Pregenerated sensors for SLC9A2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026062Ensembl transcript IDs: ENSMUST00000027231.13, ENSMUST00000192345.2
Found 199 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AACCTCATTGTTTTAAAGTTGTACAGGGACTTCCCACCCACACTCTaGGAGTCACACCATTTCATGTGCCTACCCATTCCAACCTGTGCC | + |
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Preference number: 1 (lower is better) Translates to: NLIVLKLYRDFPPTL*ESHHFMCLPIPTCA Trigger: GGCACAGGTTGGAATGGGTAGGCACATGAAATGGTGTGACTCTCAGAGTGTGGGTGGGAAGTCCCTGTACAACTTTAAAACAATGAGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| 3UTR CCA 90 bp | AGGTGGAGAGTGCATGTTACTCCAAAGCCAGGAAAAACACAGAAATaGACCAAGAGCAGCCTGAACCTCATTGTTTTAAAGTTGTACAGG | + |
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Preference number: 1 (lower is better) Translates to: RWRVHVTPKPGKTQK*TKSSLNLIVLKLYR Trigger: CCTGTACAACTTTAAAACAATGAGGTTCAGGCTGCTCTTGGTCCATTTCTGTGTTTTTCCTGGCTTTGGAGTAACATGCACTCTCCACCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| 3UTR GCA 90 bp | ACCTCAAGAGTTAATTTTAGCACCTTTTCCATGCCAGCTCCACATTaGAGTAGCATAAATTTGGATAATAAATACTTTCATTTCGGTGTA | + |
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Preference number: 1 (lower is better) Translates to: TSRVNFSTFSMPAPH*SSINLDNKYFHFGV Trigger: TACACCGAAATGAAAGTATTTATTATCCAAATTTATGCTACTGCAATGTGGAGCTGGCATGGAAAAGGTGCTAAAATTAACTCTTGAGGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192345.2 |
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| 3UTR-3UTR TCA 90 bp | CGTGGCTCTTATGACGCTGAGTTCGGCTTCTTCCCTTTGCCCCTTTGCCCCACACGAACACTTTTTAACTaGGGTCCCACTTACAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: RGSYDAEFGFFPLPLCPTRTLFN*GPTYSR Trigger: CCTGCTGTAAGTGGGACCTCAGTTAAAAAGTGTTCG...TGTGGGGCAAAGGGGCAAAGGGAAGAAGCCGAACTCAGCGTCATAAGAGCCACG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000192345.2 |
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| 3UTR-3UTR TCA 90 bp | TTCATGTGCCTACCCATTCCAACCTGTGCCCTATTACTGTCAGTCAAAGCCTCTCCCACCTCTAGGAGTTaGCCCTCACCCCCTTGGAAA | + |
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Preference number: 2 (lower is better) Translates to: FMCLPIPTCALLLSVKASPTSRS*PSPPWK Trigger: TTTCCAAGGGGGTGAGGGTCAACTCCTAGAGGTGGG...AGAGGCTTTGACTGACAGTAATAGGGCACAGGTTGGAATGGGTAGGCACATGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| 3UTR-3UTR GCA 90 bp | TCGGCTTCTTCCCTTTGCCCCTTTGCCCCACAGACTCCATCTGCTTCTGACATGTTAGCACCTTTTCCATaGCAGCTCCACATTGCAGTA | + |
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Preference number: 2 (lower is better) Translates to: SASSLCPFAPQTPSASDMLAPFP*QLHIAV Trigger: TACTGCAATGTGGAGCTGGCATGGAAAAGGTGCTAA...CATGTCAGAAGCAGATGGAGTCTGTGGGGCAAAGGGGCAAAGGGAAGAAGCCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000192345.2 |
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| 3UTR-3UTR CCA 90 bp | AAGTCAAACCCAAAGACTCACCATTTCCTTCAACACTGGAAGGCGGTCTGTATAGGGGGTGTGGTGAGGTaGCAGGTGGAGAGTGCATGT | + |
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Preference number: 2 (lower is better) Translates to: KSNPKTHHFLQHWKAVCIGGVVR*QVESAC Trigger: ACATGCACTCTCCACCTGCCACCTCACCACACCCCC...TATACAGACCGCCTTCCAGTGTTGAAGGAAATGGTGAGTCTTTGGGTTTGACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| 3UTR-3UTR GCA 90 bp | GTGGTGAGGTGGCAGGTGGAGAGTGCATGTTACTCCAAAGCCAGGAAAAACACAACCCATTCCAACCTGTaGCCTATTACTGTCAGTCAA | + |
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Preference number: 2 (lower is better) Translates to: VVRWQVESACYSKARKNTTHSNL*PITVSQ Trigger: TTGACTGACAGTAATAGGGCACAGGTTGGAATGGGT...TGTGTTTTTCCTGGCTTTGGAGTAACATGCACTCTCCACCTGCCACCTCACCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| 3UTR-3UTR GCA 90 bp | CGTGGCTCTTATGACGCTGAGTTCGGCTTCTTCCCTTTGCCCCTTTGCCCCACATGGCCCAAGAAAGAATaGAACCATGATATAATGGTA | + |
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Preference number: 2 (lower is better) Translates to: RGSYDAEFGFFPLPLCPTWPKKE*NHDIMV Trigger: TACCATTATATCATGGTTGCATTCTTTCTTGGGCCA...TGTGGGGCAAAGGGGCAAAGGGAAGAAGCCGAACTCAGCGTCATAAGAGCCACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192345.2 |
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| 3UTR-3UTR CCA 90 bp | TTCATGTGCCTACCCATTCCAACCTGTGCCCTATTACTGTCAGTCAAAGCCTCTGGAAATGGTAGGATCTaGAACTTAGGACCCACCTCT | + |
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Preference number: 2 (lower is better) Translates to: FMCLPIPTCALLLSVKASGNGRI*NLGPTS Trigger: AGAGGTGGGTCCTAAGTTCCAGATCCTACCATTTCC...AGAGGCTTTGACTGACAGTAATAGGGCACAGGTTGGAATGGGTAGGCACATGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| 3UTR-3UTR CCA 90 bp | TGTTTTAAAGTTGTACAGGGACTTCCCACCCACACTCTGAGAGTCACACCATTTCCTCCTGGGAATCAGTaGCTTGACTCTACTTCCCAA | + |
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Preference number: 2 (lower is better) Translates to: CFKVVQGLPTHTLRVTPFPPGNQ*LDSTSQ Trigger: TTGGGAAGTAGAGTCAAGCCACTGATTCCCAGGAGG...AAATGGTGTGACTCTCAGAGTGTGGGTGGGAAGTCCCTGTACAACTTTAAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| 3UTR-3UTR TCA 90 bp | CCAACCTGTGCCCTATTACTGTCAGTCAAAGCCTCTTCTAGGGACAATGTTCTTTGGGAATCAGTGGCTTaGCTCTACTTCCCAAAGAAT | + |
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Preference number: 2 (lower is better) Translates to: PTCALLLSVKASSRDNVLWESVA*LYFPKN Trigger: ATTCTTTGGGAAGTAGAGTCAAGCCACTGATTCCCA...AAGAACATTGTCCCTAGAAGAGGCTTTGACTGACAGTAATAGGGCACAGGTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| 3UTR-3UTR TCA 90 bp | AAGTCAAACCCAAAGACTCACCATTTCCTTCAACACTGGAAGGCGGTCTGTATAAATGTTCTTCTTCACTaGGTCCTTCAGCTCAGCATG | + |
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Preference number: 2 (lower is better) Translates to: KSNPKTHHFLQHWKAVCINVLLH*VLQLSM Trigger: CATGCTGAGCTGAAGGACTCAGTGAAGAAGAACATT...TATACAGACCGCCTTCCAGTGTTGAAGGAAATGGTGAGTCTTTGGGTTTGACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| 3UTR-3UTR TCA 90 bp | GCTCTGAATGCACTACAGGACAATTTTATTAAAGCGGGTGATCCTGGATCCCTAATGGTAGATCAGGTTTaGGTAACAAGTCACAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: ALNALQDNFIKAGDPGSLMVDQV*VTSHSH Trigger: ATGGCTGTGACTTGTTACTCAAACCTGATCTACCAT...TAGGGATCCAGGATCACCCGCTTTAATAAAATTGTCCTGTAGTGCATTCAGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| 3UTR-3UTR TCA 90 bp | GATATAATGGTATCATTTGGGGAAAACACTCCATTGACTAGTTTCCTTCAGAGTAACGGGCAGTTTCCGTaGTGCAACCTTGCTGGAATA | + |
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Preference number: 2 (lower is better) Translates to: DIMVSFGENTPLTSFLQSNGQFP*CNLAGI Trigger: TATTCCAGCAAGGTTGCATCACGGAAACTGCCCGTT...ACTCTGAAGGAAACTAGTCAATGGAGTGTTTTCCCCAAATGATACCATTATATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192345.2 |
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| 3UTR-3UTR GCA 90 bp | AAGTCAAACCCAAAGACTCACCATTTCCTTCAACACTGGAAGGCGGTCTGTATAGCTTGCAGCTCTGAATaGACTACAGGACAATTTTAT | + |
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Preference number: 2 (lower is better) Translates to: KSNPKTHHFLQHWKAVCIACSSE*TTGQFY Trigger: ATAAAATTGTCCTGTAGTGCATTCAGAGCTGCAAGC...TATACAGACCGCCTTCCAGTGTTGAAGGAAATGGTGAGTCTTTGGGTTTGACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| 3UTR CCA 72 bp | AGAACACAACGGGCAGTTTCCGTGATGCAACCTTGCTaGAATATTTCGCAGCCTCCCTCAGGGAGCACGGGG | + |
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Preference number: 3 (lower is better) Translates to: RTQRAVSVMQPC*NISQPPSGSTG Trigger: CCCCGTGCTCCCTGAGGGAGGCTGCGAAATATTCCAGCAAGGTTGCATCACGGAAACTGCCCGTTGTGTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192345.2 |
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| 3UTR GCA 72 bp | GTGGCTCTTATGACGCTGAGTTCGGCTTCTTCCCTTTaGCCCTTTGCCCCACAGACTCCATCTGCTTCTGAC | + |
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Preference number: 3 (lower is better) Translates to: VALMTLSSASSL*PFAPQTPSASD Trigger: GTCAGAAGCAGATGGAGTCTGTGGGGCAAAGGGGCAAAGGGAAGAAGCCGAACTCAGCGTCATAAGAGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192345.2 |
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| 3UTR GCA 72 bp | TCTAGAACACAACGGGCAGTTTCCGTGATGCAACCTTaGTGGAATATTTCGCAGCCTCCCTCAGGGAGCACG | + |
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Preference number: 3 (lower is better) Translates to: SRTQRAVSVMQP*WNISQPPSGST Trigger: CGTGCTCCCTGAGGGAGGCTGCGAAATATTCCAGCAAGGTTGCATCACGGAAACTGCCCGTTGTGTTCTAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192345.2 |
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| 3UTR-3UTR CAA 90 bp | TCTTCCCTTTGCCCCTTTGCCCCACAGACTCCATCTGCTTCTGACATGAATGTGGGGGAAAACACTCCATaGACTAGTTTCCTTCAGAGT | + |
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Preference number: 3 (lower is better) Translates to: SSLCPFAPQTPSASDMNVGENTP*TSFLQS Trigger: ACTCTGAAGGAAACTAGTCAATGGAGTGTTTTCCCC...CACATTCATGTCAGAAGCAGATGGAGTCTGTGGGGCAAAGGGGCAAAGGGAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000192345.2 |
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| 3UTR TCA 72 bp | GTTTTAAAGTTGTACAGGGACTTCCCACCCACACTCTaGGAGTCACACCATTTCATGTGCCTACCCATTCCA | + |
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Preference number: 3 (lower is better) Translates to: VLKLYRDFPPTL*ESHHFMCLPIP Trigger: TGGAATGGGTAGGCACATGAAATGGTGTGACTCTCAGAGTGTGGGTGGGAAGTCCCTGTACAACTTTAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| 3UTR CCA 72 bp | CTCCCTCAGGGAGCACGGGGATCAGACTCAAGACGTTaGCATCTGATCCAGATCAACAATAAAATTCATGAT | + |
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Preference number: 3 (lower is better) Translates to: LPQGARGSDSRR*HLIQINNKIHD Trigger: ATCATGAATTTTATTGTTGATCTGGATCAGATGCCAACGTCTTGAGTCTGATCCCCGTGCTCCCTGAGGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192345.2 |
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| 3UTR TCA 72 bp | GTCAAAGCCTCTTCTAGGGACAATGTTCTTCTTCACTaGGTCCTTCAGCTCAGCATGGAAATGGTAGGATCT | + |
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Preference number: 3 (lower is better) Translates to: VKASSRDNVLLH*VLQLSMEMVGS Trigger: AGATCCTACCATTTCCATGCTGAGCTGAAGGACTCAGTGAAGAAGAACATTGTCCCTAGAAGAGGCTTTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| 3UTR GCA 72 bp | CACAAGAGGTCCTCACTGGTAGGACTTCTCAGAAGCTaGCACCAAGTCTTTAAACACTATGGGCTGATTTTT | + |
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Preference number: 3 (lower is better) Translates to: HKRSSLVGLLRS*HQVFKHYGLIF Trigger: AAAAATCAGCCCATAGTGTTTAAAGACTTGGTGGCAGCTTCTGAGAAGTCCTACCAGTGAGGACCTCTTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| 3UTR-3UTR CAA 90 bp | AAGTCAAACCCAAAGACTCACCATTTCCTTCAACACTGGAAGGCGGTCTGTATAGTCACAAAAGTCATTTaGTGGGACTTCCTCTTCTTG | + |
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Preference number: 3 (lower is better) Translates to: KSNPKTHHFLQHWKAVCIVTKVI*WDFLFL Trigger: CAAGAAGAGGAAGTCCCACAAAATGACTTTTGTGAC...TATACAGACCGCCTTCCAGTGTTGAAGGAAATGGTGAGTCTTTGGGTTTGACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| 3UTR CCA 72 bp | GGTAGGAGTTCTACTATTTACTGTGGTGTTTTTCGCTaGCCCAAGAAAGAATGCAACCATGATATAATGGTA | + |
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Preference number: 3 (lower is better) Translates to: GRSSTIYCGVFR*PKKECNHDIMV Trigger: TACCATTATATCATGGTTGCATTCTTTCTTGGGCCAGCGAAAAACACCACAGTAAATAGTAGAACTCCTACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192345.2 |
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| 3UTR GCA 72 bp | TCTTTTAAACAACTCAGTCAACTTAATATCTTAGAATaGTTAAGTTCAACGAAACAAAGCAATCAGGGGCTG | + |
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Preference number: 3 (lower is better) Translates to: SFKQLSQLNILE*LSSTKQSNQGL Trigger: CAGCCCCTGATTGCTTTGTTTCGTTGAACTTAAGCATTCTAAGATATTAAGTTGACTGAGTTGTTTAAAAGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192345.2 |
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| CDS-3UTR GCA 90 bp | GTGATGCAACCTTGCTGGAATATTTCGCAGCCTCCCTCAGGGAGCACGGGGATCGCCGGCACTGCCACCTaGAGAGACAGCAGCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: VMQPCWNISQPPSGSTGIAGTAT*RDSSSS Trigger: GCTGCTGCTGCTGTCTCTGCAGGTGGCAGTGCCGGC...GATCCCCGTGCTCCCTGAGGGAGGCTGCGAAATATTCCAGCAAGGTTGCATCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192345.2 |
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| CDS-3UTR GCA 90 bp | AGGAGGCATGTCCCCGAACACTTTTTAACTGAGGTCCCACTTACAGCAGGTCGGCGCGCCCGCCGGCACTaGCACCTGCAGAGACAGCAG | + |
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Preference number: 4 (lower is better) Translates to: RRHVPEHFLTEVPLTAGRRARRH*HLQRQQ Trigger: CTGCTGTCTCTGCAGGTGGCAGTGCCGGCGGGCGCG...CCGACCTGCTGTAAGTGGGACCTCAGTTAAAAAGTGTTCGGGGACATGCCTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000192345.2 |
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| CDS-3UTR CCA 90 bp | TATGACGCTGAGTTCGGCTTCTTCCCTTTGCCCCTTTGCCCCACAGACTCCATCCCGGGGCCACCACACTaGCAGGACTTGGCGGGTTGG | + |
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Preference number: 4 (lower is better) Translates to: YDAEFGFFPLPLCPTDSIPGPPH*QDLAGW Trigger: CCAACCCGCCAAGTCCTGCCAGTGTGGTGGCCCCGG...GATGGAGTCTGTGGGGCAAAGGGGCAAAGGGAAGAAGCCGAACTCAGCGTCATA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000192345.2 |
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| CDS-3UTR CCA 90 bp | TGTGGTGAGGTGGCAGGTGGAGAGTGCATGTTACTCCAAAGCCAGGAAAAACACTTGGCGGGTTGGAGCTaGCACCCCTGGCCCTGGGTG | + |
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Preference number: 4 (lower is better) Translates to: CGEVAGGECMLLQSQEKHLAGWS*HPWPWV Trigger: CACCCAGGGCCAGGGGTGCCAGCTCCAACCCGCCAA...GTGTTTTTCCTGGCTTTGGAGTAACATGCACTCTCCACCTGCCACCTCACCACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| CDS-3UTR TCA 90 bp | GTGATGCAACCTTGCTGGAATATTTCGCAGCCTCCCTCAGGGAGCACGGGGATCGAAGCCCGACCATTATaGGAAGGCAGCTCTCCGGCA | + |
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Preference number: 4 (lower is better) Translates to: VMQPCWNISQPPSGSTGIEARPL*EGSSPA Trigger: TGCCGGAGAGCTGCCTTCTCATAATGGTCGGGCTTC...GATCCCCGTGCTCCCTGAGGGAGGCTGCGAAATATTCCAGCAAGGTTGCATCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192345.2 |
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| CDS-3UTR GCA 90 bp | CCAACCTGTGCCCTATTACTGTCAGTCAAAGCCTCTTCTAGGGACAATGTTCTTCGCGCCCGCCGGCACTaGCACCTGCAGAGACAGCAG | + |
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Preference number: 4 (lower is better) Translates to: PTCALLLSVKASSRDNVLRARRH*HLQRQQ Trigger: CTGCTGTCTCTGCAGGTGGCAGTGCCGGCGGGCGCG...AAGAACATTGTCCCTAGAAGAGGCTTTGACTGACAGTAATAGGGCACAGGTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| CDS-3UTR TCA 90 bp | TGTGGTGAGGTGGCAGGTGGAGAGTGCATGTTACTCCAAAGCCAGGAAAAACACCACGGGGTCCACAGCTaGAATCAGGCTGCCGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: CGEVAGGECMLLQSQEKHHGVHS*NQAAEE Trigger: CTCTTCGGCAGCCTGATTTCAGCTGTGGACCCCGTG...GTGTTTTTCCTGGCTTTGGAGTAACATGCACTCTCCACCTGCCACCTCACCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| CDS-3UTR CCA 90 bp | CCAACCTGTGCCCTATTACTGTCAGTCAAAGCCTCTTCTAGGGACAATGTTCTTCCGGGGCCACCACACTaGCAGGACTTGGCGGGTTGG | + |
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Preference number: 4 (lower is better) Translates to: PTCALLLSVKASSRDNVLPGPPH*QDLAGW Trigger: CCAACCCGCCAAGTCCTGCCAGTGTGGTGGCCCCGG...AAGAACATTGTCCCTAGAAGAGGCTTTGACTGACAGTAATAGGGCACAGGTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| CDS-3UTR CCA 90 bp | AACCTTGCTGGAATATTTCGCAGCCTCCCTCAGGGAGCACGGGGATCAGACTCACCGAAGAGCAGGTTCTaGAGCAGGGTGATGTCACTG | + |
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Preference number: 4 (lower is better) Translates to: NLAGIFRSLPQGARGSDSPKSRF*SRVMSL Trigger: CAGTGACATCACCCTGCTCCAGAACCTGCTCTTCGG...TGAGTCTGATCCCCGTGCTCCCTGAGGGAGGCTGCGAAATATTCCAGCAAGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192345.2 |
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| CDS-3UTR CCA 90 bp | TGTGGTGAGGTGGCAGGTGGAGAGTGCATGTTACTCCAAAGCCAGGAAAAACACATCGGGAGGTTGAAGTaGAAGCCCTGCGCTCGCGGT | + |
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Preference number: 4 (lower is better) Translates to: CGEVAGGECMLLQSQEKHIGRLK*KPCARG Trigger: ACCGCGAGCGCAGGGCTTCCACTTCAACCTCCCGAT...GTGTTTTTCCTGGCTTTGGAGTAACATGCACTCTCCACCTGCCACCTCACCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| CDS-3UTR CCA 90 bp | CATGTGCCTACCCATTCCAACCTGTGCCCTATTACTGTCAGTCAAAGCCTCTTCCCCCGGCCAAACCGTTaGTCTTTGGAGAGCAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: HVPTHSNLCPITVSQSLFPRPNR*SLESRG Trigger: GCCCCTGCTCTCCAAAGACCAACGGTTTGGCCGGGG...GAAGAGGCTTTGACTGACAGTAATAGGGCACAGGTTGGAATGGGTAGGCACATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| CDS-3UTR CCA 90 bp | TGTGGTGAGGTGGCAGGTGGAGAGTGCATGTTACTCCAAAGCCAGGAAAAACACTCGCACCAACCTTGGTaGGGGCTTGGGTGGAACGTC | + |
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Preference number: 4 (lower is better) Translates to: CGEVAGGECMLLQSQEKHSHQPW*GLGWNV Trigger: GACGTTCCACCCAAGCCCCCACCAAGGTTGGTGCGA...GTGTTTTTCCTGGCTTTGGAGTAACATGCACTCTCCACCTGCCACCTCACCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| CDS-3UTR TCA 90 bp | TGTGGTGAGGTGGCAGGTGGAGAGTGCATGTTACTCCAAAGCCAGGAAAAACACGAAGCCCGACCATTATaGGAAGGCAGCTCTCCGGCA | + |
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Preference number: 4 (lower is better) Translates to: CGEVAGGECMLLQSQEKHEARPL*EGSSPA Trigger: TGCCGGAGAGCTGCCTTCTCATAATGGTCGGGCTTC...GTGTTTTTCCTGGCTTTGGAGTAACATGCACTCTCCACCTGCCACCTCACCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| CDS-3UTR GCA 90 bp | CCAACCTGTGCCCTATTACTGTCAGTCAAAGCCTCTTCTAGGGACAATGTTCTTGCCGGCACTGCCACCTaGAGAGACAGCAGCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: PTCALLLSVKASSRDNVLAGTAT*RDSSSS Trigger: GCTGCTGCTGCTGTCTCTGCAGGTGGCAGTGCCGGC...AAGAACATTGTCCCTAGAAGAGGCTTTGACTGACAGTAATAGGGCACAGGTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| CDS-3UTR GCA 90 bp | CATGTGCCTACCCATTCCAACCTGTGCCCTATTACTGTCAGTCAAAGCCTCTTCTTGGAGAGCAGGGGCTaGCTCAGCAACCCCGGTGTT | + |
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Preference number: 4 (lower is better) Translates to: HVPTHSNLCPITVSQSLFLESRG*LSNPGV Trigger: AACACCGGGGTTGCTGAGGCAGCCCCTGCTCTCCAA...GAAGAGGCTTTGACTGACAGTAATAGGGCACAGGTTGGAATGGGTAGGCACATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| CDS-3UTR CCA 90 bp | TATGACGCTGAGTTCGGCTTCTTCCCTTTGCCCCTTTGCCCCACAGACTCCATCCAGCATCCAGAACGATaGGTGGCAGGAGGTATAGGA | + |
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Preference number: 4 (lower is better) Translates to: YDAEFGFFPLPLCPTDSIQHPER*VAGGIG Trigger: TCCTATACCTCCTGCCACCCATCGTTCTGGATGCTG...GATGGAGTCTGTGGGGCAAAGGGGCAAAGGGAAGAAGCCGAACTCAGCGTCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192345.2 |
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| CDS-3UTR GCA 90 bp | GTGATGCAACCTTGCTGGAATATTTCGCAGCCTCCCTCAGGGAGCACGGGGATCTGGAATTCCACAGTGTaGCTACCACAGCATACCAGA | + |
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Preference number: 4 (lower is better) Translates to: VMQPCWNISQPPSGSTGIWNSTV*LPQHTR Trigger: TCTGGTATGCTGTGGTAGGCACACTGTGGAATTCCA...GATCCCCGTGCTCCCTGAGGGAGGCTGCGAAATATTCCAGCAAGGTTGCATCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192345.2 |
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| CDS-3UTR CCA 90 bp | TATGACGCTGAGTTCGGCTTCTTCCCTTTGCCCCTTTGCCCCACAGACTCCATCAAAGAAGGGGCGAGTTaGCATGAAGTAGCCAGCATC | + |
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Preference number: 4 (lower is better) Translates to: YDAEFGFFPLPLCPTDSIKEGAS*HEVASI Trigger: GATGCTGGCTACTTCATGCCAACTCGCCCCTTCTTT...GATGGAGTCTGTGGGGCAAAGGGGCAAAGGGAAGAAGCCGAACTCAGCGTCATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000192345.2 |
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| CDS-3UTR CCA 90 bp | TGTGGTGAGGTGGCAGGTGGAGAGTGCATGTTACTCCAAAGCCAGGAAAAACACCCGAAGAGCAGGTTCTaGAGCAGGGTGATGTCACTG | + |
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Preference number: 4 (lower is better) Translates to: CGEVAGGECMLLQSQEKHPKSRF*SRVMSL Trigger: CAGTGACATCACCCTGCTCCAGAACCTGCTCTTCGG...GTGTTTTTCCTGGCTTTGGAGTAACATGCACTCTCCACCTGCCACCTCACCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| CDS-3UTR TCA 90 bp | ATATTTCGCAGCCTCCCTCAGGGAGCACGGGGATCAGACTCAAGACGTTGGCATTCTGGCAGAAGGACTTaGACAAGTTGTACAGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: IFRSLPQGARGSDSRRWHSGRRT*TSCTGP Trigger: TGGTCCTGTACAACTTGTTCAAGTCCTTCTGCCAGA...ATGCCAACGTCTTGAGTCTGATCCCCGTGCTCCCTGAGGGAGGCTGCGAAATAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192345.2 |
||
| CDS-3UTR TCA 90 bp | TGTGGTGAGGTGGCAGGTGGAGAGTGCATGTTACTCCAAAGCCAGGAAAAACACTCTCTCCAGAAGTTGTaGCCCCAGTGTCCACACACA | + |
|
Preference number: 4 (lower is better) Translates to: CGEVAGGECMLLQSQEKHSLQKL*PQCPHT Trigger: TGTGTGTGGACACTGGGGTCACAACTTCTGGAGAGA...GTGTTTTTCCTGGCTTTGGAGTAACATGCACTCTCCACCTGCCACCTCACCACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS-3UTR TCA 90 bp | TCGGCTTCTTCCCTTTGCCCCTTTGCCCCACAGACTCCATCTGCTTCTGACATGGGAACATTTCAGCAGTaGTGTAGGACAAGTAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SASSLCPFAPQTPSASDMGTFQQ*CRTSSC Trigger: ACAGCTACTTGTCCTACATCACTGCTGAAATGTTCC...CATGTCAGAAGCAGATGGAGTCTGTGGGGCAAAGGGGCAAAGGGAAGAAGCCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192345.2 |
||
| CDS-3UTR TCA 90 bp | TGTGGTGAGGTGGCAGGTGGAGAGTGCATGTTACTCCAAAGCCAGGAAAAACACTCCTGGGCTGCAAATTaGGCACAGTGGTTCCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: CGEVAGGECMLLQSQEKHSWAAN*AQWFQH Trigger: ATGTTGGAACCACTGTGCTCAATTTGCAGCCCAGGA...GTGTTTTTCCTGGCTTTGGAGTAACATGCACTCTCCACCTGCCACCTCACCACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS-3UTR TCA 90 bp | TGTGGTGAGGTGGCAGGTGGAGAGTGCATGTTACTCCAAAGCCAGGAAAAACACGCTTTCTTTGAGAACTaGTCTGGCAAGAAGCGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CGEVAGGECMLLQSQEKHAFFEN*SGKKRL Trigger: CAGGCGCTTCTTGCCAGATCAGTTCTCAAAGAAAGC...GTGTTTTTCCTGGCTTTGGAGTAACATGCACTCTCCACCTGCCACCTCACCACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS-3UTR GCA 90 bp | GTGGTGAGGTGGCAGGTGGAGAGTGCATGTTACTCCAAAGCCAGGAAAAACACAACGGGTGGTAAACGCTaGTATGAATCCCAGGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VVRWQVESACYSKARKNTTGGKR*YESQED Trigger: ATCCTCCTGGGATTCATAGCAGCGTTTACCACCCGT...TGTGTTTTTCCTGGCTTTGGAGTAACATGCACTCTCCACCTGCCACCTCACCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS-3UTR GCA 90 bp | TTCATGTGCCTACCCATTCCAACCTGTGCCCTATTACTGTCAGTCAAAGCCTCTCTTTCCCGAAGACTGTaGCGCCTGCGAATCAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: FMCLPIPTCALLLSVKASLSRRL*RLRIRI Trigger: GATCCTGATTCGCAGGCGGCACAGTCTTCGGGAAAG...AGAGGCTTTGACTGACAGTAATAGGGCACAGGTTGGAATGGGTAGGCACATGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS-3UTR CCA 90 bp | CGTGGCTCTTATGACGCTGAGTTCGGCTTCTTCCCTTTGCCCCTTTGCCCCACACAGCATACCAGAAAATaGTGCCGAAGTTCTCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RGSYDAEFGFFPLPLCPTQHTRK*CRSSQR Trigger: TCTTTGAGAACTTCGGCACCATTTTCTGGTATGCTG...TGTGGGGCAAAGGGGCAAAGGGAAGAAGCCGAACTCAGCGTCATAAGAGCCACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000192345.2 |
||
| CDS-3UTR CCA 90 bp | GTGATGCAACCTTGCTGGAATATTTCGCAGCCTCCCTCAGGGAGCACGGGGATCATGATGCCTGAAAGGTaGAACATTTCAGCAGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: VMQPCWNISQPPSGSTGIMMPER*NISAVM Trigger: CATCACTGCTGAAATGTTCCACCTTTCAGGCATCAT...GATCCCCGTGCTCCCTGAGGGAGGCTGCGAAATATTCCAGCAAGGTTGCATCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192345.2 |
||
| CDS-3UTR CCA 90 bp | TTCATGTGCCTACCCATTCCAACCTGTGCCCTATTACTGTCAGTCAAAGCCTCTCAAACCGTTGGTCTTTaGAGAGCAGGGGCTGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FMCLPIPTCALLLSVKASQTVGL*RAGAAS Trigger: TGAGGCAGCCCCTGCTCTCCAAAGACCAACGGTTTG...AGAGGCTTTGACTGACAGTAATAGGGCACAGGTTGGAATGGGTAGGCACATGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS-3UTR TCA 90 bp | GCTCTGAATGCACTACAGGACAATTTTATTAAAGCGGGTGATCCTGGATCCCTAGGGGGTAATCCAGGGTaGACACGGGCAACCGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: ALNALQDNFIKAGDPGSLGGNPG*TRATDF Trigger: AAAGTCGGTTGCCCGTGTTCACCCTGGATTACCCCC...TAGGGATCCAGGATCACCCGCTTTAATAAAATTGTCCTGTAGTGCATTCAGAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS-3UTR TCA 90 bp | AACCTTGCTGGAATATTTCGCAGCCTCCCTCAGGGAGCACGGGGATCAGACTCAAGCTGTTCATTGACGTaGATGTTCTCAAAGACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NLAGIFRSLPQGARGSDSSCSLT*MFSKTA Trigger: TGCTGTCTTTGAGAACATTCACGTCAATGAACAGCT...TGAGTCTGATCCCCGTGCTCCCTGAGGGAGGCTGCGAAATATTCCAGCAAGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192345.2 |
||
| CDS-3UTR TCA 90 bp | TCTTCCCTTTGCCCCTTTGCCCCACAGACTCCATCTGCTTCTGACATGAATGTGTTACGCCATGATGCCTaGAAGGTGGAACATTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSLCPFAPQTPSASDMNVLRHDA*KVEHFS Trigger: GCTGAAATGTTCCACCTTTCAGGCATCATGGCGTAA...CACATTCATGTCAGAAGCAGATGGAGTCTGTGGGGCAAAGGGGCAAAGGGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192345.2 |
||
| CDS-3UTR GCA 90 bp | GTGGTGAGGTGGCAGGTGGAGAGTGCATGTTACTCCAAAGCCAGGAAAAACACACCTCAATCTGGCAGATaGCAAACAAAGACACCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: VVRWQVESACYSKARKNTPQSGR*QTKTPQ Trigger: TTGGGGTGTCTTTGTTTGGCATCTGCCAGATTGAGG...TGTGTTTTTCCTGGCTTTGGAGTAACATGCACTCTCCACCTGCCACCTCACCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS-3UTR GCA 90 bp | CCAACCTGTGCCCTATTACTGTCAGTCAAAGCCTCTTCTAGGGACAATGTTCTTAGGATCTCCTTGGCTTaGCTCTCGCTTGTGTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PTCALLLSVKASSRDNVLRISLA*LSLVSA Trigger: GGCAGACACAAGCGAGAGGCAAGCCAAGGAGATCCT...AAGAACATTGTCCCTAGAAGAGGCTTTGACTGACAGTAATAGGGCACAGGTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS-3UTR GCA 90 bp | CATTGTTTTAAAGTTGTACAGGGACTTCCCACCCACACTCTGAGAGTCACACCACGCCTGGTCCTGGGCTaGAAATTGAGCACAGTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: HCFKVVQGLPTHTLRVTPRLVLG*KLSTVV Trigger: AACCACTGTGCTCAATTTGCAGCCCAGGACCAGGCG...TGGTGTGACTCTCAGAGTGTGGGTGGGAAGTCCCTGTACAACTTTAAAACAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS-3UTR CCA 90 bp | GATATAATGGTATCATTTGGGGAAAACACTCCATTGACTAGTTTCCTTCAGAGTTTGGCGGGTTGGAGCTaGCACCCCTGGCCCTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: DIMVSFGENTPLTSFLQSLAGWS*HPWPWV Trigger: CACCCAGGGCCAGGGGTGCCAGCTCCAACCCGCCAA...ACTCTGAAGGAAACTAGTCAATGGAGTGTTTTCCCCAAATGATACCATTATATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000192345.2 |
||
| CDS-3UTR CCA 90 bp | TGTGGTGAGGTGGCAGGTGGAGAGTGCATGTTACTCCAAAGCCAGGAAAAACACAACACGTCTACGGTCTaGATGGTTTTCATCTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CGEVAGGECMLLQSQEKHNTSTV*MVFIWQ Trigger: CTGCCAGATGAAAACCATCCAGACCGTAGACGTGTT...GTGTTTTTCCTGGCTTTGGAGTAACATGCACTCTCCACCTGCCACCTCACCACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS-3UTR CCA 90 bp | GTGGTGAGGTGGCAGGTGGAGAGTGCATGTTACTCCAAAGCCAGGAAAAACACAAAGAAATTCCACCAGTaGCCGGATGGTTATACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VVRWQVESACYSKARKNTKKFHQ*PDGYTQ Trigger: CTGGGTATAACCATCCGGCCACTGGTGGAATTTCTT...TGTGTTTTTCCTGGCTTTGGAGTAACATGCACTCTCCACCTGCCACCTCACCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS-3UTR CCA 90 bp | CATGTGCCTACCCATTCCAACCTGTGCCCTATTACTGTCAGTCAAAGCCTCTTCAGTGGTTCCAACATCTaGGTCCGAGTCGCTGCTATT | + |
|
Preference number: 4 (lower is better) Translates to: HVPTHSNLCPITVSQSLFSGSNI*VRVAAI Trigger: AATAGCAGCGACTCGGACCCAGATGTTGGAACCACT...GAAGAGGCTTTGACTGACAGTAATAGGGCACAGGTTGGAATGGGTAGGCACATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS-3UTR TCA 90 bp | GTGGTGAGGTGGCAGGTGGAGAGTGCATGTTACTCCAAAGCCAGGAAAAACACAGGAACATTTCAGCAGTaGTGTAGGACAAGTAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VVRWQVESACYSKARKNTGTFQQ*CRTSSC Trigger: ACAGCTACTTGTCCTACATCACTGCTGAAATGTTCC...TGTGTTTTTCCTGGCTTTGGAGTAACATGCACTCTCCACCTGCCACCTCACCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS-3UTR GCA 90 bp | TGTTTTAAAGTTGTACAGGGACTTCCCACCCACACTCTGAGAGTCACACCATTTGAGGAGAAACACCAGTaGAAAGCAGATGGCGCCACG | + |
|
Preference number: 4 (lower is better) Translates to: CFKVVQGLPTHTLRVTPFEEKHQ*KADGAT Trigger: CGTGGCGCCATCTGCTTTGCACTGGTGTTTCTCCTC...AAATGGTGTGACTCTCAGAGTGTGGGTGGGAAGTCCCTGTACAACTTTAAAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS-3UTR GCA 90 bp | AAGTCAAACCCAAAGACTCACCATTTCCTTCAACACTGGAAGGCGGTCTGTATAGAAGACTGTGCCGCCTaGGAATCAGGATCTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KSNPKTHHFLQHWKAVCIEDCAA*ESGSPW Trigger: CCAAGGAGATCCTGATTCGCAGGCGGCACAGTCTTC...TATACAGACCGCCTTCCAGTGTTGAAGGAAATGGTGAGTCTTTGGGTTTGACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| CDS-3UTR CCA 90 bp | TCTTCCCTTTGCCCCTTTGCCCCACAGACTCCATCTGCTTCTGACATGAATGTGCAAGAAGACAAAGAGTaGCTCAATGACCCGGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: SSLCPFAPQTPSASDMNVQEDKE*LNDPDV Trigger: AACATCCGGGTCATTGAGCCACTCTTTGTCTTCTTG...CACATTCATGTCAGAAGCAGATGGAGTCTGTGGGGCAAAGGGGCAAAGGGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192345.2 |
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| CDS-3UTR TCA 90 bp | CCAACCTGTGCCCTATTACTGTCAGTCAAAGCCTCTTCTAGGGACAATGTTCTTCTTCACGGCAGTCATTaGGAGATGCAAATGAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PTCALLLSVKASSRDNVLLHGSH*EMQMRG Trigger: TCCCCTCATTTGCATCTCTCAATGACTGCCGTGAAG...AAGAACATTGTCCCTAGAAGAGGCTTTGACTGACAGTAATAGGGCACAGGTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| CDS-3UTR GCA 90 bp | CCAACCTGTGCCCTATTACTGTCAGTCAAAGCCTCTTCTAGGGACAATGTTCTTCACATCTGTCTTCATTaGCGGGGGAGACTTCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: PTCALLLSVKASSRDNVLHICLH*RGRLLI Trigger: GATGAGAAGTCTCCCCCGGCAATGAAGACAGATGTG...AAGAACATTGTCCCTAGAAGAGGCTTTGACTGACAGTAATAGGGCACAGGTTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| CDS-3UTR GCA 90 bp | TTCATGTGCCTACCCATTCCAACCTGTGCCCTATTACTGTCAGTCAAAGCCTCTTGGAATTCCACAGTGTaGCTACCACAGCATACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FMCLPIPTCALLLSVKASWNSTV*LPQHTR Trigger: TCTGGTATGCTGTGGTAGGCACACTGTGGAATTCCA...AGAGGCTTTGACTGACAGTAATAGGGCACAGGTTGGAATGGGTAGGCACATGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS-3UTR GCA 90 bp | AAGTCAAACCCAAAGACTCACCATTTCCTTCAACACTGGAAGGCGGTCTGTATACAGGACCACTGTGACTaGATCGTTGAGCAGAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: KSNPKTHHFLQHWKAVCIQDHCD*IVEQRL Trigger: GAGTCTCTGCTCAACGATGCAGTCACAGTGGTCCTG...TATACAGACCGCCTTCCAGTGTTGAAGGAAATGGTGAGTCTTTGGGTTTGACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| CDS-3UTR CCA 90 bp | GCTCTGAATGCACTACAGGACAATTTTATTAAAGCGGGTGATCCTGGATCCCTACAGCATCCAGAACGATaGGTGGCAGGAGGTATAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ALNALQDNFIKAGDPGSLQHPER*VAGGIG Trigger: TCCTATACCTCCTGCCACCCATCGTTCTGGATGCTG...TAGGGATCCAGGATCACCCGCTTTAATAAAATTGTCCTGTAGTGCATTCAGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS-3UTR CCA 90 bp | CCAACCTGTGCCCTATTACTGTCAGTCAAAGCCTCTTCTAGGGACAATGTTCTTAAAGAAGGGGCGAGTTaGCATGAAGTAGCCAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: PTCALLLSVKASSRDNVLKEGAS*HEVASI Trigger: GATGCTGGCTACTTCATGCCAACTCGCCCCTTCTTT...AAGAACATTGTCCCTAGAAGAGGCTTTGACTGACAGTAATAGGGCACAGGTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS-3UTR CCA 90 bp | GTGGTGAGGTGGCAGGTGGAGAGTGCATGTTACTCCAAAGCCAGGAAAAACACAATAAGGACACAATACTaGACTTGGGTTGGTTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VVRWQVESACYSKARKNTIRTQY*TWVGFP Trigger: GGGAAAACCAACCCAAGTCCAGTATTGTGTCCTTAT...TGTGTTTTTCCTGGCTTTGGAGTAACATGCACTCTCCACCTGCCACCTCACCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS-3UTR CCA 90 bp | CATTGTTTTAAAGTTGTACAGGGACTTCCCACCCACACTCTGAGAGTCACACCAGAATCAGGATCTCCTTaGCTTGCCTCTCGCTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: HCFKVVQGLPTHTLRVTPESGSP*LASRLC Trigger: ACACAAGCGAGAGGCAAGCCAAGGAGATCCTGATTC...TGGTGTGACTCTCAGAGTGTGGGTGGGAAGTCCCTGTACAACTTTAAAACAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS-3UTR CCA 90 bp | AAGTCAAACCCAAAGACTCACCATTTCCTTCAACACTGGAAGGCGGTCTGTATATGGTGGGGGCTTGGGTaGAACGTCTTCAGTCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: KSNPKTHHFLQHWKAVCIWWGLG*NVFSQT Trigger: AGTTTGACTGAAGACGTTCCACCCAAGCCCCCACCA...TATACAGACCGCCTTCCAGTGTTGAAGGAAATGGTGAGTCTTTGGGTTTGACTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS-3UTR TCA 90 bp | AATTTTAGCACCTTTTCCATGCCAGCTCCACATTGCAGTAGCATAAATTTGGATGGGGGTAATCCAGGGTaGACACGGGCAACCGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: NFSTFSMPAPHCSSINLDGGNPG*TRATDF Trigger: AAAGTCGGTTGCCCGTGTTCACCCTGGATTACCCCC...ATCCAAATTTATGCTACTGCAATGTGGAGCTGGCATGGAAAAGGTGCTAAAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000192345.2 |
||
| CDS-3UTR TCA 90 bp | CATGTGCCTACCCATTCCAACCTGTGCCCTATTACTGTCAGTCAAAGCCTCTTCAGCTGTTCATTGACGTaGATGTTCTCAAAGACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HVPTHSNLCPITVSQSLFSCSLT*MFSKTA Trigger: TGCTGTCTTTGAGAACATTCACGTCAATGAACAGCT...GAAGAGGCTTTGACTGACAGTAATAGGGCACAGGTTGGAATGGGTAGGCACATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS-3UTR TCA 90 bp | GCTCTGAATGCACTACAGGACAATTTTATTAAAGCGGGTGATCCTGGATCCCTAGATCGCCATGATGCCTaGAAGGTGGAACATTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ALNALQDNFIKAGDPGSLDRHDA*KVEHFS Trigger: GCTGAAATGTTCCACCTTTCAGGCATCATGGCGATC...TAGGGATCCAGGATCACCCGCTTTAATAAAATTGTCCTGTAGTGCATTCAGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS-3UTR TCA 90 bp | CCAACCTGTGCCCTATTACTGTCAGTCAAAGCCTCTTCTAGGGACAATGTTCTTCCATTTCGCCTGGCGTaGGCTTCCTTATTTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PTCALLLSVKASSRDNVLPFRLA*ASLFSL Trigger: AAGAGAAAATAAGGAAGCTCACGCCAGGCGAAATGG...AAGAACATTGTCCCTAGAAGAGGCTTTGACTGACAGTAATAGGGCACAGGTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS-3UTR GCA 90 bp | ACTACAGTTTACAGCGTGCAACTCAGTGTCAAGCAAAACCAAGGTAGGAGTTCTACGGGTGGTAAACGCTaGTATGAATCCCAGGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TTVYSVQLSVKQNQGRSSTGGKR*YESQED Trigger: ATCCTCCTGGGATTCATAGCAGCGTTTACCACCCGT...AGAACTCCTACCTTGGTTTTGCTTGACACTGAGTTGCACGCTGTAAACTGTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192345.2 |
||
| CDS-3UTR CCA 90 bp | CCAACCTGTGCCCTATTACTGTCAGTCAAAGCCTCTTCTAGGGACAATGTTCTTTCTCCGGCACGATTGTaGGCAACTTGTGATAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PTCALLLSVKASSRDNVLSPARL*ATCDRD Trigger: ATCTCTATCACAAGTTGCCCACAATCGTGCCGGAGA...AAGAACATTGTCCCTAGAAGAGGCTTTGACTGACAGTAATAGGGCACAGGTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS-3UTR CCA 90 bp | CCAACCTGTGCCCTATTACTGTCAGTCAAAGCCTCTTCTAGGGACAATGTTCTTCCAAACGCCTCAATCTaGCAGATGCCAAACAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: PTCALLLSVKASSRDNVLPNASI*QMPNKD Trigger: GTCTTTGTTTGGCATCTGCCAGATTGAGGCGTTTGG...AAGAACATTGTCCCTAGAAGAGGCTTTGACTGACAGTAATAGGGCACAGGTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS-3UTR CCA 90 bp | TTCATGTGCCTACCCATTCCAACCTGTGCCCTATTACTGTCAGTCAAAGCCTCTCAAGAAGACAAAGAGTaGCTCAATGACCCGGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: FMCLPIPTCALLLSVKASQEDKE*LNDPDV Trigger: AACATCCGGGTCATTGAGCCACTCTTTGTCTTCTTG...AGAGGCTTTGACTGACAGTAATAGGGCACAGGTTGGAATGGGTAGGCACATGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS-3UTR TCA 90 bp | TGTTTTAAAGTTGTACAGGGACTTCCCACCCACACTCTGAGAGTCACACCATTTTCTGGCAGAAGGACTTaGACAAGTTGTACAGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: CFKVVQGLPTHTLRVTPFSGRRT*TSCTGP Trigger: TGGTCCTGTACAACTTGTTCAAGTCCTTCTGCCAGA...AAATGGTGTGACTCTCAGAGTGTGGGTGGGAAGTCCCTGTACAACTTTAAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS-3UTR TCA 90 bp | TTCATGTGCCTACCCATTCCAACCTGTGCCCTATTACTGTCAGTCAAAGCCTCTATTGAGAGATGCAAATaGGGGGACAGTGCTTATCAT | + |
|
Preference number: 4 (lower is better) Translates to: FMCLPIPTCALLLSVKASIERCK*GDSAYH Trigger: ATGATAAGCACTGTCCCCTCATTTGCATCTCTCAAT...AGAGGCTTTGACTGACAGTAATAGGGCACAGGTTGGAATGGGTAGGCACATGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS-3UTR TCA 90 bp | GCTCTGAATGCACTACAGGACAATTTTATTAAAGCGGGTGATCCTGGATCCCTACTGGGAGGCTTTCTTTaGGAACTGATCTGGCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ALNALQDNFIKAGDPGSLLGGFL*ELIWQE Trigger: TTCTTGCCAGATCAGTTCTCAAAGAAAGCCTCCCAG...TAGGGATCCAGGATCACCCGCTTTAATAAAATTGTCCTGTAGTGCATTCAGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS-3UTR CCA 90 bp | GCTCTGAATGCACTACAGGACAATTTTATTAAAGCGGGTGATCCTGGATCCCTAACACCCCAATGCCAATaGAATTCCACAGTGTGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: ALNALQDNFIKAGDPGSLTPQCQ*NSTVCL Trigger: TAGGCACACTGTGGAATTCCATTGGCATTGGGGTGT...TAGGGATCCAGGATCACCCGCTTTAATAAAATTGTCCTGTAGTGCATTCAGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS-3UTR CCA 90 bp | ACTACAGTTTACAGCGTGCAACTCAGTGTCAAGCAAAACCAAGGTAGGAGTTCTACACCCCAATGCCAATaGAATTCCACAGTGTGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: TTVYSVQLSVKQNQGRSSTPQCQ*NSTVCL Trigger: TAGGCACACTGTGGAATTCCATTGGCATTGGGGTGT...AGAACTCCTACCTTGGTTTTGCTTGACACTGAGTTGCACGCTGTAAACTGTAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192345.2 |
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| CDS-3UTR CCA 90 bp | GCACGGGGATCAGACTCAAGACGTTGGCATCTGATCCAGATCAACAATAAAATTCCAAACGCCTCAATCTaGCAGATGCCAAACAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: ARGSDSRRWHLIQINNKIPNASI*QMPNKD Trigger: GTCTTTGTTTGGCATCTGCCAGATTGAGGCGTTTGG...AATTTTATTGTTGATCTGGATCAGATGCCAACGTCTTGAGTCTGATCCCCGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192345.2 |
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| CDS-3UTR CCA 90 bp | CCAACCTGTGCCCTATTACTGTCAGTCAAAGCCTCTTCTAGGGACAATGTTCTTATACTGGACTTGGGTTaGTTTTCCCGAATCAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PTCALLLSVKASSRDNVLILDLG*FSRIRS Trigger: GCTTCTGATTCGGGAAAACCAACCCAAGTCCAGTAT...AAGAACATTGTCCCTAGAAGAGGCTTTGACTGACAGTAATAGGGCACAGGTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| CDS-3UTR CCA 90 bp | TTCATGTGCCTACCCATTCCAACCTGTGCCCTATTACTGTCAGTCAAAGCCTCTACACAATACTGGACTTaGGTTGGTTTTCCCGAATCA | + |
|
Preference number: 4 (lower is better) Translates to: FMCLPIPTCALLLSVKASTQYWT*VGFPES Trigger: TGATTCGGGAAAACCAACCCAAGTCCAGTATTGTGT...AGAGGCTTTGACTGACAGTAATAGGGCACAGGTTGGAATGGGTAGGCACATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| CDS-3UTR GCA 90 bp | ACCCTGAAGACCAGTGTGATCCAAAGACTACCAATCTGTATCTTACAAGGACAACCTCAATCTGGCAGATaGCAAACAAAGACACCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: TLKTSVIQRLPICILQGQPQSGR*QTKTPQ Trigger: TTGGGGTGTCTTTGTTTGGCATCTGCCAGATTGAGG...TTGTCCTTGTAAGATACAGATTGGTAGTCTTTGGATCACACTGGTCTTCAGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192345.2 |
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| CDS-3UTR GCA 90 bp | AATTTTAGCACCTTTTCCATGCCAGCTCCACATTGCAGTAGCATAAATTTGGATCAGGACCACTGTGACTaGATCGTTGAGCAGAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: NFSTFSMPAPHCSSINLDQDHCD*IVEQRL Trigger: GAGTCTCTGCTCAACGATGCAGTCACAGTGGTCCTG...ATCCAAATTTATGCTACTGCAATGTGGAGCTGGCATGGAAAAGGTGCTAAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192345.2 |
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| CDS-3UTR GCA 90 bp | GCTCTGAATGCACTACAGGACAATTTTATTAAAGCGGGTGATCCTGGATCCCTATCTTCACTGACAGCTTaGTGCTTCTTATTGGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: ALNALQDNFIKAGDPGSLSSLTA*CFLLDL Trigger: GAGATCCAATAAGAAGCAGCAAGCTGTCAGTGAAGA...TAGGGATCCAGGATCACCCGCTTTAATAAAATTGTCCTGTAGTGCATTCAGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| CDS-3UTR GCA 90 bp | AAGTCAAACCCAAAGACTCACCATTTCCTTCAACACTGGAAGGCGGTCTGTATATATCATCCCTGTCTCTaGCATTTCAATGGCATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KSNPKTHHFLQHWKAVCIYHPCL*HFNGML Trigger: AAGCATGCCATTGAAATGGCAGAGACAGGGATGATA...TATACAGACCGCCTTCCAGTGTTGAAGGAAATGGTGAGTCTTTGGGTTTGACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| CDS-3UTR CCA 90 bp | TGTTTTAAAGTTGTACAGGGACTTCCCACCCACACTCTGAGAGTCACACCATTTCAGCATACCAGAAAATaGTGCCGAAGTTCTCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: CFKVVQGLPTHTLRVTPFQHTRK*CRSSQR Trigger: TCTTTGAGAACTTCGGCACCATTTTCTGGTATGCTG...AAATGGTGTGACTCTCAGAGTGTGGGTGGGAAGTCCCTGTACAACTTTAAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| CDS-3UTR CCA 90 bp | GCTCTGAATGCACTACAGGACAATTTTATTAAAGCGGGTGATCCTGGATCCCTAATGATGCCTGAAAGGTaGAACATTTCAGCAGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: ALNALQDNFIKAGDPGSLMMPER*NISAVM Trigger: CATCACTGCTGAAATGTTCCACCTTTCAGGCATCAT...TAGGGATCCAGGATCACCCGCTTTAATAAAATTGTCCTGTAGTGCATTCAGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| CDS-3UTR CCA 90 bp | CCAACCTGTGCCCTATTACTGTCAGTCAAAGCCTCTTCTAGGGACAATGTTCTTTCTCTGCCATTTCAATaGCATGCTTTATCTCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PTCALLLSVKASSRDNVLSLPFQ*HALSQA Trigger: AGCTTGAGATAAAGCATGCCATTGAAATGGCAGAGA...AAGAACATTGTCCCTAGAAGAGGCTTTGACTGACAGTAATAGGGCACAGGTTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| CDS-3UTR CCA 90 bp | AATTTTAGCACCTTTTCCATGCCAGCTCCACATTGCAGTAGCATAAATTTGGATAACACGTCTACGGTCTaGATGGTTTTCATCTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NFSTFSMPAPHCSSINLDNTSTV*MVFIWQ Trigger: CTGCCAGATGAAAACCATCCAGACCGTAGACGTGTT...ATCCAAATTTATGCTACTGCAATGTGGAGCTGGCATGGAAAAGGTGCTAAAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000192345.2 |
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| CDS-3UTR TCA 90 bp | AAGTCAAACCCAAAGACTCACCATTTCCTTCAACACTGGAAGGCGGTCTGTATATATAGAGCTGTTCATTaGCGTGAATGTTCTCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KSNPKTHHFLQHWKAVCIYRAVH*RECSQR Trigger: TCTTTGAGAACATTCACGTCAATGAACAGCTCTATA...TATACAGACCGCCTTCCAGTGTTGAAGGAAATGGTGAGTCTTTGGGTTTGACTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| CDS-3UTR TCA 90 bp | ACCCTGAAGACCAGTGTGATCCAAAGACTACCAATCTGTATCTTACAAGGACAATATAGAGCTGTTCATTaGCGTGAATGTTCTCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TLKTSVIQRLPICILQGQYRAVH*RECSQR Trigger: TCTTTGAGAACATTCACGTCAATGAACAGCTCTATA...TTGTCCTTGTAAGATACAGATTGGTAGTCTTTGGATCACACTGGTCTTCAGGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192345.2 |
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| 3UTR CAA 72 bp | CATGATATAATGGTATCATTTGGGGAAAACACTCCATaGACTAGTTTCCTTCAGAGTAACACCCTGAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: HDIMVSFGENTP*TSFLQSNTLKT Trigger: GGTCTTCAGGGTGTTACTCTGAAGGAAACTAGTCAATGGAGTGTTTTCCCCAAATGATACCATTATATCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192345.2 |
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| CDS CCA 90 bp | GGGCCACCACACTGGCAGGACTTGGCGGGTTGGAGCTGGCACCCCTaGCCCTGGGTGCGTCCAGCAGGGTCTCGGCCAGCGCGCCCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: GPPHWQDLAGWSWHP*PWVRPAGSRPARPP Trigger: CGGCGGGCGCGCTGGCCGAGACCCTGCTGGACGCACCCAGGGCCAGGGGTGCCAGCTCCAACCCGCCAAGTCCTGCCAGTGTGGTGGCCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027231.13 ENSMUST00000192345.2 |
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| CDS GCA 90 bp | ACTGGCAGGACTTGGCGGGTTGGAGCTGGCACCCCTGGCCCTGGGTaGGTCCAGCAGGGTCTCGGCCAGCGCGCCCGCCGGCACTGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: TGRTWRVGAGTPGPG*VQQGLGQRARRHCH Trigger: GTGGCAGTGCCGGCGGGCGCGCTGGCCGAGACCCTGCTGGACGCACCCAGGGCCAGGGGTGCCAGCTCCAACCCGCCAAGTCCTGCCAGT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027231.13 ENSMUST00000192345.2 |
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| CDS CCA 90 bp | CCACACTGGCAGGACTTGGCGGGTTGGAGCTGGCACCCCTGGCCCTaGGTGCGTCCAGCAGGGTCTCGGCCAGCGCGCCCGCCGGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: PHWQDLAGWSWHPWP*VRPAGSRPARPPAL Trigger: CAGTGCCGGCGGGCGCGCTGGCCGAGACCCTGCTGGACGCACCCAGGGCCAGGGGTGCCAGCTCCAACCCGCCAAGTCCTGCCAGTGTGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027231.13 ENSMUST00000192345.2 |
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| CDS GCA 90 bp | GCGTCCAGCAGGGTCTCGGCCAGCGCGCCCGCCGGCACTGCCACCTaGAGAGACAGCAGCAGCAGCAGCAGCCAAGACAGTGGCGCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: ASSRVSASAPAGTAT*RDSSSSSSQDSGAR Trigger: GCGGGCGCCACTGTCTTGGCTGCTGCTGCTGCTGCTGTCTCTGCAGGTGGCAGTGCCGGCGGGCGCGCTGGCCGAGACCCTGCTGGACGC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027231.13 ENSMUST00000192345.2 |
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| CDS CCA 90 bp | TCGTTCCCGGGGCCACCACACTGGCAGGACTTGGCGGGTTGGAGCTaGCACCCCTGGCCCTGGGTGCGTCCAGCAGGGTCTCGGCCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: SFPGPPHWQDLAGWS*HPWPWVRPAGSRPA Trigger: CGCTGGCCGAGACCCTGCTGGACGCACCCAGGGCCAGGGGTGCCAGCTCCAACCCGCCAAGTCCTGCCAGTGTGGTGGCCCCGGGAACGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027231.13 ENSMUST00000192345.2 |
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| CDS GCA 90 bp | CCTGGGTGCGTCCAGCAGGGTCTCGGCCAGCGCGCCCGCCGGCACTaGCACCTGCAGAGACAGCAGCAGCAGCAGCAGCCAAGACAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PGCVQQGLGQRARRH*HLQRQQQQQQPRQW Trigger: CCACTGTCTTGGCTGCTGCTGCTGCTGCTGTCTCTGCAGGTGGCAGTGCCGGCGGGCGCGCTGGCCGAGACCCTGCTGGACGCACCCAGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027231.13 ENSMUST00000192345.2 |
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| CDS TCA 90 bp | TCATGGCTTTTCATTGCCAAGGCGGCCTTTCCTGTTCCCGGGTTCTaGCGCTCGTCGCACCAACCTTGGTGGGGGCTTGGGTGGAACGTC | + |
|
Preference number: 5 (lower is better) Translates to: SWLFIAKAAFPVPGF*RSSHQPWWGLGWNV Trigger: GACGTTCCACCCAAGCCCCCACCAAGGTTGGTGCGACGAGCGTCAGAACCCGGGAACAGGAAAGGCCGCCTTGGCAATGAAAAGCCATGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| CDS CCA 90 bp | TGTTCCCGGGTTCTGACGCTCGTCGCACCAACCTTGGTGGGGGCTTaGGTGGAACGTCTTCAGTCAAACTGTCTTCCCTACCCCGGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: CSRVLTLVAPTLVGA*VERLQSNCLPYPGQ Trigger: TTGGCCGGGGTAGGGAAGACAGTTTGACTGAAGACGTTCCACCCAAGCCCCCACCAAGGTTGGTGCGACGAGCGTCAGAACCCGGGAACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| CDS GCA 90 bp | CCGCCTGCGAATCAGGATCTCCTTGGCTTGCCTCTCGCTTGTGTCTaGCGTCAGGTTGTGTCTGTTATAGGACAAGGTCCGCTGACGGAT | + |
|
Preference number: 5 (lower is better) Translates to: PPANQDLLGLPLACV*RQVVSVIGQGPLTD Trigger: ATCCGTCAGCGGACCTTGTCCTATAACAGACACAACCTGACGGCAGACACAAGCGAGAGGCAAGCCAAGGAGATCCTGATTCGCAGGCGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| CDS TCA 90 bp | TGGTCCTTGAAGGTTAGCGGGATGGTCCGGAACCAGTTAATCACCTaGGTCAGGACAAAGACGCCCAGTGCTCGCCAGATCAGGCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: WSLKVSGMVRNQLIT*VRTKTPSARQIRQK Trigger: CTTCTGCCTGATCTGGCGAGCACTGGGCGTCTTTGTCCTGACTCAGGTGATTAACTGGTTCCGGACCATCCCGCTAACCTTCAAGGACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| CDS GCA 90 bp | CAGCTTCTTTCGGGGAAACACAGTAGCAGGGAGGAGAAACACCAGTaGAAAGCAGATGGCGCCACGGAGCCCTCCGTAGGCAATGATGAA | + |
|
Preference number: 5 (lower is better) Translates to: QLLSGKHSSREEKHQ*KADGATEPSVGNDE Trigger: TTCATCATTGCCTACGGAGGGCTCCGTGGCGCCATCTGCTTTGCACTGGTGTTTCTCCTCCCTGCTACTGTGTTTCCCCGAAAGAAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| CDS GCA 90 bp | TCGCGGTTTGAGCTGTTGTCTTTCCTGAGACTTTCCCGAAGACTGTaGCGCCTGCGAATCAGGATCTCCTTGGCTTGCCTCTCGCTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SRFELLSFLRLSRRL*RLRIRISLACLSLV Trigger: CACAAGCGAGAGGCAAGCCAAGGAGATCCTGATTCGCAGGCGGCACAGTCTTCGGGAAAGTCTCAGGAAAGACAACAGCTCAAACCGCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| CDS TCA 90 bp | TTGAGAACTGATCTGGCAAGAAGCGCCTGGTCCTGGGCTGCAAATTaGGCACAGTGGTTCCAACATCTGGGTCCGAGTCGCTGCTATTTC | + |
|
Preference number: 5 (lower is better) Translates to: LRTDLARSAWSWAAN*AQWFQHLGPSRCYF Trigger: GAAATAGCAGCGACTCGGACCCAGATGTTGGAACCACTGTGCTCAATTTGCAGCCCAGGACCAGGCGCTTCTTGCCAGATCAGTTCTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| CDS-3UTR CAA 90 bp | AGGAGGCATGTCCCCGAACACTTTTTAACTGAGGTCCCACTTACAGCAGGTCGGGATCTCGAAAGGGATTaGCACGTGGGGGTAATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RRHVPEHFLTEVPLTAGRDLERD*HVGVIQ Trigger: CTGGATTACCCCCACGTGCAAATCCCTTTCGAGATC...CCGACCTGCTGTAAGTGGGACCTCAGTTAAAAAGTGTTCGGGGACATGCCTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000192345.2 |
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| CDS-3UTR CAA 90 bp | TATGACGCTGAGTTCGGCTTCTTCCCTTTGCCCCTTTGCCCCACAGACTCCATCACTGTGACTGCATCGTaGAGCAGAGACTCGCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: YDAEFGFFPLPLCPTDSITVTAS*SRDSPK Trigger: TTTTGGCGAGTCTCTGCTCAACGATGCAGTCACAGT...GATGGAGTCTGTGGGGCAAAGGGGCAAAGGGAAGAAGCCGAACTCAGCGTCATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192345.2 |
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| CDS-3UTR CAA 90 bp | GTGATGCAACCTTGCTGGAATATTTCGCAGCCTCCCTCAGGGAGCACGGGGATCATCTGGCAGAAGGACTaGAACAAGTTGTACAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: VMQPCWNISQPPSGSTGIIWQKD*NKLYRT Trigger: GGTCCTGTACAACTTGTTCAAGTCCTTCTGCCAGAT...GATCCCCGTGCTCCCTGAGGGAGGCTGCGAAATATTCCAGCAAGGTTGCATCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192345.2 |
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| CDS-3UTR CAA 90 bp | CCAACCTGTGCCCTATTACTGTCAGTCAAAGCCTCTTCTAGGGACAATGTTCTTCCAAACCGTTGGTCTTaGGAGAGCAGGGGCTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: PTCALLLSVKASSRDNVLPNRWS*ESRGCL Trigger: GAGGCAGCCCCTGCTCTCCAAAGACCAACGGTTTGG...AAGAACATTGTCCCTAGAAGAGGCTTTGACTGACAGTAATAGGGCACAGGTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| CDS-3UTR CAA 90 bp | TGTTTTAAAGTTGTACAGGGACTTCCCACCCACACTCTGAGAGTCACACCATTTCTCGTCGCACCAACCTaGGTGGGGGCTTGGGTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: CFKVVQGLPTHTLRVTPFLVAPT*VGAWVE Trigger: TTCCACCCAAGCCCCCACCAAGGTTGGTGCGACGAG...AAATGGTGTGACTCTCAGAGTGTGGGTGGGAAGTCCCTGTACAACTTTAAAACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| CDS TCA 90 bp | CACCTCGTTCTTCCATTCCATTTTGTAGGCCTGGGAGGCTTTCTTTaGGAACTGATCTGGCAAGAAGCGCCTGGTCCTGGGCTGCAAATT | + |
|
Preference number: 5 (lower is better) Translates to: HLVLPFHFVGLGGFL*ELIWQEAPGPGLQI Trigger: AATTTGCAGCCCAGGACCAGGCGCTTCTTGCCAGATCAGTTCTCAAAGAAAGCCTCCCAGGCCTACAAAATGGAATGGAAGAACGAGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| CDS-3UTR CAA 90 bp | CATTGTTTTAAAGTTGTACAGGGACTTCCCACCCACACTCTGAGAGTCACACCACAGGATCTCCTTGGCTaGCCTCTCGCTTGTGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: HCFKVVQGLPTHTLRVTPQDLLG*PLACVC Trigger: GCAGACACAAGCGAGAGGCAAGCCAAGGAGATCCTG...TGGTGTGACTCTCAGAGTGTGGGTGGGAAGTCCCTGTACAACTTTAAAACAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| CDS CCA 90 bp | CCCACGACGAAGAAGTTAGCGATGCCAGCAAACACGTCTACGGTCTaGATGGTTTTCATCTGGCAGAAGGACTTGAACAAGTTGTACAGG | + |
|
Preference number: 5 (lower is better) Translates to: PTTKKLAMPANTSTV*MVFIWQKDLNKLYR Trigger: CCTGTACAACTTGTTCAAGTCCTTCTGCCAGATGAAAACCATCCAGACCGTAGACGTGTTTGCTGGCATCGCTAACTTCTTCGTCGTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027231.13 ENSMUST00000192345.2 |
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| CDS-3UTR CAA 90 bp | CATGTGCCTACCCATTCCAACCTGTGCCCTATTACTGTCAGTCAAAGCCTCTTCACTGTGACTGCATCGTaGAGCAGAGACTCGCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: HVPTHSNLCPITVSQSLFTVTAS*SRDSPK Trigger: TTTTGGCGAGTCTCTGCTCAACGATGCAGTCACAGT...GAAGAGGCTTTGACTGACAGTAATAGGGCACAGGTTGGAATGGGTAGGCACATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| CDS-3UTR CAA 90 bp | TGTGGTGAGGTGGCAGGTGGAGAGTGCATGTTACTCCAAAGCCAGGAAAAACACGACACAATACTGGACTaGGGTTGGTTTTCCCGAATC | + |
|
Preference number: 5 (lower is better) Translates to: CGEVAGGECMLLQSQEKHDTILD*GWFSRI Trigger: GATTCGGGAAAACCAACCCAAGTCCAGTATTGTGTC...GTGTTTTTCCTGGCTTTGGAGTAACATGCACTCTCCACCTGCCACCTCACCACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| CDS-3UTR CAA 90 bp | TTCATGTGCCTACCCATTCCAACCTGTGCCCTATTACTGTCAGTCAAAGCCTCTACACATCTGTCTTCATaGCCGGGGGAGACTTCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: FMCLPIPTCALLLSVKASTHLSS*PGETSH Trigger: ATGAGAAGTCTCCCCCGGCAATGAAGACAGATGTGT...AGAGGCTTTGACTGACAGTAATAGGGCACAGGTTGGAATGGGTAGGCACATGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| CDS-3UTR CAA 90 bp | CATTGTTTTAAAGTTGTACAGGGACTTCCCACCCACACTCTGAGAGTCACACCAGTCCTGGGCTGCAAATaGAGCACAGTGGTTCCAACA | + |
|
Preference number: 5 (lower is better) Translates to: HCFKVVQGLPTHTLRVTPVLGCK*STVVPT Trigger: TGTTGGAACCACTGTGCTCAATTTGCAGCCCAGGAC...TGGTGTGACTCTCAGAGTGTGGGTGGGAAGTCCCTGTACAACTTTAAAACAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| CDS-3UTR CAA 90 bp | TGTTTTAAAGTTGTACAGGGACTTCCCACCCACACTCTGAGAGTCACACCATTTGATCTCGAAAGGGATTaGCACGTGGGGGTAATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: CFKVVQGLPTHTLRVTPFDLERD*HVGVIQ Trigger: CTGGATTACCCCCACGTGCAAATCCCTTTCGAGATC...AAATGGTGTGACTCTCAGAGTGTGGGTGGGAAGTCCCTGTACAACTTTAAAACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| CDS-3UTR CAA 90 bp | TGTTTTAAAGTTGTACAGGGACTTCCCACCCACACTCTGAGAGTCACACCATTTAGCTCTCCGGCACGATaGTGGGCAACTTGTGATAGA | + |
|
Preference number: 5 (lower is better) Translates to: CFKVVQGLPTHTLRVTPFSSPAR*WATCDR Trigger: TCTATCACAAGTTGCCCACAATCGTGCCGGAGAGCT...AAATGGTGTGACTCTCAGAGTGTGGGTGGGAAGTCCCTGTACAACTTTAAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS-3UTR CAA 90 bp | CATGTGCCTACCCATTCCAACCTGTGCCCTATTACTGTCAGTCAAAGCCTCTTCCTCTTCACTGACAGCTaGCTGCTTCTTATTGGATCT | + |
|
Preference number: 5 (lower is better) Translates to: HVPTHSNLCPITVSQSLFLFTDS*LLLIGS Trigger: AGATCCAATAAGAAGCAGCAAGCTGTCAGTGAAGAG...GAAGAGGCTTTGACTGACAGTAATAGGGCACAGGTTGGAATGGGTAGGCACATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS-3UTR CAA 90 bp | CATTGTTTTAAAGTTGTACAGGGACTTCCCACCCACACTCTGAGAGTCACACCATCTTCACGGCAGTCATaGAGAGATGCAAATGAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: HCFKVVQGLPTHTLRVTPSSRQS*RDANEG Trigger: CCCCTCATTTGCATCTCTCAATGACTGCCGTGAAGA...TGGTGTGACTCTCAGAGTGTGGGTGGGAAGTCCCTGTACAACTTTAAAACAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS TCA 90 bp | GGTTCCAACATCTGGGTCCGAGTCGCTGCTATTTCCATCTGCATTTaGAACCTTCTTCTTCTTCTGCAGCTTCTCTGGAAGCTTTGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: GSNIWVRVAAISICI*NLLLLLQLLWKLCV Trigger: AACACAAAGCTTCCAGAGAAGCTGCAGAAGAAGAAGAAGGTTTCAAATGCAGATGGAAATAGCAGCGACTCGGACCCAGATGTTGGAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS GCA 90 bp | AGATGCCAAACAAAGACACCCCAATGCCAATGGAATTCCACAGTGTaGCTACCACAGCATACCAGAAAATGGTGCCGAAGTTCTCAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: RCQTKTPQCQWNSTV*LPQHTRKWCRSSQR Trigger: TCTTTGAGAACTTCGGCACCATTTTCTGGTATGCTGTGGTAGGCACACTGTGGAATTCCATTGGCATTGGGGTGTCTTTGTTTGGCATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027231.13 ENSMUST00000192345.2 |
||
| CDS-3UTR CAA 90 bp | CATTGTTTTAAAGTTGTACAGGGACTTCCCACCCACACTCTGAGAGTCACACCAATCTGGCAGAAGGACTaGAACAAGTTGTACAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: HCFKVVQGLPTHTLRVTPIWQKD*NKLYRT Trigger: GGTCCTGTACAACTTGTTCAAGTCCTTCTGCCAGAT...TGGTGTGACTCTCAGAGTGTGGGTGGGAAGTCCCTGTACAACTTTAAAACAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS-3UTR CAA 90 bp | TGTTTTAAAGTTGTACAGGGACTTCCCACCCACACTCTGAGAGTCACACCATTTATGATGAACTGGTCCTaGAAGGTTAGCGGGATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: CFKVVQGLPTHTLRVTPFMMNWS*KVSGMV Trigger: GACCATCCCGCTAACCTTCAAGGACCAGTTCATCAT...AAATGGTGTGACTCTCAGAGTGTGGGTGGGAAGTCCCTGTACAACTTTAAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS-3UTR CAA 90 bp | GTGGTGAGGTGGCAGGTGGAGAGTGCATGTTACTCCAAAGCCAGGAAAAACACAGCTTGCTGCTTCTTATaGGATCTCTTAACATCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: VVRWQVESACYSKARKNTACCFL*DLLTSR Trigger: TCTTGATGTTAAGAGATCCAATAAGAAGCAGCAAGC...TGTGTTTTTCCTGGCTTTGGAGTAACATGCACTCTCCACCTGCCACCTCACCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS-3UTR CAA 90 bp | GCTCTGAATGCACTACAGGACAATTTTATTAAAGCGGGTGATCCTGGATCCCTATCGCGGTTTGAGCTGTaGTCTTTCCTGAGACTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: ALNALQDNFIKAGDPGSLSRFEL*SFLRLS Trigger: GGAAAGTCTCAGGAAAGACAACAGCTCAAACCGCGA...TAGGGATCCAGGATCACCCGCTTTAATAAAATTGTCCTGTAGTGCATTCAGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS-3UTR CAA 90 bp | AAGTCAAACCCAAAGACTCACCATTTCCTTCAACACTGGAAGGCGGTCTGTATAATAAATATCGGGAGGTaGAAGTGGAAGCCCTGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: KSNPKTHHFLQHWKAVCIINIGR*KWKPCA Trigger: AGCGCAGGGCTTCCACTTCAACCTCCCGATATTTAT...TATACAGACCGCCTTCCAGTGTTGAAGGAAATGGTGAGTCTTTGGGTTTGACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS-3UTR CAA 90 bp | GCTCTGAATGCACTACAGGACAATTTTATTAAAGCGGGTGATCCTGGATCCCTACCTGGGAGGCTTTCTTaGAGAACTGATCTGGCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: ALNALQDNFIKAGDPGSLPGRLS*RTDLAR Trigger: TCTTGCCAGATCAGTTCTCAAAGAAAGCCTCCCAGG...TAGGGATCCAGGATCACCCGCTTTAATAAAATTGTCCTGTAGTGCATTCAGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS-3UTR CAA 90 bp | AATTTTAGCACCTTTTCCATGCCAGCTCCACATTGCAGTAGCATAAATTTGGATAGCTCTCCGGCACGATaGTGGGCAACTTGTGATAGA | + |
|
Preference number: 5 (lower is better) Translates to: NFSTFSMPAPHCSSINLDSSPAR*WATCDR Trigger: TCTATCACAAGTTGCCCACAATCGTGCCGGAGAGCT...ATCCAAATTTATGCTACTGCAATGTGGAGCTGGCATGGAAAAGGTGCTAAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192345.2 |
||
| CDS-3UTR CAA 90 bp | TGTTTTAAAGTTGTACAGGGACTTCCCACCCACACTCTGAGAGTCACACCATTTAATACTGGACTTGGGTaGGTTTTCCCGAATCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: CFKVVQGLPTHTLRVTPFNTGLG*VFPNQK Trigger: CTTCTGATTCGGGAAAACCAACCCAAGTCCAGTATT...AAATGGTGTGACTCTCAGAGTGTGGGTGGGAAGTCCCTGTACAACTTTAAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS-3UTR CAA 90 bp | CATTGTTTTAAAGTTGTACAGGGACTTCCCACCCACACTCTGAGAGTCACACCAAGCTTCCGAAGGTATTaGTCATCAAACTTCTTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: HCFKVVQGLPTHTLRVTPSFRRY*SSNFLN Trigger: GTTTAAGAAGTTTGATGACAAATACCTTCGGAAGCT...TGGTGTGACTCTCAGAGTGTGGGTGGGAAGTCCCTGTACAACTTTAAAACAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS CCA 90 bp | TTGCTGCTTCTTATTGGATCTCTTAACATCAAGAAATTCCACCAGTaGCCGGATGGTTATACCCAGGATGAAGACAGTGAAGAATATAAC | + |
|
Preference number: 5 (lower is better) Translates to: LLLLIGSLNIKKFHQ*PDGYTQDEDSEEYN Trigger: GTTATATTCTTCACTGTCTTCATCCTGGGTATAACCATCCGGCCACTGGTGGAATTTCTTGATGTTAAGAGATCCAATAAGAAGCAGCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS GCA 90 bp | GAGTCGCTGCTATTTCCATCTGCATTTGAAACCTTCTTCTTCTTCTaGAGCTTCTCTGGAAGCTTTGTGTTCTTAGGTAAGGATAAATAT | + |
|
Preference number: 5 (lower is better) Translates to: ESLLFPSAFETFFFF*SFSGSFVFLGKDKY Trigger: ATATTTATCCTTACCTAAGAACACAAAGCTTCCAGAGAAGCTGCAGAAGAAGAAGAAGGTTTCAAATGCAGATGGAAATAGCAGCGACTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS CCA 90 bp | CAATGGCATGCTTTATCTCAAGCTTTTTATATAAGGACACAATACTaGACTTGGGTTGGTTTTCCCGAATCAGAAGCTTCCGAAGGTATT | + |
|
Preference number: 5 (lower is better) Translates to: QWHALSQAFYIRTQY*TWVGFPESEASEGI Trigger: AATACCTTCGGAAGCTTCTGATTCGGGAAAACCAACCCAAGTCCAGTATTGTGTCCTTATATAAAAAGCTTGAGATAAAGCATGCCATTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS CCA 90 bp | CATGCTTTATCTCAAGCTTTTTATATAAGGACACAATACTGGACTTaGGTTGGTTTTCCCGAATCAGAAGCTTCCGAAGGTATTTGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: HALSQAFYIRTQYWT*VGFPESEASEGICH Trigger: ATGACAAATACCTTCGGAAGCTTCTGATTCGGGAAAACCAACCCAAGTCCAGTATTGTGTCCTTATATAAAAAGCTTGAGATAAAGCATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS CCA 90 bp | TTTATCTCAAGCTTTTTATATAAGGACACAATACTGGACTTGGGTTaGTTTTCCCGAATCAGAAGCTTCCGAAGGTATTTGTCATCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: FISSFLYKDTILDLG*FSRIRSFRRYLSSN Trigger: GTTTGATGACAAATACCTTCGGAAGCTTCTGATTCGGGAAAACCAACCCAAGTCCAGTATTGTGTCCTTATATAAAAAGCTTGAGATAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS GCA 72 bp | ACTTGGCGGGTTGGAGCTGGCACCCCTGGCCCTGGGTaGGTCCAGCAGGGTCTCGGCCAGCGCGCCCGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: TWRVGAGTPGPG*VQQGLGQRARR Trigger: CCGGCGGGCGCGCTGGCCGAGACCCTGCTGGACGCACCCAGGGCCAGGGGTGCCAGCTCCAACCCGCCAAGT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027231.13 ENSMUST00000192345.2 |
||
| CDS CCA 72 bp | CAGGACTTGGCGGGTTGGAGCTGGCACCCCTGGCCCTaGGTGCGTCCAGCAGGGTCTCGGCCAGCGCGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: QDLAGWSWHPWP*VRPAGSRPARP Trigger: CGGGCGCGCTGGCCGAGACCCTGCTGGACGCACCCAGGGCCAGGGGTGCCAGCTCCAACCCGCCAAGTCCTG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027231.13 ENSMUST00000192345.2 |
||
| CDS CCA 72 bp | CGGCGTCGTTCCCGGGGCCACCACACTGGCAGGACTTaGCGGGTTGGAGCTGGCACCCCTGGCCCTGGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: RRRSRGHHTGRT*RVGAGTPGPGC Trigger: GCACCCAGGGCCAGGGGTGCCAGCTCCAACCCGCCAAGTCCTGCCAGTGTGGTGGCCCCGGGAACGACGCCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027231.13 ENSMUST00000192345.2 |
||
| CDS GCA 72 bp | GTCCAGCAGGGTCTCGGCCAGCGCGCCCGCCGGCACTaGCACCTGCAGAGACAGCAGCAGCAGCAGCAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: VQQGLGQRARRH*HLQRQQQQQQP Trigger: TGGCTGCTGCTGCTGCTGCTGTCTCTGCAGGTGGCAGTGCCGGCGGGCGCGCTGGCCGAGACCCTGCTGGAC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027231.13 ENSMUST00000192345.2 |
||
| CDS CCA 72 bp | CACTGGCAGGACTTGGCGGGTTGGAGCTGGCACCCCTaGCCCTGGGTGCGTCCAGCAGGGTCTCGGCCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: HWQDLAGWSWHP*PWVRPAGSRPA Trigger: CGCTGGCCGAGACCCTGCTGGACGCACCCAGGGCCAGGGGTGCCAGCTCCAACCCGCCAAGTCCTGCCAGTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027231.13 ENSMUST00000192345.2 |
||
| CDS CAA 72 bp | GTTCCCGGGGCCACCACACTGGCAGGACTTGGCGGGTaGGAGCTGGCACCCCTGGCCCTGGGTGCGTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: VPGATTLAGLGG*ELAPLALGASS Trigger: GCTGGACGCACCCAGGGCCAGGGGTGCCAGCTCCAACCCGCCAAGTCCTGCCAGTGTGGTGGCCCCGGGAAC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027231.13 ENSMUST00000192345.2 |
||
| CDS CAA 72 bp | ACGGCGTCGTTCCCGGGGCCACCACACTGGCAGGACTaGGCGGGTTGGAGCTGGCACCCCTGGCCCTGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: TASFPGPPHWQD*AGWSWHPWPWV Trigger: CACCCAGGGCCAGGGGTGCCAGCTCCAACCCGCCAAGTCCTGCCAGTGTGGTGGCCCCGGGAACGACGCCGT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027231.13 ENSMUST00000192345.2 |
||
| CDS CAA 90 bp | AACGGCGTCGTTCCCGGGGCCACCACACTGGCAGGACTTGGCGGGTaGGAGCTGGCACCCCTGGCCCTGGGTGCGTCCAGCAGGGTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: NGVVPGATTLAGLGG*ELAPLALGASSRVS Trigger: CGAGACCCTGCTGGACGCACCCAGGGCCAGGGGTGCCAGCTCCAACCCGCCAAGTCCTGCCAGTGTGGTGGCCCCGGGAACGACGCCGTT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027231.13 ENSMUST00000192345.2 |
||
| CDS CCA 72 bp | GGGCCACCACACTGGCAGGACTTGGCGGGTTGGAGCTaGCACCCCTGGCCCTGGGTGCGTCCAGCAGGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: GPPHWQDLAGWS*HPWPWVRPAGS Trigger: AGACCCTGCTGGACGCACCCAGGGCCAGGGGTGCCAGCTCCAACCCGCCAAGTCCTGCCAGTGTGGTGGCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027231.13 ENSMUST00000192345.2 |
||
| CDS CCA 72 bp | TTCCCGGGGCCACCACACTGGCAGGACTTGGCGGGTTaGAGCTGGCACCCCTGGCCCTGGGTGCGTCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: FPGPPHWQDLAG*SWHPWPWVRPA Trigger: TGCTGGACGCACCCAGGGCCAGGGGTGCCAGCTCCAACCCGCCAAGTCCTGCCAGTGTGGTGGCCCCGGGAA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027231.13 ENSMUST00000192345.2 |
||
| CDS GCA 72 bp | AGGGTCTCGGCCAGCGCGCCCGCCGGCACTGCCACCTaGAGAGACAGCAGCAGCAGCAGCAGCCAAGACAGT | + |
|
Preference number: 6 (lower is better) Translates to: RVSASAPAGTAT*RDSSSSSSQDS Trigger: ACTGTCTTGGCTGCTGCTGCTGCTGCTGTCTCTGCAGGTGGCAGTGCCGGCGGGCGCGCTGGCCGAGACCCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027231.13 ENSMUST00000192345.2 |
||
| CDS CCA 72 bp | TTTCCTCGAACGGCGTCGTTCCCGGGGCCACCACACTaGCAGGACTTGGCGGGTTGGAGCTGGCACCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: FPRTASFPGPPH*QDLAGWSWHPW Trigger: CCAGGGGTGCCAGCTCCAACCCGCCAAGTCCTGCCAGTGTGGTGGCCCCGGGAACGACGCCGTTCGAGGAAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027231.13 ENSMUST00000192345.2 |
||
| CDS TCA 72 bp | TTCATTGCCAAGGCGGCCTTTCCTGTTCCCGGGTTCTaGCGCTCGTCGCACCAACCTTGGTGGGGGCTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: FIAKAAFPVPGF*RSSHQPWWGLG Trigger: CCCAAGCCCCCACCAAGGTTGGTGCGACGAGCGTCAGAACCCGGGAACAGGAAAGGCCGCCTTGGCAATGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS CAA 90 bp | CTGTTCCCGGGTTCTGACGCTCGTCGCACCAACCTTGGTGGGGGCTaGGGTGGAACGTCTTCAGTCAAACTGTCTTCCCTACCCCGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LFPGSDARRTNLGGG*GGTSSVKLSSLPRP Trigger: TGGCCGGGGTAGGGAAGACAGTTTGACTGAAGACGTTCCACCCAAGCCCCCACCAAGGTTGGTGCGACGAGCGTCAGAACCCGGGAACAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS CAA 90 bp | GGCGGCCTTTCCTGTTCCCGGGTTCTGACGCTCGTCGCACCAACCTaGGTGGGGGCTTGGGTGGAACGTCTTCAGTCAAACTGTCTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: GGLSCSRVLTLVAPT*VGAWVERLQSNCLP Trigger: GGGAAGACAGTTTGACTGAAGACGTTCCACCCAAGCCCCCACCAAGGTTGGTGCGACGAGCGTCAGAACCCGGGAACAGGAAAGGCCGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS CCA 72 bp | CCCGAAGACTGTGCCGCCTGCGAATCAGGATCTCCTTaGCTTGCCTCTCGCTTGTGTCTGCCGTCAGGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: PEDCAACESGSP*LASRLCLPSGC Trigger: ACAACCTGACGGCAGACACAAGCGAGAGGCAAGCCAAGGAGATCCTGATTCGCAGGCGGCACAGTCTTCGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS CCA 72 bp | TCAGTCAAACTGTCTTCCCTACCCCGGCCAAACCGTTaGTCTTTGGAGAGCAGGGGCTGCCTCAGCAACCCC | + |
|
Preference number: 6 (lower is better) Translates to: SVKLSSLPRPNR*SLESRGCLSNP Trigger: GGGGTTGCTGAGGCAGCCCCTGCTCTCCAAAGACCAACGGTTTGGCCGGGGTAGGGAAGACAGTTTGACTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS CAA 72 bp | TCCCGAAGACTGTGCCGCCTGCGAATCAGGATCTCCTaGGCTTGCCTCTCGCTTGTGTCTGCCGTCAGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SRRLCRLRIRIS*ACLSLVSAVRL Trigger: CAACCTGACGGCAGACACAAGCGAGAGGCAAGCCAAGGAGATCCTGATTCGCAGGCGGCACAGTCTTCGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS CAA 72 bp | TCCTGTTCCCGGGTTCTGACGCTCGTCGCACCAACCTaGGTGGGGGCTTGGGTGGAACGTCTTCAGTCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: SCSRVLTLVAPT*VGAWVERLQSN Trigger: GTTTGACTGAAGACGTTCCACCCAAGCCCCCACCAAGGTTGGTGCGACGAGCGTCAGAACCCGGGAACAGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS TCA 72 bp | TCTCGAAAGGGATTTGCACGTGGGGGTAATCCAGGGTaGACACGGGCAACCGACTTTCCTCGAACGGCGTCG | + |
|
Preference number: 6 (lower is better) Translates to: SRKGFARGGNPG*TRATDFPRTAS Trigger: CGACGCCGTTCGAGGAAAGTCGGTTGCCCGTGTTCACCCTGGATTACCCCCACGTGCAAATCCCTTTCGAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027231.13 ENSMUST00000192345.2 |
||
| CDS TCA 72 bp | GATCTGGCAAGAAGCGCCTGGTCCTGGGCTGCAAATTaGGCACAGTGGTTCCAACATCTGGGTCCGAGTCGC | + |
|
Preference number: 6 (lower is better) Translates to: DLARSAWSWAAN*AQWFQHLGPSR Trigger: GCGACTCGGACCCAGATGTTGGAACCACTGTGCTCAATTTGCAGCCCAGGACCAGGCGCTTCTTGCCAGATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS GCA 72 bp | AGACTGTGCCGCCTGCGAATCAGGATCTCCTTGGCTTaGCTCTCGCTTGTGTCTGCCGTCAGGTTGTGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: RLCRLRIRISLA*LSLVSAVRLCL Trigger: CAGACACAACCTGACGGCAGACACAAGCGAGAGGCAAGCCAAGGAGATCCTGATTCGCAGGCGGCACAGTCT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS CAA 72 bp | TTCAGTCAAACTGTCTTCCCTACCCCGGCCAAACCGTaGGTCTTTGGAGAGCAGGGGCTGCCTCAGCAACCC | + |
|
Preference number: 6 (lower is better) Translates to: FSQTVFPTPAKP*VFGEQGLPQQP Trigger: GGGTTGCTGAGGCAGCCCCTGCTCTCCAAAGACCAACGGTTTGGCCGGGGTAGGGAAGACAGTTTGACTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS CAA 90 bp | GACTGTGCCGCCTGCGAATCAGGATCTCCTTGGCTTGCCTCTCGCTaGTGTCTGCCGTCAGGTTGTGTCTGTTATAGGACAAGGTCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: DCAACESGSPWLASR*CLPSGCVCYRTRSA Trigger: AGCGGACCTTGTCCTATAACAGACACAACCTGACGGCAGACACAAGCGAGAGGCAAGCCAAGGAGATCCTGATTCGCAGGCGGCACAGTC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS CAA 90 bp | TATCGGGAGGTTGAAGTGGAAGCCCTGCGCTCGCGGTTTGAGCTGTaGTCTTTCCTGAGACTTTCCCGAAGACTGTGCCGCCTGCGAATC | + |
|
Preference number: 6 (lower is better) Translates to: YREVEVEALRSRFEL*SFLRLSRRLCRLRI Trigger: GATTCGCAGGCGGCACAGTCTTCGGGAAAGTCTCAGGAAAGACAACAGCTCAAACCGCGAGCGCAGGGCTTCCACTTCAACCTCCCGATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS CCA 72 bp | GTTCTGACGCTCGTCGCACCAACCTTGGTGGGGGCTTaGGTGGAACGTCTTCAGTCAAACTGTCTTCCCTAC | + |
|
Preference number: 6 (lower is better) Translates to: VLTLVAPTLVGA*VERLQSNCLPY Trigger: GTAGGGAAGACAGTTTGACTGAAGACGTTCCACCCAAGCCCCCACCAAGGTTGGTGCGACGAGCGTCAGAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS CAA 72 bp | AAGACTGTGCCGCCTGCGAATCAGGATCTCCTTGGCTaGCCTCTCGCTTGTGTCTGCCGTCAGGTTGTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: KTVPPANQDLLG*PLACVCRQVVS Trigger: AGACACAACCTGACGGCAGACACAAGCGAGAGGCAAGCCAAGGAGATCCTGATTCGCAGGCGGCACAGTCTT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS CAA 72 bp | GTTGAAGTGGAAGCCCTGCGCTCGCGGTTTGAGCTGTaGTCTTTCCTGAGACTTTCCCGAAGACTGTGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: VEVEALRSRFEL*SFLRLSRRLCR Trigger: GCGGCACAGTCTTCGGGAAAGTCTCAGGAAAGACAACAGCTCAAACCGCGAGCGCAGGGCTTCCACTTCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS CAA 72 bp | GGTTCTGACGCTCGTCGCACCAACCTTGGTGGGGGCTaGGGTGGAACGTCTTCAGTCAAACTGTCTTCCCTA | + |
|
Preference number: 6 (lower is better) Translates to: GSDARRTNLGGG*GGTSSVKLSSL Trigger: TAGGGAAGACAGTTTGACTGAAGACGTTCCACCCAAGCCCCCACCAAGGTTGGTGCGACGAGCGTCAGAACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS TCA 72 bp | AAGGTTAGCGGGATGGTCCGGAACCAGTTAATCACCTaGGTCAGGACAAAGACGCCCAGTGCTCGCCAGATC | + |
|
Preference number: 6 (lower is better) Translates to: KVSGMVRNQLIT*VRTKTPSARQI Trigger: GATCTGGCGAGCACTGGGCGTCTTTGTCCTGACTCAGGTGATTAACTGGTTCCGGACCATCCCGCTAACCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS GCA 72 bp | GACCCGGATGTTGTGTGTGAAACGGGTGGTAAACGCTaGTATGAATCCCAGGAGGATGCCAATCAGCACCCC | + |
|
Preference number: 6 (lower is better) Translates to: DPDVVCETGGKR*YESQEDANQHP Trigger: GGGGTGCTGATTGGCATCCTCCTGGGATTCATAGCAGCGTTTACCACCCGTTTCACACACAACATCCGGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027231.13 ENSMUST00000192345.2 |
||
| CDS GCA 72 bp | GAGCTGTTGTCTTTCCTGAGACTTTCCCGAAGACTGTaGCGCCTGCGAATCAGGATCTCCTTGGCTTGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: ELLSFLRLSRRL*RLRIRISLACL Trigger: GAGGCAAGCCAAGGAGATCCTGATTCGCAGGCGGCACAGTCTTCGGGAAAGTCTCAGGAAAGACAACAGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS CAA 90 bp | ACTTTCCCGAAGACTGTGCCGCCTGCGAATCAGGATCTCCTTGGCTaGCCTCTCGCTTGTGTCTGCCGTCAGGTTGTGTCTGTTATAGGA | + |
|
Preference number: 6 (lower is better) Translates to: TFPKTVPPANQDLLG*PLACVCRQVVSVIG Trigger: TCCTATAACAGACACAACCTGACGGCAGACACAAGCGAGAGGCAAGCCAAGGAGATCCTGATTCGCAGGCGGCACAGTCTTCGGGAAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS CAA 72 bp | GCCTGCGAATCAGGATCTCCTTGGCTTGCCTCTCGCTaGTGTCTGCCGTCAGGTTGTGTCTGTTATAGGACA | + |
|
Preference number: 6 (lower is better) Translates to: ACESGSPWLASR*CLPSGCVCYRT Trigger: TGTCCTATAACAGACACAACCTGACGGCAGACACAAGCGAGAGGCAAGCCAAGGAGATCCTGATTCGCAGGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
||
| CDS TCA 72 bp | CTTCCATTCCATTTTGTAGGCCTGGGAGGCTTTCTTTaGGAACTGATCTGGCAAGAAGCGCCTGGTCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: LPFHFVGLGGFL*ELIWQEAPGPG Trigger: CCCAGGACCAGGCGCTTCTTGCCAGATCAGTTCTCAAAGAAAGCCTCCCAGGCCTACAAAATGGAATGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| CDS GCA 72 bp | AATCAGGATCTCCTTGGCTTGCCTCTCGCTTGTGTCTaGCGTCAGGTTGTGTCTGTTATAGGACAAGGTCCG | + |
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Preference number: 6 (lower is better) Translates to: NQDLLGLPLACV*RQVVSVIGQGP Trigger: CGGACCTTGTCCTATAACAGACACAACCTGACGGCAGACACAAGCGAGAGGCAAGCCAAGGAGATCCTGATT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| CDS CAA 90 bp | CCACCTCGTTCTTCCATTCCATTTTGTAGGCCTGGGAGGCTTTCTTaGAGAACTGATCTGGCAAGAAGCGCCTGGTCCTGGGCTGCAAAT | + |
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Preference number: 6 (lower is better) Translates to: PPRSSIPFCRPGRLS*RTDLARSAWSWAAN Trigger: ATTTGCAGCCCAGGACCAGGCGCTTCTTGCCAGATCAGTTCTCAAAGAAAGCCTCCCAGGCCTACAAAATGGAATGGAAGAACGAGGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| CDS TCA 72 bp | CAATCTTGGCCAAGGAGGCCAGTAGGATCCACAAAGTaGTCTCGAAAGGGATTTGCACGTGGGGGTAATCCA | + |
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Preference number: 6 (lower is better) Translates to: QSWPRRPVGSTK*SRKGFARGGNP Trigger: TGGATTACCCCCACGTGCAAATCCCTTTCGAGATCACTTTGTGGATCCTACTGGCCTCCTTGGCCAAGATTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027231.13 ENSMUST00000192345.2 |
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| CDS CAA 72 bp | TCTTCCATTCCATTTTGTAGGCCTGGGAGGCTTTCTTaGAGAACTGATCTGGCAAGAAGCGCCTGGTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: SSIPFCRPGRLS*RTDLARSAWSW Trigger: CCAGGACCAGGCGCTTCTTGCCAGATCAGTTCTCAAAGAAAGCCTCCCAGGCCTACAAAATGGAATGGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| CDS CAA 90 bp | GCAAACACGTCTACGGTCTGGATGGTTTTCATCTGGCAGAAGGACTaGAACAAGTTGTACAGGACCACTGTGACTGCATCGTTGAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: ANTSTVWMVFIWQKD*NKLYRTTVTASLSR Trigger: TCTGCTCAACGATGCAGTCACAGTGGTCCTGTACAACTTGTTCAAGTCCTTCTGCCAGATGAAAACCATCCAGACCGTAGACGTGTTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027231.13 ENSMUST00000192345.2 |
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| CDS GCA 72 bp | ACAAAGACACCCCAATGCCAATGGAATTCCACAGTGTaGCTACCACAGCATACCAGAAAATGGTGCCGAAGT | + |
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Preference number: 6 (lower is better) Translates to: TKTPQCQWNSTV*LPQHTRKWCRS Trigger: ACTTCGGCACCATTTTCTGGTATGCTGTGGTAGGCACACTGTGGAATTCCATTGGCATTGGGGTGTCTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027231.13 ENSMUST00000192345.2 |
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| CDS CCA 72 bp | AAGAAGTTAGCGATGCCAGCAAACACGTCTACGGTCTaGATGGTTTTCATCTGGCAGAAGGACTTGAACAAG | + |
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Preference number: 6 (lower is better) Translates to: KKLAMPANTSTV*MVFIWQKDLNK Trigger: CTTGTTCAAGTCCTTCTGCCAGATGAAAACCATCCAGACCGTAGACGTGTTTGCTGGCATCGCTAACTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027231.13 ENSMUST00000192345.2 |
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| CDS CAA 72 bp | TGGATGGTTTTCATCTGGCAGAAGGACTTGAACAAGTaGTACAGGACCACTGTGACTGCATCGTTGAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: WMVFIWQKDLNK*YRTTVTASLSR Trigger: TCTGCTCAACGATGCAGTCACAGTGGTCCTGTACAACTTGTTCAAGTCCTTCTGCCAGATGAAAACCATCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027231.13 ENSMUST00000192345.2 |
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| CDS CCA 72 bp | TCTCAAGCTTTTTATATAAGGACACAATACTGGACTTaGGTTGGTTTTCCCGAATCAGAAGCTTCCGAAGGT | + |
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Preference number: 6 (lower is better) Translates to: SQAFYIRTQYWT*VGFPESEASEG Trigger: ACCTTCGGAAGCTTCTGATTCGGGAAAACCAACCCAAGTCCAGTATTGTGTCCTTATATAAAAAGCTTGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| CDS CAA 72 bp | ATCTCAAGCTTTTTATATAAGGACACAATACTGGACTaGGGTTGGTTTTCCCGAATCAGAAGCTTCCGAAGG | + |
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Preference number: 6 (lower is better) Translates to: ISSFLYKDTILD*GWFSRIRSFRR Trigger: CCTTCGGAAGCTTCTGATTCGGGAAAACCAACCCAAGTCCAGTATTGTGTCCTTATATAAAAAGCTTGAGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| CDS CAA 90 bp | GCATGCTTTATCTCAAGCTTTTTATATAAGGACACAATACTGGACTaGGGTTGGTTTTCCCGAATCAGAAGCTTCCGAAGGTATTTGTCA | + |
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Preference number: 6 (lower is better) Translates to: ACFISSFLYKDTILD*GWFSRIRSFRRYLS Trigger: TGACAAATACCTTCGGAAGCTTCTGATTCGGGAAAACCAACCCAAGTCCAGTATTGTGTCCTTATATAAAAAGCTTGAGATAAAGCATGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| CDS CCA 72 bp | AGCTTTTTATATAAGGACACAATACTGGACTTGGGTTaGTTTTCCCGAATCAGAAGCTTCCGAAGGTATTTG | + |
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Preference number: 6 (lower is better) Translates to: SFLYKDTILDLG*FSRIRSFRRYL Trigger: CAAATACCTTCGGAAGCTTCTGATTCGGGAAAACCAACCCAAGTCCAGTATTGTGTCCTTATATAAAAAGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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| CDS CCA 72 bp | GCTTTATCTCAAGCTTTTTATATAAGGACACAATACTaGACTTGGGTTGGTTTTCCCGAATCAGAAGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: ALSQAFYIRTQY*TWVGFPESEAS Trigger: GGAAGCTTCTGATTCGGGAAAACCAACCCAAGTCCAGTATTGTGTCCTTATATAAAAAGCTTGAGATAAAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027231.13 |
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