPSIR*LLGSGI Trigger: AATCCCACTGCCCAGCAGGCACCTGATGCTCGGTTT...ACGGCAGGGCTCTTTAAATTCATCTGGCTCAGCCCCTGGCATTTGCAGATTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS-3UTR GCA 90 bp | CTACAAAGGTACAAGAGTGTGGCTCAGCCTTTAAGTTCACTGAGAGCTTACCCTGGGTTCAGCAGCCCTTaGCTCTCTCCTTGCTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: LQRYKSVAQPLSSLRAYPGFSSP*LSPCCL Trigger: CAGGCAGCAAGGAGAGAGGCAAGGGCTGCTGAACCC...AGGGTAAGCTCTCAGTGAACTTAAAGGCTGAGCCACACTCTTGTACCTTTGTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS-3UTR TCA 90 bp | TACAAGAGTGTGGCTCAGCCTTTAAGTTCACTGAGAGCTTACCCTGTAGAATGGAGGGCCTGGTGGGCATaGAGTAGCCGCTTTCCAACA | + |
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Preference number: 4 (lower is better) Translates to: YKSVAQPLSSLRAYPVEWRAWWA*SSRFPT Trigger: TGTTGGAAAGCGGCTACTTCATGCCCACCAGGCCCT...CCATTCTACAGGGTAAGCTCTCAGTGAACTTAAAGGCTGAGCCACACTCTTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS-3UTR TCA 90 bp | TACAAGAGTGTGGCTCAGCCTTTAAGTTCACTGAGAGCTTACCCTGTAGAATGGCAATGCCAAAGGCATTaGTCAGGGCTCCCAGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: YKSVAQPLSSLRAYPVEWQCQRH*SGLPGL Trigger: CAGGCCTGGGAGCCCTGATCAATGCCTTTGGCATTG...CCATTCTACAGGGTAAGCTCTCAGTGAACTTAAAGGCTGAGCCACACTCTTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS-3UTR TCA 90 bp | GCGGTGATGTTCTGCTGCACACAGAATTCATCTACAAAGGTACAAGAGTGTGGCGGTCGACCGCTGAGATaGGGCTGCCAAATAGCAGAT | + |
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Preference number: 4 (lower is better) Translates to: AVMFCCTQNSSTKVQECGGRPLR*GCQIAD Trigger: ATCTGCTATTTGGCAGCCTCATCTCAGCGGTCGACC...GCCACACTCTTGTACCTTTGTAGATGAATTCTGTGTGCAGCAGAACATCACCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS-3UTR TCA 90 bp | CTCAATCTGCAAATGCCAGGGGCTGAGCCAGATGAATTTAAAGAGCCCTGCCGTCTTGATGGTCGTGTATaGTGTCTGGGACACGTTCTC | + |
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Preference number: 4 (lower is better) Translates to: LNLQMPGAEPDEFKEPCRLDGRV*CLGHVL Trigger: GAGAACGTGTCCCAGACATCATACACGACCATCAAG...ACGGCAGGGCTCTTTAAATTCATCTGGCTCAGCCCCTGGCATTTGCAGATTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS-3UTR GCA 90 bp | GCTGGGAAAATTAGCAAGCTAAACTGTGAAGTCCAAAGTCAGGTTTGGAATAACGGAGGACATCCATCCTaGGCCATCCGGCCTGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: AGKISKLNCEVQSQVWNNGGHPS*AIRPGP Trigger: AGGACCAGGCCGGATGGCGCAGGATGGATGTCCTCC...GTTATTCCAAACCTGACTTTGGACTTCACAGTTTAGCTTGCTAATTTTCCCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS-3UTR CCA 90 bp | GCTGGGAAAATTAGCAAGCTAAACTGTGAAGTCCAAAGTCAGGTTTGGAATAACCCCCAGGGCAGACTCTaGCCTTTCCGCATGCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: AGKISKLNCEVQSQVWNNPQGRL*PFRMLS Trigger: GGAGAGCATGCGGAAAGGCCAGAGTCTGCCCTGGGG...GTTATTCCAAACCTGACTTTGGACTTCACAGTTTAGCTTGCTAATTTTCCCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS-3UTR TCA 90 bp | TCATCTACAAAGGTACAAGAGTGTGGCTCAGCCTTTAAGTTCACTGAGAGCTTATCTGGACAGGATTGCTaGGGTCTCCTCCTCCGTCTG | + |
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Preference number: 4 (lower is better) Translates to: SSTKVQECGSAFKFTESLSGQDC*GLLLRL Trigger: CAGACGGAGGAGGAGACCTCAGCAATCCTGTCCAGA...TAAGCTCTCAGTGAACTTAAAGGCTGAGCCACACTCTTGTACCTTTGTAGATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS-3UTR GCA 90 bp | CTGCCGTTTCTAAGTGATTACAAATTGCATATCCATACAACTTATAGGAATTGCCAGGGCTCCCAGGCCTaGCCACCACAGGATGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: LPFLSDYKLHIHTTYRNCQGSQA*PPQDGA Trigger: GGCTCCATCCTGTGGTGGGCAGGCCTGGGAGCCCTG...GCAATTCCTATAAGTTGTATGGATATGCAATTTGTAATCACTTAGAAACGGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS-3UTR GCA 90 bp | GAGATCTTGTCAATGTGTCTCAATCTGCAAATGCCAGGGGCTGAGCCAGATGAACCTTGCCTCTCTCCTTaGTGCCTGAGGATTGCTATA | + |
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Preference number: 4 (lower is better) Translates to: EILSMCLNLQMPGAEPDEPCLSP*CLRIAI Trigger: TATAGCAATCCTCAGGCAGCAAGGAGAGAGGCAAGG...TTCATCTGGCTCAGCCCCTGGCATTTGCAGATTGAGACACATTGACAAGATCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS-3UTR GCA 90 bp | CTACAAAGGTACAAGAGTGTGGCTCAGCCTTTAAGTTCACTGAGAGCTTACCCTGCCTTCTCTCCTCTCTaGAGCCTCTTCATAGGGATC | + |
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Preference number: 4 (lower is better) Translates to: LQRYKSVAQPLSSLRAYPAFSPL*SLFIGI Trigger: GATCCCTATGAAGAGGCTGCAGAGAGGAGAGAAGGC...AGGGTAAGCTCTCAGTGAACTTAAAGGCTGAGCCACACTCTTGTACCTTTGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS-3UTR CCA 90 bp | TACAAGAGTGTGGCTCAGCCTTTAAGTTCACTGAGAGCTTACCCTGTAGAATGGTCAGAATGTCCCGCATaGACTCCACGTCTTCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: YKSVAQPLSSLRAYPVEWSECPA*TPRLQE Trigger: CTCCTGAAGACGTGGAGTCCATGCGGGACATTCTGA...CCATTCTACAGGGTAAGCTCTCAGTGAACTTAAAGGCTGAGCCACACTCTTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS-3UTR CCA 90 bp | CAATGTGTCTCAATCTGCAAATGCCAGGGGCTGAGCCAGATGAATTTAAAGAGCTGCCATCATCATCTGTaGGTTCAGCAGCCCTTGCCT | + |
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Preference number: 4 (lower is better) Translates to: QCVSICKCQGLSQMNLKSCHHHL*VQQPLP Trigger: AGGCAAGGGCTGCTGAACCCACAGATGATGATGGCA...GCTCTTTAAATTCATCTGGCTCAGCCCCTGGCATTTGCAGATTGAGACACATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS-3UTR TCA 90 bp | ATGTGTCTCAATCTGCAAATGCCAGGGGCTGAGCCAGATGAATTTAAAGAGCCCAAATGCTTGAATCCATaGCCGGAGGCGATTTGTGGT | + |
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Preference number: 4 (lower is better) Translates to: MCLNLQMPGAEPDEFKEPKCLNP*PEAICG Trigger: ACCACAAATCGCCTCCGGTCATGGATTCAAGCATTT...GGGCTCTTTAAATTCATCTGGCTCAGCCCCTGGCATTTGCAGATTGAGACACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS-3UTR TCA 90 bp | GCGGTGATGTTCTGCTGCACACAGAATTCATCTACAAAGGTACAAGAGTGTGGCCTCTTGAGTGTATGCTaGACATCAAGGGCTGGAATC | + |
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Preference number: 4 (lower is better) Translates to: AVMFCCTQNSSTKVQECGLLSVC*TSRAGI Trigger: GATTCCAGCCCTTGATGTTCAGCATACACTCAAGAG...GCCACACTCTTGTACCTTTGTAGATGAATTCTGTGTGCAGCAGAACATCACCGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS-3UTR GCA 90 bp | CAATGTGTCTCAATCTGCAAATGCCAGGGGCTGAGCCAGATGAATTTAAAGAGCCTTTTTCATGGTCACTaGGCAAGCTGTGATGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: QCVSICKCQGLSQMNLKSLFHGH*ASCDGQ Trigger: CTGGCCATCACAGCTTGCGCAGTGACCATGAAAAAG...GCTCTTTAAATTCATCTGGCTCAGCCCCTGGCATTTGCAGATTGAGACACATTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS-3UTR GCA 90 bp | CTACAAAGGTACAAGAGTGTGGCTCAGCCTTTAAGTTCACTGAGAGCTTACCCTACTTGTGGTGCTCTGTaGTGTGTCTGTGTTCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: LQRYKSVAQPLSSLRAYPTCGAL*CVCVQL Trigger: CAGCTGAACACAGACACAGCACAGAGCACCACAAGT...AGGGTAAGCTCTCAGTGAACTTAAAGGCTGAGCCACACTCTTGTACCTTTGTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS-3UTR CCA 90 bp | CTGCCGTTTCTAAGTGATTACAAATTGCATATCCATACAACTTATAGGAATTGCCTGCGCCATCCGGCCTaGTCCTCCCAGCTGGTGTTG | + |
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Preference number: 4 (lower is better) Translates to: LPFLSDYKLHIHTTYRNCLRHPA*SSQLVL Trigger: CAACACCAGCTGGGAGGACCAGGCCGGATGGCGCAG...GCAATTCCTATAAGTTGTATGGATATGCAATTTGTAATCACTTAGAAACGGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS-3UTR TCA 90 bp | CAATGTGTCTCAATCTGCAAATGCCAGGGGCTGAGCCAGATGAATTTAAAGAGCAAGGGACCCTGCTCTTaGGTGTATGCTGAACATCAA | + |
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Preference number: 4 (lower is better) Translates to: QCVSICKCQGLSQMNLKSKGPCS*VYAEHQ Trigger: TTGATGTTCAGCATACACTCAAGAGCAGGGTCCCTT...GCTCTTTAAATTCATCTGGCTCAGCCCCTGGCATTTGCAGATTGAGACACATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS-3UTR GCA 90 bp | TACAAGAGTGTGGCTCAGCCTTTAAGTTCACTGAGAGCTTACCCTGTAGAATGGCTGTTCATTCACACGTaGCTCCTCAAAAACAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: YKSVAQPLSSLRAYPVEWLFIHT*LLKNSQ Trigger: CTGGCTGTTTTTGAGGAGGCACGTGTGAATGAACAG...CCATTCTACAGGGTAAGCTCTCAGTGAACTTAAAGGCTGAGCCACACTCTTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS-3UTR GCA 90 bp | TCATCTACAAAGGTACAAGAGTGTGGCTCAGCCTTTAAGTTCACTGAGAGCTTAAAGGGAGAAGCTTCCTaGTCCTCTCACACCGCTGTA | + |
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Preference number: 4 (lower is better) Translates to: SSTKVQECGSAFKFTESLKGEAS*SSHTAV Trigger: TACAGCGGTGTGAGAGGAGCAGGAAGCTTCTCCCTT...TAAGCTCTCAGTGAACTTAAAGGCTGAGCCACACTCTTGTACCTTTGTAGATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS-3UTR CCA 90 bp | ATGTGTCTCAATCTGCAAATGCCAGGGGCTGAGCCAGATGAATTTAAAGAGCCCGATGGAAACCTATCTTaGCAAGAGATGCGAGCAGTA | + |
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Preference number: 4 (lower is better) Translates to: MCLNLQMPGAEPDEFKEPDGNLS*QEMRAV Trigger: TACTGCTCGCATCTCTTGCCAAGATAGGTTTCCATC...GGGCTCTTTAAATTCATCTGGCTCAGCCCCTGGCATTTGCAGATTGAGACACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS-3UTR CCA 90 bp | TCATCTACAAAGGTACAAGAGTGTGGCTCAGCCTTTAAGTTCACTGAGAGCTTAGGAGGCGATTTGTGGTaGGTGCCAAAAATGATGCCG | + |
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Preference number: 4 (lower is better) Translates to: SSTKVQECGSAFKFTESLGGDLW*VPKMMP Trigger: CGGCATCATTTTTGGCACCCACCACAAATCGCCTCC...TAAGCTCTCAGTGAACTTAAAGGCTGAGCCACACTCTTGTACCTTTGTAGATGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS-3UTR CCA 90 bp | CAATGTGTCTCAATCTGCAAATGCCAGGGGCTGAGCCAGATGAATTTAAAGAGCCTGCCCACCACAGGATaGAGCCAATATTCTCAAAGA | + |
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Preference number: 4 (lower is better) Translates to: QCVSICKCQGLSQMNLKSLPTTG*SQYSQR Trigger: TCTTTGAGAATATTGGCTCCATCCTGTGGTGGGCAG...GCTCTTTAAATTCATCTGGCTCAGCCCCTGGCATTTGCAGATTGAGACACATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS-3UTR TCA 90 bp | CATGTAGTTCTGGATATATGCCACAGATCAGAGGGTTGTGATAGAAGGTTCCTAGAGGAAGTAAATGCTTaGATCCATGACCGGAGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: HVVLDICHRSEGCDRRFLEEVNA*IHDRRR Trigger: TCGCCTCCGGTCATGGATTCAAGCATTTACTTCCTC...TAGGAACCTTCTATCACAACCCTCTGATCTGTGGCATATATCCAGAACTACATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
||
| CDS-3UTR GCA 90 bp | TCATCTACAAAGGTACAAGAGTGTGGCTCAGCCTTTAAGTTCACTGAGAGCTTATGCCTCTCTCCTTGCTaGCTGAGGATTGCTATAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSTKVQECGSAFKFTESLCLSPC*LRIAIR Trigger: CCTTATAGCAATCCTCAGGCAGCAAGGAGAGAGGCA...TAAGCTCTCAGTGAACTTAAAGGCTGAGCCACACTCTTGTACCTTTGTAGATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
||
| CDS-3UTR GCA 90 bp | CAATGTGTCTCAATCTGCAAATGCCAGGGGCTGAGCCAGATGAATTTAAAGAGCGGAATCCTGAATCAGTaGCATCATCATCTGTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: QCVSICKCQGLSQMNLKSGILNQ*HHHLWV Trigger: AACCCACAGATGATGATGGCACTGATTCAGGATTCC...GCTCTTTAAATTCATCTGGCTCAGCCCCTGGCATTTGCAGATTGAGACACATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
||
| CDS-3UTR CCA 90 bp | TCATCTACAAAGGTACAAGAGTGTGGCTCAGCCTTTAAGTTCACTGAGAGCTTAACCGGAGGCGATTTGTaGTGGGTGCCAAAAATGATG | + |
|
Preference number: 4 (lower is better) Translates to: SSTKVQECGSAFKFTESLTGGDL*WVPKMM Trigger: CATCATTTTTGGCACCCACCACAAATCGCCTCCGGT...TAAGCTCTCAGTGAACTTAAAGGCTGAGCCACACTCTTGTACCTTTGTAGATGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
||
| CDS-3UTR CCA 90 bp | CATGTAGTTCTGGATATATGCCACAGATCAGAGGGTTGTGATAGAAGGTTCCTAGTCGTGTATGATGTCTaGGACACGTTCTCTTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: HVVLDICHRSEGCDRRFLVVYDV*DTFSST Trigger: CGTGGAAGAGAACGTGTCCCAGACATCATACACGAC...TAGGAACCTTCTATCACAACCCTCTGATCTGTGGCATATATCCAGAACTACATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
||
| CDS-3UTR CCA 90 bp | TCATCTACAAAGGTACAAGAGTGTGGCTCAGCCTTTAAGTTCACTGAGAGCTTACAGATACCTGACCAGTaGGCCAATTGTGATTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSTKVQECGSAFKFTESLQIPDQ*ANCDSL Trigger: CAGGGAATCACAATTGGCCCACTGGTCAGGTATCTG...TAAGCTCTCAGTGAACTTAAAGGCTGAGCCACACTCTTGTACCTTTGTAGATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
||
| CDS-3UTR CCA 90 bp | GCTGGGAAAATTAGCAAGCTAAACTGTGAAGTCCAAAGTCAGGTTTGGAATAACCAGACTGATAGGGTGTaGGAGAAGCCACAGAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: AGKISKLNCEVQSQVWNNQTDRV*EKPQSS Trigger: TGAGCTCTGTGGCTTCTCCCACACCCTATCAGTCTG...GTTATTCCAAACCTGACTTTGGACTTCACAGTTTAGCTTGCTAATTTTCCCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
||
| CDS-3UTR TCA 90 bp | GAGATCTTGTCAATGTGTCTCAATCTGCAAATGCCAGGGGCTGAGCCAGATGAAATCGCAGAGATGTTCTaGGTGAAACGTGTGATAAAT | + |
|
Preference number: 4 (lower is better) Translates to: EILSMCLNLQMPGAEPDEIAEMF*VKRVIN Trigger: ATTTATCACACGTTTCACTCAGAACATCTCTGCGAT...TTCATCTGGCTCAGCCCCTGGCATTTGCAGATTGAGACACATTGACAAGATCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
||
| CDS-3UTR GCA 90 bp | CTACAAAGGTACAAGAGTGTGGCTCAGCCTTTAAGTTCACTGAGAGCTTACCCTAGAATCTCTTTGGCTTaGTTCTCACTTGTTTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LQRYKSVAQPLSSLRAYPRISLA*FSLVWG Trigger: ACCCCAAACAAGTGAGAAGCAAGCCAAAGAGATTCT...AGGGTAAGCTCTCAGTGAACTTAAAGGCTGAGCCACACTCTTGTACCTTTGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
||
| CDS-3UTR CCA 90 bp | TCATCTACAAAGGTACAAGAGTGTGGCTCAGCCTTTAAGTTCACTGAGAGCTTAATTGCTCTCCAGATCTaGCAGAAGAGCAGAGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSTKVQECGSAFKFTESLIALQI*QKSRVK Trigger: CTTCACTCTGCTCTTCTGCCAGATCTGGAGAGCAAT...TAAGCTCTCAGTGAACTTAAAGGCTGAGCCACACTCTTGTACCTTTGTAGATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
||
| CDS-3UTR CCA 90 bp | ATTAAAGCCAAGGCATACAACTTGCAAGGTGACCAATATTTCAGGAGATCTTGTTGGAGCAAAGGACTGTaGGACTTGTGGTGCTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: IKAKAYNLQGDQYFRRSCWSKGL*DLWCSV Trigger: CACAGAGCACCACAAGTCCCACAGTCCTTTGCTCCA...ACAAGATCTCCTGAAATATTGGTCACCTTGCAAGTTGTATGCCTTGGCTTTAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
||
| CDS-3UTR GCA 90 bp | TCATCTACAAAGGTACAAGAGTGTGGCTCAGCCTTTAAGTTCACTGAGAGCTTAGGTAAATACGCTGATTaGTCTCCAGATCTGGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SSTKVQECGSAFKFTESLGKYAD*SPDLAE Trigger: TTCTGCCAGATCTGGAGAGCAATCAGCGTATTTACC...TAAGCTCTCAGTGAACTTAAAGGCTGAGCCACACTCTTGTACCTTTGTAGATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
||
| CDS-3UTR CCA 90 bp | ATTAAAGCCAAGGCATACAACTTGCAAGGTGACCAATATTTCAGGAGATCTTGTTCCCTCAAGGTGTTCTaGCGACGGATCAGAATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IKAKAYNLQGDQYFRRSCSLKVF*RRIRIS Trigger: AGAGATTCTGATCCGTCGCCAGAACACCTTGAGGGA...ACAAGATCTCCTGAAATATTGGTCACCTTGCAAGTTGTATGCCTTGGCTTTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
||
| CDS-3UTR TCA 90 bp | CAATGTGTCTCAATCTGCAAATGCCAGGGGCTGAGCCAGATGAATTTAAAGAGCTATGGTCAAACTTCTTaGACTTATCTCTCACTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QCVSICKCQGLSQMNLKSYGQTS*TYLSLG Trigger: ACCAAGTGAGAGATAAGTTCAAGAAGTTTGACCATA...GCTCTTTAAATTCATCTGGCTCAGCCCCTGGCATTTGCAGATTGAGACACATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
||
| CDS-3UTR GCA 90 bp | CTGCCGTTTCTAAGTGATTACAAATTGCATATCCATACAACTTATAGGAATTGCCTGTGGGACTTGTGGTaGTCTGTGCTGTGTCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LPFLSDYKLHIHTTYRNCLWDLW*SVLCLC Trigger: ACACAGACACAGCACAGAGCACCACAAGTCCCACAG...GCAATTCCTATAAGTTGTATGGATATGCAATTTGTAATCACTTAGAAACGGCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
||
| CDS-3UTR GCA 90 bp | CAATGTGTCTCAATCTGCAAATGCCAGGGGCTGAGCCAGATGAATTTAAAGAGCATGTCCTCAAATTTGTaGATCTTAGTGAAGGCAATT | + |
|
Preference number: 4 (lower is better) Translates to: QCVSICKCQGLSQMNLKSMSSNL*ILVKAI Trigger: AATTGCCTTCACTAAGATGCACAAATTTGAGGACAT...GCTCTTTAAATTCATCTGGCTCAGCCCCTGGCATTTGCAGATTGAGACACATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
||
| CDS-3UTR GCA 90 bp | ATTAAAGCCAAGGCATACAACTTGCAAGGTGACCAATATTTCAGGAGATCTTGTTTGCTGCCTGAGGATTaGTATAAGGAAAGGAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: IKAKAYNLQGDQYFRRSCLLPED*YKERRD Trigger: ATCTCTCCTTTCCTTATAGCAATCCTCAGGCAGCAA...ACAAGATCTCCTGAAATATTGGTCACCTTGCAAGTTGTATGCCTTGGCTTTAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
||
| CDS-3UTR CCA 90 bp | GCTGGGAAAATTAGCAAGCTAAACTGTGAAGTCCAAAGTCAGGTTTGGAATAACTGCTTCTCACTTGTTTaGGGTTTGAGGTTGTATTTG | + |
|
Preference number: 4 (lower is better) Translates to: AGKISKLNCEVQSQVWNNCFSLV*GLRLYL Trigger: CAAATACAACCTCAAACCCCAAACAAGTGAGAAGCA...GTTATTCCAAACCTGACTTTGGACTTCACAGTTTAGCTTGCTAATTTTCCCAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
||
| CDS-3UTR GCA 90 bp | CTGCCGTTTCTAAGTGATTACAAATTGCATATCCATACAACTTATAGGAATTGCGTCGAACTTGGTACATaGTTCTTGTCAGAATGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LPFLSDYKLHIHTTYRNCVELGT*FLSECP Trigger: GGGACATTCTGACAAGAAGCATGTACCAAGTTCGAC...GCAATTCCTATAAGTTGTATGGATATGCAATTTGTAATCACTTAGAAACGGCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
||
| CDS CCA 90 bp | TATCGAAAGTTCTTGGTGCCTGCCGGCTTTCCCCAGGGCAGACTCTaGCCTTTCCGCATGCTCTCCCTCAAGGTGTTCTGGCGACGGATC | + |
|
Preference number: 5 (lower is better) Translates to: YRKFLVPAGFPQGRL*PFRMLSLKVFWRRI Trigger: GATCCGTCGCCAGAACACCTTGAGGGAGAGCATGCGGAAAGGCCAGAGTCTGCCCTGGGGAAAGCCGGCAGGCACCAAGAACTTTCGATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
||
| CDS TCA 90 bp | CTCTGTGCTGTGTCTGTGTTCAGCTGTCCATCTGGACAGGATTGCTaGGGTCTCCTCCTCCGTCTGCTCTCCAGAGTCATACTCCTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: LCAVSVFSCPSGQDC*GLLLRLLSRVILLG Trigger: GCCGAGGAGTATGACTCTGGAGAGCAGACGGAGGAGGAGACCTCAGCAATCCTGTCCAGATGGACAGCTGAACACAGACACAGCACAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
||
| CDS GCA 90 bp | GAGAGAGAGCCCAATGCCAAAGGCATTGATCAGGGCTCCCAGGCCTaGCCACCACAGGATGGAGCCAATATTCTCAAAGAAGGGCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: EREPNAKGIDQGSQA*PPQDGANILKEGPG Trigger: ACCAGGCCCTTCTTTGAGAATATTGGCTCCATCCTGTGGTGGGCAGGCCTGGGAGCCCTGATCAATGCCTTTGGCATTGGGCTCTCTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
||
| CDS TCA 90 bp | TCAGAATGTCCCGCATGGACTCCACGTCTTCAGGAGAAAGCCGCTTaGTTCCCTGTATCCTCTCAGACTGATAGGGTGTGGGAGAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SECPAWTPRLQEKAA*FPVSSQTDRVWEKP Trigger: TGGCTTCTCCCACACCCTATCAGTCTGAGAGGATACAGGGAATCAAGCGGCTTTCTCCTGAAGACGTGGAGTCCATGCGGGACATTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS-3UTR CAA 90 bp | GCGGTGATGTTCTGCTGCACACAGAATTCATCTACAAAGGTACAAGAGTGTGGCACGCTGATTCCATCATaGAGCAGGGCCTCCCCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: AVMFCCTQNSSTKVQECGTLIPS*SRASPK Trigger: CTTCGGGGAGGCCCTGCTCAATGATGGAATCAGCGT...GCCACACTCTTGTACCTTTGTAGATGAATTCTGTGTGCAGCAGAACATCACCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS TCA 90 bp | ACACGTTCTCTTCCACGTACTTTTTCATGGTCACTGCGCAAGCTGTaGTGGCCAGGATTCCTGAGAGATAAAGCGTCTCGGCTGCTAAGT | + |
|
Preference number: 5 (lower is better) Translates to: TRSLPRTFSWSLRKL*WPGFLRDKASRLLS Trigger: ACTTAGCAGCCGAGACGCTTTATCTCTCAGGAATCCTGGCCATCACAGCTTGCGCAGTGACCATGAAAAAGTACGTGGAAGAGAACGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
||
| CDS-3UTR CAA 90 bp | GCGGTGATGTTCTGCTGCACACAGAATTCATCTACAAAGGTACAAGAGTGTGGCATGACCGGAGGCGATTaGTGGTGGGTGCCAAAAATG | + |
|
Preference number: 5 (lower is better) Translates to: AVMFCCTQNSSTKVQECGMTGGD*WWVPKM Trigger: CATTTTTGGCACCCACCACAAATCGCCTCCGGTCAT...GCCACACTCTTGTACCTTTGTAGATGAATTCTGTGTGCAGCAGAACATCACCGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS-3UTR CAA 90 bp | TCATCTACAAAGGTACAAGAGTGTGGCTCAGCCTTTAAGTTCACTGAGAGCTTATGGGTTCAGCAGCCCTaGCCTCTCTCCTTGCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SSTKVQECGSAFKFTESLWVQQP*PLSLLP Trigger: AGGCAGCAAGGAGAGAGGCAAGGGCTGCTGAACCCA...TAAGCTCTCAGTGAACTTAAAGGCTGAGCCACACTCTTGTACCTTTGTAGATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS TCA 90 bp | ATAGTCATAATCCAGTTCAAAAACAGATATCCCTTCATCGGGGTCTaGGCTAGAAGCAGCAAACCGAGCATCAGGTGCCTGCTGGGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: IVIIQFKNRYPFIGV*ARSSKPSIRCLLGS Trigger: ACTGCCCAGCAGGCACCTGATGCTCGGTTTGCTGCTTCTAGCTCAGACCCCGATGAAGGGATATCTGTTTTTGAACTGGATTATGACTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS GCA 90 bp | AGTGCCATCATCATCTGTGGGTTCAGCAGCCCTTGCCTCTCTCCTTaGTGCCTGAGGATTGCTATAAGGAAAGGAGAGATATCGAAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: SAIIICGFSSPCLSP*CLRIAIRKGEISKV Trigger: AACTTTCGATATCTCTCCTTTCCTTATAGCAATCCTCAGGCAGCAAGGAGAGAGGCAAGGGCTGCTGAACCCACAGATGATGATGGCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS-3UTR CAA 90 bp | GAGATCTTGTCAATGTGTCTCAATCTGCAAATGCCAGGGGCTGAGCCAGATGAAAGATTGTGTAGCAGGTaGATGTCACCAAGGCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: EILSMCLNLQMPGAEPDERLCSR*MSPRPK Trigger: CTTTGGCCTTGGTGACATCAACCTGCTACACAATCT...TTCATCTGGCTCAGCCCCTGGCATTTGCAGATTGAGACACATTGACAAGATCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
||
| CDS-3UTR CAA 90 bp | CATGTAGTTCTGGATATATGCCACAGATCAGAGGGTTGTGATAGAAGGTTCCTACCCTTGCCTCTCTCCTaGCTGCCTGAGGATTGCTAT | + |
|
Preference number: 5 (lower is better) Translates to: HVVLDICHRSEGCDRRFLPLPLS*LPEDCY Trigger: ATAGCAATCCTCAGGCAGCAAGGAGAGAGGCAAGGG...TAGGAACCTTCTATCACAACCCTCTGATCTGTGGCATATATCCAGAACTACATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
||
| CDS-3UTR CAA 90 bp | GCTGGGAAAATTAGCAAGCTAAACTGTGAAGTCCAAAGTCAGGTTTGGAATAACTCCATCTGGACAGGATaGCTGAGGTCTCCTCCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: AGKISKLNCEVQSQVWNNSIWTG*LRSPPP Trigger: CGGAGGAGGAGACCTCAGCAATCCTGTCCAGATGGA...GTTATTCCAAACCTGACTTTGGACTTCACAGTTTAGCTTGCTAATTTTCCCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
||
| CDS GCA 90 bp | GGTTGTATTTGTTGTAGGATAGGGTTCTTTGTCGAACTTGGTACATaGTTCTTGTCAGAATGTCCCGCATGGACTCCACGTCTTCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GCICCRIGFFVELGT*FLSECPAWTPRLQE Trigger: CTCCTGAAGACGTGGAGTCCATGCGGGACATTCTGACAAGAAGCATGTACCAAGTTCGACAAAGAACCCTATCCTACAACAAATACAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
||
| CDS-3UTR CAA 90 bp | CAATGTGTCTCAATCTGCAAATGCCAGGGGCTGAGCCAGATGAATTTAAAGAGCAGATGGAAACCTATCTaGGCAAGAGATGCGAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: QCVSICKCQGLSQMNLKSRWKPI*ARDASS Trigger: ACTGCTCGCATCTCTTGCCAAGATAGGTTTCCATCT...GCTCTTTAAATTCATCTGGCTCAGCCCCTGGCATTTGCAGATTGAGACACATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
||
| CDS-3UTR CAA 90 bp | GCGGTGATGTTCTGCTGCACACAGAATTCATCTACAAAGGTACAAGAGTGTGGCAAACGATGCTTGATTTaGGCAGGTTCCTCCGGATTA | + |
|
Preference number: 5 (lower is better) Translates to: AVMFCCTQNSSTKVQECGKRCLI*AGSSGL Trigger: TAATCCGGAGGAACCTGCCAAAATCAAGCATCGTTT...GCCACACTCTTGTACCTTTGTAGATGAATTCTGTGTGCAGCAGAACATCACCGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS-3UTR CAA 90 bp | CTCAATCTGCAAATGCCAGGGGCTGAGCCAGATGAATTTAAAGAGCCCTGCCGTTTGCTTCTCACTTGTTaGGGGTTTGAGGTTGTATTT | + |
|
Preference number: 5 (lower is better) Translates to: LNLQMPGAEPDEFKEPCRLLLTC*GFEVVF Trigger: AAATACAACCTCAAACCCCAAACAAGTGAGAAGCAA...ACGGCAGGGCTCTTTAAATTCATCTGGCTCAGCCCCTGGCATTTGCAGATTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
||
| CDS GCA 90 bp | GCACACCCAGCCAAAATGTCCACCGCTTCTATGTCCTCAAATTTGTaGATCTTAGTGAAGGCAATTAGTATGTTGTATAAGACCACGCTG | + |
|
Preference number: 5 (lower is better) Translates to: AHPAKMSTASMSSNL*ILVKAISMLYKTTL Trigger: CAGCGTGGTCTTATACAACATACTAATTGCCTTCACTAAGATGCACAAATTTGAGGACATAGAAGCGGTGGACATTTTGGCTGGGTGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
||
| CDS-3UTR CAA 90 bp | CATGTAGTTCTGGATATATGCCACAGATCAGAGGGTTGTGATAGAAGGTTCCTACAGAATCTCTTTGGCTaGCTTCTCACTTGTTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: HVVLDICHRSEGCDRRFLQNLFG*LLTCLG Trigger: CCCCAAACAAGTGAGAAGCAAGCCAAAGAGATTCTG...TAGGAACCTTCTATCACAACCCTCTGATCTGTGGCATATATCCAGAACTACATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
||
| CDS-3UTR CAA 90 bp | ATTAAAGCCAAGGCATACAACTTGCAAGGTGACCAATATTTCAGGAGATCTTGTGAACTTATCTCTCACTaGGTAGTGACTCCACTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: IKAKAYNLQGDQYFRRSCELISH*VVTPLP Trigger: GGGCAGTGGAGTCACTACCAAGTGAGAGATAAGTTC...ACAAGATCTCCTGAAATATTGGTCACCTTGCAAGTTGTATGCCTTGGCTTTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
||
| CDS TCA 90 bp | GATGGAAACCTATCTTGGCAAGAGATGCGAGCAGTATCCAGAGGGTaGCTTCATAAGGGATTTGAACATAGTCATAATCCAGTTCAAAAA | + |
|
Preference number: 5 (lower is better) Translates to: DGNLSWQEMRAVSRG*LHKGFEHSHNPVQK Trigger: TTTTTGAACTGGATTATGACTATGTTCAAATCCCTTATGAAGTCACCCTCTGGATACTGCTCGCATCTCTTGCCAAGATAGGTTTCCATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
||
| CDS-3UTR CAA 90 bp | CTGCCGTTTCTAAGTGATTACAAATTGCATATCCATACAACTTATAGGAATTGCTGCTGGGCAGTGGGATaGGAGGACTCATTAACATAC | + |
|
Preference number: 5 (lower is better) Translates to: LPFLSDYKLHIHTTYRNCCWAVG*EDSLTY Trigger: GTATGTTAATGAGTCCTCCAATCCCACTGCCCAGCA...GCAATTCCTATAAGTTGTATGGATATGCAATTTGTAATCACTTAGAAACGGCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
||
| CDS GCA 90 bp | TCTCAATGGCCTGTTTCATCTCCAGCTTCTTATACAAAGAAACGATaGTTGATTTTGGCAGGTTCCTCCGGATTAGAATTTTCCGTAAAT | + |
|
Preference number: 5 (lower is better) Translates to: SQWPVSSPASYTKKR*LILAGSSGLEFSVN Trigger: ATTTACGGAAAATTCTAATCCGGAGGAACCTGCCAAAATCAAGCATCGTTTCTTTGTATAAGAAGCTGGAGATGAAACAGGCCATTGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
||
| CDS-3UTR CAA 90 bp | CATGTAGTTCTGGATATATGCCACAGATCAGAGGGTTGTGATAGAAGGTTCCTAGACTTCATAAGGGATTaGAACATAGTCATAATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: HVVLDICHRSEGCDRRFLDFIRD*NIVIIQ Trigger: CTGGATTATGACTATGTTCAAATCCCTTATGAAGTC...TAGGAACCTTCTATCACAACCCTCTGATCTGTGGCATATATCCAGAACTACATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
||
| CDS-3UTR CAA 90 bp | ATTAAAGCCAAGGCATACAACTTGCAAGGTGACCAATATTTCAGGAGATCTTGTTCTATGTCCTCAAATTaGTGCATCTTAGTGAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: IKAKAYNLQGDQYFRRSCSMSSN*CILVKA Trigger: TGCCTTCACTAAGATGCACAAATTTGAGGACATAGA...ACAAGATCTCCTGAAATATTGGTCACCTTGCAAGTTGTATGCCTTGGCTTTAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
||
| CDS-3UTR CAA 90 bp | CTGCCGTTTCTAAGTGATTACAAATTGCATATCCATACAACTTATAGGAATTGCCTATGGTCAAACTTCTaGAACTTATCTCTCACTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LPFLSDYKLHIHTTYRNCLWSNF*NLSLTW Trigger: CCAAGTGAGAGATAAGTTCAAGAAGTTTGACCATAG...GCAATTCCTATAAGTTGTATGGATATGCAATTTGTAATCACTTAGAAACGGCAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
||
| CDS CCA 72 bp | GGTGCTCTGTGCTGTGTCTGTGTTCAGCTGTCCATCTaGACAGGATTGCTGAGGTCTCCTCCTCCGTCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: GALCCVCVQLSI*TGLLRSPPPSA Trigger: AGCAGACGGAGGAGGAGACCTCAGCAATCCTGTCCAGATGGACAGCTGAACACAGACACAGCACAGAGCACC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS CAA 90 bp | GGTGCTCTGTGCTGTGTCTGTGTTCAGCTGTCCATCTGGACAGGATaGCTGAGGTCTCCTCCTCCGTCTGCTCTCCAGAGTCATACTCCT | + |
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Preference number: 6 (lower is better) Translates to: GALCCVCVQLSIWTG*LRSPPPSALQSHTP Trigger: AGGAGTATGACTCTGGAGAGCAGACGGAGGAGGAGACCTCAGCAATCCTGTCCAGATGGACAGCTGAACACAGACACAGCACAGAGCACC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS TCA 72 bp | CCCGCATGGACTCCACGTCTTCAGGAGAAAGCCGCTTaGTTCCCTGTATCCTCTCAGACTGATAGGGTGTGG | + |
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Preference number: 6 (lower is better) Translates to: PAWTPRLQEKAA*FPVSSQTDRVW Trigger: CCACACCCTATCAGTCTGAGAGGATACAGGGAATCAAGCGGCTTTCTCCTGAAGACGTGGAGTCCATGCGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS GCA 72 bp | TCTGAGCTAGAAGCAGCAAACCGAGCATCAGGTGCCTaGTGGGCAGTGGGATTGGAGGACTCATTAACATAC | + |
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Preference number: 6 (lower is better) Translates to: SELEAANRASGA*WAVGLEDSLTY Trigger: GTATGTTAATGAGTCCTCCAATCCCACTGCCCAGCAGGCACCTGATGCTCGGTTTGCTGCTTCTAGCTCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS GCA 72 bp | ATCAGTGCCATCATCATCTGTGGGTTCAGCAGCCCTTaGCTCTCTCCTTGCTGCCTGAGGATTGCTATAAGG | + |
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Preference number: 6 (lower is better) Translates to: ISAIIICGFSSP*LSPCCLRIAIR Trigger: CCTTATAGCAATCCTCAGGCAGCAAGGAGAGAGGCAAGGGCTGCTGAACCCACAGATGATGATGGCACTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS CCA 72 bp | GATTGCTATAAGGAAAGGAGAGATATCGAAAGTTCTTaGTGCCTGCCGGCTTTCCCCAGGGCAGACTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: DCYKERRDIESS*CLPAFPRADSG Trigger: GCCAGAGTCTGCCCTGGGGAAAGCCGGCAGGCACCAAGAACTTTCGATATCTCTCCTTTCCTTATAGCAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS CAA 90 bp | GGAATCCTGAATCAGTGCCATCATCATCTGTGGGTTCAGCAGCCCTaGCCTCTCTCCTTGCTGCCTGAGGATTGCTATAAGGAAAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: GILNQCHHHLWVQQP*PLSLLPEDCYKERR Trigger: TCTCCTTTCCTTATAGCAATCCTCAGGCAGCAAGGAGAGAGGCAAGGGCTGCTGAACCCACAGATGATGATGGCACTGATTCAGGATTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS CAA 72 bp | AATCAGTGCCATCATCATCTGTGGGTTCAGCAGCCCTaGCCTCTCTCCTTGCTGCCTGAGGATTGCTATAAG | + |
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Preference number: 6 (lower is better) Translates to: NQCHHHLWVQQP*PLSLLPEDCYK Trigger: CTTATAGCAATCCTCAGGCAGCAAGGAGAGAGGCAAGGGCTGCTGAACCCACAGATGATGATGGCACTGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS CAA 90 bp | CAGTGCCATCATCATCTGTGGGTTCAGCAGCCCTTGCCTCTCTCCTaGCTGCCTGAGGATTGCTATAAGGAAAGGAGAGATATCGAAAGT | + |
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Preference number: 6 (lower is better) Translates to: QCHHHLWVQQPLPLS*LPEDCYKERRDIES Trigger: ACTTTCGATATCTCTCCTTTCCTTATAGCAATCCTCAGGCAGCAAGGAGAGAGGCAAGGGCTGCTGAACCCACAGATGATGATGGCACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS TCA 72 bp | ATCCAGTTCAAAAACAGATATCCCTTCATCGGGGTCTaGGCTAGAAGCAGCAAACCGAGCATCAGGTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: IQFKNRYPFIGV*ARSSKPSIRCL Trigger: CAGGCACCTGATGCTCGGTTTGCTGCTTCTAGCTCAGACCCCGATGAAGGGATATCTGTTTTTGAACTGGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS GCA 72 bp | GGACAGAGGAAGCAAAAACGCAAGGGAGAAGCTTCCTaGTCCTCTCACACCGCTGTAGAATATTATGAACTG | + |
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Preference number: 6 (lower is better) Translates to: GQRKQKRKGEAS*SSHTAVEYYEL Trigger: CAGTTCATAATATTCTACAGCGGTGTGAGAGGAGCAGGAAGCTTCTCCCTTGCGTTTTTGCTTCCTCTGTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS CAA 72 bp | AGGATAGGGTTCTTTGTCGAACTTGGTACATGCTTCTaGTCAGAATGTCCCGCATGGACTCCACGTCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: RIGFFVELGTCF*SECPAWTPRLQ Trigger: CTGAAGACGTGGAGTCCATGCGGGACATTCTGACAAGAAGCATGTACCAAGTTCGACAAAGAACCCTATCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS CAA 90 bp | ATTTGTTGTAGGATAGGGTTCTTTGTCGAACTTGGTACATGCTTCTaGTCAGAATGTCCCGCATGGACTCCACGTCTTCAGGAGAAAGCC | + |
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Preference number: 6 (lower is better) Translates to: ICCRIGFFVELGTCF*SECPAWTPRLQEKA Trigger: GGCTTTCTCCTGAAGACGTGGAGTCCATGCGGGACATTCTGACAAGAAGCATGTACCAAGTTCGACAAAGAACCCTATCCTACAACAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS GCA 72 bp | CCTGTGGTAAAGATGGAAACCTATCTTGGCAAGAGATaGGAGCAGTATCCAGAGGGTGACTTCATAAGGGAT | + |
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Preference number: 6 (lower is better) Translates to: PVVKMETYLGKR*EQYPEGDFIRD Trigger: ATCCCTTATGAAGTCACCCTCTGGATACTGCTCGCATCTCTTGCCAAGATAGGTTTCCATCTTTACCACAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS GCA 72 bp | CTGGTTACTGACATAGAAGAGGGTAAATACGCTGATTaGTCTCCAGATCTGGCAGAAGAGCAGAGTGAAGCA | + |
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Preference number: 6 (lower is better) Translates to: LVTDIEEGKYAD*SPDLAEEQSEA Trigger: TGCTTCACTCTGCTCTTCTGCCAGATCTGGAGAGCAATCAGCGTATTTACCCTCTTCTATGTCAGTAACCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS GCA 72 bp | TGTTGTAGGATAGGGTTCTTTGTCGAACTTGGTACATaGTTCTTGTCAGAATGTCCCGCATGGACTCCACGT | + |
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Preference number: 6 (lower is better) Translates to: CCRIGFFVELGT*FLSECPAWTPR Trigger: ACGTGGAGTCCATGCGGGACATTCTGACAAGAAGCATGTACCAAGTTCGACAAAGAACCCTATCCTACAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS CAA 90 bp | CTGGCACACCCAGCCAAAATGTCCACCGCTTCTATGTCCTCAAATTaGTGCATCTTAGTGAAGGCAATTAGTATGTTGTATAAGACCACG | + |
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Preference number: 6 (lower is better) Translates to: LAHPAKMSTASMSSN*CILVKAISMLYKTT Trigger: CGTGGTCTTATACAACATACTAATTGCCTTCACTAAGATGCACAAATTTGAGGACATAGAAGCGGTGGACATTTTGGCTGGGTGTGCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS TCA 72 bp | ATGAAGACGATGAGGGGCTCAATCGCAGAGATGTTCTaGGTGAAACGTGTGATAAATGCGGAAATGAATCCA | + |
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Preference number: 6 (lower is better) Translates to: MKTMRGSIAEMF*VKRVINAEMNP Trigger: TGGATTCATTTCCGCATTTATCACACGTTTCACTCAGAACATCTCTGCGATTGAGCCCCTCATCGTCTTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS TCA 72 bp | CTATCTTGGCAAGAGATGCGAGCAGTATCCAGAGGGTaGCTTCATAAGGGATTTGAACATAGTCATAATCCA | + |
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Preference number: 6 (lower is better) Translates to: LSWQEMRAVSRG*LHKGFEHSHNP Trigger: TGGATTATGACTATGTTCAAATCCCTTATGAAGTCACCCTCTGGATACTGCTCGCATCTCTTGCCAAGATAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS CAA 90 bp | GGCAAGAGATGCGAGCAGTATCCAGAGGGTGACTTCATAAGGGATTaGAACATAGTCATAATCCAGTTCAAAAACAGATATCCCTTCATC | + |
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Preference number: 6 (lower is better) Translates to: GKRCEQYPEGDFIRD*NIVIIQFKNRYPFI Trigger: GATGAAGGGATATCTGTTTTTGAACTGGATTATGACTATGTTCAAATCCCTTATGAAGTCACCCTCTGGATACTGCTCGCATCTCTTGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS CAA 90 bp | CAATGGCCTGTTTCATCTCCAGCTTCTTATACAAAGAAACGATGCTaGATTTTGGCAGGTTCCTCCGGATTAGAATTTTCCGTAAATATC | + |
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Preference number: 6 (lower is better) Translates to: QWPVSSPASYTKKRC*ILAGSSGLEFSVNI Trigger: GATATTTACGGAAAATTCTAATCCGGAGGAACCTGCCAAAATCAAGCATCGTTTCTTTGTATAAGAAGCTGGAGATGAAACAGGCCATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS GCA 72 bp | CCTGTTTCATCTCCAGCTTCTTATACAAAGAAACGATaGTTGATTTTGGCAGGTTCCTCCGGATTAGAATTT | + |
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Preference number: 6 (lower is better) Translates to: PVSSPASYTKKR*LILAGSSGLEF Trigger: AAATTCTAATCCGGAGGAACCTGCCAAAATCAAGCATCGTTTCTTTGTATAAGAAGCTGGAGATGAAACAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS CAA 72 bp | GTTTCATCTCCAGCTTCTTATACAAAGAAACGATGCTaGATTTTGGCAGGTTCCTCCGGATTAGAATTTTCC | + |
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Preference number: 6 (lower is better) Translates to: VSSPASYTKKRC*ILAGSSGLEFS Trigger: GGAAAATTCTAATCCGGAGGAACCTGCCAAAATCAAGCATCGTTTCTTTGTATAAGAAGCTGGAGATGAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS CAA 90 bp | CCTGTTTCATCTCCAGCTTCTTATACAAAGAAACGATGCTTGATTTaGGCAGGTTCCTCCGGATTAGAATTTTCCGTAAATATCTATGGT | + |
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Preference number: 6 (lower is better) Translates to: PVSSPASYTKKRCLI*AGSSGLEFSVNIYG Trigger: ACCATAGATATTTACGGAAAATTCTAATCCGGAGGAACCTGCCAAAATCAAGCATCGTTTCTTTGTATAAGAAGCTGGAGATGAAACAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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| CDS GCA 72 bp | AATCGCAGAGATGTTCTGAGTGAAACGTGTGATAAATaGGGAAATGAATCCAAATATGATGCCGAAAAATAC | + |
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Preference number: 6 (lower is better) Translates to: NRRDVLSETCDK*GNESKYDAEKY Trigger: GTATTTTTCGGCATCATATTTGGATTCATTTCCGCATTTATCACACGTTTCACTCAGAACATCTCTGCGATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027233.9 |
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