Pregenerated sensors for SLC9A3R1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020733Ensembl transcript IDs: ENSMUST00000021077.4
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTAGACAGTCCCTGGTCAACCTTGGACTTGGTCATCACACGTAGTTaGGGGAAGACTTCTTGTCTGGTCCAAAGGTCCTTGTTTAGTGCG | + |
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Preference number: 1 (lower is better) Translates to: VDSPWSTLDLVITRS*GKTSCLVQRSLFSA Trigger: CGCACTAAACAAGGACCTTTGGACCAGACAAGAAGTCTTCCCTCAACTACGTGTGATGACCAAGTCCAAGGTTGACCAGGGACTGTCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| 3UTR CAA 90 bp | CCAAGATGCCAAGCCAAAGCTCCGAGGACCTGGGCACCCTGTCCATaGTGCACAGTGGCTGTGGCTGCTGTAGACAGTCCCTGGTCAACC | + |
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Preference number: 2 (lower is better) Translates to: PRCQAKAPRTWAPCP*CTVAVAAVDSPWST Trigger: GGTTGACCAGGGACTGTCTACAGCAGCCACAGCCACTGTGCACAATGGACAGGGTGCCCAGGTCCTCGGAGCTTTGGCTTGGCATCTTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| 3UTR-3UTR GCA 90 bp | TTGCCATGCCCTGGGTACAACGACCAGGAAAATCACAAGAATCATGAAAACGAGCACAGTGGCTGTGGCTaGTGTAGACAGTCCCTGGTC | + |
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Preference number: 2 (lower is better) Translates to: LPCPGYNDQENHKNHENEHSGCG*CRQSLV Trigger: GACCAGGGACTGTCTACAGCAGCCACAGCCACTGTG...CTCGTTTTCATGATTCTTGTGATTTTCCTGGTCGTTGTACCCAGGGCATGGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| 3UTR-3UTR GCA 90 bp | CATGCCCTGGGTACAACGACCAGGAAAATCACAAGAATCATGAAAACGAGAACTGCACCCTGTCCATTGTaGACAGTGGCTGTGGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: HALGTTTRKITRIMKTRTAPCPL*TVAVAA Trigger: AGCAGCCACAGCCACTGTGCACAATGGACAGGGTGC...AGTTCTCGTTTTCATGATTCTTGTGATTTTCCTGGTCGTTGTACCCAGGGCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| 3UTR-3UTR GCA 90 bp | TTTAAGGATGAGGCCATTGCCATGCCCTGGGTACAACGACCAGGAAAATCACAACAAATGAACCCAAGATaGCAAGCCAAAGCTCCGAGG | + |
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Preference number: 2 (lower is better) Translates to: FKDEAIAMPWVQRPGKSQQMNPR*QAKAPR Trigger: CCTCGGAGCTTTGGCTTGGCATCTTGGGTTCATTTG...TTGTGATTTTCCTGGTCGTTGTACCCAGGGCATGGCAATGGCCTCATCCTTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| 3UTR-3UTR TCA 90 bp | ATGAGGCCATTGCCATGCCCTGGGTACAACGACCAGGAAAATCACAAGAATCATTCTCCTTCCCTAAGGTaGGGGAAGAACAGGATTCTA | + |
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Preference number: 2 (lower is better) Translates to: MRPLPCPGYNDQENHKNHSPSLR*GKNRIL Trigger: TAGAATCCTGTTCTTCCCTCACCTTAGGGAAGGAGA...ATGATTCTTGTGATTTTCCTGGTCGTTGTACCCAGGGCATGGCAATGGCCTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| 3UTR CAA 90 bp | GTCTCTCAGGGTGAGAGTAGAAATAACATTTTAAGGATGAGGCCATaGCCATGCCCTGGGTACAACGACCAGGAAAATCACAAGAATCAT | + |
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Preference number: 2 (lower is better) Translates to: VSQGESRNNILRMRP*PCPGYNDQENHKNH Trigger: ATGATTCTTGTGATTTTCCTGGTCGTTGTACCCAGGGCATGGCAATGGCCTCATCCTTAAAATGTTATTTCTACTCTCACCCTGAGAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| 3UTR GCA 72 bp | GCCAAAGCTCCGAGGACCTGGGCACCCTGTCCATTGTaGACAGTGGCTGTGGCTGCTGTAGACAGTCCCTGG | + |
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Preference number: 3 (lower is better) Translates to: AKAPRTWAPCPL*TVAVAAVDSPW Trigger: CCAGGGACTGTCTACAGCAGCCACAGCCACTGTGCACAATGGACAGGGTGCCCAGGTCCTCGGAGCTTTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| 3UTR GCA 72 bp | CTGGGCACCCTGTCCATTGTGCACAGTGGCTGTGGCTaGTGTAGACAGTCCCTGGTCAACCTTGGACTTGGT | + |
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Preference number: 3 (lower is better) Translates to: LGTLSIVHSGCG*CRQSLVNLGLG Trigger: ACCAAGTCCAAGGTTGACCAGGGACTGTCTACAGCAGCCACAGCCACTGTGCACAATGGACAGGGTGCCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| 3UTR-3UTR CAA 90 bp | GACCTGGGCACCCTGTCCATTGTGCACAGTGGCTGTGGCTGCTGTAGACAGTCCTTGAGGGAAGACTTCTaGTCTGGTCCAAAGGTCCTT | + |
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Preference number: 3 (lower is better) Translates to: DLGTLSIVHSGCGCCRQSLREDF*SGPKVL Trigger: AAGGACCTTTGGACCAGACAAGAAGTCTTCCCTCAA...GGACTGTCTACAGCAGCCACAGCCACTGTGCACAATGGACAGGGTGCCCAGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| 3UTR TCA 72 bp | ATTTGTCAGGAAGTGGGGTGGGTGCTGATGCTGATCTaGATGTTGATTGGTGGGCACCTGGGGAGAAGGGAA | + |
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Preference number: 3 (lower is better) Translates to: ICQEVGWVLMLI*MLIGGHLGRRE Trigger: TTCCCTTCTCCCCAGGTGCCCACCAATCAACATTCAGATCAGCATCAGCACCCACCCCACTTCCTGACAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| 3UTR TCA 72 bp | CCCTGGTCAACCTTGGACTTGGTCATCACACGTAGTTaGGGGAAGACTTCTTGTCTGGTCCAAAGGTCCTTG | + |
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Preference number: 3 (lower is better) Translates to: PWSTLDLVITRS*GKTSCLVQRSL Trigger: CAAGGACCTTTGGACCAGACAAGAAGTCTTCCCTCAACTACGTGTGATGACCAAGTCCAAGGTTGACCAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| 3UTR-3UTR CAA 90 bp | GTCCCTGGTCAACCTTGGACTTGGTCATCACACGTAGTTGAGGGAAGACTTCTTCTAGAAAAATCAGATTaGTCAGGAAGTGGGGTGGGT | + |
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Preference number: 3 (lower is better) Translates to: VPGQPWTWSSHVVEGRLLLEKSD*SGSGVG Trigger: ACCCACCCCACTTCCTGACAAATCTGATTTTTCTAG...AAGAAGTCTTCCCTCAACTACGTGTGATGACCAAGTCCAAGGTTGACCAGGGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| 3UTR GCA 72 bp | AGTAGAAATAACATTTTAAGGATGAGGCCATTGCCATaGCCTGGGTACAACGACCAGGAAAATCACAAGAAT | + |
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Preference number: 3 (lower is better) Translates to: SRNNILRMRPLP*PGYNDQENHKN Trigger: ATTCTTGTGATTTTCCTGGTCGTTGTACCCAGGGCATGGCAATGGCCTCATCCTTAAAATGTTATTTCTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| 3UTR CAA 72 bp | CAAGCCAAAGCTCCGAGGACCTGGGCACCCTGTCCATaGTGCACAGTGGCTGTGGCTGCTGTAGACAGTCCC | + |
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Preference number: 4 (lower is better) Translates to: QAKAPRTWAPCP*CTVAVAAVDSP Trigger: GGGACTGTCTACAGCAGCCACAGCCACTGTGCACAATGGACAGGGTGCCCAGGTCCTCGGAGCTTTGGCTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS-3UTR GCA 90 bp | CCCAAGATGCCAAGCCAAAGCTCCGAGGACCTGGGCACCCTGTCCATTGTGCACAAGGGGCCATCCAGGTaGTCCTGGGATGGGATCACT | + |
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Preference number: 4 (lower is better) Translates to: PKMPSQSSEDLGTLSIVHKGPSR*SWDGIT Trigger: AGTGATCCCATCCCAGGAGCACCTGGATGGCCCCTT...GTGCACAATGGACAGGGTGCCCAGGTCCTCGGAGCTTTGGCTTGGCATCTTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS-3UTR GCA 90 bp | AGACTGGTGAGGGGACACTTTGGTAGGAAGAAGCCCTCAGGGAAGTGTAGGGAGGACACCACGTCCCCGTaGTGCTTGCCCTCCATGCAG | + |
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Preference number: 4 (lower is better) Translates to: RLVRGHFGRKKPSGKCREDTTSP*CLPSMQ Trigger: CTGCATGGAGGGCAAGCAGCACGGGGACGTGGTGTC...CTCCCTACACTTCCCTGAGGGCTTCTTCCTACCAAAGTGTCCCCTCACCAGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS-3UTR CCA 90 bp | GACCTGGGCACCCTGTCCATTGTGCACAGTGGCTGTGGCTGCTGTAGACAGTCCTCGGATGAACTGGCCTaGCTTAGACTTGTCGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: DLGTLSIVHSGCGCCRQSSDELA*LRLVAV Trigger: CACAGCGACAAGTCTAAGCCAGGCCAGTTCATCCGA...GGACTGTCTACAGCAGCCACAGCCACTGTGCACAATGGACAGGGTGCCCAGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS-3UTR CCA 90 bp | GGCTGTGGCTGCTGTAGACAGTCCCTGGTCAACCTTGGACTTGGTCATCACACGCTACCACCAGCAGCTTaGCCTCATCACCTCCACCCT | + |
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Preference number: 4 (lower is better) Translates to: GCGCCRQSLVNLGLGHHTLPPAA*PHHLHP Trigger: AGGGTGGAGGTGATGAGGCCAAGCTGCTGGTGGTAG...CGTGTGATGACCAAGTCCAAGGTTGACCAGGGACTGTCTACAGCAGCCACAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS-3UTR CCA 90 bp | GGCTGTGGCTGCTGTAGACAGTCCCTGGTCAACCTTGGACTTGGTCATCACACGGAAGCCGTAGCCATTTaGACCCTTCTCCAGGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: GCGCCRQSLVNLGLGHHTEAVAI*TLLQAA Trigger: TGCTGCCTGGAGAAGGGTCCAAATGGCTACGGCTTC...CGTGTGATGACCAAGTCCAAGGTTGACCAGGGACTGTCTACAGCAGCCACAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS-3UTR CCA 90 bp | GACCTGGGCACCCTGTCCATTGTGCACAGTGGCTGTGGCTGCTGTAGACAGTCCCAGGTGCTCCTGGGATaGGATCACTTTGCACTTCTT | + |
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Preference number: 4 (lower is better) Translates to: DLGTLSIVHSGCGCCRQSQVLLG*DHFALL Trigger: AAGAAGTGCAAAGTGATCCCATCCCAGGAGCACCTG...GGACTGTCTACAGCAGCCACAGCCACTGTGCACAATGGACAGGGTGCCCAGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS-3UTR TCA 90 bp | CATGCCCTGGGTACAACGACCAGGAAAATCACAAGAATCATGAAAACGAGAACTTGGCCTGGGGCTCTCTaGAGCTGGCTCCACCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: HALGTTTRKITRIMKTRTWPGAL*SWLHQG Trigger: GCCCTGGTGGAGCCAGCTTCAGAGAGCCCCAGGCCA...AGTTCTCGTTTTCATGATTCTTGTGATTTTCCTGGTCGTTGTACCCAGGGCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS-3UTR GCA 90 bp | TTTAAGGATGAGGCCATTGCCATGCCCTGGGTACAACGACCAGGAAAATCACAATCAGCGCTGCGCGGATaGGGCTCACCACCTGCTGAT | + |
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Preference number: 4 (lower is better) Translates to: FKDEAIAMPWVQRPGKSQSALRG*GSPPAD Trigger: ATCAGCAGGTGGTGAGCCGCATCCGCGCAGCGCTGA...TTGTGATTTTCCTGGTCGTTGTACCCAGGGCATGGCAATGGCCTCATCCTTAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS-3UTR GCA 90 bp | CTAGAAAAATCAGATTTGTCAGGAAGTGGGGTGGGTGCTGATGCTGATCTGAATCACGGCGTTCAGCGCTaGGCGGATGCGGCTCACCAC | + |
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Preference number: 4 (lower is better) Translates to: LEKSDLSGSGVGADADLNHGVQR*ADAAHH Trigger: GTGGTGAGCCGCATCCGCGCAGCGCTGAACGCCGTG...ATTCAGATCAGCATCAGCACCCACCCCACTTCCTGACAAATCTGATTTTTCTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS-3UTR CCA 90 bp | AAGACTTCTTGTCTGGTCCAAAGGTCCTTGTTTAGTGCGGGTTCCAGTGATGCTTTGCCAGGGCTGGCCTaGGGCTCTCTGAAGCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: KTSCLVQRSLFSAGSSDALPGLA*GSLKLA Trigger: AGCCAGCTTCAGAGAGCCCCAGGCCAGCCCTGGCAA...AGCATCACTGGAACCCGCACTAAACAAGGACCTTTGGACCAGACAAGAAGTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS-3UTR CCA 90 bp | GGCTGTGGCTGCTGTAGACAGTCCCTGGTCAACCTTGGACTTGGTCATCACACGCTCTTGGGGCTGTCTTaGGAATTTAGCTCCTCACTG | + |
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Preference number: 4 (lower is better) Translates to: GCGCCRQSLVNLGLGHHTLLGLS*EFSSSL Trigger: CAGTGAGGAGCTAAATTCCCAAGACAGCCCCAAGAG...CGTGTGATGACCAAGTCCAAGGTTGACCAGGGACTGTCTACAGCAGCCACAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS-3UTR GCA 90 bp | TGCCATGCCCTGGGTACAACGACCAGGAAAATCACAAGAATCATGAAAACGAGAGGCCTTTCTTCATGGTaGAGAGCCGGGGCCGGAGCT | + |
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Preference number: 4 (lower is better) Translates to: CHALGTTTRKITRIMKTRGLSSW*RAGAGA Trigger: AGCTCCGGCCCCGGCTCTGCACCATGAAGAAAGGCC...TCTCGTTTTCATGATTCTTGTGATTTTCCTGGTCGTTGTACCCAGGGCATGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS-3UTR GCA 90 bp | TTTAAGGATGAGGCCATTGCCATGCCCTGGGTACAACGACCAGGAAAATCACAACGTCCCCGTGCTGCTTaGCCTCCATGCAGACACCAT | + |
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Preference number: 4 (lower is better) Translates to: FKDEAIAMPWVQRPGKSQRPRAA*PPCRHH Trigger: ATGGTGTCTGCATGGAGGGCAAGCAGCACGGGGACG...TTGTGATTTTCCTGGTCGTTGTACCCAGGGCATGGCAATGGCCTCATCCTTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS-3UTR GCA 90 bp | ATGAGGCCATTGCCATGCCCTGGGTACAACGACCAGGAAAATCACAAGAATCATACCACGTCCCCGTGCTaGTTGCCCTCCATGCAGACA | + |
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Preference number: 4 (lower is better) Translates to: MRPLPCPGYNDQENHKNHTTSPC*LPSMQT Trigger: TGTCTGCATGGAGGGCAAGCAGCACGGGGACGTGGT...ATGATTCTTGTGATTTTCCTGGTCGTTGTACCCAGGGCATGGCAATGGCCTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS-3UTR TCA 90 bp | TTGCCATGCCCTGGGTACAACGACCAGGAAAATCACAAGAATCATGAAAACGAGCGGCTCACCACCTGCTaGTGCGTCTCCTTCTCCACA | + |
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Preference number: 4 (lower is better) Translates to: LPCPGYNDQENHKNHENERLTTC*CVSFST Trigger: TGTGGAGAAGGAGACGCATCAGCAGGTGGTGAGCCG...CTCGTTTTCATGATTCTTGTGATTTTCCTGGTCGTTGTACCCAGGGCATGGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS-3UTR TCA 90 bp | CATGCCCTGGGTACAACGACCAGGAAAATCACAAGAATCATGAAAACGAGAACTAGACGCCCAGCTTCTTaGGACGCTCGTCGGTCTCCG | + |
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Preference number: 4 (lower is better) Translates to: HALGTTTRKITRIMKTRTRRPAS*DARRSP Trigger: CGGAGACCGACGAGCGTCTCAAGAAGCTGGGCGTCT...AGTTCTCGTTTTCATGATTCTTGTGATTTTCCTGGTCGTTGTACCCAGGGCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS-3UTR TCA 90 bp | CATGCCCTGGGTACAACGACCAGGAAAATCACAAGAATCATGAAAACGAGAACTCATCACCTCCACCCTTaGTGGCGGACACCACGTCCC | + |
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Preference number: 4 (lower is better) Translates to: HALGTTTRKITRIMKTRTHHLHP*WRTPRP Trigger: GGGACGTGGTGTCCGCCATCAAGGGTGGAGGTGATG...AGTTCTCGTTTTCATGATTCTTGTGATTTTCCTGGTCGTTGTACCCAGGGCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS-3UTR TCA 90 bp | TTTAAGGATGAGGCCATTGCCATGCCCTGGGTACAACGACCAGGAAAATCACAAGTATCTCTCCATTGCTaGAGGGCTCAGGCAAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: FKDEAIAMPWVQRPGKSQVSLHC*RAQARG Trigger: GCCCCTTGCCTGAGCCCTTCAGCAATGGAGAGATAC...TTGTGATTTTCCTGGTCGTTGTACCCAGGGCATGGCAATGGCCTCATCCTTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS-3UTR TCA 90 bp | GTCCCTGGTCAACCTTGGACTTGGTCATCACACGTAGTTGAGGGAAGACTTCTTCAGCCAAGGAGATGTTaGGGTCCAAGATGGGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: VPGQPWTWSSHVVEGRLLQPRRC*GPRWGQ Trigger: CTGACCCCATCTTGGACCTCAACATCTCCTTGGCTG...AAGAAGTCTTCCCTCAACTACGTGTGATGACCAAGTCCAAGGTTGACCAGGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS-3UTR GCA 90 bp | GAGAGTAGAAATAACATTTTAAGGATGAGGCCATTGCCATGCCCTGGGTACAACTCTGCGGGGCCCTCTTaGTACTGCGCTTCTGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: ESRNNILRMRPLPCPGYNSAGPS*YCASGG Trigger: CCCACCAGAAGCGCAGTAGCAAGAGGGCCCCGCAGA...GTTGTACCCAGGGCATGGCAATGGCCTCATCCTTAAAATGTTATTTCTACTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS-3UTR CCA 90 bp | TTTAAGGATGAGGCCATTGCCATGCCCTGGGTACAACGACCAGGAAAATCACAACCATCCAGGTGCTCCTaGGATGGGATCACTTTGCAC | + |
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Preference number: 4 (lower is better) Translates to: FKDEAIAMPWVQRPGKSQPSRCS*DGITLH Trigger: GTGCAAAGTGATCCCATCCCAGGAGCACCTGGATGG...TTGTGATTTTCCTGGTCGTTGTACCCAGGGCATGGCAATGGCCTCATCCTTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS-3UTR TCA 90 bp | GAGAGTAGAAATAACATTTTAAGGATGAGGCCATTGCCATGCCCTGGGTACAACTGTCGCTGTGCAGGTTaGAGCCATAGCCATTGGGGC | + |
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Preference number: 4 (lower is better) Translates to: ESRNNILRMRPLPCPGYNCRCAG*SHSHWG Trigger: GCCCCAATGGCTATGGCTTCAACCTGCACAGCGACA...GTTGTACCCAGGGCATGGCAATGGCCTCATCCTTAAAATGTTATTTCTACTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS-3UTR TCA 90 bp | ATGAGGCCATTGCCATGCCCTGGGTACAACGACCAGGAAAATCACAAGAATCATCCATGCAGACACCATTaGCCTCCACAATTCGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: MRPLPCPGYNDQENHKNHPCRHH*PPQFGP Trigger: AGGACCGAATTGTGGAGGTCAATGGTGTCTGCATGG...ATGATTCTTGTGATTTTCCTGGTCGTTGTACCCAGGGCATGGCAATGGCCTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS-3UTR CCA 90 bp | GAGAGTAGAAATAACATTTTAAGGATGAGGCCATTGCCATGCCCTGGGTACAACACCAGACGGATAAACTaGCCCACCTTGCCCTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: ESRNNILRMRPLPCPGYNTRRIN*PTLPFS Trigger: GGAGAAGGGCAAGGTGGGCCAGTTTATCCGTCTGGT...GTTGTACCCAGGGCATGGCAATGGCCTCATCCTTAAAATGTTATTTCTACTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS-3UTR CCA 90 bp | CATGCCCTGGGTACAACGACCAGGAAAATCACAAGAATCATGAAAACGAGAACTCTACTGCGCTTCTGGTaGGCCCTCTCTTTAGCCACA | + |
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Preference number: 4 (lower is better) Translates to: HALGTTTRKITRIMKTRTLLRFW*ALSLAT Trigger: TGTGGCTAAAGAGAGGGCCCACCAGAAGCGCAGTAG...AGTTCTCGTTTTCATGATTCTTGTGATTTTCCTGGTCGTTGTACCCAGGGCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS-3UTR CCA 90 bp | GTCTCTCAGGGTGAGAGTAGAAATAACATTTTAAGGATGAGGCCATTGCCATGCTTGCTACTGCGCTTCTaGTGGGCCCTCTCTTTAGCC | + |
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Preference number: 4 (lower is better) Translates to: VSQGESRNNILRMRPLPCLLLRF*WALSLA Trigger: GGCTAAAGAGAGGGCCCACCAGAAGCGCAGTAGCAA...GCATGGCAATGGCCTCATCCTTAAAATGTTATTTCTACTCTCACCCTGAGAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS-3UTR TCA 90 bp | CATGCCCTGGGTACAACGACCAGGAAAATCACAAGAATCATGAAAACGAGAACTTCACTTTGCACTTCTTaGAGAACTCATCTGTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: HALGTTTRKITRIMKTRTSLCTS*RTHLFP Trigger: AGGAAACAGATGAGTTCTTCAAGAAGTGCAAAGTGA...AGTTCTCGTTTTCATGATTCTTGTGATTTTCCTGGTCGTTGTACCCAGGGCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS TCA 90 bp | CCTGGGGGCGCAGCAGCTCTTCCCGGATCGAGACGCCCAGCTTCTTaGGACGCTCGTCGGTCTCCGGGTCGACCACCAGCAGGCGCACGG | + |
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Preference number: 5 (lower is better) Translates to: PGGAAALPGSRRPAS*DARRSPGRPPAGAR Trigger: CCGTGCGCCTGCTGGTGGTCGACCCGGAGACCGACGAGCGTCTCAAGAAGCTGGGCGTCTCGATCCGGGAAGAGCTGCTGCGCCCCCAGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS GCA 90 bp | GTCGGTCTCCGGGTCGACCACCAGCAGGCGCACGGCGTTCAGCGCTaGGCGGATGCGGCTCACCACCTGCTGATGCGTCTCCTTCTCCAC | + |
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Preference number: 5 (lower is better) Translates to: VGLRVDHQQAHGVQR*ADAAHHLLMRLLLH Trigger: GTGGAGAAGGAGACGCATCAGCAGGTGGTGAGCCGCATCCGCGCAGCGCTGAACGCCGTGCGCCTGCTGGTGGTCGACCCGGAGACCGAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS CCA 90 bp | TTCGGCCTCATTCTGGTCCCCAGCCTCATGAGTGTCGGCGGCCGCTaGAGGCTCGGCTTGTTCGGACTTCTCCTGGGGGCGCAGCAGCTC | + |
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Preference number: 5 (lower is better) Translates to: FGLILVPSLMSVGGR*RLGLFGLLLGAQQL Trigger: GAGCTGCTGCGCCCCCAGGAGAAGTCCGAACAAGCCGAGCCTCCAGCGGCCGCCGACACTCATGAGGCTGGGGACCAGAATGAGGCCGAA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS TCA 90 bp | TCGCGCAAGTGGCTCTTTTCGGCCTCATTCTGGTCCCCAGCCTCATaGGTGTCGGCGGCCGCTGGAGGCTCGGCTTGTTCGGACTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: SRKWLFSASFWSPAS*VSAAAGGSACSDFS Trigger: GGAGAAGTCCGAACAAGCCGAGCCTCCAGCGGCCGCCGACACTCATGAGGCTGGGGACCAGAATGAGGCCGAAAAGAGCCACTTGCGCGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS GCA 90 bp | GCCTCATCACCTCCACCCTTGATGGCGGACACCACGTCCCCGTGCTaGTTGCCCTCCATGCAGACACCATTGACCTCCACAATTCGGTCC | + |
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Preference number: 5 (lower is better) Translates to: ASSPPPLMADTTSPC*LPSMQTPLTSTIRS Trigger: GGACCGAATTGTGGAGGTCAATGGTGTCTGCATGGAGGGCAAGCAGCACGGGGACGTGGTGTCCGCCATCAAGGGTGGAGGTGATGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS TCA 90 bp | TTTCCTTGTCTACCACCAGCAGCTTGGCCTCATCACCTCCACCCTTaGTGGCGGACACCACGTCCCCGTGCTGCTTGCCCTCCATGCAGA | + |
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Preference number: 5 (lower is better) Translates to: FPCLPPAAWPHHLHP*WRTPRPRAACPPCR Trigger: TCTGCATGGAGGGCAAGCAGCACGGGGACGTGGTGTCCGCCATCAAGGGTGGAGGTGATGAGGCCAAGCTGCTGGTGGTAGACAAGGAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS GCA 90 bp | TTGGCCTCATCACCTCCACCCTTGATGGCGGACACCACGTCCCCGTaGTGCTTGCCCTCCATGCAGACACCATTGACCTCCACAATTCGG | + |
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Preference number: 5 (lower is better) Translates to: LASSPPPLMADTTSP*CLPSMQTPLTSTIR Trigger: CCGAATTGTGGAGGTCAATGGTGTCTGCATGGAGGGCAAGCAGCACGGGGACGTGGTGTCCGCCATCAAGGGTGGAGGTGATGAGGCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS CCA 90 bp | TTCTTGCTCCAGTCCATCTGCGGGGCCCTCTTGCTACTGCGCTTCTaGTGGGCCCTCTCTTTAGCCACAGCCAAGGAGATGTTGAGGTCC | + |
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Preference number: 5 (lower is better) Translates to: FLLQSICGALLLLRF*WALSLATAKEMLRS Trigger: GGACCTCAACATCTCCTTGGCTGTGGCTAAAGAGAGGGCCCACCAGAAGCGCAGTAGCAAGAGGGCCCCGCAGATGGACTGGAGCAAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS-3UTR CAA 90 bp | CCCAAGATGCCAAGCCAAAGCTCCGAGGACCTGGGCACCCTGTCCATTGTGCACTCCATGCAGACACCATaGACCTCCACAATTCGGTCC | + |
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Preference number: 5 (lower is better) Translates to: PKMPSQSSEDLGTLSIVHSMQTP*TSTIRS Trigger: GGACCGAATTGTGGAGGTCAATGGTGTCTGCATGGA...GTGCACAATGGACAGGGTGCCCAGGTCCTCGGAGCTTTGGCTTGGCATCTTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS-3UTR CAA 90 bp | AGACTGGTGAGGGGACACTTTGGTAGGAAGAAGCCCTCAGGGAAGTGTAGGGAGTCATCACCTCCACCCTaGATGGCGGACACCACGTCC | + |
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Preference number: 5 (lower is better) Translates to: RLVRGHFGRKKPSGKCRESSPPP*MADTTS Trigger: GGACGTGGTGTCCGCCATCAAGGGTGGAGGTGATGA...CTCCCTACACTTCCCTGAGGGCTTCTTCCTACCAAAGTGTCCCCTCACCAGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS-3UTR CAA 90 bp | CTAGAAAAATCAGATTTGTCAGGAAGTGGGGTGGGTGCTGATGCTGATCTGAATCGCTGGAGGCAGATCTaGCCAGGGCTGGCCTGGGGC | + |
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Preference number: 5 (lower is better) Translates to: LEKSDLSGSGVGADADLNRWRQI*PGLAWG Trigger: GCCCCAGGCCAGCCCTGGCAAGATCTGCCTCCAGCG...ATTCAGATCAGCATCAGCACCCACCCCACTTCCTGACAAATCTGATTTTTCTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS-3UTR CAA 90 bp | CCCAAGATGCCAAGCCAAAGCTCCGAGGACCTGGGCACCCTGTCCATTGTGCACAAGAGTTCATTTTTCTaGCTCCAGTCCATCTGCGGG | + |
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Preference number: 5 (lower is better) Translates to: PKMPSQSSEDLGTLSIVHKSSFF*LQSICG Trigger: CCCGCAGATGGACTGGAGCAAGAAAAATGAACTCTT...GTGCACAATGGACAGGGTGCCCAGGTCCTCGGAGCTTTGGCTTGGCATCTTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS CCA 90 bp | TCTCCATTGCTGAAGGGCTCAGGCAAGGGGCCATCCAGGTGCTCCTaGGATGGGATCACTTTGCACTTCTTGAAGAACTCATCTGTTTCC | + |
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Preference number: 5 (lower is better) Translates to: SPLLKGSGKGPSRCS*DGITLHFLKNSSVS Trigger: GGAAACAGATGAGTTCTTCAAGAAGTGCAAAGTGATCCCATCCCAGGAGCACCTGGATGGCCCCTTGCCTGAGCCCTTCAGCAATGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS-3UTR CAA 90 bp | TGCCATGCCCTGGGTACAACGACCAGGAAAATCACAAGAATCATGAAAACGAGAACGTCCCCGTGCTGCTaGCCCTCCATGCAGACACCA | + |
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Preference number: 5 (lower is better) Translates to: CHALGTTTRKITRIMKTRTSPCC*PSMQTP Trigger: TGGTGTCTGCATGGAGGGCAAGCAGCACGGGGACGT...TCTCGTTTTCATGATTCTTGTGATTTTCCTGGTCGTTGTACCCAGGGCATGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS GCA 90 bp | TGTATCTCTCCATTGCTGAAGGGCTCAGGCAAGGGGCCATCCAGGTaGTCCTGGGATGGGATCACTTTGCACTTCTTGAAGAACTCATCT | + |
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Preference number: 5 (lower is better) Translates to: CISPLLKGSGKGPSR*SWDGITLHFLKNSS Trigger: AGATGAGTTCTTCAAGAAGTGCAAAGTGATCCCATCCCAGGAGCACCTGGATGGCCCCTTGCCTGAGCCCTTCAGCAATGGAGAGATACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS CCA 90 bp | ATTGCTGAAGGGCTCAGGCAAGGGGCCATCCAGGTGCTCCTGGGATaGGATCACTTTGCACTTCTTGAAGAACTCATCTGTTTCCTTGTC | + |
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Preference number: 5 (lower is better) Translates to: IAEGLRQGAIQVLLG*DHFALLEELICFLV Trigger: GACAAGGAAACAGATGAGTTCTTCAAGAAGTGCAAAGTGATCCCATCCCAGGAGCACCTGGATGGCCCCTTGCCTGAGCCCTTCAGCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS-3UTR CAA 90 bp | GTCTCTCAGGGTGAGAGTAGAAATAACATTTTAAGGATGAGGCCATTGCCATGCGGAAGCCGTAGCCATTaGGACCCTTCTCCAGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: VSQGESRNNILRMRPLPCGSRSH*DPSPGS Trigger: GCTGCCTGGAGAAGGGTCCAAATGGCTACGGCTTCC...GCATGGCAATGGCCTCATCCTTAAAATGTTATTTCTACTCTCACCCTGAGAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS-3UTR CAA 90 bp | CATGCCCTGGGTACAACGACCAGGAAAATCACAAGAATCATGAAAACGAGAACTATAAACTGGCCCACCTaGCCCTTCTCCCCGTGCAGG | + |
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Preference number: 5 (lower is better) Translates to: HALGTTTRKITRIMKTRTINWPT*PFSPCR Trigger: CCTGCACGGGGAGAAGGGCAAGGTGGGCCAGTTTAT...AGTTCTCGTTTTCATGATTCTTGTGATTTTCCTGGTCGTTGTACCCAGGGCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS-3UTR CAA 90 bp | TGCCATGCCCTGGGTACAACGACCAGGAAAATCACAAGAATCATGAAAACGAGATGGCCTGGCTTAGACTaGTCGCTGTGCAGGTTGAAG | + |
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Preference number: 5 (lower is better) Translates to: CHALGTTTRKITRIMKTRWPGLD*SLCRLK Trigger: CTTCAACCTGCACAGCGACAAGTCTAAGCCAGGCCA...TCTCGTTTTCATGATTCTTGTGATTTTCCTGGTCGTTGTACCCAGGGCATGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS-3UTR CAA 90 bp | GTCTCTCAGGGTGAGAGTAGAAATAACATTTTAAGGATGAGGCCATTGCCATGCGGGCTCTGTGGAAACTaGTCTCTTGGGGCTGTCTTG | + |
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Preference number: 5 (lower is better) Translates to: VSQGESRNNILRMRPLPCGLCGN*SLGAVL Trigger: CAAGACAGCCCCAAGAGACAAGTTTCCACAGAGCCC...GCATGGCAATGGCCTCATCCTTAAAATGTTATTTCTACTCTCACCCTGAGAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS-3UTR CAA 90 bp | CATGCCCTGGGTACAACGACCAGGAAAATCACAAGAATCATGAAAACGAGAACTACAGCCAAGGAGATGTaGAGGTCCAAGATGGGGTCA | + |
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Preference number: 5 (lower is better) Translates to: HALGTTTRKITRIMKTRTTAKEM*RSKMGS Trigger: TGACCCCATCTTGGACCTCAACATCTCCTTGGCTGT...AGTTCTCGTTTTCATGATTCTTGTGATTTTCCTGGTCGTTGTACCCAGGGCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS-3UTR CAA 90 bp | GTCTCTCAGGGTGAGAGTAGAAATAACATTTTAAGGATGAGGCCATTGCCATGCTTCTGTATCTCTCCATaGCTGAAGGGCTCAGGCAAG | + |
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Preference number: 5 (lower is better) Translates to: VSQGESRNNILRMRPLPCFCISP*LKGSGK Trigger: CTTGCCTGAGCCCTTCAGCAATGGAGAGATACAGAA...GCATGGCAATGGCCTCATCCTTAAAATGTTATTTCTACTCTCACCCTGAGAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS GCA 72 bp | CGGGTCGACCACCAGCAGGCGCACGGCGTTCAGCGCTaGGCGGATGCGGCTCACCACCTGCTGATGCGTCTC | + |
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Preference number: 6 (lower is better) Translates to: RVDHQQAHGVQR*ADAAHHLLMRL Trigger: GAGACGCATCAGCAGGTGGTGAGCCGCATCCGCGCAGCGCTGAACGCCGTGCGCCTGCTGGTGGTCGACCCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS CCA 72 bp | GCGGCCGCTGGAGGCTCGGCTTGTTCGGACTTCTCCTaGGGGCGCAGCAGCTCTTCCCGGATCGAGACGCCC | + |
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Preference number: 6 (lower is better) Translates to: AAAGGSACSDFS*GRSSSSRIETP Trigger: GGGCGTCTCGATCCGGGAAGAGCTGCTGCGCCCCCAGGAGAAGTCCGAACAAGCCGAGCCTCCAGCGGCCGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS CAA 90 bp | TCCTGGGGGCGCAGCAGCTCTTCCCGGATCGAGACGCCCAGCTTCTaGAGACGCTCGTCGGTCTCCGGGTCGACCACCAGCAGGCGCACG | + |
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Preference number: 6 (lower is better) Translates to: SWGRSSSSRIETPSF*RRSSVSGSTTSRRT Trigger: CGTGCGCCTGCTGGTGGTCGACCCGGAGACCGACGAGCGTCTCAAGAAGCTGGGCGTCTCGATCCGGGAAGAGCTGCTGCGCCCCCAGGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS CAA 90 bp | CTGGTCCCCAGCCTCATGAGTGTCGGCGGCCGCTGGAGGCTCGGCTaGTTCGGACTTCTCCTGGGGGCGCAGCAGCTCTTCCCGGATCGA | + |
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Preference number: 6 (lower is better) Translates to: LVPSLMSVGGRWRLG*FGLLLGAQQLFPDR Trigger: TCGATCCGGGAAGAGCTGCTGCGCCCCCAGGAGAAGTCCGAACAAGCCGAGCCTCCAGCGGCCGCCGACACTCATGAGGCTGGGGACCAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS CAA 72 bp | CGCAGCAGCTCTTCCCGGATCGAGACGCCCAGCTTCTaGAGACGCTCGTCGGTCTCCGGGTCGACCACCAGC | + |
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Preference number: 6 (lower is better) Translates to: RSSSSRIETPSF*RRSSVSGSTTS Trigger: GCTGGTGGTCGACCCGGAGACCGACGAGCGTCTCAAGAAGCTGGGCGTCTCGATCCGGGAAGAGCTGCTGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS CAA 72 bp | AGCCTCATGAGTGTCGGCGGCCGCTGGAGGCTCGGCTaGTTCGGACTTCTCCTGGGGGCGCAGCAGCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: SLMSVGGRWRLG*FGLLLGAQQLF Trigger: GAAGAGCTGCTGCGCCCCCAGGAGAAGTCCGAACAAGCCGAGCCTCCAGCGGCCGCCGACACTCATGAGGCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS TCA 72 bp | GCAGCAGCTCTTCCCGGATCGAGACGCCCAGCTTCTTaGGACGCTCGTCGGTCTCCGGGTCGACCACCAGCA | + |
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Preference number: 6 (lower is better) Translates to: AAALPGSRRPAS*DARRSPGRPPA Trigger: TGCTGGTGGTCGACCCGGAGACCGACGAGCGTCTCAAGAAGCTGGGCGTCTCGATCCGGGAAGAGCTGCTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS TCA 72 bp | TGGCTCTTTTCGGCCTCATTCTGGTCCCCAGCCTCATaGGTGTCGGCGGCCGCTGGAGGCTCGGCTTGTTCG | + |
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Preference number: 6 (lower is better) Translates to: WLFSASFWSPAS*VSAAAGGSACS Trigger: CGAACAAGCCGAGCCTCCAGCGGCCGCCGACACTCATGAGGCTGGGGACCAGAATGAGGCCGAAAAGAGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS TCA 72 bp | CTACCACCAGCAGCTTGGCCTCATCACCTCCACCCTTaGTGGCGGACACCACGTCCCCGTGCTGCTTGCCCT | + |
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Preference number: 6 (lower is better) Translates to: LPPAAWPHHLHP*WRTPRPRAACP Trigger: AGGGCAAGCAGCACGGGGACGTGGTGTCCGCCATCAAGGGTGGAGGTGATGAGGCCAAGCTGCTGGTGGTAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS CAA 72 bp | TCTACCACCAGCAGCTTGGCCTCATCACCTCCACCCTaGATGGCGGACACCACGTCCCCGTGCTGCTTGCCC | + |
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Preference number: 6 (lower is better) Translates to: STTSSLASSPPP*MADTTSPCCLP Trigger: GGGCAAGCAGCACGGGGACGTGGTGTCCGCCATCAAGGGTGGAGGTGATGAGGCCAAGCTGCTGGTGGTAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS GCA 72 bp | CCTCCACCCTTGATGGCGGACACCACGTCCCCGTGCTaGTTGCCCTCCATGCAGACACCATTGACCTCCACA | + |
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Preference number: 6 (lower is better) Translates to: PPPLMADTTSPC*LPSMQTPLTST Trigger: TGTGGAGGTCAATGGTGTCTGCATGGAGGGCAAGCAGCACGGGGACGTGGTGTCCGCCATCAAGGGTGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS GCA 72 bp | TCACCTCCACCCTTGATGGCGGACACCACGTCCCCGTaGTGCTTGCCCTCCATGCAGACACCATTGACCTCC | + |
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Preference number: 6 (lower is better) Translates to: SPPPLMADTTSP*CLPSMQTPLTS Trigger: GGAGGTCAATGGTGTCTGCATGGAGGGCAAGCAGCACGGGGACGTGGTGTCCGCCATCAAGGGTGGAGGTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS CCA 72 bp | TCCATGCAGACACCATTGACCTCCACAATTCGGTCCTaGGCCCGGAGTCCAGACGCCTCCGCCGGTGAGTCT | + |
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Preference number: 6 (lower is better) Translates to: SMQTPLTSTIRS*ARSPDASAGES Trigger: AGACTCACCGGCGGAGGCGTCTGGACTCCGGGCCCAGGACCGAATTGTGGAGGTCAATGGTGTCTGCATGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS CAA 90 bp | GTTTCCTTGTCTACCACCAGCAGCTTGGCCTCATCACCTCCACCCTaGATGGCGGACACCACGTCCCCGTGCTGCTTGCCCTCCATGCAG | + |
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Preference number: 6 (lower is better) Translates to: VSLSTTSSLASSPPP*MADTTSPCCLPSMQ Trigger: CTGCATGGAGGGCAAGCAGCACGGGGACGTGGTGTCCGCCATCAAGGGTGGAGGTGATGAGGCCAAGCTGCTGGTGGTAGACAAGGAAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS CCA 72 bp | CAGTCCATCTGCGGGGCCCTCTTGCTACTGCGCTTCTaGTGGGCCCTCTCTTTAGCCACAGCCAAGGAGATG | + |
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Preference number: 6 (lower is better) Translates to: QSICGALLLLRF*WALSLATAKEM Trigger: CATCTCCTTGGCTGTGGCTAAAGAGAGGGCCCACCAGAAGCGCAGTAGCAAGAGGGCCCCGCAGATGGACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS CAA 90 bp | TCATCACCTCCACCCTTGATGGCGGACACCACGTCCCCGTGCTGCTaGCCCTCCATGCAGACACCATTGACCTCCACAATTCGGTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: SSPPPLMADTTSPCC*PSMQTPLTSTIRSW Trigger: CCAGGACCGAATTGTGGAGGTCAATGGTGTCTGCATGGAGGGCAAGCAGCACGGGGACGTGGTGTCCGCCATCAAGGGTGGAGGTGATGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS CAA 72 bp | CCACCCTTGATGGCGGACACCACGTCCCCGTGCTGCTaGCCCTCCATGCAGACACCATTGACCTCCACAATT | + |
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Preference number: 6 (lower is better) Translates to: PPLMADTTSPCC*PSMQTPLTSTI Trigger: AATTGTGGAGGTCAATGGTGTCTGCATGGAGGGCAAGCAGCACGGGGACGTGGTGTCCGCCATCAAGGGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS CCA 72 bp | GTCTCTTGGGGCTGTCTTGGGAATTTAGCTCCTCACTaGTATCGCTGGAGGCAGATCTTGCCAGGGCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: VSWGCLGNLAPH*YRWRQILPGLA Trigger: GGCCAGCCCTGGCAAGATCTGCCTCCAGCGATACCAGTGAGGAGCTAAATTCCCAAGACAGCCCCAAGAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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| CDS GCA 72 bp | CCATTGCTGAAGGGCTCAGGCAAGGGGCCATCCAGGTaGTCCTGGGATGGGATCACTTTGCACTTCTTGAAG | + |
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Preference number: 6 (lower is better) Translates to: PLLKGSGKGPSR*SWDGITLHFLK Trigger: CTTCAAGAAGTGCAAAGTGATCCCATCCCAGGAGCACCTGGATGGCCCCTTGCCTGAGCCCTTCAGCAATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021077.4 |
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